TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012883.2.1
(1189 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR687852.1|DR687852 EST1077935 Normalized pine embryo li... 357 e-100
gb|DT637416.1|DT637416 EST1152347 Normalized pine embryo li... 270 4e-087
gb|DR386049.1|DR386049 RTHG1_12_D02.g1_A029 Roots plus adde... 249 2e-065
gb|DR011057.1|DR011057 HEAT1_3_C08.b1_A029 Root at 37 C for... 240 1e-062
gb|CF475384.1|CF475384 RTWW2_13_E10.g1_A021 Well-watered lo... 211 5e-057
gb|DR095417.1|DR095417 STRR1_20_H04.g1_A033 Stem Response R... 218 7e-056
gb|BQ697862.1|BQ697862 NXPV_061_G08_F NXPV (Nsf Xylem Plani... 215 4e-055
gb|DR054232.1|DR054232 RTCA1_16_B11.b1_A029 Roots minus cal... 215 4e-055
gb|BX253975.1|BX253975 BX253975 Pinus pinaster differenciat... 213 2e-054
gb|DR692052.1|DR692052 EST1082139 Normalized pine embryo li... 200 7e-054
gb|DR011118.1|DR011118 HEAT1_3_C08.g1_A029 Root at 37 C for... 132 3e-047
gb|DR688624.1|DR688624 EST1078709 Normalized pine embryo li... 169 2e-045
gb|DR684271.1|DR684271 EST1074348 Normalized pine embryo li... 169 2e-044
gb|BQ696246.1|BQ696246 NXPV_037_A11_F NXPV (Nsf Xylem Plani... 171 1e-041
gb|BQ697281.1|BQ697281 NXPV_055_C04_F NXPV (Nsf Xylem Plani... 170 2e-041
gb|DR385984.1|DR385984 RTHG1_12_D02.b1_A029 Roots plus adde... 165 7e-040
gb|DR689207.1|DR689207 EST1079293 Normalized pine embryo li... 127 8e-036
gb|DT635187.1|DT635187 EST1150118 Normalized pine embryo li... 149 5e-035
gb|BF220997.1|BF220997 NXCI_153_F06_F NXCI (Nsf Xylem Compr... 136 1e-034
gb|BQ701526.1|BQ701526 NXSI_065_F04_F NXSI (Nsf Xylem Side ... 145 5e-034
gb|DR693064.1|DR693064 EST1083152 Normalized pine embryo li... 131 1e-029
gb|DR055172.1|DR055172 RTCA1_22_B04.b1_A029 Roots minus cal... 125 7e-028
gb|BF777950.1|BF777950 NXSI_079_C02_F NXSI (Nsf Xylem Side ... 114 1e-024
gb|DR686700.1|DR686700 EST1076778 Normalized pine embryo li... 84 5e-023
gb|DR686598.1|DR686598 EST1076676 Normalized pine embryo li... 106 2e-022
gb|DR054303.1|DR054303 RTCA1_16_B11.g1_A029 Roots minus cal... 95 3e-022
gb|CF475324.1|CF475324 RTWW2_13_E10.b1_A021 Well-watered lo... 103 3e-021
>gb|DR687852.1|DR687852 EST1077935 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX34 3' end, mRNA sequence
Length = 837
Score = 357 bits (773), Expect(2) = e-100
Identities = 153/238 (64%), Positives = 189/238 (79%)
Frame = +1 / +3
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
++DF K+V IE ++ KL+ L KL A+EES VTKAS+MKAIKQRMEKD+DEVGKIA
Sbjct: 123 MEDFFKQVKEIEKLMEKLNKQLQKLQDAHEESKSVTKASAMKAIKQRMEKDVDEVGKIAR 302
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQX 561
K K++ L+ DN++NR+KPGC KG++VDRSR T +KKKLK+RM DFQTLR+ I++
Sbjct: 303 NIKQKLESLDTDNVANRKKPGCEKGTSVDRSRMTMTTTLKKKLKDRMSDFQTLRQMIQEE 482
Query: 562 XXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDA 741
FTVTG + DEETID LIETG SEQIF+ AIQ QGRG+I+DT+AEIQ RHDA
Sbjct: 483 YREVVERRVFTVTGTKADEETIDRLIETGDSEQIFQKAIQEQGRGRIMDTLAEIQGRHDA 662
Query: 742 VRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQR 915
VRD+E+KLL+LQQIF+DMAVLVE+QGDM++NIETHVSNA +H+Q G ALQ AK LQR
Sbjct: 663 VRDIEKKLLDLQQIFLDMAVLVESQGDMLDNIETHVSNAVDHVQSGTVALQKAKTLQR 836
Score = 259 bits (560), Expect(2) = 2e-069
Identities = 134/235 (57%), Positives = 145/235 (61%)
Frame = -3 / -3
Query: 911 CSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTASC 732
C AF A P C W AFET VSML MSPC ST TA+S ICC SRSF S SLTASC
Sbjct: 832 CRVLAF*RATVPDCTWSTAFET*VSMLSSMSPCDSTSTAISKKICCRSRSFFSMSLTASC 653
Query: 731 RSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCL 552
R ISA VS I P P IA NICSL P S +PVTVKTL STTSRYS
Sbjct: 652 RP*ISAKVSMIRPRPCS*IAFWNICSLSPVSIKRSIVSSSAFVPVTVKTLRSTTSRYSS* 473
Query: 551 IASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAI 372
I L V*KS +RSFNFFF V+ +RST PF HPGF L LS+S S+F AI
Sbjct: 472 IICLSV*KSDMRSFNFFFKVVVIVIRERSTLVPFSHPGFFLLATLSVSRDSSFCLILRAI 293
Query: 371 FPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKS 207
FPTSS SFS+RCLIAF+ AFVT DSS A S N SF+I SI+ T KKS
Sbjct: 292 FPTSSTSFSMRCLIAFIADAFVTDLDSSCAS*SFCNCLFSFSINFSISFTCLKKS 128
Score = 179 bits (386), Expect = 3e-044
Identities = 93/237 (39%), Positives = 127/237 (53%)
Frame = -2 / -2
Query: 915 PLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXXXXX*IPYSI 736
PL L +L+ L++V + ++ +V+ HVSL LN++ H+ E + I
Sbjct: 836 PL*SLGLLKSNSP*LHMVHSI*NVSFNVIKHVSL*LNQHSHIQENLLQIKKLFLNVSDGI 657
Query: 735 MSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLSILL 556
MS L V +S+L+L+S+ EYLLT GLYQ INCLFI S+ KN SF+ SI L
Sbjct: 656 MSPLNLC*GVHDPSSTLLLNSLLEYLLTIPGLYQAINCLFIGLRPSHCKNSSFNYFSIFL 477
Query: 555 PDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRS 376
+ + LKI H L F +++ TSRFL + VI + F L + S
Sbjct: 476 LNHLPECLKIRHAVL*LFFQGGSHCHSRAINTGAFLTSRFLSVGYVICIKRFKFLLDIAS 297
Query: 375 NFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIF 205
NF HFI+IFLH L NCFH C CN GFL+C +L+Q QL + N L +EIF
Sbjct: 296 NFSHFIHIFLHALFNCFHSRCLCNRLGFLVCILKLLQLFIQLFHQLFNFFHLFKEIF 126
Score = 31.3 bits (62), Expect(2) = e-100
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 100 MNNLLTDSFELPRRDSSRDA 159
MN+LL DS ELPR + RDA
Sbjct: 12 MNDLLADSVELPRMGAYRDA 71
Score = 24.4 bits (47), Expect(2) = 2e-069
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1 / -1
Query: 184 PDAFPFQYLRLLRSPAEGAQRNP 116
P + P + L + P GAQ+NP
Sbjct: 96 PKSLPQDLMHLCKPPFWGAQQNP 28
>gb|DT637416.1|DT637416 EST1152347 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH337 3' end, mRNA sequence
Length = 901
Score = 270 bits (583), Expect(4) = 4e-087
Identities = 116/189 (61%), Positives = 145/189 (76%)
Frame = +1 / +2
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
++DF K+V IE ++ KL+ L KL A+EES VTKAS+MKAIKQRMEKD+DEVGKIA
Sbjct: 167 MEDFFKQVKEIEKLMEKLNKQLQKLQDAHEESKSVTKASAMKAIKQRMEKDVDEVGKIAR 346
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQX 561
K K++ L+ DN++NR+KPGC KG++VDRSR T +KKKLK+RM DFQTLR+ I++
Sbjct: 347 NIKQKLESLDADNVANRKKPGCEKGTSVDRSRMTMTTTLKKKLKDRMSDFQTLRQMIQEE 526
Query: 562 XXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDA 741
FTVTG + DEETID LIETG SEQIF+ AIQ QGRG+I+DT+AEIQERHDA
Sbjct: 527 YREVVERRVFTVTGTKADEETIDRLIETGDSEQIFQKAIQEQGRGRIMDTLAEIQERHDA 706
Query: 742 VRDLERKLL 768
VRD+E+ L
Sbjct: 707 VRDIEKSFL 733
Score = 193 bits (415), Expect(4) = 2e-059
Identities = 104/187 (55%), Positives = 114/187 (60%)
Frame = -3 / -2
Query: 767 RSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVK 588
+ S SLTASCRS ISA VS I P P IA NICSL P S +PVTVK
Sbjct: 732 KKLFSMSLTASCRS*ISAKVSMIRPRPCS*IAFWNICSLSPVSIKRSIVSSSAFVPVTVK 553
Query: 587 TLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLS 408
TL STTSRYS I L V*KS +RSFNFFF V+ +RST PF HPGF L LS S
Sbjct: 552 TLRSTTSRYSS*IICLSV*KSDMRSFNFFFKVVVIVIRERSTLVPFSHPGFFLLATLSAS 373
Query: 407 SSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIA 228
S+F AIFPTSS SFS+RCLIAF+ AFVT DSS A S N SF+I SI+
Sbjct: 372 RDSSFCLILRAIFPTSSTSFSMRCLIAFIADAFVTDLDSSCAS*SFCNCLFSFSINFSIS 193
Query: 227 STFFKKS 207
T KKS
Sbjct: 192 FTCLKKS 172
Score = 159 bits (342), Expect = 3e-038
Identities = 79/178 (44%), Positives = 100/178 (56%)
Frame = -2 / -1
Query: 738 IMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLSIL 559
IMSLL V +S+L+L+S+ EYLLT GLYQ INCLFI S+ KN SF+ SI
Sbjct: 703 IMSLLNLC*GVHDPSSTLLLNSLLEYLLTIPGLYQAINCLFIGLRPSHCKNSSFNYFSIF 524
Query: 558 LPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLR 379
L + + LKI H L F +++ TSRFL + VI + F L +
Sbjct: 523 LLNHLPECLKIRHAVL*LFFQGGSHCHSRAINTGAFLTSRFLSVGYVICIKRFKFLLDIA 344
Query: 378 SNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIF 205
SNF HFI+IFLH L NCFH C CN GFL+C +L+Q QL + N L +EIF
Sbjct: 343 SNFSHFIHIFLHALFNCFHSRCLCNRLGFLVCILKLLQLFIQLFHQLFNFFHLFKEIF 170
Score = 57.4 bits (119), Expect(4) = 4e-087
Identities = 23/28 (82%), Positives = 28/28 (100%)
Frame = +1 / +1
Query: 760 KLLELQQIFMDMAVLVEAQGDMINNIET 843
KLL+LQQIF+DMAVLVE+QGDM++NIET
Sbjct: 724 KLLDLQQIFLDMAVLVESQGDMLDNIET 807
Score = 47.8 bits (98), Expect(4) = 2e-059
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -3 / -3
Query: 842 VSMLLIMSPCASTRTAMSMNICCNSRSF 759
VSML MSPC ST TA+S ICC SRSF
Sbjct: 806 VSMLSSMSPCDSTSTAISKKICCRSRSF 723
Score = 31.3 bits (62), Expect(4) = 4e-087
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 100 MNNLLTDSFELPRRDSSRDA 159
MN+LL DS ELPR + RDA
Sbjct: 56 MNDLLADSVELPRMGAYRDA 115
Score = 24.4 bits (47), Expect(4) = 2e-059
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 184 PDAFPFQYLRLLRSPAEGAQRNP 116
P + P + L + P GAQ+NP
Sbjct: 140 PKSLPQDLMHLCKPPFWGAQQNP 72
Score = 22.1 bits (42), Expect(4) = 4e-087
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1 / +3
Query: 847 VSNATNHIQQGV 882
VSNA +H+Q G+
Sbjct: 810 VSNAVDHVQSGL 845
Score = 22.1 bits (42), Expect(4) = 2e-059
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3 / -1
Query: 881 TPCCMWLVAFET 846
+P C W AFET
Sbjct: 844 SPDCTWSTAFET 809
>gb|DR386049.1|DR386049 RTHG1_12_D02.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_12_D02_A029 5', mRNA sequence
Length = 816
Score = 249 bits (539), Expect = 2e-065
Identities = 110/246 (44%), Positives = 164/246 (66%)
Frame = +1 / +3
Query: 97 AMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKL 276
AMN+LL+ +F + ++ + M D NL F +V I++ + ++ LL K+
Sbjct: 78 AMNDLLSRTFSREKETFDIESGGGVEMAAMDPEKNLTPFFSEVSLIKAEMEQIRQLLLKV 257
Query: 277 XTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKG 456
ANEES +TKA +MK++++RM++D+ ++ K A K K++EL+R NLS+R PGCG+G
Sbjct: 258 KEANEESKTITKAQAMKSLRERMDRDVVQILKKAKFIKAKLEELDRANLSSRGIPGCGQG 437
Query: 457 SAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDL 636
S+ DR+R TT ++ LK+ M +FQ+LR+ I +TVTG R DEETID +
Sbjct: 438 SSTDRTRIATTNGLRNSLKKLMVEFQSLRQNIMGEYKETVERRYYTVTGERADEETIDHI 617
Query: 637 IETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQ 816
IETG+SE + + AIQ QGRGQI++ + EIQERHD V+++E+ LLEL QIF+DMAVLV+ Q
Sbjct: 618 IETGESENMLQRAIQEQGRGQIIEVIREIQERHDTVKEIEKNLLEL*QIFLDMAVLVQTQ 797
Query: 817 GDMINN 834
G ++N
Sbjct: 798 GQELDN 815
Score = 128 bits (275), Expect = 6e-029
Identities = 80/179 (44%), Positives = 88/179 (49%)
Frame = -3 / -3
Query: 818 PCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLFPXX 639
PC TRTAMS IC NS F S S T SC S IS S I PLP IA N+ SL P
Sbjct: 799 PCVCTRTAMSRKICYNSSKFFSISFTVSCLS*ISRITSIICPLPCS*IALCNMFSLSPVS 620
Query: 638 XXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTA 459
S PVTV LLST S YS +I L++ S+I F F VV S
Sbjct: 619 II*SMVSSSALSPVTV*YLLSTVSLYSPMIFCLRLWNSTINFFREFLKPLVVAMRVLSVE 440
Query: 458 EPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFA 282
P PHPG DRL+LSSSS F A F + S S+R L FM A V SS A
Sbjct: 439 LPCPHPGIPRLDRLALSSSSNFALMNFAFFRICTTSLSMRSLRDFMA*ALVIVLLSSLA 263
>gb|DR011057.1|DR011057 HEAT1_3_C08.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_C08_A029 3', mRNA sequence
Length = 712
Score = 240 bits (519), Expect = 1e-062
Identities = 98/199 (49%), Positives = 142/199 (71%)
Frame = +1 / -1
Query: 340 RMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKER 519
RM+KD+ EV K A K K++ L+R N+++R+ GC +G+ DR+R T +++KKLK+
Sbjct: 712 RMDKDVVEVLKKAKLVKGKLEALDRANVASRRLLGCEEGTPTDRTRTSITNSLRKKLKDS 533
Query: 520 MDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQ 699
M +FQ LR+ I + +TG DE+T++ ++ TG+SE I + AIQ QGRG+
Sbjct: 532 MGEFQMLRQKIMGEYRDTVQRRLYNITGEYADEDTLEKIVSTGESENILQKAIQEQGRGR 353
Query: 700 ILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQG 879
IL+T+ EIQERHDAV+++ER LLEL Q+F+DMAVLVEAQG+ +NNIE +V+NA+N+++ G
Sbjct: 352 ILETIHEIQERHDAVKEIERSLLELHQVFLDMAVLVEAQGEQLNNIEYNVANASNYVEHG 173
Query: 880 VSALQNAKKLQRNSRKWMC 936
L AKK Q+ SRKWMC
Sbjct: 172 TKQLYTAKKHQKRSRKWMC 116
Score = 124 bits (265), Expect = 1e-027
Identities = 77/188 (40%), Positives = 93/188 (49%)
Frame = -3 / +3
Query: 905 FFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTASCRS 726
FFA S L PC L A T S+LL SPCAST TA+S C+S S SLTASCRS
Sbjct: 147 FFAV*SCLVPCST*LEALATLYSILLSCSPCASTSTAISRKT*CSSSKLRSISLTASCRS 326
Query: 725 CISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIA 546
CIS VS I P P W+A + SL P S PV + +L T S YS +I
Sbjct: 327 CISWIVSRIRPRPCSWMAFWRMFSLSPVETIFSSVSSSAYSPVIL*SLR*TVSLYSPIIF 506
Query: 545 SLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFP 366
L +* S I S +FF V+ L S P HP L+LS +S+ A
Sbjct: 507 CLNI*NSPIESLSFFRRLFVMEVLVLSVGVPSSHPSNLRLATLALSRASSLPLTSLAFLR 686
Query: 365 TSSISFSI 342
TS+ S S+
Sbjct: 687 TSTTSLSM 710
>gb|CF475384.1|CF475384 RTWW2_13_E10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_13_E10_A021 5', mRNA sequence
Length = 703
Score = 211 bits (455), Expect(2) = 5e-057
Identities = 92/155 (59%), Positives = 115/155 (74%)
Frame = +1 / +3
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
++DF K+V IE ++ KL+ L KL A+EES VTKAS+MKAIKQRMEKD+DEVGKIA
Sbjct: 237 MEDFFKQVKEIEKLMEKLNKQLQKLQDAHEESKSVTKASAMKAIKQRMEKDVDEVGKIAR 416
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQX 561
K K++ L+ DN++NR+KPGC KG++VDRSR T +KKKLK+RM DFQTLR+ I++
Sbjct: 417 NIKQKLESLDADNVANRKKPGCEKGTSVDRSRMTMTTTLKKKLKDRMSDFQTLRQMIQEE 596
Query: 562 XXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIF 666
FTVTG + DEETID LIETG SEQIF
Sbjct: 597 YREVVERRVFTVTGTKADEETIDRLIETGDSEQIF 701
Score = 162 bits (349), Expect(2) = 2e-040
Identities = 85/153 (55%), Positives = 94/153 (61%)
Frame = -3 / -1
Query: 665 NICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPV 486
NICSL P S +PVTVKTL STTSRYS I L V*KS +RSFNFFF V
Sbjct: 700 NICSLSPVSIKRSIVSSSAFVPVTVKTLRSTTSRYSS*IICLSV*KSDMRSFNFFFKVVV 521
Query: 485 VCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFV 306
+ +RST PF HPGF L LS S S+F AIFPTSS SFS+RCLIAF+ AFV
Sbjct: 520 IVIRERSTLVPFSHPGFFLLATLSASRDSSFCLILRAIFPTSSTSFSMRCLIAFIADAFV 341
Query: 305 TXXDSSFAVWSLFNRFDSFAIILSIASTFFKKS 207
T DSS A S N SF+I SI+ T KKS
Sbjct: 340 TDLDSSCAS*SFCNCLFSFSINFSISFTCLKKS 242
Score = 145 bits (311), Expect = 6e-034
Identities = 69/154 (44%), Positives = 85/154 (55%)
Frame = -2 / -3
Query: 666 EYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXX 487
EYLLT GLYQ INCLFI S+ KN SF+ SI L + + LKI H L F
Sbjct: 701 EYLLTIPGLYQAINCLFIGLRPSHCKNSSFNYFSIFLLNHLPECLKIRHAVL*LFFQGGS 522
Query: 486 XXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFC 307
+++ TSRFL + VI + F L + SNF HFI+IFLH L NCFH C C
Sbjct: 521 HCHSRAINTGAFLTSRFLSVGYVICIKRFKFLLDIASNFSHFIHIFLHALFNCFHSRCLC 342
Query: 306 NXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIF 205
N GFL+C +L+Q QL + N L +EIF
Sbjct: 341 NRLGFLVCILKLLQLFIQLFHQLFNFFHLFKEIF 240
Score = 31.3 bits (62), Expect(2) = 5e-057
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 100 MNNLLTDSFELPRRDSSRDA 159
MN+LL DS ELPR + RDA
Sbjct: 126 MNDLLADSVELPRMGAYRDA 185
Score = 24.4 bits (47), Expect(2) = 2e-040
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1 / -2
Query: 184 PDAFPFQYLRLLRSPAEGAQRNP 116
P + P + L + P GAQ+NP
Sbjct: 210 PKSLPQDLMHLCKPPFWGAQQNP 142
>gb|DR095417.1|DR095417 STRR1_20_H04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_H04_A033 5', mRNA sequence
Length = 808
Score = 218 bits (470), Expect = 7e-056
Identities = 86/176 (48%), Positives = 126/176 (71%)
Frame = +1 / -2
Query: 409 ERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXX 588
+R N+++R+ GC +G+ DR+R T +++KKLK+ M +FQ LR+ I
Sbjct: 807 DRANVASRRLLGCEEGTPTDRTRTSITNSLRKKLKDSMGEFQILRQKIMGEYRDTVQRRL 628
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
+ +TG DE+T++ ++ TG+SE I + IQ QGRG+IL+T+ EIQERHDAV+++ER LL
Sbjct: 627 YNITGEYADEDTLEKIVSTGESENILQKVIQEQGRGRILETIHEIQERHDAVKEIERSLL 448
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
EL Q+F+DMAVLVEAQG+ +NNIE +V+NA+N+++ G L AKK Q+ SRKWMC
Sbjct: 447 ELHQVFLDMAVLVEAQGEQLNNIEYNVANASNYVEHGTKQLYTAKKHQKRSRKWMC 280
Score = 117 bits (251), Expect = 1e-025
Identities = 71/166 (42%), Positives = 83/166 (50%)
Frame = -3 / +2
Query: 905 FFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTASCRS 726
FFA S L PC L A T S+LL SPCAST TA+S C+S S SLTASCRS
Sbjct: 311 FFAV*SCLVPCST*LEALATLYSILLSCSPCASTSTAISRKT*CSSSKLRSISLTASCRS 490
Query: 725 CISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIA 546
CIS VS I P P W+ + SL P S PV + +L T S YS +I
Sbjct: 491 CISWIVSRIRPRPCSWMTFWRMFSLSPVETIFSSVSSSAYSPVIL*SLR*TVSLYSPIIF 670
Query: 545 SLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLS 408
LK+* S I S +FF V+ L S P HP L+LS
Sbjct: 671 CLKI*NSPIESLSFFRRLFVMEVLVLSVGVPSSHPSNLRLATLALS 808
>gb|BQ697862.1|BQ697862 NXPV_061_G08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_061_G08 5' similar to Arabidopsis
thaliana sequence At5g08080 syntaxin-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 511
Score = 215 bits (465), Expect = 4e-055
Identities = 89/116 (76%), Positives = 103/116 (88%)
Frame = +1 / +3
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTG + DEETID LIETG SEQIF+ AIQ QGRG+I+DT+AEIQERHDAVRD+E+KLL
Sbjct: 42 FTVTGTKADEETIDRLIETGDSEQIFQKAIQEQGRGRIMDTLAEIQERHDAVRDIEKKLL 221
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
+LQQIF+DMAVLVE+QGDM++NIET VSNA +H+Q G ALQ AK LQRNSRKWMC
Sbjct: 222 DLQQIFLDMAVLVESQGDMLDNIETQVSNAVDHVQSGTVALQKAKTLQRNSRKWMC 389
Score = 150 bits (323), Expect = 1e-035
Identities = 75/123 (60%), Positives = 77/123 (62%)
Frame = -3 / -1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF C AF A P C W AFET VSML MSPC ST TA+S ICC SRSF S S
Sbjct: 379 FLEFRCRVLAF*RATVPDCTWSTAFET*VSMLSSMSPCDSTSTAISKKICCRSRSFFSMS 200
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
LTASCRS ISA VS I P P IA NICSL P S +PVTVKTL STTS
Sbjct: 199 LTASCRS*ISAKVSMIRPRPCS*IAFWNICSLSPVSIKRSIVSSSAFVPVTVKTLRSTTS 20
Query: 566 RYS 558
RYS
Sbjct: 19 RYS 11
Score = 103 bits (220), Expect = 2e-021
Identities = 54/127 (42%), Positives = 74/127 (58%)
Frame = -2 / -3
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXX 763
G AHPLP IPL L +L+ L++V + ++ +V+ HVSL LN++ H+ E
Sbjct: 395 GNAHPLP*IPL*SLGLLKSNSP*LHMVHSI*NLSFNVIKHVSL*LNQHSHIQENLLQIKK 216
Query: 762 XXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNP 583
+ IMSLL V +S+L+L+S+ EYLLT GLYQ INCLFI S+ KN
Sbjct: 215 LFLNVSDGIMSLLNLC*GVHDPSSTLLLNSLLEYLLTIPGLYQAINCLFIGLRPSHCKNS 36
Query: 582 SFDNLSI 562
SF+ SI
Sbjct: 35 SFNYFSI 15
>gb|DR054232.1|DR054232 RTCA1_16_B11.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_16_B11_A029 3', mRNA sequence
Length = 805
Score = 215 bits (465), Expect = 4e-055
Identities = 89/116 (76%), Positives = 103/116 (88%)
Frame = +1 / +3
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTG + DEETID LIETG SEQIF+ AIQ QGRG+I+DT+AEIQERHDAVRD+E+KLL
Sbjct: 48 FTVTGTKADEETIDRLIETGDSEQIFQKAIQEQGRGRIMDTLAEIQERHDAVRDIEKKLL 227
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
+LQQIF+DMAVLVE+QGDM++NIET VSNA +H+Q G ALQ AK LQRNSRKWMC
Sbjct: 228 DLQQIFLDMAVLVESQGDMLDNIETQVSNAVDHVQSGTVALQKAKTLQRNSRKWMC 395
Score = 150 bits (323), Expect = 1e-035
Identities = 75/123 (60%), Positives = 77/123 (62%)
Frame = -3 / -1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF C AF A P C W AFET VSML MSPC ST TA+S ICC SRSF S S
Sbjct: 385 FLEFRCRVLAF*RATVPDCTWSTAFET*VSMLSSMSPCDSTSTAISKKICCRSRSFFSMS 206
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
LTASCRS ISA VS I P P IA NICSL P S +PVTVKTL STTS
Sbjct: 205 LTASCRS*ISAKVSMIRPRPCS*IAFWNICSLSPVSIKRSIVSSSAFVPVTVKTLRSTTS 26
Query: 566 RYS 558
RYS
Sbjct: 25 RYS 17
Score = 105 bits (224), Expect = 6e-022
Identities = 55/129 (42%), Positives = 75/129 (58%)
Frame = -2 / -3
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEYXXXXXX 763
G AHPLP IPL L +L+ L++V + ++ +V+ HVSL LN++ H+ E
Sbjct: 401 GNAHPLP*IPL*SLGLLKSNSP*LHMVHSI*NLSFNVIKHVSL*LNQHSHIQENLLQIKK 222
Query: 762 XXX*IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNP 583
+ IMSLL V +S+L+L+S+ EYLLT GLYQ INCLFI S+ KN
Sbjct: 221 LFLNVSDGIMSLLNLC*GVHDPSSTLLLNSLLEYLLTIPGLYQAINCLFIGLRPSHCKNS 42
Query: 582 SFDNLSILL 556
SF+ SI L
Sbjct: 41 SFNYFSIFL 15
>gb|BX253975.1|BX253975 BX253975 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP091F01, mRNA sequence
Length = 522
Score = 213 bits (460), Expect = 2e-054
Identities = 88/116 (75%), Positives = 102/116 (87%)
Frame = +1 / +2
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTG + DEETID LIETG SEQIF+ AIQ QGRG+I+DT+AEIQERHDAVRD+E+KLL
Sbjct: 11 FTVTGTKADEETIDRLIETGDSEQIFQKAIQEQGRGRIMDTLAEIQERHDAVRDIEKKLL 190
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
+L QIF+DMAVLVE+QGDM++NIET VSNA +H+Q G ALQ AK LQRNSRKWMC
Sbjct: 191 DLHQIFLDMAVLVESQGDMLDNIETQVSNAVDHVQSGTVALQKAKTLQRNSRKWMC 358
Score = 125 bits (268), Expect = 5e-028
Identities = 65/115 (56%), Positives = 68/115 (59%)
Frame = -3 / -1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF C+ AF A P C W A ET VSML MSPC ST TA+S I C SRSF S S
Sbjct: 348 FLEFRCNVLAF*RATVPDCTWSTALET*VSMLSSMSPCDSTSTAISKKI*CRSRSFFSMS 169
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTL 582
LTASCRS ISA VS I P P IA ICSL P S +PVTVKTL
Sbjct: 168 LTASCRS*ISAKVSMIRPRPCS*IAFWKICSLSPVSIKRSIVSSSAFVPVTVKTL 4
>gb|DR692052.1|DR692052 EST1082139 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADH41 3' end, mRNA sequence
Length = 642
Score = 200 bits (432), Expect(2) = 7e-054
Identities = 87/149 (58%), Positives = 110/149 (73%)
Frame = +1 / +3
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
++DF K+V IE ++ KL+ L KL A+EES VTKAS+MKAIKQRMEKD+DEVGKIA
Sbjct: 159 MEDFFKQVKEIEKLMEKLNKQLQKLQDAHEESKSVTKASAMKAIKQRMEKDVDEVGKIAR 338
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQX 561
K K++ L+ DN++NR+KPGC KG++VDRSR T +KKKLK+RM DFQTLR+ I++
Sbjct: 339 NIKQKLESLDADNVANRKKPGCEKGTSVDRSRMTMTTTLKKKLKDRMSDFQTLRQMIQEE 518
Query: 562 XXXXXXXXXFTVTGNRPDEETIDDLIETG 648
FTVTG + DEETID LIETG
Sbjct: 519 YREVVERRVFTVTGTKADEETIDRLIETG 605
Score = 152 bits (326), Expect(2) = 2e-037
Identities = 78/133 (58%), Positives = 87/133 (65%)
Frame = -3 / -3
Query: 605 LPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLF 426
+PVTVKTL STTSRYS I L V*KS +RSFNFFF V+ +RST PF HPGF L
Sbjct: 562 VPVTVKTLRSTTSRYSS*IICLSV*KSDMRSFNFFFKVVVIVIRERSTLVPFSHPGFFLL 383
Query: 425 DRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFA 246
LS S S+F AIFPTSS SFS+RCLIAF+ AFVT DSS A S N SF+
Sbjct: 382 ATLSASRDSSFCLILRAIFPTSSTSFSMRCLIAFIADAFVTDLDSSCAS*SFCNCLFSFS 203
Query: 245 IILSIASTFFKKS 207
I SI+ T KKS
Sbjct: 202 INFSISFTCLKKS 164
Score = 134 bits (287), Expect = 1e-030
Identities = 64/147 (43%), Positives = 80/147 (54%)
Frame = -2 / -2
Query: 645 GLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSV 466
GLYQ INCLFI S+ KN SF+ SI L + + LKI H L F ++
Sbjct: 602 GLYQAINCLFIGLRPSHCKNSSFNYFSIFLLNHLPECLKIRHAVL*LFFQGGSHCHSRAI 423
Query: 465 HGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLI 286
+ TSRFL + VI + F L + SNF HFI+IFLH L NCFH C CN GFL+
Sbjct: 422 NTGAFLTSRFLSVGYVICIKRFKFLLDIASNFSHFIHIFLHALFNCFHSRCLCNRLGFLV 243
Query: 285 CSXELIQ*I*QLCNYTLNCIDLLQEIF 205
C +L+Q QL + N L +EIF
Sbjct: 242 CILKLLQLFIQLFHQLFNFFHLFKEIF 162
Score = 31.3 bits (62), Expect(2) = 7e-054
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 100 MNNLLTDSFELPRRDSSRDA 159
MN+LL DS ELPR + RDA
Sbjct: 48 MNDLLADSVELPRMGAYRDA 107
Score = 24.4 bits (47), Expect(2) = 2e-037
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1 / -1
Query: 184 PDAFPFQYLRLLRSPAEGAQRNP 116
P + P + L + P GAQ+NP
Sbjct: 132 PKSLPQDLMHLCKPPFWGAQQNP 64
>gb|DR011118.1|DR011118 HEAT1_3_C08.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_C08_A029 5', mRNA sequence
Length = 792
Score = 132 bits (283), Expect(2) = 3e-047
Identities = 51/81 (62%), Positives = 68/81 (83%)
Frame = +1 / -3
Query: 694 GQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQ 873
G+IL+T+ EIQERHDAV+++ER LLEL Q+F+DMAVLVEAQG+ +NNIE +V+NA+N+++
Sbjct: 508 GRILETIHEIQERHDAVKEIERSLLELHQVFLDMAVLVEAQGEQLNNIEYNVANASNYVE 329
Query: 874 QGVSALQNAKKLQRNSRKWMC 936
G L AKK Q+ SRKWMC
Sbjct: 328 HGTKQLYTAKKHQKRSRKWMC 266
Score = 77.6 bits (163), Expect(2) = 3e-047
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = +1 / -2
Query: 451 KGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETID 630
+G+ DR+R T +++KKLK+ M +FQ LR+ I + +TG DE+T++
Sbjct: 752 EGTPTDRTRTSITNSLRKKLKDSMGEFQMLRQKIMGEYRDTVQRRLYNITGEYADEDTLE 573
Query: 631 DLIETGKSEQIFKDAIQHQGR 693
++ TG+SE I + AIQ QGR
Sbjct: 572 KIVSTGESENILQKAIQEQGR 510
>gb|DR688624.1|DR688624 EST1078709 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC849 3' end, mRNA sequence
Length = 859
Score = 169 bits (363), Expect(2) = 2e-045
Identities = 78/198 (39%), Positives = 121/198 (61%)
Frame = +1 / +2
Query: 97 AMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKL 276
AMN+LL+ +F + ++ + M D NL F +V I++ + ++ LL K+
Sbjct: 92 AMNDLLSRTFSREKETFDIESGGGVEMAAMDPERNLTPFFSEVSLIKAEMEQIRQLLLKV 271
Query: 277 XTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKG 456
ANEES +TKA +MK++++RM++D+ ++ K K K++EL+R NLS+R PGCG+G
Sbjct: 272 KEANEESKTITKAQAMKSLRERMDRDVVQILKKVKFIKAKLEELDRANLSSRGIPGCGQG 451
Query: 457 SAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDL 636
S+ DR+R TT ++ LK+ M +FQ+LR+ I +TVTG R DEETID +
Sbjct: 452 SSSDRTRIATTNGLRNSLKKLMVEFQSLRQNIMGEYKETVERRYYTVTGERADEETIDHI 631
Query: 637 IETGKSEQIFKDAIQHQG 690
IETG+SE + + AI G
Sbjct: 632 IETGESENMLQRAISRTG 685
Score = 77.1 bits (162), Expect(2) = 4e-025
Identities = 53/132 (40%), Positives = 61/132 (46%)
Frame = -3 / -2
Query: 677 IASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFF 498
IA N+ SL P S PVTV LLST S YS +I L++ S+I F F
Sbjct: 672 IALCNMFSLSPVSII*SMVSSSALSPVTV*YLLSTVSLYSPMIFCLRLWNSTINFFREFL 493
Query: 497 TAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFME 318
VV S P PHPG DRL+LSSSS F F + S S+R L FM
Sbjct: 492 KPLVVAMRVLSEELPCPHPGIPRLDRLALSSSSNFALMNFTFFRICTTSLSMRSLRDFMA 313
Query: 317 LAFVTXXDSSFA 282
A V SS A
Sbjct: 312 *ALVIVLLSSLA 277
Score = 58.3 bits (121), Expect(2) = 4e-025
Identities = 26/43 (60%), Positives = 26/43 (60%)
Frame = -3 / -1
Query: 815 CASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP 687
C TRTAMS ICCNS F S S T SC S IS S I PLP
Sbjct: 811 CVCTRTAMSRKICCNSSKFFSISFTVSCLS*ISRITSIICPLP 683
Score = 35.0 bits (70), Expect(2) = 2e-045
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2 / +1
Query: 686 REEARY*TLLLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLR 811
R E R ++++ DM L* R + W+C+R+S TW F R
Sbjct: 682 RGEGRLLK*SVRFKRDMTL*KRSRRTCWNCSRFSLTWLFWCR 807
>gb|DR684271.1|DR684271 EST1074348 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAQ79 3' end, mRNA sequence
Length = 731
Score = 169 bits (363), Expect(2) = 2e-044
Identities = 73/132 (55%), Positives = 95/132 (71%)
Frame = +1 / +3
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
++DF K+V IE ++ KL+ L K A+EES VTKAS+MKAIKQRMEKD+DEVGKIA
Sbjct: 336 MEDFFKQVKEIEKLMEKLNKQLQKFQDAHEESKSVTKASAMKAIKQRMEKDVDEVGKIAR 515
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQX 561
K K++ L+ DN++NR+KPGC KG++VDRSR T +KKKLK+RM DFQTLR+ I++
Sbjct: 516 NIKQKLESLDADNVANRKKPGCEKGTSVDRSRMTMTTTLKKKLKDRMSDFQTLRQMIQEE 695
Query: 562 XXXXXXXXXFTV 597
FTV
Sbjct: 696 YREVVERRVFTV 731
Score = 145 bits (311), Expect(2) = 3e-035
Identities = 75/130 (57%), Positives = 84/130 (64%)
Frame = -3 / -2
Query: 596 TVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRL 417
TVKTL STTSRYS I L V*KS +RSFNFFF V+ +RST PF HPGF L L
Sbjct: 730 TVKTLRSTTSRYSS*IICLSV*KSDMRSFNFFFKVVVIVIRERSTLVPFSHPGFFLLATL 551
Query: 416 SLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIIL 237
S S S+F AIFPTSS SFS+RCLIAF+ AFVT DSS A + N SF+I
Sbjct: 550 SASRDSSFCLILRAIFPTSSTSFSMRCLIAFIADAFVTDLDSSCAS*NFCNCLFSFSINF 371
Query: 236 SIASTFFKKS 207
SI+ T KKS
Sbjct: 370 SISFTCLKKS 341
Score = 107 bits (229), Expect = 1e-022
Identities = 52/131 (39%), Positives = 68/131 (51%)
Frame = -2 / -1
Query: 597 YSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*V 418
+ KN SF+ SI L + + LKI H L F +++ TSRFL + V
Sbjct: 731 HCKNSSFNYFSIFLLNHLPECLKIRHAVL*LFFQGGSHCHSRAINTGAFLTSRFLSVGYV 552
Query: 417 ISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYT 238
I + F L + SNF HFI+IFLH L NCFH C CN G L+C +L+Q QL +
Sbjct: 551 ICIKRFKFLLDIASNFSHFIHIFLHALFNCFHSRCLCNRLGLLVCILKLLQLFIQLFHQL 372
Query: 237 LNCIDLLQEIF 205
N L +EIF
Sbjct: 371 FNFFHLFKEIF 339
Score = 31.3 bits (62), Expect(2) = 2e-044
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 100 MNNLLTDSFELPRRDSSRDA 159
MN+LL DS ELPR + RDA
Sbjct: 225 MNDLLADSVELPRMGAYRDA 284
Score = 24.4 bits (47), Expect(2) = 3e-035
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 184 PDAFPFQYLRLLRSPAEGAQRNP 116
P + P + L + P GAQ+NP
Sbjct: 309 PKSLPQDLMHLCKPPFWGAQQNP 241
>gb|BQ696246.1|BQ696246 NXPV_037_A11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_037_A11 5' similar to Arabidopsis
thaliana sequence At5g08080 syntaxin-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 345
Score = 171 bits (367), Expect = 1e-041
Identities = 72/101 (71%), Positives = 86/101 (85%)
Frame = +1 / +3
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTG + DEETID LIETG SEQIF+ AIQ QGRG+I+DT+AEIQERHDAVRD+E+KLL
Sbjct: 42 FTVTGTKADEETIDRLIETGDSEQIFQKAIQEQGRGRIMDTLAEIQERHDAVRDIEKKLL 221
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSAL 891
+LQQIF+DMAVLVE+ DM++NIET SNA +H+Q AL
Sbjct: 222 DLQQIFLDMAVLVESXXDMLDNIETXXSNAVDHVQSXTVAL 344
Score = 127 bits (273), Expect = 1e-028
Identities = 64/105 (60%), Positives = 66/105 (62%)
Frame = -3 / -3
Query: 872 CMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWP 693
C W AFE VSML MS C ST TA+S ICC SRSF S SLTASCRS ISA VS I P
Sbjct: 325 CTWSTAFEXXVSMLSSMSXCDSTSTAISKKICCRSRSFFSMSLTASCRS*ISAKVSMIRP 146
Query: 692 LP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYS 558
P IA NICSL P S +PVTVKTL STTSRYS
Sbjct: 145 RPCS*IAFWNICSLSPVSIKRSIVSSSAFVPVTVKTLRSTTSRYS 11
>gb|BQ697281.1|BQ697281 NXPV_055_C04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_055_C04 5' similar to Arabidopsis
thaliana sequence At3g03800 s-syntaxin-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 345
Score = 170 bits (365), Expect = 2e-041
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +1 / +3
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FTVTG DEETID LIETG SEQIF+ AI Q R I+DT+AEIQ RHDAVRD+E+KLL
Sbjct: 42 FTVTGTNADEETIDRLIETGDSEQIFQKAIHEQXRXXIMDTLAEIQXRHDAVRDIEKKLL 221
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSAL 891
+LQQIF+DMAVLVE+QGDM++NIETHVSNA +H+Q AL
Sbjct: 222 DLQQIFLDMAVLVESQGDMLDNIETHVSNAVDHVQSXTVAL 344
Score = 88.6 bits (187), Expect(2) = 9e-025
Identities = 40/58 (68%), Positives = 41/58 (70%)
Frame = -3 / -3
Query: 872 CMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSI 699
C W AFET VSML MSPC ST TA+S ICC SRSF S SLTASCR ISA VS I
Sbjct: 325 CTWSTAFET*VSMLSSMSPCDSTSTAISKKICCRSRSFFSMSLTASCRX*ISAKVSMI 152
Score = 46.0 bits (94), Expect(2) = 9e-025
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = -3 / -3
Query: 677 IASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYS 558
IA NICSL P S +PVTVKTL STTSRYS
Sbjct: 130 IAFWNICSLSPVSIKRSIVSSSAFVPVTVKTLRSTTSRYS 11
>gb|DR385984.1|DR385984 RTHG1_12_D02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_12_D02_A029 3', mRNA sequence
Length = 764
Score = 165 bits (354), Expect = 7e-040
Identities = 65/116 (56%), Positives = 89/116 (76%)
Frame = +1 / +3
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
+TVTG R DEETID +IETG+SE + + AIQ QGRGQI++ + EIQERHD V+++E+ LL
Sbjct: 30 YTVTGERADEETIDHIIETGESENMLQRAIQEQGRGQIIEVIREIQERHDTVKEIEKNLL 209
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
EL QIF+DMAVLV+ QG ++NIE +V A + ++ G L+ A+ LQ+N+RKW C
Sbjct: 210 EL*QIFLDMAVLVQTQGQELDNIEANVGRANSFVEGGTRKLRKARNLQKNTRKWTC 377
>gb|DR689207.1|DR689207 EST1079293 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACF47 3' end, mRNA sequence
Length = 833
Score = 127 bits (273), Expect(2) = 8e-036
Identities = 58/152 (38%), Positives = 96/152 (63%)
Frame = +1 / +3
Query: 97 AMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKL 276
AMN+LL+ +F + ++ + M D NL F +V I++ + ++ L K+
Sbjct: 237 AMNDLLSRTFSREKETFDIESGGGVEMAAMDPEKNLTPFFSEVSLIKAEMEQIRQLPLKV 416
Query: 277 XTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKG 456
ANEES +TKA +MK++++RM++D+ ++ K A K K++EL+R NLS+R PGCG+G
Sbjct: 417 KEANEESKTITKAQAMKSLRERMDRDVVQILKKAKFIKAKLEELDRANLSSRGIPGCGQG 596
Query: 457 SAVDRSREQTTGAVKKKLKERMDDFQTLREAI 552
S+ DR+R TT ++ LK+ M +FQ+LR+ I
Sbjct: 597 SSTDRTRIATTNGLRNSLKKLMVEFQSLRQNI 692
Score = 43.7 bits (89), Expect(2) = 8e-036
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSE 657
+TVTG R DEETID +IETG+SE
Sbjct: 727 YTVTGERADEETIDHIIETGESE 795
>gb|DT635187.1|DT635187 EST1150118 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGE12 3' end, mRNA sequence
Length = 782
Score = 149 bits (319), Expect = 5e-035
Identities = 69/178 (38%), Positives = 108/178 (60%)
Frame = +1 / +2
Query: 97 AMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKL 276
AMN+LL+ +F + ++ + M D NL F +V I++ + ++ L K+
Sbjct: 245 AMNDLLSRTFSREKETFDIESGGGVEMAAMDPEKNLTPFFSEVSLIKAEMEQIRQLPLKV 424
Query: 277 XTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKG 456
ANEES +TKA +MK++++RM++D+ ++ K A K K++EL+R NLS+R PGCG+G
Sbjct: 425 KEANEESKTITKAQAMKSLRERMDRDVVQILKKAKFIKAKLEELDRANLSSRGIPGCGQG 604
Query: 457 SAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETID 630
S+ DR+R TT ++ LK+ M +FQ+LR+ I +TVTG R DEETID
Sbjct: 605 SSTDRTRIATTNGLRNSLKKLMVEFQSLRQNIMGEYKETVERRYYTVTGERADEETID 778
>gb|BF220997.1|BF220997 NXCI_153_F06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_153_F06 5' similar to Arabidopsis
thaliana sequence At5g08080 syntaxin-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 425
Score = 136 bits (291), Expect(2) = 1e-034
Identities = 59/103 (57%), Positives = 75/103 (72%)
Frame = +1 / +3
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
++DF K+V IE ++ KL+ L KL A+EES VTKAS+MKAIKQRMEKD+DEVGKIA
Sbjct: 117 MEDFFKQVKEIEKLMEKLNKQLQKLQDAHEESKSVTKASAMKAIKQRMEKDVDEVGKIAR 296
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKL 510
K K++ L+ DN+ NR+KPGC +VDRSR T +KKKL
Sbjct: 297 NIKQKLESLDADNVXNRKKPGCEXXXSVDRSRMTMTTTLKKKL 425
Score = 100 bits (214), Expect(2) = 4e-022
Identities = 53/101 (52%), Positives = 60/101 (59%)
Frame = -3 / -2
Query: 509 NFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLI 330
NFFF V+ +RST HPGF L LS S S+F AIFPTSS SFS+RCLI
Sbjct: 424 NFFFKVVVIVIRERSTLXXXSHPGFFLLXTLSASRDSSFCLILRAIFPTSSTSFSMRCLI 245
Query: 329 AFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKS 207
AF+ AFVT DSS A S N SF+I SI+ T KKS
Sbjct: 244 AFIADAFVTDLDSSCAS*SFCNCLFSFSINFSISFTCLKKS 122
Score = 31.3 bits (62), Expect(2) = 1e-034
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 100 MNNLLTDSFELPRRDSSRDA 159
MN+LL DS ELPR + RDA
Sbjct: 6 MNDLLADSVELPRMGAYRDA 65
Score = 24.4 bits (47), Expect(2) = 4e-022
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 184 PDAFPFQYLRLLRSPAEGAQRNP 116
P + P + L + P GAQ+NP
Sbjct: 90 PKSLPQDLMHLCKPPFWGAQQNP 22
>gb|BQ701526.1|BQ701526 NXSI_065_F04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_065_F04 5' similar to Arabidopsis thaliana
sequence At1g61290 similar to syntaxin-related protein
knolle see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 380
Score = 145 bits (312), Expect = 5e-034
Identities = 61/123 (49%), Positives = 82/123 (66%)
Frame = +1 / +1
Query: 511 KERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQG 690
K+ M +FQ+LR+ + FT+TG EETI+ +I TG+SE + AIQ QG
Sbjct: 1 KDLMGEFQSLRQKVAGEYRETIERRYFTITGENASEETIEKIISTGESETFLQKAIQEQG 180
Query: 691 RGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHI 870
RGQILDT+ EIQERHDA + +E+ LLEL QIF+DMAVLV + +N+IE HV +A N++
Sbjct: 181 RGQILDTIHEIQERHDAAKXIEKSLLELHQIFLDMAVLVXXXXEQLNDIEHHVIHAANYV 360
Query: 871 QQG 879
G
Sbjct: 361 XXG 369
>gb|DR693064.1|DR693064 EST1083152 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADT95 3' end, mRNA sequence
Length = 695
Score = 131 bits (280), Expect = 1e-029
Identities = 59/152 (38%), Positives = 97/152 (63%)
Frame = +1 / +3
Query: 97 AMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKL 276
AMN+LL+ +F + ++ + M D NL F +V I++ + ++ LL K+
Sbjct: 228 AMNDLLSRTFSREKETFDIESGGGVEMAAIDPEKNLTPFFSEVSLIKAEMEQIRQLLLKV 407
Query: 277 XTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKG 456
ANEES +TKA +MK++++RM++D+ ++ K A K K++EL+R NLS+R PGCG+G
Sbjct: 408 KEANEESKTITKAQAMKSLRERMDRDVVQILKKAKFIKAKLEELDRANLSSRGIPGCGQG 587
Query: 457 SAVDRSREQTTGAVKKKLKERMDDFQTLREAI 552
S+ DR+R TT ++ LK+ M +FQ+LR+ I
Sbjct: 588 SSTDRTRIATTNGLRNSLKKLMVEFQSLRQNI 683
>gb|DR055172.1|DR055172 RTCA1_22_B04.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_22_B04_A029 3', mRNA sequence
Length = 761
Score = 125 bits (267), Expect = 7e-028
Identities = 48/77 (62%), Positives = 62/77 (80%)
Frame = +1 / +1
Query: 706 DTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVS 885
DT+ EIQERHDA +++E+ LLEL QIF+DMAVLVEAQG+ +N+IE HV +A N++ G
Sbjct: 1 DTIHEIQERHDAAKEIEKSLLELHQIFLDMAVLVEAQGEQLNDIEHHVIHAANYVDHGTK 180
Query: 886 ALQNAKKLQRNSRKWMC 936
L+ AKK QRN+RKWMC
Sbjct: 181 QLKGAKKYQRNTRKWMC 231
>gb|BF777950.1|BF777950 NXSI_079_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_079_C02 5' similar to Arabidopsis thaliana
sequence At3g03800 s-syntaxin-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 277
Score = 114 bits (244), Expect = 1e-024
Identities = 54/91 (59%), Positives = 60/91 (65%)
Frame = -3 / -3
Query: 605 LPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLF 426
+PVTVKTL S SRYS I L V*KS +RSFNFFF V+ +RST PF HPGF L
Sbjct: 275 VPVTVKTLRSXXSRYSXXIIXLSV*KSDMRSFNFFFKVVVIVIRERSTLVPFSHPGFFLL 96
Query: 425 DRLSLSSSSTFVFA*GAIFPTSSISFSIRCL 333
LS S S+F AIFPTSS SFS+RCL
Sbjct: 95 ATLSASRDSSFCLILRAIFPTSSTSFSMRCL 3
Score = 113 bits (242), Expect = 2e-024
Identities = 47/74 (63%), Positives = 58/74 (78%)
Frame = +1 / +1
Query: 331 IKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKL 510
IKQRMEKD+DEVGKIA K K++ L+ DN++NR+KPGC KG++VDRSR T +KKKL
Sbjct: 1 IKQRMEKDVDEVGKIARNIKQKLESLDADNVANRKKPGCEKGTSVDRSRMTMTTTLKKKL 180
Query: 511 KERMDDFQTLREAI 552
K+RM DFQTL I
Sbjct: 181 KDRMSDFQTLXXMI 222
>gb|DR686700.1|DR686700 EST1076778 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABI87 3' end, mRNA sequence
Length = 785
Score = 84.5 bits (178), Expect(2) = 5e-023
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +1 / +3
Query: 370 KIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREA 549
K A K K++ L++ N+++R+ PGCG+GS DR+R ++KKLK+ M +FQ LR+
Sbjct: 513 KKAKLIKGKLEALDKANIASRRLPGCGQGSPTDRTRTSIVNGLRKKLKDMMAEFQLLRQK 692
Query: 550 IRQXXXXXXXXXXFTVTGNRPDEETIDDLI 639
I + VTG + DEETI+++I
Sbjct: 693 IMAEHKETIGRRYYAVTGEQADEETIENMI 782
Score = 44.1 bits (90), Expect(2) = 5e-023
Identities = 19/73 (26%), Positives = 41/73 (56%)
Frame = +1 / +2
Query: 154 DADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAI 333
+A ++ M + NL F ++V+ +++ + + L KL ++EES + A ++K +
Sbjct: 296 EAGYDVEMVGINEEKNLGQFFEEVEDVKNDMESVEGLSRKLQASHEESKTIHNAKTIKNL 475
Query: 334 KQRMEKDIDEVGK 372
+ M+KD++ V K
Sbjct: 476 RDTMDKDVEVVLK 514
>gb|DR686598.1|DR686598 EST1076676 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABH75 3' end, mRNA sequence
Length = 714
Score = 106 bits (227), Expect = 2e-022
Identities = 47/150 (31%), Positives = 84/150 (56%)
Frame = +1 / +2
Query: 154 DADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAI 333
+A ++ M + NL F +V+ +++ + + L KL ++EES + A ++K +
Sbjct: 263 EAGYDVEMVGINEEKNLGQFFGEVEDVKNDMESVEGLSRKLQASHEESKTIHNAKTIKNL 442
Query: 334 KQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLK 513
+ M+KD++ V K A K K++ L++ N+++R+ PGCG+GS DR+R ++KKLK
Sbjct: 443 RDTMDKDVEAVLKKAKLIKGKLEALDKANIASRRLPGCGQGSPTDRTRTSIVNGLRKKLK 622
Query: 514 ERMDDFQTLREAIRQXXXXXXXXXXFTVTG 603
+ M +FQ LR+ I + VTG
Sbjct: 623 DMMAEFQLLRQKIMAEHKETIGRRYYAVTG 712
>gb|DR054303.1|DR054303 RTCA1_16_B11.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_16_B11_A029 5', mRNA sequence
Length = 560
Score = 94.5 bits (200), Expect(2) = 3e-022
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = +1 / +1
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
++DF K+V IE ++ KL+ L KL A+EES VTKAS+MKAIKQRMEKD+DEVGKIA
Sbjct: 349 MEDFFKQVKEIEKLMEKLNKQLQKLQDAHEESKSVTKASAMKAIKQRMEKDVDEVGKIAR 528
Query: 382 QAKTKVDELE 411
K K++ L+
Sbjct: 529 NIKQKLESLD 558
Score = 31.3 bits (62), Expect(2) = 3e-022
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 100 MNNLLTDSFELPRRDSSRDA 159
MN+LL DS ELPR + RDA
Sbjct: 238 MNDLLADSVELPRMGAYRDA 297
>gb|CF475324.1|CF475324 RTWW2_13_E10.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_13_E10_A021 3', mRNA sequence
Length = 563
Score = 103 bits (219), Expect = 3e-021
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +1 / +2
Query: 775 QQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
QQIF+DMAVLVE+QGDM++NIET VSNA +H+Q G ALQ AK LQRNSRKWMC
Sbjct: 2 QQIFLDMAVLVESQGDMLDNIETQVSNAVDHVQSGTVALQKAKTLQRNSRKWMC 163
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 561,165,478
Number of Sequences: 355925
Number of extensions: 7768864
Number of successful extensions: 65381
Number of sequences better than 1.0e-020: 32
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 18318108240
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)