TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969912.2.1
(507 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR691625.1|DR691625 EST1081712 Normalized pine embryo li... 116 2e-049
gb|DT634011.1|DT634011 EST1148942 Normalized pine embryo li... 116 2e-049
gb|CF394951.1|CF394951 RTDS2_8_G09.g1_A021 Drought-stressed... 116 2e-049
gb|CF397252.1|CF397252 RTDS3_2_E08.g1_A022 Drought-stressed... 116 2e-049
gb|CO201268.1|CO201268 RTCNT2_4_E02.g1_A029 Root control 2 ... 116 2e-049
gb|CF395125.1|CF395125 RTDS2_9_F12.g1_A021 Drought-stressed... 116 2e-049
gb|CF398940.1|CF398940 RTDS3_11_A07.g1_A022 Drought-stresse... 116 2e-049
gb|CV034689.1|CV034689 RTNACL1_10_H12.g1_A029 Roots plus ad... 116 5e-049
gb|DR160987.1|DR160987 RTFE1_9_E02.b1_A029 Roots minus iron... 112 7e-049
gb|DR743419.1|DR743419 RTCU1_15_F04.g1_A029 Roots plus adde... 112 7e-049
gb|CF396401.1|CF396401 RTDS2_21_A05.g1_A021 Drought-stresse... 112 7e-049
gb|BX250121.1|BX250121 BX250121 Pinus pinaster differenciat... 112 7e-049
gb|CF395959.1|CF395959 RTDS2_19_G12.g1_A021 Drought-stresse... 113 7e-049
gb|DR092019.1|DR092019 RTAL1_25_C12.g1_A029 Roots plus adde... 112 7e-049
gb|DR687130.1|DR687130 EST1077208 Normalized pine embryo li... 97 1e-043
gb|BX254376.1|BX254376 BX254376 Pinus pinaster differenciat... 112 1e-041
gb|DR694406.1|DR694406 EST1084498 Normalized pine embryo li... 112 2e-038
gb|BX680287.1|BX680287 BX680287 RS Pinus pinaster cDNA clon... 112 2e-038
gb|BQ699059.1|BQ699059 NXRV119_A02_F NXRV (Nsf Xylem Root w... 108 8e-038
gb|AW056441.1|AW056441 ST51H10 Pine TriplEx shoot tip libra... 68 8e-034
gb|DR683334.1|DR683334 EST1073410 Normalized pine embryo li... 107 1e-031
gb|DT631435.1|DT631435 EST1146366 Normalized pine embryo li... 107 1e-031
gb|CV034910.1|CV034910 RTNACL1_12_A02.g1_A029 Roots plus ad... 107 1e-031
gb|DR111138.1|DR111138 RTS1_15_D02.g1_A029 Roots minus sulf... 107 1e-031
gb|DT631025.1|DT631025 EST1145956 Normalized pine embryo li... 107 1e-031
gb|DR057944.1|DR057944 RTNIT1_8_F03.g1_A029 Roots minus nit... 98 5e-031
gb|CX648300.1|CX648300 COLD1_27_F09.g1_A029 Root cold Pinus... 98 5e-031
gb|CO365287.1|CO365287 RTK1_24_F09.g1_A029 Roots minus pota... 98 5e-031
gb|DT631006.1|DT631006 EST1145937 Normalized pine embryo li... 98 5e-031
gb|DR386518.1|DR386518 RTHG1_15_F01.g1_A029 Roots plus adde... 98 5e-031
gb|DR386833.1|DR386833 RTHG1_17_E10.g1_A029 Roots plus adde... 98 5e-031
gb|CV033145.1|CV033145 RTNACL1_20_D09.g1_A029 Roots plus ad... 98 5e-031
gb|CO158570.1|CO158570 FLD1_7_F06.g1_A029 Root flooded Pinu... 98 5e-031
gb|CF388989.1|CF388989 RTDR2_16_H07.g1_A021 Loblolly pine r... 98 5e-031
gb|CF671535.1|CF671535 RTCNT1_57_F03.g1_A029 Root control P... 98 5e-031
gb|DR682183.1|DR682183 EST1072258 Normalized pine embryo li... 98 5e-031
gb|CF388934.1|CF388934 RTDR2_16_A10.g1_A021 Loblolly pine r... 98 5e-031
gb|DR101229.1|DR101229 STRR1_71_A02.g1_A033 Stem Response R... 98 2e-030
gb|DT634174.1|DT634174 EST1149105 Normalized pine embryo li... 95 4e-030
gb|DR054652.1|DR054652 RTCA1_18_E03.g1_A029 Roots minus cal... 73 4e-030
gb|DR112145.1|DR112145 RTS1_26_E05.b1_A029 Roots minus sulf... 70 1e-029
gb|BX250949.1|BX250949 BX250949 Pinus pinaster differenciat... 103 1e-029
gb|DR048451.1|DR048451 RTBOR1_9_B07.b1_A029 Roots plus adde... 61 1e-029
gb|DT631243.1|DT631243 EST1146174 Normalized pine embryo li... 61 1e-029
gb|CV031653.1|CV031653 RTNACL1_2_H03.g1_A029 Roots plus add... 76 1e-029
gb|DR110492.1|DR110492 RTS1_11_E07.b1_A029 Roots minus sulf... 76 3e-029
gb|DR012735.1|DR012735 HEAT1_14_E06.g1_A029 Root at 37 C fo... 98 5e-029
gb|CF671510.1|CF671510 RTCNT1_57_C10.g1_A029 Root control P... 73 6e-029
gb|CF671834.1|CF671834 RTCNT1_59_C10.g1_A029 Root control P... 73 6e-029
gb|DR694679.1|DR694679 EST1084771 Normalized pine embryo li... 73 7e-029
gb|DT638830.1|DT638830 EST1153761 Normalized pine embryo li... 73 7e-029
gb|DR060449.1|DR060449 RTNIT1_27_H06.g1_A029 Roots minus ni... 74 1e-028
gb|DR687555.1|DR687555 EST1077637 Normalized pine embryo li... 88 5e-028
gb|DR059941.1|DR059941 RTNIT1_20_E06.g1_A029 Roots minus ni... 69 1e-027
gb|AY064169.1| Pinus taeda cinnamoyl-CoA reductase mRNA, co... 79 3e-027
gb|DR057407.1|DR057407 RTNIT1_5_D06.g1_A029 Roots minus nit... 79 3e-027
gb|DR160425.1|DR160425 RTFE1_5_H08.g1_A029 Roots minus iron... 79 3e-027
gb|DR094133.1|DR094133 STRR1_12_D11.g1_A033 Stem Response R... 79 3e-027
gb|DR054929.1|DR054929 RTCA1_20_B04.g1_A029 Roots minus cal... 79 3e-027
gb|DT632346.1|DT632346 EST1147277 Normalized pine embryo li... 76 1e-026
gb|CO167716.1|CO167716 FLD1_70_E10.g1_A029 Root flooded Pin... 76 1e-026
gb|DR094292.1|DR094292 STRR1_13_D10.g1_A033 Stem Response R... 75 4e-026
gb|DR018755.1|DR018755 STRS1_25_B05.g1_A034 Shoot tip pitch... 75 4e-026
gb|CF670155.1|CF670155 RTCNT1_48_A05.g1_A029 Root control P... 75 4e-026
gb|DR097150.1|DR097150 STRR1_32_G10.g1_A033 Stem Response R... 75 4e-026
gb|CF477062.1|CF477062 RTWW3_5_A08.g1_A022 Well-watered lob... 75 4e-026
gb|CF385232.1|CF385232 RTDR1_2_C01.g1_A015 Loblolly pine ro... 75 4e-026
gb|CX652266.1|CX652266 COLD1_58_B06.b1_A029 Root cold Pinus... 75 4e-026
gb|CX652430.1|CX652430 COLD1_59_B07.b1_A029 Root cold Pinus... 75 4e-026
gb|CN785248.1|CN785248 EST783939 Sequencing ESTs from loblo... 71 4e-026
gb|CO409612.1|CO409612 EST839997 Sequencing ESTs from loblo... 71 5e-026
gb|CO414009.1|CO414009 EST844394 Sequencing ESTs from loblo... 71 5e-026
gb|CN784341.1|CN784341 EST783032 Sequencing ESTs from loblo... 70 7e-026
gb|DT627000.1|DT627000 EST1160076 Sequencing ESTs from lobl... 70 7e-026
gb|DN463220.1|DN463220 EST959019 Sequencing ESTs from loblo... 70 7e-026
gb|DN456906.1|DN456906 EST952705 Sequencing ESTs from loblo... 70 7e-026
gb|DN462788.1|DN462788 EST958587 Sequencing ESTs from loblo... 70 7e-026
gb|CO412312.1|CO412312 EST842697 Sequencing ESTs from loblo... 70 7e-026
gb|DN460900.1|DN460900 EST956699 Sequencing ESTs from loblo... 70 7e-026
gb|DN460913.1|DN460913 EST956712 Sequencing ESTs from loblo... 70 7e-026
gb|CV148239.1|CV148239 EST859448 Sequencing ESTs from loblo... 70 7e-026
gb|DN458545.1|DN458545 EST954344 Sequencing ESTs from loblo... 70 7e-026
gb|DN460280.1|DN460280 EST956079 Sequencing ESTs from loblo... 70 7e-026
gb|CV137776.1|CV137776 EST848985 Sequencing ESTs from loblo... 70 7e-026
gb|DN463360.1|DN463360 EST959159 Sequencing ESTs from loblo... 70 7e-026
gb|DN462360.1|DN462360 EST958159 Sequencing ESTs from loblo... 70 7e-026
gb|DN461905.1|DN461905 EST957704 Sequencing ESTs from loblo... 70 7e-026
gb|DN454416.1|DN454416 EST950215 Sequencing ESTs from loblo... 70 7e-026
gb|DN453168.1|DN453168 EST948967 Sequencing ESTs from loblo... 70 7e-026
gb|CO413247.1|CO413247 EST843632 Sequencing ESTs from loblo... 70 7e-026
gb|DN459569.1|DN459569 EST955368 Sequencing ESTs from loblo... 70 7e-026
gb|DN448821.1|DN448821 EST944620 Sequencing ESTs from loblo... 70 7e-026
gb|DR019220.1|DR019220 STRS1_28_C05.g1_A034 Shoot tip pitch... 75 1e-025
gb|DR068936.1|DR068936 RTDK1_3_F07.g1_A029 Roots, dark Pinu... 74 1e-025
gb|CN785011.1|CN785011 EST783702 Sequencing ESTs from loblo... 69 1e-025
gb|CV137760.1|CV137760 EST848969 Sequencing ESTs from loblo... 69 1e-025
gb|AW056808.1|AW056808 ST56D11 Pine TriplEx shoot tip libra... 116 1e-025
gb|CF473096.1|CF473096 RTDS1_1_A02.g1_A015 Drought-stressed... 50 2e-025
gb|DN449774.1|DN449774 EST945573 Sequencing ESTs from loblo... 69 2e-025
gb|DN449731.1|DN449731 EST945530 Sequencing ESTs from loblo... 69 2e-025
gb|DN445947.1|DN445947 EST941746 Sequencing ESTs from loblo... 69 2e-025
gb|DR054152.1|DR054152 RTCA1_15_C04.g1_A029 Roots minus cal... 50 2e-025
gb|DR180257.1|DR180257 RTMNUT1_27_B01.g1_A029 Roots minus m... 50 2e-025
gb|CF470763.1|CF470763 RTDS1_14_F01.g1_A015 Drought-stresse... 72 2e-025
gb|BX678316.1|BX678316 BX678316 RN Pinus pinaster cDNA clon... 69 2e-025
gb|CV137890.1|CV137890 EST849099 Sequencing ESTs from loblo... 70 2e-025
gb|DR053077.1|DR053077 RTCA1_8_H03.g1_A029 Roots minus calc... 50 3e-025
gb|CX713210.1|CX713210 RTPQ1_7_E01.g1_A032 Roots treated wi... 50 3e-025
gb|DR161109.1|DR161109 RTFE1_9_H08.g1_A029 Roots minus iron... 50 3e-025
gb|CN784374.1|CN784374 EST783065 Sequencing ESTs from loblo... 69 3e-025
gb|CV145536.1|CV145536 EST856745 Sequencing ESTs from loblo... 69 3e-025
gb|CO411248.1|CO411248 EST841633 Sequencing ESTs from loblo... 69 3e-025
gb|DN450004.1|DN450004 EST945803 Sequencing ESTs from loblo... 69 3e-025
gb|CV138658.1|CV138658 EST849867 Sequencing ESTs from loblo... 69 3e-025
gb|DN463454.1|DN463454 EST959253 Sequencing ESTs from loblo... 69 3e-025
gb|CO411906.1|CO411906 EST842291 Sequencing ESTs from loblo... 69 3e-025
gb|CO410821.1|CO410821 EST841206 Sequencing ESTs from loblo... 69 3e-025
gb|DT625803.1|DT625803 EST1157727 Sequencing ESTs from lobl... 69 3e-025
gb|CV137035.1|CV137035 EST848244 Sequencing ESTs from loblo... 69 3e-025
gb|DN450870.1|DN450870 EST946669 Sequencing ESTs from loblo... 69 3e-025
gb|DN458694.1|DN458694 EST954493 Sequencing ESTs from loblo... 69 3e-025
gb|CV144792.1|CV144792 EST856001 Sequencing ESTs from loblo... 69 3e-025
gb|CV143361.1|CV143361 EST854570 Sequencing ESTs from loblo... 69 3e-025
gb|CV147100.1|CV147100 EST858309 Sequencing ESTs from loblo... 69 3e-025
gb|DN458275.1|DN458275 EST954074 Sequencing ESTs from loblo... 69 3e-025
gb|DN463025.1|DN463025 EST958824 Sequencing ESTs from loblo... 69 3e-025
gb|DN449562.1|DN449562 EST945361 Sequencing ESTs from loblo... 69 3e-025
gb|DN454745.1|DN454745 EST950544 Sequencing ESTs from loblo... 69 3e-025
gb|DN463580.1|DN463580 EST959379 Sequencing ESTs from loblo... 69 3e-025
gb|DN460464.1|DN460464 EST956263 Sequencing ESTs from loblo... 69 3e-025
gb|CO410129.1|CO410129 EST840514 Sequencing ESTs from loblo... 69 3e-025
gb|DN455600.1|DN455600 EST951399 Sequencing ESTs from loblo... 69 3e-025
gb|DN464551.1|DN464551 EST960350 Sequencing ESTs from loblo... 69 3e-025
gb|DN447074.1|DN447074 EST942873 Sequencing ESTs from loblo... 68 3e-025
gb|CV137369.1|CV137369 EST848578 Sequencing ESTs from loblo... 69 3e-025
gb|CV138609.1|CV138609 EST849818 Sequencing ESTs from loblo... 69 3e-025
gb|CN784725.1|CN784725 EST783416 Sequencing ESTs from loblo... 69 3e-025
gb|DN459551.1|DN459551 EST955350 Sequencing ESTs from loblo... 69 3e-025
gb|DN456885.1|DN456885 EST952684 Sequencing ESTs from loblo... 69 3e-025
gb|DN456609.1|DN456609 EST952408 Sequencing ESTs from loblo... 69 3e-025
gb|DN447159.1|DN447159 EST942958 Sequencing ESTs from loblo... 69 3e-025
gb|CO411436.1|CO411436 EST841821 Sequencing ESTs from loblo... 68 3e-025
gb|DN461879.1|DN461879 EST957678 Sequencing ESTs from loblo... 69 3e-025
gb|DN445907.1|DN445907 EST941706 Sequencing ESTs from loblo... 69 3e-025
gb|DR744404.1|DR744404 RTCU1_22_F03.b1_A029 Roots plus adde... 50 3e-025
dbj|BD224405.1| Materials and methods for the modification ... 50 3e-025
gb|DN447290.1|DN447290 EST943089 Sequencing ESTs from loblo... 69 3e-025
dbj|BD224337.1| Materials and methods for the modification ... 50 3e-025
gb|CX652971.1|CX652971 COLD1_62_D02.g1_A029 Root cold Pinus... 50 3e-025
gb|CX650133.1|CX650133 COLD1_43_E10.g1_A029 Root cold Pinus... 50 3e-025
gb|DR744289.1|DR744289 RTCU1_21_A12.g1_A029 Roots plus adde... 50 3e-025
gb|CX651050.1|CX651050 COLD1_49_G02.g1_A029 Root cold Pinus... 50 3e-025
gb|CF386582.1|CF386582 RTDR1_15_F07.g1_A015 Loblolly pine r... 71 4e-025
gb|CR393786.1|CR393786 CR393786 RN Pinus pinaster cDNA clon... 71 4e-025
gb|AW064693.1|AW064693 ST34F04 Pine TriplEx shoot tip libra... 51 7e-025
gb|CO413818.1|CO413818 EST844203 Sequencing ESTs from loblo... 68 8e-025
gb|DT626015.1|DT626015 EST1157939 Sequencing ESTs from lobl... 68 8e-025
gb|CV139165.1|CV139165 EST850374 Sequencing ESTs from loblo... 68 8e-025
gb|CV145718.1|CV145718 EST856927 Sequencing ESTs from loblo... 68 8e-025
gb|DN447726.1|DN447726 EST943525 Sequencing ESTs from loblo... 68 8e-025
gb|CO198015.1|CO198015 GEO1_10_E09.g1_A029 Root gravitropis... 52 8e-025
gb|DR168830.1|DR168830 RTPHOS1_28_D08.b1_A029 Roots minus p... 52 8e-025
gb|CO368195.1|CO368195 RTK1_39_E03.b1_A029 Roots minus pota... 76 1e-024
gb|DR094713.1|DR094713 STRR1_16_F12.b1_A033 Stem Response R... 98 1e-024
gb|CF479486.1|CF479486 RTWW3_22_E09.g1_A022 Well-watered lo... 83 1e-024
gb|AL750306.1|AL750306 AL750306 RN Pinus pinaster cDNA clon... 112 1e-024
gb|AL750309.1|AL750309 AL750309 RN Pinus pinaster cDNA clon... 112 1e-024
gb|AL750311.1|AL750311 AL750311 RN Pinus pinaster cDNA clon... 112 1e-024
gb|AL750312.1|AL750312 AL750312 RN Pinus pinaster cDNA clon... 112 1e-024
gb|BF610086.1|BF610086 NXSI_054_E12_F NXSI (Nsf Xylem Side ... 112 1e-024
gb|DN610926.1|DN610926 EST963976 Subtracted pine embryo lib... 112 1e-024
gb|DT628027.1|DT628027 EST1156776 Subtracted pine embryo li... 112 1e-024
gb|DR061216.1|DR061216 RTNIT1_32_G04.g1_A029 Roots minus ni... 75 1e-024
gb|CO163978.1|CO163978 FLD1_45_B08.b1_A029 Root flooded Pin... 76 2e-024
gb|CN785095.1|CN785095 EST783786 Sequencing ESTs from loblo... 69 3e-024
gb|DN463641.1|DN463641 EST959440 Sequencing ESTs from loblo... 69 3e-024
gb|DR014483.1|DR014483 HEAT1_49_F08.g1_A029 Root at 37 C fo... 69 3e-024
gb|DR743848.1|DR743848 RTCU1_18_B11.g1_A029 Roots plus adde... 69 3e-024
gb|CO369443.1|CO369443 RTK1_47_E02.b1_A029 Roots minus pota... 69 3e-024
gb|DR110207.1|DR110207 RTS1_9_C04.g1_A029 Roots minus sulfu... 69 3e-024
gb|DT627416.1|DT627416 EST1160492 Sequencing ESTs from lobl... 69 3e-024
gb|DR116711.1|DR116711 RTMG1_2_G06.b1_A029 Roots minus magn... 69 3e-024
gb|CX647613.1|CX647613 COLD1_18_H06.b1_A029 Root cold Pinus... 69 3e-024
gb|DR167455.1|DR167455 RTPHOS1_18_H07.g1_A029 Roots minus p... 69 3e-024
gb|DR059636.1|DR059636 RTNIT1_18_G09.g1_A029 Roots minus ni... 69 3e-024
gb|DR079510.1|DR079510 RTFEPL1_11_E12.g1_A029 Roots plus ad... 69 3e-024
gb|DR023260.1|DR023260 STRS1_56_A12.g1_A034 Shoot tip pitch... 69 3e-024
gb|CF668268.1|CF668268 RTCNT1_35_A08.g1_A029 Root control P... 69 3e-024
gb|DR161392.1|DR161392 RTFE1_11_C01.g1_A029 Roots minus iro... 69 3e-024
gb|CF386315.1|CF386315 RTDR1_13_E07.g1_A015 Loblolly pine r... 69 3e-024
gb|CF386631.1|CF386631 RTDR1_15_F11.g1_A015 Loblolly pine r... 69 3e-024
gb|CF400042.1|CF400042 RTWW1_2_B12.g1_A015 Well-watered lob... 69 3e-024
gb|CF667910.1|CF667910 RTCNT1_33_F09.b1_A029 Root control P... 69 3e-024
gb|CF400908.1|CF400908 RTWW1_8_E05.g1_A015 Well-watered lob... 69 3e-024
gb|CF478167.1|CF478167 RTWW3_19_D10.g1_A022 Well-watered lo... 69 3e-024
gb|CF387222.1|CF387222 RTDR1_11_G09.g1_A015 Loblolly pine r... 69 3e-024
gb|DR080585.1|DR080585 RTFEPL1_23_F03.g1_A029 Roots plus ad... 69 3e-024
gb|DR097144.1|DR097144 STRR1_32_G02.g1_A033 Stem Response R... 69 3e-024
gb|CF476224.1|CF476224 RTWW2_21_G05.g1_A021 Well-watered lo... 69 3e-024
gb|CF387858.1|CF387858 RTDR1_18_G08.g1_A015 Loblolly pine r... 69 3e-024
gb|CF474599.1|CF474599 RTWW2_9_B11.g1_A021 Well-watered lob... 69 3e-024
gb|DR051643.1|DR051643 RTBOR1_31_A06.g1_A029 Roots plus add... 69 3e-024
gb|CF386153.1|CF386153 RTDR1_8_F07.g1_A015 Loblolly pine ro... 69 3e-024
gb|DR100740.1|DR100740 STRR1_67_D09.g1_A033 Stem Response R... 69 3e-024
gb|CF479354.1|CF479354 RTWW3_23_A02.g1_A022 Well-watered lo... 69 3e-024
gb|CF385997.1|CF385997 RTDR1_7_F03.g1_A015 Loblolly pine ro... 69 3e-024
gb|CF396339.1|CF396339 RTDS2_21_E03.g1_A021 Drought-stresse... 69 3e-024
gb|CF670639.1|CF670639 RTCNT1_51_C08.g1_A029 Root control P... 69 3e-024
gb|DR746369.1|DR746369 RTCU1_36_B12.g1_A029 Roots plus adde... 69 3e-024
gb|CF385824.1|CF385824 RTDR1_6_G06.g1_A015 Loblolly pine ro... 69 3e-024
gb|CF671702.1|CF671702 RTCNT1_58_F02.g1_A029 Root control P... 69 3e-024
gb|CX650676.1|CX650676 COLD1_47_G08.b1_A029 Root cold Pinus... 69 3e-024
gb|CO201773.1|CO201773 RTCNT2_8_C02.b1_A029 Root control 2 ... 69 3e-024
gb|CV033129.1|CV033129 RTNACL1_20_C02.g1_A029 Roots plus ad... 69 3e-024
gb|DR081719.1|DR081719 RTFEPL1_31_F02.g1_A029 Roots plus ad... 69 3e-024
gb|CF401358.1|CF401358 RTWW1_12_D11.b1_A015 Well-watered lo... 69 3e-024
gb|DR683522.1|DR683522 EST1073598 Normalized pine embryo li... 50 3e-024
gb|DT631588.1|DT631588 EST1146519 Normalized pine embryo li... 50 4e-024
gb|DR091768.1|DR091768 RTAL1_23_G03.g1_A029 Roots plus adde... 69 4e-024
gb|BX251692.1|BX251692 BX251692 Pinus pinaster differenciat... 111 5e-024
gb|DR119824.1|DR119824 RTMG1_25_F07.g2_A029 Roots minus mag... 69 7e-024
gb|DR088806.1|DR088806 RTAL1_4_E05.g1_A029 Roots plus added... 60 7e-024
gb|CO200290.1|CO200290 GEO2_6_C05.g1_A032 Root gravitropism... 60 9e-024
gb|DT636149.1|DT636149 EST1151080 Normalized pine embryo li... 78 1e-023
gb|CO173479.1|CO173479 NDL1_36_B03.g1_A029 Needles control ... 74 1e-023
gb|DR690547.1|DR690547 EST1080633 Normalized pine embryo li... 78 1e-023
gb|CF397643.1|CF397643 RTDS3_4_E08.g1_A022 Drought-stressed... 76 2e-023
gb|DR177989.1|DR177989 RTMNUT1_8_C12.g1_A029 Roots minus mi... 77 3e-023
gb|DT636954.1|DT636954 EST1151885 Normalized pine embryo li... 63 4e-023
gb|DR691661.1|DR691661 EST1081748 Normalized pine embryo li... 63 4e-023
gb|DR019054.1|DR019054 STRS1_27_B12.g1_A034 Shoot tip pitch... 64 4e-023
gb|DR169045.1|DR169045 RTPHOS1_29_D02.g1_A029 Roots minus p... 65 6e-023
gb|DR023170.1|DR023170 STRS1_55_H11.g1_A034 Shoot tip pitch... 49 7e-023
gb|DN459360.1|DN459360 EST955159 Sequencing ESTs from loblo... 69 8e-023
gb|DN614504.1|DN614504 EST967554 Subtracted pine embryo lib... 73 8e-023
gb|DT629163.1|DT629163 EST1155733 Subtracted pine embryo li... 73 8e-023
gb|DR100122.1|DR100122 STRR1_61_H06.g1_A033 Stem Response R... 98 1e-022
gb|DR684650.1|DR684650 EST1074727 Normalized pine embryo li... 98 2e-022
gb|DR018089.1|DR018089 STRS1_20_A03.g1_A034 Shoot tip pitch... 75 2e-022
gb|DR054002.1|DR054002 RTCA1_14_D08.g1_A029 Roots minus cal... 68 2e-022
gb|DR018972.1|DR018972 STRS1_27_B12.b1_A034 Shoot tip pitch... 62 3e-022
gb|CO413939.1|CO413939 EST844324 Sequencing ESTs from loblo... 68 4e-022
gb|CO365642.1|CO365642 RTK1_18_G06.b1_A029 Roots minus pota... 104 4e-022
gb|CO365725.1|CO365725 RTK1_18_G06.g1_A029 Roots minus pota... 104 4e-022
gb|DR387413.1|DR387413 RTHG1_21_C09.g2_A029 Roots plus adde... 104 4e-022
gb|DT637328.1|DT637328 EST1152259 Normalized pine embryo li... 61 5e-022
gb|DR692382.1|DR692382 EST1082470 Normalized pine embryo li... 61 5e-022
gb|DN631263.1|DN631263 EST982079 Subtracted pine embryo lib... 58 6e-022
gb|DN634126.1|DN634126 EST984942 Subtracted pine embryo lib... 58 6e-022
gb|DN629443.1|DN629443 EST980259 Subtracted pine embryo lib... 58 6e-022
gb|DN630113.1|DN630113 EST980929 Subtracted pine embryo lib... 58 6e-022
gb|DN630653.1|DN630653 EST981469 Subtracted pine embryo lib... 58 6e-022
gb|DN633925.1|DN633925 EST984741 Subtracted pine embryo lib... 58 6e-022
gb|DN632362.1|DN632362 EST983178 Subtracted pine embryo lib... 58 6e-022
gb|DR018147.1|DR018147 STRS1_20_F06.g1_A034 Shoot tip pitch... 73 7e-022
gb|DR160439.1|DR160439 RTFE1_6_B01.b1_A029 Roots minus iron... 58 9e-022
gb|DR182362.1|DR182362 RTMNUT1_44_C02.g1_A029 Roots minus m... 58 9e-022
gb|CO197979.1|CO197979 GEO1_10_A10.g1_A029 Root gravitropis... 58 9e-022
gb|CV036625.1|CV036625 RTNACL1_60_C08.g1_A029 Roots plus ad... 58 9e-022
gb|DN628614.1|DN628614 EST979430 Subtracted pine embryo lib... 58 9e-022
gb|CF479230.1|CF479230 RTWW3_24_H06.g1_A022 Well-watered lo... 58 9e-022
gb|DR745373.1|DR745373 RTCU1_28_H03.g1_A029 Roots plus adde... 58 9e-022
gb|CF473412.1|CF473412 RTWW2_2_E08.g1_A021 Well-watered lob... 58 9e-022
gb|CV032389.1|CV032389 RTNACL1_7_F09.g2_A029 Roots plus add... 58 9e-022
gb|DR744050.1|DR744050 RTCU1_19_H10.g1_A029 Roots plus adde... 58 9e-022
gb|CF479182.1|CF479182 RTWW3_24_H05.g1_A022 Well-watered lo... 58 9e-022
gb|CF396967.1|CF396967 RTDS2_25_F07.g1_A021 Drought-stresse... 50 1e-021
gb|CO176351.1|CO176351 NDL1_61_A09.g1_A029 Needles control ... 102 1e-021
gb|DR078911.1|DR078911 RTFEPL1_7_E01.g1_A029 Roots plus add... 58 4e-021
>gb|DR691625.1|DR691625 EST1081712 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADA80 3' end, mRNA sequence
Length = 856
Score = 116 bits (247), Expect(3) = 2e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 442 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 606
Score = 68.4 bits (143), Expect(3) = 2e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 253 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 432
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 433 KAKVRRVVLTSS 468
Score = 49.6 bits (102), Expect(3) = 2e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 112 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 225
>gb|DT634011.1|DT634011 EST1148942 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG125 3' end, mRNA sequence
Length = 794
Score = 116 bits (247), Expect(3) = 2e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 611 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 775
Score = 68.4 bits (143), Expect(3) = 2e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 422 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 601
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 602 KAKVRRVVLTSS 637
Score = 49.6 bits (102), Expect(3) = 2e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 281 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 394
>gb|CF394951.1|CF394951 RTDS2_8_G09.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_G09_A021 5', mRNA sequence
Length = 749
Score = 116 bits (247), Expect(3) = 2e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 421 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 585
Score = 68.4 bits (143), Expect(3) = 2e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 232 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 411
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 412 KAKVRRVVLTSS 447
Score = 49.6 bits (102), Expect(3) = 2e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 91 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 204
>gb|CF397252.1|CF397252 RTDS3_2_E08.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_E08_A022 5', mRNA sequence
Length = 741
Score = 116 bits (247), Expect(3) = 2e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 402 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 566
Score = 68.4 bits (143), Expect(3) = 2e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 213 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 392
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 393 KAKVRRVVLTSS 428
Score = 49.6 bits (102), Expect(3) = 2e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 72 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 185
>gb|CO201268.1|CO201268 RTCNT2_4_E02.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_4_E02_A029 5', mRNA sequence
Length = 705
Score = 116 bits (247), Expect(3) = 2e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 401 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 565
Score = 68.4 bits (143), Expect(3) = 2e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 212 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 391
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 392 KAKVRRVVLTSS 427
Score = 49.6 bits (102), Expect(3) = 2e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 71 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 184
>gb|CF395125.1|CF395125 RTDS2_9_F12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_9_F12_A021 5', mRNA sequence
Length = 702
Score = 116 bits (247), Expect(3) = 2e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 424 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 588
Score = 68.4 bits (143), Expect(3) = 2e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 235 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 414
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 415 KAKVRRVVLTSS 450
Score = 49.6 bits (102), Expect(3) = 2e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 94 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 207
>gb|CF398940.1|CF398940 RTDS3_11_A07.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_11_A07_A022 5', mRNA sequence
Length = 640
Score = 116 bits (247), Expect(3) = 2e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 413 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 577
Score = 68.4 bits (143), Expect(3) = 2e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 224 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 403
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 404 KAKVRRVVLTSS 439
Score = 49.6 bits (102), Expect(3) = 2e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 83 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 196
>gb|CV034689.1|CV034689 RTNACL1_10_H12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_H12_A029 5', mRNA sequence
Length = 701
Score = 116 bits (247), Expect(3) = 5e-049
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLAEKAAW
Sbjct: 378 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAW 542
Score = 67.0 bits (140), Expect(3) = 5e-049
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
+L F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 189 KLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 368
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 369 KAKVRRVVLTSS 404
Score = 49.6 bits (102), Expect(3) = 5e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 48 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 161
>gb|DR160987.1|DR160987 RTFE1_9_E02.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_9_E02_A029 3', mRNA sequence
Length = 760
Score = 112 bits (240), Expect(3) = 7e-049
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / -3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 281 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 117
Score = 68.4 bits (143), Expect(3) = 7e-049
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3 / -3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A +
Sbjct: 470 RLELFQIDLLDYGSIETAINGSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQ 291
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 290 KAKVKRLVLTSS 255
Score = 51.0 bits (105), Expect(3) = 7e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+VR V D + ET H
Sbjct: 611 VTGASGFIGSWVVRLLLERGYSVRGTVQDLGNEKETRH 498
>gb|DR743419.1|DR743419 RTCU1_15_F04.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_15_F04_A029 5', mRNA sequence
Length = 751
Score = 112 bits (240), Expect(3) = 7e-049
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 424 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 588
Score = 68.4 bits (143), Expect(3) = 7e-049
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A +
Sbjct: 235 RLELFQIDLLDYGSIETAINGSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQ 414
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 415 KAKVKRLVLTSS 450
Score = 51.0 bits (105), Expect(3) = 7e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+VR V D + ET H
Sbjct: 94 VTGASGFIGSWVVRLLLERGYSVRGTVQDLGNEKETRH 207
>gb|CF396401.1|CF396401 RTDS2_21_A05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_21_A05_A021 5', mRNA sequence
Length = 681
Score = 112 bits (240), Expect(3) = 7e-049
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 425 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 589
Score = 68.4 bits (143), Expect(3) = 7e-049
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A +
Sbjct: 236 RLELFQIDLLDYGSIETAINGSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQ 415
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 416 KAKVKRLVLTSS 451
Score = 51.0 bits (105), Expect(3) = 7e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+VR V D + ET H
Sbjct: 95 VTGASGFIGSWVVRLLLERGYSVRGTVQDLGNEKETRH 208
>gb|BX250121.1|BX250121 BX250121 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP032F11 similar to DIHYDROFLAVONOL 4
REDUCTASE, mRNA sequence
Length = 667
Score = 112 bits (240), Expect(3) = 7e-049
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 434 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 598
Score = 68.4 bits (143), Expect(3) = 7e-049
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A +
Sbjct: 245 RLELFQIDLLDYGSIETAINGSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQ 424
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 425 KAKVKRLVLTSS 460
Score = 51.0 bits (105), Expect(3) = 7e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+VR V D + ET H
Sbjct: 104 VTGASGFIGSWVVRLLLERGYSVRGTVQDLGNEKETRH 217
>gb|CF395959.1|CF395959 RTDS2_19_G12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_G12_A021 5', mRNA sequence
Length = 652
Score = 113 bits (242), Expect(3) = 7e-049
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +KTLA KAAW
Sbjct: 395 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLARKAAW 559
Score = 68.9 bits (144), Expect(3) = 7e-049
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 206 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAN 385
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 386 KAKVRRVVLTSS 421
Score = 49.6 bits (102), Expect(3) = 7e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 65 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 178
>gb|DR092019.1|DR092019 RTAL1_25_C12.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_25_C12_A029 5', mRNA sequence
Length = 637
Score = 112 bits (240), Expect(3) = 7e-049
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 369 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 533
Score = 68.4 bits (143), Expect(3) = 7e-049
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A +
Sbjct: 180 RLELFQIDLLDYGSIETAINGSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQ 359
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 360 KAKVKRLVLTSS 395
Score = 51.0 bits (105), Expect(3) = 7e-049
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+VR V D + ET H
Sbjct: 39 VTGASGFIGSWVVRLLLERGYSVRGTVQDLGNEKETRH 152
>gb|DR687130.1|DR687130 EST1077208 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABN61 3' end, mRNA sequence
Length = 773
Score = 96.8 bits (205), Expect(3) = 1e-043
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASK 482
VRRVV+TSSISA++PNP WPAG+ +DE CWTD+DYC +NG+WY +K
Sbjct: 603 VRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAK 743
Score = 68.4 bits (143), Expect(3) = 1e-043
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 414 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 593
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 594 KAKVRRVVLTSS 629
Score = 49.6 bits (102), Expect(3) = 1e-043
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 273 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 386
>gb|BX254376.1|BX254376 BX254376 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP097G09 similar to DIHYDROFLAVONOL 4
REDUCTASE, mRNA sequence
Length = 512
Score = 112 bits (240), Expect(3) = 1e-041
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 337 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 501
Score = 68.4 bits (143), Expect(3) = 1e-041
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A +
Sbjct: 148 RLELFQIDLLDYGSIETAINGSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQ 327
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 328 KAKVKRLVLTSS 363
Score = 26.3 bits (51), Expect(3) = 1e-041
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVR 44
VTGASG IGS +VR
Sbjct: 8 VTGASGLIGSWVVR 49
>gb|DR694406.1|DR694406 EST1084498 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC07 3' end, mRNA sequence
Length = 811
Score = 112 bits (240), Expect(2) = 2e-038
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 148 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 312
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A + A R V+ +S
Sbjct: 19 GSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQKAKVKRLVLTSS 174
>gb|BX680287.1|BX680287 BX680287 RS Pinus pinaster cDNA clone RS41E08, mRNA sequence
Length = 613
Score = 112 bits (240), Expect(2) = 2e-038
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAEKAAW
Sbjct: 176 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAW 340
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A + A R V+ +S
Sbjct: 47 GSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQKAKVKRLVLTSS 202
>gb|BQ699059.1|BQ699059 NXRV119_A02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV119_A02 5' similar to Arabidopsis thaliana
sequence At5g58490 cinnamoyl-CoA reductase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 502
Score = 108 bits (230), Expect(2) = 8e-038
Identities = 37/55 (67%), Positives = 47/55 (85%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSSISA++P+P WPA DE CWTD+DYC++NG+WYPASKTLAE AW
Sbjct: 210 VKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEXXAW 374
Score = 68.4 bits (143), Expect(2) = 8e-038
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ G GVFHLASPC V+ VK+PQ QL+ PAV+GT++V++A +
Sbjct: 21 RLELFQIDLLDYGSIETAINGSVGVFHLASPCIVEEVKNPQAQLLDPAVKGTMHVLQAAQ 200
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 201 KAKVKRLVLTSS 236
>gb|AW056441.1|AW056441 ST51H10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST51H10, mRNA sequence
Length = 462
Score = 68.4 bits (143), Expect(3) = 8e-034
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 156 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 335
Query: 330 DAGGVRRVVVTS 365
A R V+ +S
Sbjct: 336 KAKVRRVVLTSS 371
Score = 62.5 bits (130), Expect(3) = 8e-034
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKN 458
VRRVV+TSSISA++PNP W A E CWT YC +N
Sbjct: 345 VRRVVLTSSISAIIPNPXWXAXXPXXENCWTXXXYCREN 461
Score = 49.6 bits (102), Expect(3) = 8e-034
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 15 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 128
>gb|DR683334.1|DR683334 EST1073410 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAF96 3' end, mRNA sequence
Length = 732
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSIS++VPNP WP V+DE WTDI+YCE++ +WYP SKTLAEKAAW
Sbjct: 429 VKRVVLTSSISSLVPNPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAW 593
Score = 49.6 bits (102), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTG SGFIGS LVR LL RGY V A + + D E DH
Sbjct: 99 VTGGSGFIGSWLVRQLLERGYTVHATLQNLSDPKERDH 212
>gb|DT631435.1|DT631435 EST1146366 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF874 3' end, mRNA sequence
Length = 781
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSIS++VPNP WP V+DE WTDI+YCE++ +WYP SKTLAEKAAW
Sbjct: 437 VKRVVLTSSISSLVPNPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAW 601
Score = 49.6 bits (102), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTG SGFIGS LVR LL RGY V A + + D E DH
Sbjct: 107 VTGGSGFIGSWLVRQLLERGYTVHATLQNLSDPKERDH 220
>gb|CV034910.1|CV034910 RTNACL1_12_A02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_12_A02_A029 5', mRNA sequence
Length = 805
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSIS++VPNP WP V+DE WTDI+YCE++ +WYP SKTLAEKAAW
Sbjct: 390 VKRVVLTSSISSLVPNPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAW 554
Score = 49.6 bits (102), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTG SGFIGS LVR LL RGY V A + + D E DH
Sbjct: 60 VTGGSGFIGSWLVRQLLERGYTVHATLQNLSDPKERDH 173
>gb|DR111138.1|DR111138 RTS1_15_D02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_15_D02_A029 5', mRNA sequence
Length = 825
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +3 / +3
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSIS++VPNP WP V+DE WTDI+YCE++ +WYP SKTLAEKAAW
Sbjct: 363 VKRVVLTSSISSLVPNPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAW 527
Score = 49.6 bits (102), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTG SGFIGS LVR LL RGY V A + + D E DH
Sbjct: 33 VTGGSGFIGSWLVRQLLERGYTVHATLQNLSDPKERDH 146
>gb|DT631025.1|DT631025 EST1145956 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF410 3' end, mRNA sequence
Length = 832
Score = 107 bits (229), Expect(2) = 1e-031
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+TSSIS++VPNP WP V+DE WTDI+YCE++ +WYP SKTLAEKAAW
Sbjct: 437 VKRVVLTSSISSLVPNPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAW 601
Score = 49.6 bits (102), Expect(2) = 1e-031
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTG SGFIGS LVR LL RGY V A + + D E DH
Sbjct: 107 VTGGSGFIGSWLVRQLLERGYTVHATLQNLSDPKERDH 220
>gb|DR057944.1|DR057944 RTNIT1_8_F03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_F03_A029 5', mRNA sequence
Length = 873
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 340 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 519
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 520 AEYCKQTKAWYQLSKTLAEETAW 588
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 94 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 207
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 295 GCEGVFHTASP 327
>gb|CX648300.1|CX648300 COLD1_27_F09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_F09_A029 5', mRNA sequence
Length = 846
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 347 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 526
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 527 AEYCKQTKAWYQLSKTLAEETAW 595
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 101 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 214
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 302 GCEGVFHTASP 334
>gb|CO365287.1|CO365287 RTK1_24_F09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_24_F09_A029 5', mRNA sequence
Length = 802
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 330 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 509
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 510 AEYCKQTKAWYQLSKTLAEETAW 578
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 84 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 197
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 285 GCEGVFHTASP 317
>gb|DT631006.1|DT631006 EST1145937 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF381 3' end, mRNA sequence
Length = 798
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 354 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 533
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 534 AEYCKQTKAWYQLSKTLAEETAW 602
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 108 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 221
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 309 GCEGVFHTASP 341
>gb|DR386518.1|DR386518 RTHG1_15_F01.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_15_F01_A029 5', mRNA sequence
Length = 795
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 296 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 475
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 476 AEYCKQTKAWYQLSKTLAEETAW 544
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 50 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 163
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 251 GCEGVFHTASP 283
>gb|DR386833.1|DR386833 RTHG1_17_E10.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_E10_A029 5', mRNA sequence
Length = 793
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 372 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 551
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 552 AEYCKQTKAWYQLSKTLAEETAW 620
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 126 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 239
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 327 GCEGVFHTASP 359
>gb|CV033145.1|CV033145 RTNACL1_20_D09.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_20_D09_A029 5', mRNA sequence
Length = 762
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 352 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 531
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 532 AEYCKQTKAWYQLSKTLAEETAW 600
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 106 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 219
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 307 GCEGVFHTASP 339
>gb|CO158570.1|CO158570 FLD1_7_F06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_7_F06_A029 5', mRNA sequence
Length = 751
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 332 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 511
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 512 AEYCKQTKAWYQLSKTLAEETAW 580
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 86 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 199
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 287 GCEGVFHTASP 319
>gb|CF388989.1|CF388989 RTDR2_16_H07.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_16_H07_A021 5', mRNA
sequence
Length = 736
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 331 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 510
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 511 AEYCKQTKAWYQLSKTLAEETAW 579
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 85 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 198
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 286 GCEGVFHTASP 318
>gb|CF671535.1|CF671535 RTCNT1_57_F03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_57_F03_A029 5', mRNA sequence
Length = 715
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 328 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 507
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 508 AEYCKQTKAWYQLSKTLAEETAW 576
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 82 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 195
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 283 GCEGVFHTASP 315
>gb|DR682183.1|DR682183 EST1072258 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA810 3' end, mRNA sequence
Length = 696
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 302 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 481
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 482 AEYCKQTKAWYQLSKTLAEETAW 550
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 56 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 169
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 257 GCEGVFHTASP 289
>gb|CF388934.1|CF388934 RTDR2_16_A10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_16_A10_A021 5', mRNA
sequence
Length = 687
Score = 98.2 bits (208), Expect(3) = 5e-031
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 277 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 456
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 457 AEYCKQTKAWYQLSKTLAEETAW 525
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 31 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 144
Score = 27.2 bits (53), Expect(3) = 5e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 232 GCEGVFHTASP 264
>gb|DR101229.1|DR101229 STRR1_71_A02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_71_A02_A033 5', mRNA sequence
Length = 581
Score = 98.2 bits (208), Expect(3) = 2e-030
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 245 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 424
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 425 AEYCKQTKAWYQLSKTLAEETAW 493
Score = 44.6 bits (91), Expect(3) = 2e-030
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +3 / +2
Query: 6 TGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
TGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 2 TGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 112
Score = 27.2 bits (53), Expect(3) = 2e-030
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 200 GCEGVFHTASP 232
>gb|DT634174.1|DT634174 EST1149105 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG311 3' end, mRNA sequence
Length = 776
Score = 95.0 bits (201), Expect(3) = 4e-030
Identities = 39/83 (46%), Positives = 57/83 (68%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDP +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 380 IKDPLAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 559
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 560 AEYCKQTKAWYQLSKTLAEETAW 628
Score = 46.4 bits (95), Expect(3) = 4e-030
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 134 VTGASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 247
Score = 27.2 bits (53), Expect(3) = 4e-030
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 335 GCEGVFHTASP 367
>gb|DR054652.1|DR054652 RTCA1_18_E03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_E03_A029 5', mRNA sequence
Length = 776
Score = 72.5 bits (152), Expect(3) = 4e-030
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RV++TSS+ AV+ +P P + VDE CW+D +YC K WY +KT++E+ AW
Sbjct: 367 VKRVIMTSSVGAVLMDPQRPRDKFVDESCWSDPEYCRKTENWYYMAKTVSEQDAW 531
Score = 51.0 bits (105), Expect(3) = 4e-030
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRA 323
RL + GCSGVFH ASP +P+ +++ PA++GTLNV++A
Sbjct: 178 RLKLLKADLLDYDSLLEAINGCSGVFHTASPVPSQRASNPEVEVINPALKGTLNVLKA 351
Score = 45.1 bits (92), Expect(3) = 4e-030
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA GFI S LV+ LL RGYNVR +P D
Sbjct: 40 VTGAGGFIASWLVKLLLERGYNVRGTAREPGD 135
>gb|DR112145.1|DR112145 RTS1_26_E05.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_26_E05_A029 3', mRNA sequence
Length = 454
Score = 70.3 bits (147), Expect(3) = 1e-029
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +3 / -1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC+GVFHLA P T+D V DPQ QL+ P ++GT+NV+ A
Sbjct: 268 RLKLFKMDLMDYSSIQDAIDGCAGVFHLAMPNTIDAVADPQKQLLDPGIKGTINVLEAAH 89
Query: 330 DAGGVRRVVVTS 365
A +R V+ +S
Sbjct: 88 KAKVMRVVLTSS 53
Score = 49.6 bits (102), Expect(3) = 1e-029
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / -1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY+V A V D + ET H
Sbjct: 409 VTGASGFIGSWVVRLLLERGYSVHATVQDLGNWKETKH 296
Score = 46.4 bits (95), Expect(3) = 1e-029
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3 / -1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVD 419
V RVV+TSSISA++PNP WPAG +D
Sbjct: 79 VMRVVLTSSISAIIPNPKWPAG*PLD 2
>gb|BX250949.1|BX250949 BX250949 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP043C07 similar to DIHYDROFLAVONOL 4
REDUCTASE, mRNA sequence
Length = 671
Score = 103 bits (219), Expect(2) = 1e-029
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+R+V+TSS +A VP+P WPA DE CWTD+DYC++NG+WY ASKTLAEK AW
Sbjct: 344 VKRLVLTSSTAATVPSPNWPADVPKDENCWTDLDYCKENGIWYSASKTLAEKTAW 508
Score = 47.3 bits (97), Expect(2) = 1e-029
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS +VR LL RGY V V D + ET H
Sbjct: 14 VTGASGFIGSWVVRLLLERGYFVHGTVQDLGNEKETKH 127
>gb|DR048451.1|DR048451 RTBOR1_9_B07.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_9_B07_A029 3', mRNA sequence
Length = 895
Score = 61.1 bits (127), Expect(4) = 1e-029
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3 / -1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
VKDPQ +++ PAV+GTLNV+ A A V+RVVVTSS++AV N + + V + W
Sbjct: 601 VKDPQAEMLDPAVKGTLNVLNACAKASSVKRVVVTSSVAAVTYNFRPRSPDTVVDETW 428
Score = 49.6 bits (102), Expect(4) = 1e-029
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3 / -1
Query: 411 VVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VVDE ++D++YC++ WY SKTLAE+ AW
Sbjct: 445 VVDETWFSDVEYCKQAKAWYQLSKTLAEETAW 350
Score = 46.4 bits (95), Expect(4) = 1e-029
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3 / -1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA + D + +T+H
Sbjct: 847 VTGASGFIASWLVKLLLDRGYVVRATLRDIGNPQKTEH 734
Score = 27.2 bits (53), Expect(4) = 1e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 646 GCEGVFHTASP 614
>gb|DT631243.1|DT631243 EST1146174 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF657 3' end, mRNA sequence
Length = 857
Score = 61.1 bits (127), Expect(4) = 1e-029
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCW 431
VKDPQ +++ PAV+GTLNV+ A A V+RVVVTSS++AV N + + V + W
Sbjct: 347 VKDPQAEMLDPAVKGTLNVLNACAKASSVKRVVVTSSVAAVTYNFRPRSPDTVVDETW 520
Score = 49.6 bits (102), Expect(4) = 1e-029
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 411 VVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
VVDE ++D++YC++ WY SKTLAE+ AW
Sbjct: 503 VVDETWFSDVEYCKQAKAWYQLSKTLAEETAW 598
Score = 46.4 bits (95), Expect(4) = 1e-029
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFI S LV+ LL RGY VRA + D + +T+H
Sbjct: 101 VTGASGFIASWLVKLLLDRGYVVRATLRDIGNPQKTEH 214
Score = 27.2 bits (53), Expect(4) = 1e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 302 GCEGVFHTASP 334
>gb|CV031653.1|CV031653 RTNACL1_2_H03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_H03_A029 5', mRNA sequence
Length = 768
Score = 75.8 bits (159), Expect(4) = 1e-029
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +3 / +2
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDI 440
KDP+N ++ PA+ GTLNV+++ A V+RVVVTSS + V N + +DE CWTD+
Sbjct: 332 KDPENDVIKPAINGTLNVLKSCTKATTVKRVVVTSSAATVSVNESAEENQYIDESCWTDV 511
Query: 441 DYCE 452
D+ +
Sbjct: 512 DFLQ 523
Score = 49.2 bits (101), Expect(4) = 1e-029
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA+GF+ S LV+ L+ +GY V A V DPD+ A+ H
Sbjct: 83 VTGAAGFVASWLVKLLIEKGYTVHATVRDPDNEAKVRH 196
Score = 33.6 bits (67), Expect(4) = 1e-029
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDP 257
RL FR GC GVFHLA+P P
Sbjct: 224 RLKLFRAELSEDGSFDAAVAGCHGVFHLATPIDFAP 331
Score = 25.8 bits (50), Expect(4) = 1e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 468 YPASKTLAEKAA 503
YP SKTLAE+AA
Sbjct: 548 YPVSKTLAEQAA 583
>gb|DR110492.1|DR110492 RTS1_11_E07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_11_E07_A029 3', mRNA sequence
Length = 731
Score = 75.8 bits (159), Expect(4) = 3e-029
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +3 / -3
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDI 440
KDP+N ++ PA+ GTLNV+++ A V+RVVVTSS + V N + +DE CWTD+
Sbjct: 369 KDPENDVIKPAINGTLNVLKSCTKATTVKRVVVTSSAATVSVNESAEENQYIDESCWTDV 190
Query: 441 DYCE 452
D+ +
Sbjct: 189 DFLQ 178
Score = 47.8 bits (98), Expect(4) = 3e-029
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3 / -3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
+TGA+GF+ S LV+ L+ +GY V A V DPD+ A+ H
Sbjct: 618 LTGAAGFVASWLVKLLIEKGYTVHATVRDPDNEAKVRH 505
Score = 33.6 bits (67), Expect(4) = 3e-029
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3 / -3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDP 257
RL FR GC GVFHLA+P P
Sbjct: 477 RLKLFRAELSEDGSFNAAVAGCHGVFHLATPIDFAP 370
Score = 25.8 bits (50), Expect(4) = 3e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 468 YPASKTLAEKAA 503
YP SKTLAE+AA
Sbjct: 153 YPVSKTLAEQAA 118
>gb|DR012735.1|DR012735 HEAT1_14_E06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_E06_A029 5', mRNA sequence
Length = 590
Score = 98.2 bits (208), Expect(3) = 5e-029
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
+KDPQ +++ PAV+GT NV+ A A V+RV+VTSS++AV+ N + VVDE ++D
Sbjct: 239 IKDPQAEMLDPAVKGTTNVLNACAKASSVKRVIVTSSVAAVIFNSRPRSPGVVDETWFSD 418
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+YC++ WY SKTLAE+ AW
Sbjct: 419 AEYCKQTKAWYQLSKTLAEETAW 487
Score = 39.6 bits (80), Expect(3) = 5e-029
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3 / +2
Query: 12 ASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
ASGFI S LV+ LL RGY VRA V D + +T H
Sbjct: 2 ASGFIASWLVKLLLDRGYVVRATVRDLGNPEKTKH 106
Score = 27.2 bits (53), Expect(3) = 5e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 210 GCSGVFHLASP 242
GC GVFH ASP
Sbjct: 194 GCEGVFHTASP 226
>gb|CF671510.1|CF671510 RTCNT1_57_C10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_57_C10_A029 5', mRNA sequence
Length = 814
Score = 73.5 bits (154), Expect(4) = 6e-029
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +3 / +2
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDI 440
KDP+N ++ PAVEGTLNV+RA A V+R+VVTSS S ++ N + VDE WTD+
Sbjct: 410 KDPENDVIKPAVEGTLNVLRACTKANTVKRMVVTSSGSTLLVNELKEQSQFVDETHWTDV 589
Query: 441 DY 446
D+
Sbjct: 590 DF 595
Score = 51.5 bits (106), Expect(4) = 6e-029
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA+GFI S LV+ LL +GY V A V DP+++A+ H
Sbjct: 161 VTGATGFIASWLVKRLLEKGYTVHATVRDPENKAKVQH 274
Score = 32.7 bits (65), Expect(4) = 6e-029
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDP 257
+L FR GC GVFH+ASP P
Sbjct: 302 KLKLFRADLLEEGSFDAAIHGCDGVFHVASPIDFAP 409
Score = 24.4 bits (47), Expect(4) = 6e-029
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 468 YPASKTLAEKAA 503
YP +KTLAE+AA
Sbjct: 626 YPVAKTLAEQAA 661
>gb|CF671834.1|CF671834 RTCNT1_59_C10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_59_C10_A029 5', mRNA sequence
Length = 765
Score = 73.5 bits (154), Expect(4) = 6e-029
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +3 / +1
Query: 261 KDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDI 440
KDP+N ++ PAVEGTLNV+RA A V+R+VVTSS S ++ N + VDE WTD+
Sbjct: 370 KDPENDVIKPAVEGTLNVLRACTKANTVKRMVVTSSGSTLLVNELKEQSQFVDETHWTDV 549
Query: 441 DY 446
D+
Sbjct: 550 DF 555
Score = 51.5 bits (106), Expect(4) = 6e-029
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA+GFI S LV+ LL +GY V A V DP+++A+ H
Sbjct: 121 VTGATGFIASWLVKRLLEKGYTVHATVRDPENKAKVQH 234
Score = 32.7 bits (65), Expect(4) = 6e-029
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDP 257
+L FR GC GVFH+ASP P
Sbjct: 262 KLKLFRADLLEEGSFDAAIHGCDGVFHVASPIDFAP 369
Score = 24.4 bits (47), Expect(4) = 6e-029
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 468 YPASKTLAEKAA 503
YP +KTLAE+AA
Sbjct: 586 YPVAKTLAEQAA 621
>gb|DR694679.1|DR694679 EST1084771 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEF50 3' end, mRNA sequence
Length = 816
Score = 72.5 bits (152), Expect(3) = 7e-029
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RV++TSS+ AV+ +P P + VDE CW+D +YC K WY +KT++E+ AW
Sbjct: 541 VKRVIMTSSVGAVLMDPQRPRDKFVDESCWSDPEYCRKTENWYYMAKTVSEQDAW 705
Score = 51.0 bits (105), Expect(3) = 7e-029
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRA 323
RL + GCSGVFH ASP +P+ +++ PA++GTLNV++A
Sbjct: 352 RLKLLKADLLDYDSLLEAINGCSGVFHTASPVPSQRASNPEVEVINPALKGTLNVLKA 525
Score = 40.9 bits (83), Expect(3) = 7e-029
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +3 / +1
Query: 9 GASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
GA GFI S LV+ LL RGYNVR +P D
Sbjct: 220 GAGGFIASWLVKLLLERGYNVRGTAREPGD 309
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 128,958,116
Number of Sequences: 355925
Number of extensions: 1111480
Number of successful extensions: 26442
Number of sequences better than 1.0e-020: 283
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 6350007690
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)