TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950290.2.1
(1442 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR167446.1|DR167446 RTPHOS1_18_G10.g1_A029 Roots minus p... 200 1e-079
gb|CF476788.1|CF476788 RTWW3_3_B03.g1_A022 Well-watered lob... 187 2e-077
gb|DR182367.1|DR182367 RTMNUT1_44_C07.g1_A029 Roots minus m... 215 3e-076
gb|CF471275.1|CF471275 RTDS1_2_H04.g1_A015 Drought-stressed... 186 3e-075
gb|DR071484.1|DR071484 RTDK1_20_E02.b1_A029 Roots, dark Pin... 193 9e-068
gb|DR055256.1|DR055256 RTCA1_22_C01.g2_A029 Roots minus cal... 187 8e-064
gb|CF668420.1|CF668420 RTCNT1_36_H09.b1_A029 Root control P... 187 8e-064
gb|BX253771.1|BX253771 BX253771 Pinus pinaster differenciat... 186 2e-063
gb|DR024424.1|DR024424 STRS1_64_H01.g1_A034 Shoot tip pitch... 186 1e-062
gb|CF479056.1|CF479056 RTWW3_21_E08.g1_A022 Well-watered lo... 198 1e-058
gb|DR097253.1|DR097253 STRR1_33_B12.g3_A033 Stem Response R... 75 2e-056
gb|CO366259.1|CO366259 RTK1_26_G01.g1_A029 Roots minus pota... 75 2e-056
gb|BX253806.1|BX253806 BX253806 Pinus pinaster differenciat... 142 2e-054
gb|CV031359.1|CV031359 RTNACL1_1_C09.b1_A029 Roots plus add... 141 6e-054
gb|CV034364.1|CV034364 RTNACL1_40_A11.g1_A029 Roots plus ad... 138 2e-053
gb|CO159142.1|CO159142 FLD1_11_E04.g1_A029 Root flooded Pin... 72 2e-053
gb|CF402352.1|CF402352 RTWW1_19_B02.g1_A015 Well-watered lo... 75 3e-053
gb|CF402449.1|CF402449 RTWW1_17_E05.g1_A015 Well-watered lo... 72 5e-053
gb|DR022115.1|DR022115 STRS1_49_A06.b1_A034 Shoot tip pitch... 92 9e-052
gb|CF668505.1|CF668505 RTCNT1_36_H09.g1_A029 Root control P... 199 5e-051
gb|CF386507.1|CF386507 RTDR1_14_D12.g1_A015 Loblolly pine r... 199 3e-050
gb|DR686416.1|DR686416 EST1076494 Normalized pine embryo li... 199 3e-050
gb|DR742719.1|DR742719 RTCU1_6_C03.g2_A029 Roots plus added... 199 3e-050
gb|DR161526.1|DR161526 RTFE1_12_G11.b1_A029 Roots minus iro... 141 4e-050
gb|CV146614.1|CV146614 EST857823 Sequencing ESTs from loblo... 67 7e-050
gb|CX713730.1|CX713730 RTPQ1_12_B02.g1_A032 Roots treated w... 198 1e-049
gb|DR165613.1|DR165613 RTPHOS1_6_F04.b1_A029 Roots minus ph... 197 1e-049
gb|DT633406.1|DT633406 EST1148337 Normalized pine embryo li... 197 1e-049
gb|DR015493.1|DR015493 STRS1_3_G09.g1_A034 Shoot tip pitch ... 180 3e-049
gb|CV031437.1|CV031437 RTNACL1_1_C09.g1_A029 Roots plus add... 196 4e-049
gb|DR069308.1|DR069308 RTDK1_6_H02.b1_A029 Roots, dark Pinu... 196 4e-049
gb|DR069432.1|DR069432 RTDK1_7_F04.b1_A029 Roots, dark Pinu... 196 4e-049
gb|DR687571.1|DR687571 EST1077653 Normalized pine embryo li... 196 4e-049
gb|DR688335.1|DR688335 EST1078419 Normalized pine embryo li... 193 3e-048
gb|CN784949.1|CN784949 EST783640 Sequencing ESTs from loblo... 142 5e-048
gb|CV145041.1|CV145041 EST856250 Sequencing ESTs from loblo... 67 1e-047
gb|CV144853.1|CV144853 EST856062 Sequencing ESTs from loblo... 67 1e-047
gb|DT624591.1|DT624591 EST1158926 Sequencing ESTs from lobl... 67 1e-047
gb|CR393509.1|CR393509 CR393509 RN Pinus pinaster cDNA clon... 186 3e-046
gb|BF517836.1|BF517836 NXSI_027_G07_F NXSI (Nsf Xylem Side ... 175 3e-045
gb|BG318319.1|BG318319 NXPV_012_C02_F NXPV (Nsf Xylem Plani... 168 3e-045
gb|DT624337.1|DT624337 EST1158612 Sequencing ESTs from lobl... 72 3e-045
gb|CV138999.1|CV138999 EST850208 Sequencing ESTs from loblo... 72 3e-045
gb|DT627344.1|DT627344 EST1160420 Sequencing ESTs from lobl... 142 3e-045
gb|DR686925.1|DR686925 EST1077003 Normalized pine embryo li... 117 2e-044
gb|CF400592.1|CF400592 RTWW1_6_A02.g1_A015 Well-watered lob... 73 6e-044
gb|CF667048.1|CF667048 RTCNT1_27_H03.g1_A029 Root control P... 75 1e-043
gb|CF476367.1|CF476367 RTWW2_22_D03.g1_A021 Well-watered lo... 73 2e-042
gb|CX647752.1|CX647752 COLD1_19_G12.g1_A029 Root cold Pinus... 108 3e-042
gb|CF402802.1|CF402802 RTWW1_22_A03.g1_A015 Well-watered lo... 75 4e-042
gb|CO176703.1|CO176703 NDL1_63_E02.g1_A029 Needles control ... 73 5e-042
gb|DR099784.1|DR099784 STRR1_58_B11.g1_A033 Stem Response R... 160 7e-042
gb|DT624647.1|DT624647 EST1158982 Sequencing ESTs from lobl... 67 2e-041
gb|CF668650.1|CF668650 RTCNT1_37_G05.g1_A029 Root control P... 73 1e-040
gb|DR097177.1|DR097177 STRR1_33_B12.b1_A033 Stem Response R... 75 4e-039
gb|DR117827.1|DR117827 RTMG1_9_A11.g1_A029 Roots minus magn... 162 4e-039
gb|DR182292.1|DR182292 RTMNUT1_44_C07.b1_A029 Roots minus m... 91 9e-039
gb|CX646972.1|CX646972 COLD1_12_D10.g1_A029 Root cold Pinus... 72 2e-038
gb|DT634728.1|DT634728 EST1149659 Normalized pine embryo li... 115 9e-038
gb|CF402786.1|CF402786 RTWW1_22_H07.g1_A015 Well-watered lo... 73 4e-037
gb|CO174924.1|CO174924 NDL1_47_D08.b1_A029 Needles control ... 73 4e-037
gb|CF400319.1|CF400319 RTWW1_4_B02.g1_A015 Well-watered lob... 73 4e-036
gb|CX646889.1|CX646889 COLD1_12_D10.b1_A029 Root cold Pinus... 72 5e-036
gb|CF665805.1|CF665805 RTCNT1_18_C09.g1_A029 Root control P... 72 9e-036
gb|DR015405.1|DR015405 STRS1_3_G09.b1_A034 Shoot tip pitch ... 86 9e-036
gb|DR100752.1|DR100752 STRR1_67_F02.g1_A033 Stem Response R... 150 2e-035
gb|DR161613.1|DR161613 RTFE1_12_G11.g1_A029 Roots minus iro... 148 8e-035
gb|CO370492.1|CO370492 RTK1_68_F01.b1_A029 Roots minus pota... 61 2e-034
gb|BG039647.1|BG039647 NXSI_102_E03_F NXSI (Nsf Xylem Side ... 91 2e-032
gb|CO367004.1|CO367004 RTK1_31_C05.g1_A029 Roots minus pota... 60 1e-031
gb|CO366932.1|CO366932 RTK1_31_C05.b1_A029 Roots minus pota... 75 1e-031
gb|DR071305.1|DR071305 RTDK1_19_B07.b1_A029 Roots, dark Pin... 75 1e-031
gb|CF478970.1|CF478970 RTWW3_21_E08.b1_A022 Well-watered lo... 92 1e-030
gb|CF477857.1|CF477857 RTWW3_13_G07.g1_A022 Well-watered lo... 133 2e-030
gb|CO369182.1|CO369182 RTK1_45_B02.g1_A029 Roots minus pota... 73 2e-030
gb|CF476250.1|CF476250 RTWW2_22_D03.b1_A021 Well-watered lo... 73 3e-030
gb|DR091743.1|DR091743 RTAL1_23_D08.g1_A029 Roots plus adde... 131 1e-029
gb|CO370481.1|CO370481 RTK1_68_E01.b1_A029 Roots minus pota... 61 4e-028
gb|BX679786.1|BX679786 BX679786 RS Pinus pinaster cDNA clon... 60 2e-027
gb|CR393781.1|CR393781 CR393781 RN Pinus pinaster cDNA clon... 121 1e-026
gb|DR018433.1|DR018433 STRS1_23_A09.b1_A034 Shoot tip pitch... 66 5e-026
gb|BG275889.1|BG275889 NXSI_149_B05_F NXSI (Nsf Xylem Side ... 69 2e-025
gb|CF401209.1|CF401209 RTWW1_10_A01.g1_A015 Well-watered lo... 73 3e-025
gb|CF476742.1|CF476742 RTWW3_3_B03.b1_A022 Well-watered lob... 85 7e-024
gb|CF479669.1|CF479669 RTWW3_11_B12.g1_A022 Well-watered lo... 73 2e-023
gb|CF401553.1|CF401553 RTWW1_13_E07.g1_A015 Well-watered lo... 69 2e-023
gb|DR080777.1|DR080777 RTFEPL1_25_D08.b1_A029 Roots plus ad... 69 6e-023
gb|CO199210.1|CO199210 GEO1_19_C11.g1_A029 Root gravitropis... 60 4e-022
gb|CF385847.1|CF385847 RTDR1_6_E04.g1_A015 Loblolly pine ro... 60 9e-022
gb|CF666969.1|CF666969 RTCNT1_27_H03.b1_A029 Root control P... 73 1e-021
gb|BE458047.1|BE458047 NXCI_005_B05_F NXCI (Nsf Xylem Compr... 104 2e-021
gb|BX677592.1|BX677592 BX677592 RN Pinus pinaster cDNA clon... 104 2e-021
gb|BE996829.1|BE996829 NXCI_101_H05_F NXCI (Nsf Xylem Compr... 67 4e-021
>gb|DR167446.1|DR167446 RTPHOS1_18_G10.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_18_G10_A029 5', mRNA sequence
Length = 829
Score = 200 bits (432), Expect(3) = 1e-079
Identities = 85/119 (71%), Positives = 103/119 (86%)
Frame = +3 / +1
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
RE VDDTAGAA+ +A + L+DTGA+AS+ AA++YGL++LA IQDD DNVTRF+MLAREP
Sbjct: 199 REEVDDTAGAAQFIAANNLRDTGAVASARAAEIYGLEILANGIQDDLDNVTRFLMLAREP 378
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDDCSS 902
IIPR D+PFKTSIVF+LE+GP FKALAVFALRDINLTKIESRP ++RPL V +D S+
Sbjct: 379 IIPRIDRPFKTSIVFTLEDGPRIFFKALAVFALRDINLTKIESRPQRKRPLWVVNDTST 555
Score = 135 bits (289), Expect(3) = 3e-050
Identities = 73/112 (65%), Positives = 80/112 (71%)
Frame = -2 / -3
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
T G L G LSIFVRL+SL ANTASALK GPSS KTMLVLNGLS+ GMMGS A+I
Sbjct: 536 THNGRFL*GLLSIFVRLISLRANTASALKKILGPSSRVKTMLVLNGLSILGMMGSLANIK 357
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTAS 548
RVTLS SS*I AR S P AA LA APVS + +A +AAPAVSST+S
Sbjct: 356 NRVTLSKSS*IPFARISRP*ISAARALATAPVSRRLLAAINWAAPAVSSTSS 201
Score = 128 bits (275), Expect(3) = 2e-039
Identities = 54/84 (64%), Positives = 61/84 (72%)
Frame = +3 / +1
Query: 348 LGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLT 527
LGGSIHRNYDLLLRH LHIV EV LAV HCLL PGVK E LK +SHPQAL+QCEHTL+
Sbjct: 4 LGGSIHRNYDLLLRHRLHIVSEVHLAVNHCLLGLPGVKKEELKRVISHPQALSQCEHTLS 183
Query: 528 SLGIEHREAVDDTAGAAKIVAEHM 599
+LG+ E D A I A ++
Sbjct: 184 ALGVIREEVDDTAGAAQFIAANNL 255
Score = 87.2 bits (184), Expect(3) = 1e-079
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +3 / +1
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
FDYLFY+D EASMADP+ QNALG+L+EFATF+RVLGSYP D+
Sbjct: 598 FDYLFYIDFEASMADPRAQNALGHLQEFATFMRVLGSYPMDM 723
Score = 73.5 bits (154), Expect(3) = 3e-022
Identities = 37/117 (31%), Positives = 64/117 (54%)
Frame = -1 / -2
Query: 896 TVIRYPKRPFLMWTTFNLCEVDVPQCKYSKCLKELSRSFF**KDYACLKWFISARYDGFS 717
++I YP+ + +TF LC +D+ K+ KCLK+ SR ++ A L+W +++ DG
Sbjct: 549 SIINYPQWSLSLRSTFYLC*IDIS*SKHCKCLKKNSRPVLKSENDARLEWSVNSWNDGLP 370
Query: 716 S*HHKTGDIIFVILNILSKNIQSIQFSRQRTSNSTSVLEHMFCNNLCCTSSVVNSFS 546
H ++ DI+ +ILN + KN+ +I S T NS V + + L ++N F+
Sbjct: 369 CQH*ESSDIV*IILNSICKNL*TINLSSSSTCNSPCVSKIISRYKLGSPRCIINFFT 199
Score = 57.4 bits (119), Expect(3) = 3e-050
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1 / -2
Query: 521 CVLTLRKSLGMTHSTFQVFNLHARIG**AMANRKANFSYNVQTMPKQKIIIPMYATSQ 348
CVLTLR+SLGM + T ++F LH R A+ N K +F+Y +Q + K+ III + A ++
Sbjct: 177 CVLTLRESLGMAYDTLELFLLHTRKSQKAVINCKVHFTYYMQAVTKK*IIITVNAATK 4
Score = 49.6 bits (102), Expect(3) = 1e-079
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2 / +3
Query: 359 HT*EL*SFASA*FAHCRRSSPCGSPLLISQSWRED*KPEKCYESSPGSCAM*AHINITRN 538
H+ L*S +S+ A+ + S+PC L SW E+ + + C++ SPGS +M*AHI +
Sbjct: 15 HSP*L*STSSSPLAYSK*SAPCS*SLPFGTSWCEEGRAQACHKPSPGSLSM*AHIECFGS 194
Query: 539 *A*RS 553
*RS
Sbjct: 195 YT*RS 209
Score = 46.0 bits (94), Expect(3) = 3e-050
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -2 / -3
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRT NVANS R P+AF* GSAI+A
Sbjct: 719 SIG*LPRTRINVANSCR*PKAF*ARGSAIEA 627
Score = 39.1 bits (79), Expect(3) = 2e-039
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2 / +3
Query: 644 VWIGCSC*EYSG*QR*CHPFYDAXXXXXXXXXXXXI*DKHSLFTRRRTWTAL*GTCCICT 823
+W SC SG* R CH + I D+H + R *GTC +C+
Sbjct: 297 LWSRDSCKWNSG*FRQCHSILNVGKGAHHSKN*QTIQDEHRFHS*GRA*NFF*GTCSVCS 476
Query: 824 EGHQPHKD 847
+ +Q +KD
Sbjct: 477 KRYQSNKD 500
Score = 36.3 bits (73), Expect(3) = 3e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -3 / -1
Query: 1032 *DSFQELLKMLQTPSDFQEHSESLDQPLMLQGQHKKGNQSS 910
*DS E MLQ P+ H E +DQP LQ Q ++ NQS+
Sbjct: 715 *DSCPEPA*MLQIPAGDLRHFELVDQP*KLQSQCRRDNQST 593
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 522 MCAHIAQEPGDDS*HFSGFQSSRQD 448
MCAHI +EPGD *H SS Q+
Sbjct: 178 MCAHIEREPGDGL*HA*ALPSSHQE 104
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +1 / +2
Query: 913 TLITFFMLTLKHQWLIQRLRMLLEI*RSLQHF*EFLEAIL 1032
TLI LTLK WLI L+M R+LQH F AIL
Sbjct: 596 TLIISSTLTLKLLWLIHELKMP*VTCRNLQHLCGFWAAIL 715
>gb|CF476788.1|CF476788 RTWW3_3_B03.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_3_B03_A022 5', mRNA sequence
Length = 598
Score = 187 bits (402), Expect(2) = 2e-077
Identities = 74/119 (62%), Positives = 88/119 (73%)
Frame = +3 / +3
Query: 177 GIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGG 356
G L+VAYQG P CE +PC+ F+ AFQAV+ WVADRAVLP+ENSLGG
Sbjct: 6 GSQLRVAYQGVPGAYSEAAAGKAYPGCEPIPCDQFEAAFQAVELWVADRAVLPVENSLGG 185
Query: 357 SIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSL 533
SIHRNYDLLLRH LHIVGEV+L V HCLL PG + E+++ +SHPQALAQCEHT++ L
Sbjct: 186 SIHRNYDLLLRHRLHIVGEVQLPVHHCLLTLPGTRKEDVRRVISHPQALAQCEHTISKL 362
Score = 123 bits (264), Expect(2) = 2e-077
Identities = 50/72 (69%), Positives = 64/72 (88%)
Frame = +3 / +3
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
RE VDDTAGAA++VAE+ L+DT AIASS AA++YG++++A+ IQDD NVTRF++LAREP
Sbjct: 381 REGVDDTAGAAQMVAENYLRDTAAIASSRAAEIYGMNIIADGIQDDASNVTRFVILAREP 560
Query: 726 IIPRTDKPFKTS 761
IIPR D+PFKTS
Sbjct: 561 IIPRVDRPFKTS 596
Score = 102 bits (218), Expect(2) = 8e-040
Identities = 55/110 (50%), Positives = 59/110 (53%)
Frame = -2 / -1
Query: 520 VCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCMLPPNEF 341
VCSH ARA G LI S PG N+QW T TSPT+ R RS* MLPP+EF
Sbjct: 349 VCSHWARACGWLITRRTSSFLVPGSVNRQWCTGSCTSPTI*SRWRRSRS*LRWMLPPSEF 170
Query: 340 SSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXXXXXXXXAQPW*AT 191
S+GSTA SATQ TA*NA S S G SQ G PW AT
Sbjct: 169 STGSTARSATQSSTA*NAASNWSHGMGSQPGYAFPAAASLYAPGTPWYAT 20
Score = 82.6 bits (174), Expect(2) = 8e-040
Identities = 47/72 (65%), Positives = 50/72 (69%)
Frame = -2 / -1
Query: 763 MLVLNGLSVRGMMGSRASIIKRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSAT 584
MLVLNG S RGM+GSRA I KRVTL SS I SA P AA ELA+A VS SAT
Sbjct: 598 MLVLNGRSTRGMIGSRARITKRVTLLASSWIPSAMIFMP*ISAARELAMAAVSRR*FSAT 419
Query: 583 IFAAPAVSSTAS 548
I+AAPAVSST S
Sbjct: 418 IWAAPAVSSTPS 383
>gb|DR182367.1|DR182367 RTMNUT1_44_C07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_44_C07_A029 5', mRNA sequence
Length = 830
Score = 215 bits (465), Expect(2) = 3e-076
Identities = 90/119 (75%), Positives = 107/119 (89%)
Frame = +3 / +3
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REAVDDTAGAA+ +A + L+DTGA+AS+ AA++YGL +LA+ IQDD DNVTRF+MLAREP
Sbjct: 21 REAVDDTAGAAQFIAANNLRDTGAVASARAAEIYGLQILADGIQDDSDNVTRFLMLAREP 200
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDDCSS 902
IIPR D+PFKTSIVF+LEEGPG LFKALAVFALRDINLTKIESRP ++RPLRV DD ++
Sbjct: 201 IIPRIDRPFKTSIVFTLEEGPGVLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSNT 377
Score = 139 bits (299), Expect(2) = 3e-039
Identities = 74/112 (66%), Positives = 82/112 (73%)
Frame = -2 / -2
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR G L G LSIFVRL+SL+ANTA ALK PGPSS KTMLVLNGLS+ GM+GS A+I
Sbjct: 358 TRNGRFL*GLLSIFVRLISLNANTARALKRTPGPSSRVKTMLVLNGLSILGMIGSLANIK 179
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTAS 548
RVTLS SS*I SAR P AA LA APVS + +A +AAPAVSSTAS
Sbjct: 178 NRVTLSESS*IPSARICRP*ISAARALATAPVSRRLLAAINWAAPAVSSTAS 23
Score = 91.3 bits (193), Expect(2) = 3e-076
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3 / +3
Query: 882 VSDDCSSLLKNFDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
V D + K FDYLFY+D EASMADP+ QNALG+L+EFATF+RVLGSYP D+
Sbjct: 360 VDDSNTGAAKYFDYLFYIDFEASMADPRAQNALGHLQEFATFMRVLGSYPMDM 518
Score = 43.7 bits (89), Expect(2) = 3e-039
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -2 / -2
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRT NVANS R P+AF GSAI+A
Sbjct: 514 SIG*LPRTRINVANSCR*PKAFCARGSAIEA 422
>gb|CF471275.1|CF471275 RTDS1_2_H04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_H04_A015 5', mRNA sequence
Length = 686
Score = 186 bits (400), Expect(3) = 3e-075
Identities = 79/116 (68%), Positives = 97/116 (83%)
Frame = +3 / +2
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ +A + L+DT AIASS AA+LYG+ VL + IQDD +NVTRF+MLAREP
Sbjct: 218 REAFDDTAGAAEFIALNGLRDTAAIASSRAAELYGMSVLFDGIQDDSNNVTRFVMLAREP 397
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDD 893
IIPRTD+PFKTSIVF+ ++G LFK L+ FA R+I+LTKIESRPH+ +PLRV DD
Sbjct: 398 IIPRTDRPFKTSIVFAQDKGTSVLFKVLSAFAFRNISLTKIESRPHRNQPLRVVDD 565
Score = 102 bits (217), Expect(2) = 5e-032
Identities = 63/116 (54%), Positives = 69/116 (59%)
Frame = -2 / -3
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR G L G LSI V+L+ L A L P S TMLVL GLSV GMMGS ASI
Sbjct: 555 TRSGWFL*GLLSILVKLIFLKAKADKTLNKTEVPLS*ANTMLVLKGLSVLGMMGSLASIT 376
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASLCSI 536
KRVTL LSS + S RT P S AA ELA+A VS A AAPAVSS AS ++
Sbjct: 375 KRVTLLLSSWMPSNRTLIP*SSAARELAMAAVSRRPLRAMNSAAPAVSSKASRATL 208
Score = 82.2 bits (173), Expect(3) = 3e-075
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +3 / +3
Query: 342 NSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVK 461
+SLGGSIHRNYDLLLRH LHIVGEV+L V HCLLA PGV+
Sbjct: 12 DSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVR 131
Score = 57.0 bits (118), Expect(2) = 5e-032
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -2 / -2
Query: 472 RFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCMLPPNE 344
+ S TPG A +Q T TSPTM L RS+RS*FLCMLPP+E
Sbjct: 142 QISFLTPGSARRQ**TGN*TSPTMWSL*RSRRS*FLCMLPPSE 14
Score = 54.2 bits (112), Expect(3) = 3e-075
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +3 / +2
Query: 909 KNFDYLFYVDLEASMADPKTQNALGNLKEFATF 1007
K+F+Y+FYVD EASMAD + QNAL ++EF +F
Sbjct: 587 KHFEYMFYVDFEASMADTRAQNALQEVQEFTSF 685
>gb|DR071484.1|DR071484 RTDK1_20_E02.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_20_E02_A029 3', mRNA sequence
Length = 782
Score = 193 bits (417), Expect(2) = 9e-068
Identities = 81/116 (69%), Positives = 99/116 (85%)
Frame = +3 / +1
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
RE VDDTAGAA++VAE+ L+DT AIASS AA++YG++++A+ IQDD NVTRF++LAREP
Sbjct: 16 REGVDDTAGAAQMVAENYLRDTAAIASSRAAEIYGMNIIADGIQDDASNVTRFVILAREP 195
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDD 893
IIPR D+PFKTSIVF+ +EG G LFK LA FA RDI+LTKIESRP + RPLRV DD
Sbjct: 196 IIPRVDRPFKTSIVFAQDEGTGILFKVLAAFAFRDISLTKIESRPQRNRPLRVVDD 363
Score = 131 bits (281), Expect(2) = 1e-035
Identities = 72/112 (64%), Positives = 75/112 (66%)
Frame = -2 / -1
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR G LCG LSIFVRLMS A A LK P PSS KTMLVLNG S RGM+GSRA I
Sbjct: 353 TRSGRFLCGLLSIFVRLMSRKAKAARTLKRIPVPSSCAKTMLVLNGRSTRGMIGSRARIT 174
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTAS 548
KRVTL SS I SA P AA ELA+A VS SATI+AAPAVSST S
Sbjct: 173 KRVTLLASSWIPSAMIFMP*ISAARELAMAAVSRR*FSATIWAAPAVSSTPS 18
Score = 84.9 bits (179), Expect(2) = 9e-068
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +3 / +1
Query: 882 VSDDCSSLLKNFDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDVNEP 1049
V D K F+YLFY+D EASMADP+ QNAL L+EF FLRVLGSYP D++ P
Sbjct: 355 VDDSNLGNAKYFEYLFYIDFEASMADPRAQNALAELQEFTNFLRVLGSYPMDISPP 522
Score = 39.6 bits (80), Expect(2) = 1e-035
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2 / -1
Query: 1048 GSFTSVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
G S+G*LP TL+ + NS RAF* GSA++A
Sbjct: 521 GGLMSMG*LPSTLRKLVNSCSSARAF*ALGSAMEA 417
>gb|DR055256.1|DR055256 RTCA1_22_C01.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_22_C01_A029 5', mRNA sequence
Length = 729
Score = 187 bits (403), Expect(2) = 8e-064
Identities = 78/116 (67%), Positives = 98/116 (84%)
Frame = +3 / +1
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ VA + L+DT +IAS+ AA++YG+++LA+ IQDD NVTRF+MLAREP
Sbjct: 118 REAFDDTAGAAEFVAANDLRDTASIASARAAEIYGMNILADGIQDDVGNVTRFVMLAREP 297
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDD 893
+IPRTD+PFKTSIVF+ EEG G LFK L+ FA R+INLTKIESRP + +P+RV DD
Sbjct: 298 VIPRTDRPFKTSIVFAHEEGTGVLFKVLSAFAFRNINLTKIESRPQRSKPVRVVDD 465
Score = 106 bits (226), Expect(3) = 8e-035
Identities = 61/116 (52%), Positives = 70/116 (60%)
Frame = -2 / -2
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR GL LCG LSI VRL+ L A LK P PSS T+LVL G SV G+ GSRAS+
Sbjct: 455 TRTGLLLCGLLSILVRLIFLKAKAERTLKRTPVPSSWANTILVLKGRSVLGITGSRASMT 276
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASLCSI 536
VT SS*+ SAR P AA LA+ VS +AT AAPAVSS ASL ++
Sbjct: 275 NLVTFPTSS*MPSARIFMP*ISAARALAMEAVSLRSFAATNSAAPAVSSKASLATL 108
Score = 78.0 bits (164), Expect(2) = 8e-064
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
F+Y+FYVD EASMA+P+ QNAL ++EF TFLRVLGSYP D+
Sbjct: 493 FEYIFYVDFEASMANPRAQNALAEVQEFTTFLRVLGSYPMDI 618
Score = 46.0 bits (94), Expect(3) = 8e-035
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQ 434
P V V SH ARAWG L+ RFS FTPG A++Q
Sbjct: 104 PMRVRVFSHWARAWGWLMTRLRFSGFTPGRASRQ 3
Score = 34.1 bits (68), Expect(3) = 8e-035
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / -2
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRTL+ V NS RAF G A++A
Sbjct: 614 SMG*LPRTLRKVVNS*TSARAFCARGLAMEA 522
>gb|CF668420.1|CF668420 RTCNT1_36_H09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_H09_A029 3', mRNA sequence
Length = 693
Score = 187 bits (403), Expect(2) = 8e-064
Identities = 78/116 (67%), Positives = 98/116 (84%)
Frame = +3 / +3
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ VA + L+DT +IAS+ AA++YG+++LA+ IQDD NVTRF+MLAREP
Sbjct: 18 REAFDDTAGAAEFVAANDLRDTASIASARAAEIYGMNILADGIQDDVGNVTRFVMLAREP 197
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDD 893
+IPRTD+PFKTSIVF+ EEG G LFK L+ FA R+INLTKIESRP + +P+RV DD
Sbjct: 198 VIPRTDRPFKTSIVFAHEEGTGVLFKVLSAFAFRNINLTKIESRPQRSKPVRVVDD 365
Score = 106 bits (226), Expect(2) = 2e-026
Identities = 61/116 (52%), Positives = 70/116 (60%)
Frame = -2 / -3
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR GL LCG LSI VRL+ L A LK P PSS T+LVL G SV G+ GSRAS+
Sbjct: 355 TRTGLLLCGLLSILVRLIFLKAKAERTLKRTPVPSSWANTILVLKGRSVLGITGSRASMT 176
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASLCSI 536
VT SS*+ SAR P AA LA+ VS +AT AAPAVSS ASL ++
Sbjct: 175 NLVTFPTSS*MPSARIFMP*ISAARALAMEAVSLRSFAATNSAAPAVSSKASLATL 8
Score = 78.0 bits (164), Expect(2) = 8e-064
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
F+Y+FYVD EASMA+P+ QNAL ++EF TFLRVLGSYP D+
Sbjct: 393 FEYIFYVDFEASMANPRAQNALAEVQEFTTFLRVLGSYPMDI 518
Score = 34.1 bits (68), Expect(2) = 2e-026
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / -3
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRTL+ V NS RAF G A++A
Sbjct: 514 SMG*LPRTLRKVVNS*TSARAFCARGLAMEA 422
>gb|BX253771.1|BX253771 BX253771 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP088C10, mRNA sequence
Length = 634
Score = 186 bits (400), Expect(2) = 2e-063
Identities = 77/116 (66%), Positives = 98/116 (84%)
Frame = +3 / +1
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ VA + L++T +IAS+ AA++YG+++LA+ IQDD NVTRF+MLAREP
Sbjct: 79 REAFDDTAGAAEFVAANNLRETASIASARAAEIYGMNILADGIQDDVGNVTRFVMLAREP 258
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDD 893
+IPRTD+PFKTSIVF+ EEG G LFK L+ FA R+INLTKIESRP + +P+RV DD
Sbjct: 259 VIPRTDRPFKTSIVFAHEEGTGVLFKVLSAFAFRNINLTKIESRPQRSKPVRVVDD 426
Score = 110 bits (234), Expect(3) = 4e-030
Identities = 62/116 (53%), Positives = 72/116 (62%)
Frame = -2 / -3
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR GL LCG LSI VRL+ L A S LK P PSS T+LVL G SV G+ GSRAS+
Sbjct: 416 TRTGLLLCGLLSILVRLIFLKAKAESTLKRTPVPSSWANTILVLKGRSVLGITGSRASMT 237
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASLCSI 536
VT SS*+ SAR P AA LA+ VS + +AT AAPAVSS ASL ++
Sbjct: 236 NLVTFPTSS*MPSARIFMP*ISAARALAMDAVSLRLFAATNSAAPAVSSKASLATL 69
Score = 78.0 bits (164), Expect(2) = 2e-063
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
F+Y+FYVD EASMA+P+ QNAL ++EF TFLRVLGSYP D+
Sbjct: 454 FEYIFYVDFEASMANPRAQNALAEVQEFTTFLRVLGSYPMDI 579
Score = 34.1 bits (68), Expect(3) = 4e-030
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / -3
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRTL+ V NS RAF G A++A
Sbjct: 575 SMG*LPRTLRKVVNS*TSARAFCARGLAMEA 483
Score = 26.3 bits (51), Expect(3) = 4e-030
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 535 PSDVNVCSHCARAWG*LI 482
P V V SH ARAWG L+
Sbjct: 65 PMRVRVFSHWARAWGWLM 12
>gb|DR024424.1|DR024424 STRS1_64_H01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_H01_A034 5', mRNA sequence
Length = 780
Score = 186 bits (400), Expect(2) = 1e-062
Identities = 79/116 (68%), Positives = 97/116 (83%)
Frame = +3 / +1
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ +A + L+DT AIASS AA+LYG+ VL + IQDD +NVTRF+MLAREP
Sbjct: 100 REAFDDTAGAAEFIALNGLRDTAAIASSRAAELYGMSVLFDGIQDDSNNVTRFVMLAREP 279
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDD 893
IIPRTD+PFKTSIVF+ ++G LFK L+ FA R+I+LTKIESRPH+ +PLRV DD
Sbjct: 280 IIPRTDRPFKTSIVFAQDKGTSVLFKVLSAFAFRNISLTKIESRPHRNQPLRVVDD 447
Score = 102 bits (217), Expect(2) = 6e-025
Identities = 63/116 (54%), Positives = 69/116 (59%)
Frame = -2 / -2
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR G L G LSI V+L+ L A L P S TMLVL GLSV GMMGS ASI
Sbjct: 437 TRSGWFL*GLLSILVKLIFLKAKADKTLNKTEVPLS*ANTMLVLKGLSVLGMMGSLASIT 258
Query: 703 KRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASLCSI 536
KRVTL LSS + S RT P S AA ELA+A VS A AAPAVSS AS ++
Sbjct: 257 KRVTLLLSSWMPSNRTLIP*SSAARELAMAAVSRRPLRAMNSAAPAVSSKASRATL 90
Score = 75.8 bits (159), Expect(2) = 1e-062
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 909 KNFDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
K+F+Y+FYVD EASMAD + QNAL ++EF +FLRVLGSYP D+
Sbjct: 469 KHFEYMFYVDFEASMADTRAQNALQEVQEFTSFLRVLGSYPMDM 600
Score = 33.1 bits (66), Expect(2) = 6e-025
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -2 / -2
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRTL+ NS+ RAF SA++A
Sbjct: 596 SIG*LPRTLRKEVNSWTS*RAFWALVSAMEA 504
>gb|CF479056.1|CF479056 RTWW3_21_E08.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_21_E08_A022 5', mRNA sequence
Length = 745
Score = 198 bits (426), Expect(2) = 3e-055
Identities = 84/154 (54%), Positives = 99/154 (64%)
Frame = +3 / +3
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T M ++VAYQG P CE VPC+ F+ AFQAV+ WV
Sbjct: 30 PLSVTDLAAMPSRESQVRVAYQGVSGAYSEAAALKAYPCCEAVPCKEFEAAFQAVELWVV 209
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
D+AVLP+ENSLGGSIHRNYDLLLRH LHIV EV LAV HCLL PGVK E LK +SHPQ
Sbjct: 210 DKAVLPIENSLGGSIHRNYDLLLRHRLHIVSEVHLAVNHCLLGLPGVKKEELKRVISHPQ 389
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAAKIVAEHM 599
AL+QCEHTL++LG+ E D A I A ++
Sbjct: 390 ALSQCEHTLSALGVIREEVDDTAGAAQFIAANNL 491
Score = 182 bits (391), Expect(2) = 1e-058
Identities = 77/103 (74%), Positives = 91/103 (88%)
Frame = +3 / +3
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
RE VDDTAGAA+ +A + L+DTGA+AS+ AA++YGL++LA IQDD DNVTRF+MLAREP
Sbjct: 435 REEVDDTAGAAQFIAANNLRDTGAVASARAAEIYGLEILANGIQDDLDNVTRFLMLAREP 614
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIES 854
IIPR D+PFKTSIVF+LE+GP FKALAVFALRDINLTKIES
Sbjct: 615 IIPRIDRPFKTSIVFTLEDGPRIFFKALAVFALRDINLTKIES 743
Score = 130 bits (278), Expect(2) = 2e-049
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = -2 / -1
Query: 853 LSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASIIKRVTLSLSS* 674
LSIFVRL+SL ANTASALK GPSS KTMLVLNGLS+ GMMGS A+I RVTLS SS*
Sbjct: 742 LSIFVRLISLRANTASALKKILGPSSRVKTMLVLNGLSILGMMGSLANIKNRVTLSKSS* 563
Query: 673 IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTAS 548
I AR S P AA LA APVS + +A +AAPAVSST+S
Sbjct: 562 IPFARISRP*ISAARALATAPVSRRLLAAINWAAPAVSSTSS 437
Score = 107 bits (229), Expect = 2e-022
Identities = 65/151 (43%), Positives = 74/151 (49%)
Frame = -2 / -1
Query: 589 ATIFAAPAVSSTASLCSIPSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTS 410
A I A S+ S P +NVCSH RAWG L+ S FTPG +Q TAR TS
Sbjct: 481 AAINWAAPAVSSTSSRITPKALNVCSH*ERAWGWLMTRLSSSFFTPGSPKRQ*LTARCTS 302
Query: 409 PTMCKLCRSKRS*FLCMLPPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXX 230
T+CK R RS* MLPP+EFS G TALS T TA NA S QGT SQ G
Sbjct: 301 LTICKR*RRSRS*LR*MLPPSEFSIGKTALSTTHSSTAWNAASNSLQGTASQHG*AFNAA 122
Query: 229 XXXXXXAQPW*ATLRTIPSTSMTSALVSGRG 137
P *AT + + V+ RG
Sbjct: 121 ASLYAPETP**ATRT*DSRLGIAARSVTDRG 29
Score = 87.2 bits (184), Expect(2) = 2e-049
Identities = 41/110 (37%), Positives = 64/110 (58%)
Frame = -1 / -3
Query: 521 CVLTLRKSLGMTHSTFQVFNLHARIG**AMANRKANFSYNVQTMPKQKIIIPMYATSQ*I 342
CVLTLR+SLGM + T ++F LH R A+ N K +F+Y +Q + K+ III + A ++*I
Sbjct: 413 CVLTLRESLGMAYDTLELFLLHTRKSQKAVINCKVHFTYYMQAVTKK*IIITVNAATK*I 234
Query: 341 LKWQYGPISYPVLNSLKCSVEVLTGHSLTIRVRLLCCCFAVRSSTTLVSN 192
Q ++ P N L+C ++ +SLT + CC V S +L+ +
Sbjct: 233 FNRQNSFVNNPQFNCLECRFKLFARNSLTTWISFQCCSLTVCSRNSLIGH 84
Score = 66.6 bits (139), Expect(2) = 1e-058
Identities = 44/117 (37%), Positives = 56/117 (47%)
Frame = +1 / +1
Query: 202 RVVLERTAKXXXXXXTRIVRLCPVSTSTLHFRLFKTG*LIGPYCHLRIHWEVAYIGIMIF 381
R LE T + +VRL + H R G L +C L+IH A+ IMI+
Sbjct: 94 REFLEHTVRLQH*KLIHVVRLFLAKSLKRHSRQLNCGLLTKLFCLLKIHLVAAFTVIMIY 273
Query: 382 CFGIVCTL*EKFALRFAIAY*PILA*RLKT*KVL*VIPRLLRNVSTH*HH*ELSIEK 552
F C * K L+ A+ L *R K+ V * IPRL NVSTH* EL ++K
Sbjct: 274 FFVTACI**VKCTLQLITAFWDFLV*RRKSSSVS*AIPRLSLNVSTH*VLWELYVKK 444
Score = 65.7 bits (137), Expect(3) = 5e-022
Identities = 34/103 (33%), Positives = 56/103 (54%)
Frame = -1 / -3
Query: 854 TFNLCEVDVPQCKYSKCLKELSRSFF**KDYACLKWFISARYDGFSS*HHKTGDIIFVIL 675
TF LC +D+ K+ KCLK+ SR ++ A L+W +++ DG H ++ DI+ +IL
Sbjct: 743 TFYLC*IDIS*SKHCKCLKKNSRPVLKSENDARLEWSVNSWNDGLPCQH*ESSDIV*IIL 564
Query: 674 NILSKNIQSIQFSRQRTSNSTSVLEHMFCNNLCCTSSVVNSFS 546
N + KN+ +I S T NS V + + L ++N F+
Sbjct: 563 NSICKNL*TINLSSSSTCNSPCVSKIISRYKLGSPRCIINFFT 435
Score = 43.2 bits (88), Expect(3) = 5e-022
Identities = 26/76 (34%), Positives = 36/76 (47%)
Frame = -3 / -2
Query: 423 QGELLLQCANYAEAKDHNSYVCYLPMNSQVAVRPYQLPSFEQPEMQCRSAHRAQSHNSGT 244
QG L L A+ E DHN C +N Q A + Q P+ + P M ++ + Q HN
Sbjct: 315 QGALHLLYASGDEEVDHNYGECCHQVNFQ*AKQLCQQPTVQLPGMPLQTLCKEQPHNMDK 136
Query: 243 PSLLLLRCTLQHNPGK 196
S+L C LQ P +
Sbjct: 135 LSMLQPHCMLQKLPDR 88
Score = 39.1 bits (79), Expect(2) = 3e-055
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2 / +2
Query: 644 VWIGCSC*EYSG*QR*CHPFYDAXXXXXXXXXXXXI*DKHSLFTRRRTWTAL*GTCCICT 823
+W SC SG* R CH + I D+H + R *GTC +C+
Sbjct: 533 LWSRDSCKWNSG*FRQCHSILNVGKGAHHSKN*QTIQDEHRFHS*GRA*NFF*GTCSVCS 712
Query: 824 EGHQPHKD 847
+ +Q +KD
Sbjct: 713 KRYQSNKD 736
Score = 34.1 bits (68), Expect(3) = 5e-022
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3 / -2
Query: 522 MCAHIAQEPGDDS*HFSGFQSSRQD 448
MCAHI +EPGD *H SS Q+
Sbjct: 414 MCAHIEREPGDGL*HA*ALPSSHQE 340
>gb|DR097253.1|DR097253 STRR1_33_B12.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_B12_A033 5', mRNA sequence
Length = 898
Score = 74.8 bits (157), Expect(6) = 2e-056
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +3 / +3
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAR 719
EAVD+ A AA+ VAE+ + DT I S +AA+ YGL+V+ E IQDD N TRF++L +
Sbjct: 294 EAVDNAASAARFVAENSIDDTAVIGSQIAAREYGLEVVEEEIQDDSSNTTRFLILGK 464
Score = 73.5 bits (154), Expect(6) = 2e-056
Identities = 27/44 (61%), Positives = 39/44 (88%)
Frame = +3 / +3
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ F+L+EG G LFKAL++FA+RDI +TKIESRP +++PLR+
Sbjct: 507 KTTVAFALKEGTGDLFKALSIFAVRDITVTKIESRPQRQKPLRM 638
Score = 60.2 bits (125), Expect(6) = 2e-056
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3 / +3
Query: 282 DTAFQAVQNWVADRAVLPLENSLGGSIHRNYDLLLRH 392
D+AF+A+++ ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 24 DSAFEALESNDADRAVVPVENSLDGVIERNYDLMLRH 134
Score = 43.2 bits (88), Expect(6) = 2e-056
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3 / +3
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K +LK+ +SHPQALA C+ LT+LG+E
Sbjct: 207 KRRSLKTVVSHPQALAHCQQRLTALGVE 290
Score = 34.1 bits (68), Expect(6) = 2e-056
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +3
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPGV 458
+L LH+VGE+ L + HCLLA G+
Sbjct: 123 MLRHPDLHVVGELLLPINHCLLAVRGM 203
Score = 27.2 bits (53), Expect(6) = 2e-056
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3 / +3
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKE 995
F+Y+F+VDLEA D + L++
Sbjct: 681 FEYVFFVDLEAPATDDNPDSLQRGLEQ 761
>gb|CO366259.1|CO366259 RTK1_26_G01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_26_G01_A029 5', mRNA sequence
Length = 804
Score = 74.8 bits (157), Expect(6) = 2e-056
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +3 / +3
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAR 719
EAVD+ A AA+ VAE+ + DT I S +AA+ YGL+V+ E IQDD N TRF++L +
Sbjct: 438 EAVDNAASAARFVAENSIDDTAVIGSQIAAREYGLEVVEEEIQDDSSNTTRFLILGK 608
Score = 73.5 bits (154), Expect(6) = 2e-056
Identities = 27/44 (61%), Positives = 39/44 (88%)
Frame = +3 / +3
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ F+L+EG G LFKAL++FA+RDI +TKIESRP +++PLR+
Sbjct: 651 KTTVAFALKEGTGDLFKALSIFAVRDITVTKIESRPQRQKPLRM 782
Score = 60.2 bits (125), Expect(6) = 2e-056
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3 / +3
Query: 282 DTAFQAVQNWVADRAVLPLENSLGGSIHRNYDLLLRH 392
D+AF+A+++ ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 168 DSAFEALESNDADRAVVPVENSLDGVIERNYDLMLRH 278
Score = 43.2 bits (88), Expect(6) = 2e-056
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3 / +3
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K +LK+ +SHPQALA C+ LT+LG+E
Sbjct: 351 KRRSLKTVVSHPQALAHCQQRLTALGVE 434
Score = 34.1 bits (68), Expect(6) = 2e-056
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +3
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPGV 458
+L LH+VGE+ L + HCLLA G+
Sbjct: 267 MLRHPDLHVVGELLLPINHCLLAVRGM 347
Score = 26.7 bits (52), Expect(6) = 2e-056
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = +3 / +3
Query: 177 GIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCE 275
G ++VAYQG C+ +PCE
Sbjct: 60 GKPMRVAYQGVRGSYCQEAAVRAFQRCDALPCE 158
>gb|BX253806.1|BX253806 BX253806 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP088G05, mRNA sequence
Length = 614
Score = 142 bits (304), Expect(2) = 2e-054
Identities = 58/119 (48%), Positives = 77/119 (64%)
Frame = +3 / +1
Query: 186 LKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGGSIH 365
++VAYQG P CE VPC+ ++ A AV++ ADRA+LP+E +L G+
Sbjct: 22 VRVAYQGIPGAFSEAAATTAHPGCEGVPCKGYEDAIWAVESRKADRAILPVEGTLEGNAV 201
Query: 366 RNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIE 542
RNYDLLL HSL+IV E+RL V +CLL PGV+ E ++ MSHP ALA C H L LG++
Sbjct: 202 RNYDLLLHHSLYIVEEIRLFVNYCLLVAPGVRKEQVRRVMSHPMALAHCSHGLKKLGLD 378
Score = 92.3 bits (195), Expect(2) = 2e-054
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +3 / +1
Query: 531 LGIEHREAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMM 710
L + REAVDDTAGAA+ V L+DT AIAS AA++YGLDV+A N+QD+ NVTRF++
Sbjct: 373 LDVVTREAVDDTAGAAEFVHSRGLRDTAAIASCRAAEIYGLDVVARNVQDEPWNVTRFLV 552
Query: 711 LAREP 725
LAR+P
Sbjct: 553 LARQP 567
>gb|CV031359.1|CV031359 RTNACL1_1_C09.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_1_C09_A029 3', mRNA sequence
Length = 591
Score = 141 bits (302), Expect(2) = 6e-054
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +3 / +1
Query: 690 NVTRFMMLAREPIIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKE 869
NVTRF+MLAREPIIPR D+PFKTSIVF+LEEGPG LFKALAVFALRDINLTKIESRP ++
Sbjct: 1 NVTRFLMLAREPIIPRIDRPFKTSIVFTLEEGPGVLFKALAVFALRDINLTKIESRPQRK 180
Query: 870 RPLRVSDDCSS 902
RPLRV DD ++
Sbjct: 181 RPLRVVDDSNT 213
Score = 94.1 bits (199), Expect(2) = 1e-025
Identities = 45/64 (70%), Positives = 50/64 (78%)
Frame = -2 / -2
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
TR G L G LSIFVRL+SL+ANTA ALK PGPSS KTMLVLNGLS+ GM+GS A+I
Sbjct: 194 TRNGRFL*GLLSIFVRLISLNANTARALKRTPGPSSRVKTMLVLNGLSILGMIGSLANIK 15
Query: 703 KRVT 692
RVT
Sbjct: 14 NRVT 3
Score = 91.3 bits (193), Expect(2) = 6e-054
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3 / +1
Query: 882 VSDDCSSLLKNFDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
V D + K FDYLFY+D EASMADP+ QNALG+L+EFATF+RVLGSYP D+
Sbjct: 196 VDDSNTGAAKYFDYLFYIDFEASMADPRAQNALGHLQEFATFMRVLGSYPMDM 354
Score = 43.7 bits (89), Expect(2) = 1e-025
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -2 / -2
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRT NVANS R P+AF GSAI+A
Sbjct: 350 SIG*LPRTRINVANSCR*PKAFCARGSAIEA 258
>gb|CV034364.1|CV034364 RTNACL1_40_A11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_A11_A029 5', mRNA sequence
Length = 810
Score = 138 bits (297), Expect(2) = 2e-053
Identities = 59/76 (77%), Positives = 67/76 (88%)
Frame = +3 / -3
Query: 675 QDDKDNVTRFMMLAREPIIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIES 854
QDD DNVTRF+MLAREPIIPR D+PFKTSIVF+LE+GP FKALAVFALRDINLTKIES
Sbjct: 808 QDDLDNVTRFLMLAREPIIPRIDRPFKTSIVFTLEDGPRIFFKALAVFALRDINLTKIES 629
Query: 855 RPHKERPLRVSDDCSS 902
RP ++RPL V +D S+
Sbjct: 628 RPQRKRPLWVVNDTST 581
Score = 97.7 bits (207), Expect(2) = 2e-027
Identities = 50/70 (71%), Positives = 53/70 (75%)
Frame = -2 / +3
Query: 883 TRRGLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASII 704
T G L G LSIFVRL+SL ANTASALK GPSS KTMLVLNGLS+ GMMGS A+I
Sbjct: 600 THNGRFL*GLLSIFVRLISLRANTASALKKILGPSSRVKTMLVLNGLSILGMMGSLANIK 779
Query: 703 KRVTLSLSS* 674
RVTLS SS*
Sbjct: 780 NRVTLSKSS* 809
Score = 92.3 bits (195), Expect(2) = 2e-053
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = +3 / -3
Query: 882 VSDDCSSLLKNFDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
V+D + K FDYLFY+D EASMADP+ QNALG+L+EFATF+RVLGSYP D+
Sbjct: 598 VNDTSTGAAKYFDYLFYIDFEASMADPRAQNALGHLQEFATFMRVLGSYPMDM 440
Score = 46.0 bits (94), Expect(2) = 2e-027
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -2 / +3
Query: 1036 SVG*LPRTLKNVANSFRFPRAF*VFGSAIDA 944
S+G*LPRT NVANS R P+AF* GSAI+A
Sbjct: 444 SIG*LPRTRINVANSCR*PKAF*ARGSAIEA 536
>gb|CO159142.1|CO159142 FLD1_11_E04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_11_E04_A029 5', mRNA sequence
Length = 733
Score = 72.1 bits (151), Expect(6) = 2e-053
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +3 / +1
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
EAVD+ A AA+ VAE+ + DT I S +A + YGL+V+ E +QDD N TRF++L ++
Sbjct: 391 EAVDNAASAARFVAENRIDDTAVIGSEIAGREYGLEVVEEEMQDDSSNATRFLILTKK 564
Score = 68.9 bits (144), Expect(6) = 2e-053
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA+RDI +TKIESRP +E PLR+
Sbjct: 601 KTTVAFSLKEGTADLCKALSIFAVRDIKVTKIESRPQRENPLRM 732
Score = 58.8 bits (122), Expect(6) = 2e-053
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +3 / +1
Query: 282 DTAFQAVQNWVADRAVLPLENSLGGSIHRNYDLLLRH 392
++AF+A+++ ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 121 ESAFEALESDAADRAVVPVENSLDGVIGRNYDLMLRH 231
Score = 38.6 bits (78), Expect(6) = 2e-053
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +1
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L +LG+E
Sbjct: 304 KRRTLKRVISHPQALAHCQRCLGALGVE 387
Score = 35.4 bits (71), Expect(6) = 2e-053
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3 / +1
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPGVK 461
+L LH+VGEV L + HCLLA G +
Sbjct: 220 MLRHPDLHVVGEVLLRINHCLLAVRGAE 303
Score = 28.6 bits (56), Expect(6) = 2e-053
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3 / +1
Query: 174 DGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCE 275
+G +KVAYQG C+ +PCE
Sbjct: 10 EGKSVKVAYQGVRGSYCQEAAVRAFQRCDALPCE 111
>gb|CF402352.1|CF402352 RTWW1_19_B02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_19_B02_A015 5', mRNA sequence
Length = 695
Score = 74.8 bits (157), Expect(6) = 3e-053
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +3 / +1
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAR 719
EAVD+ A AA+ VAE+ + DT I S +AA+ YGL+V+ E IQDD N TRF++L +
Sbjct: 235 EAVDNAASAARFVAENSIDDTAVIGSQIAAREYGLEVVEEEIQDDSSNTTRFLILGK 405
Score = 73.5 bits (154), Expect(6) = 3e-053
Identities = 27/44 (61%), Positives = 39/44 (88%)
Frame = +3 / +1
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ F+L+EG G LFKAL++FA+RDI +TKIESRP +++PLR+
Sbjct: 448 KTTVAFALKEGTGDLFKALSIFAVRDITVTKIESRPQRQKPLRM 579
Score = 49.2 bits (101), Expect(6) = 3e-053
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +3 / +1
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRH 392
DRAV+P+ENSL G I RNYDL+LRH
Sbjct: 1 DRAVVPVENSLDGVIERNYDLMLRH 75
Score = 43.2 bits (88), Expect(6) = 3e-053
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K +LK+ +SHPQALA C+ LT+LG+E
Sbjct: 148 KRRSLKTVVSHPQALAHCQQRLTALGVE 231
Score = 34.1 bits (68), Expect(6) = 3e-053
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +1
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPGV 458
+L LH+VGE+ L + HCLLA G+
Sbjct: 64 MLRHPDLHVVGELLLPINHCLLAVRGM 144
Score = 26.7 bits (52), Expect(6) = 3e-053
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / +1
Query: 915 FDYLFYVDLEASMAD 959
F+Y+F+VDLEA D
Sbjct: 622 FEYVFFVDLEAPATD 666
>gb|CF402449.1|CF402449 RTWW1_17_E05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_17_E05_A015 5', mRNA sequence
Length = 794
Score = 72.1 bits (151), Expect(6) = 5e-053
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
EAVD+ A AA+ VAE+ + DT I S +A + YGL+V+ E +QDD N TRF++L ++
Sbjct: 266 EAVDNAASAARFVAENRIDDTAVIGSEIAGREYGLEVVEEEMQDDSSNATRFLILTKK 439
Score = 68.9 bits (144), Expect(6) = 5e-053
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA+RDI +TKIESRP +E PLR+
Sbjct: 476 KTTVAFSLKEGTADLCKALSIFAVRDIKVTKIESRPQRENPLRM 607
Score = 57.4 bits (119), Expect(6) = 5e-053
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +3 / +2
Query: 288 AFQAVQNWVADRAVLPLENSLGGSIHRNYDLLLRH 392
AF+A+++ ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 2 AFEALESDAADRAVVPVENSLDGVIGRNYDLMLRH 106
Score = 38.6 bits (78), Expect(6) = 5e-053
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L +LG+E
Sbjct: 179 KRRTLKRVISHPQALAHCQRCLGALGVE 262
Score = 35.4 bits (71), Expect(6) = 5e-053
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPGVK 461
+L LH+VGEV L + HCLLA G +
Sbjct: 95 MLRHPDLHVVGEVLLRINHCLLAVRGAE 178
Score = 28.6 bits (56), Expect(6) = 5e-053
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 915 FDYLFYVDLEASMAD 959
F+Y+F+VDLEA AD
Sbjct: 650 FEYVFFVDLEAPAAD 694
>gb|DR022115.1|DR022115 STRS1_49_A06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_A06_A034 3', mRNA sequence
Length = 757
Score = 92.3 bits (195), Expect(4) = 9e-052
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +3 / +3
Query: 531 LGIEHREAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMM 710
L + REAVDDTAGAA+ V L+DT AIAS AA++YGLDV+A N+QD+ NVTRF++
Sbjct: 114 LDVVTREAVDDTAGAAEFVHSRGLRDTAAIASCRAAEIYGLDVVARNVQDEPWNVTRFLV 293
Query: 711 LAREP 725
LAR+P
Sbjct: 294 LARQP 308
Score = 62.9 bits (131), Expect(4) = 9e-052
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3 / +3
Query: 870 RPLRVSDDCSSLLKNFDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSY 1028
R L + + ++ F+Y+FY+D EAS ADP Q AL ++ FATF+RVLG Y
Sbjct: 492 RVLDIDAKGGAAVRQFEYVFYIDFEASEADPHAQRALEEVRRFATFVRVLGCY 650
Score = 54.2 bits (112), Expect(4) = 9e-052
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3 / +3
Query: 426 VRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIE 542
V +CLL PGV+ E ++ MSHP ALA C H L LG++
Sbjct: 3 VNYCLLVAPGVRKEQVRRVMSHPMALAHCSHGLKKLGLD 119
Score = 52.4 bits (108), Expect(4) = 9e-052
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +3 / +3
Query: 741 DKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSD 890
D+ +KTSIV + E G L K L+VF+ +I+LTK+E P PLRV D
Sbjct: 354 DRAWKTSIVIAHEGGLDVLLKLLSVFSFHNISLTKLEVNPQGSAPLRVLD 503
>gb|CF668505.1|CF668505 RTCNT1_36_H09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_H09_A029 5', mRNA sequence
Length = 794
Score = 199 bits (430), Expect = 3e-050
Identities = 83/147 (56%), Positives = 99/147 (67%)
Frame = +3 / +2
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T + G L+VAYQG P+CE +PC+ F+ AFQAV+ W+A
Sbjct: 86 PLSITDLAPAPMHGSHLRVAYQGVPGAYSEAAATKAYPSCEPIPCDQFEVAFQAVELWIA 265
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
DRAVLP+ENSLGGSIHRNYDLLLRHSLHIVGEV+ V HCLLA PGVK ENL+ +SHPQ
Sbjct: 266 DRAVLPVENSLGGSIHRNYDLLLRHSLHIVGEVQFPVHHCLLALPGVKPENLRRVISHPQ 445
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAA 578
ALAQCE+TLT +G+ D A
Sbjct: 446 ALAQCENTLTLMGLNVAREAFDDTAGA 526
Score = 159 bits (342), Expect(2) = 2e-050
Identities = 67/99 (67%), Positives = 84/99 (84%)
Frame = +3 / +2
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ VA + L+DT +IAS+ AA++YG+++LA+ IQDD NVTRF+MLAREP
Sbjct: 497 REAFDDTAGAAEFVAANDLRDTASIASARAAEIYGMNILADGIQDDVGNVTRFVMLAREP 676
Query: 726 IIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLT 842
+IPRTD+PFKTSIVF+ EEG G LFK L+ FA R+INLT
Sbjct: 677 VIPRTDRPFKTSIVFAHEEGTGVLFKVLSAFAFRNINLT 793
Score = 137 bits (294), Expect(2) = 5e-051
Identities = 71/133 (53%), Positives = 76/133 (57%)
Frame = -2 / -3
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P V V SH ARAWG L+ RFS FTPG A++QW T TSPTMC RS RS*FLCML
Sbjct: 483 PMRVRVFSHWARAWGWLMTRLRFSGFTPGRASRQWCTGN*TSPTMCSEWRSNRS*FLCML 304
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXXXXXXXXAQPW*ATLRTIP 176
PP EFS+G TALSA Q TA* A S SQG SQ G PW*AT R P
Sbjct: 303 PPKEFSTGRTALSAIQSSTA*KATSNWSQGMGSQEG*AFVAAASL*APGTPW*ATRRWDP 124
Query: 175 STSMTSALVSGRG 137
+ V RG
Sbjct: 123 CIGAGARSVMLRG 85
Score = 105 bits (225), Expect = 6e-022
Identities = 51/127 (40%), Positives = 74/127 (58%)
Frame = -1 / -2
Query: 518 VLTLRKSLGMTHSTFQVFNLHARIG**AMANRKANFSYNVQTMPKQKIIIPMYATSQ*IL 339
VL L +SLG+ + + ++F LHA G A+ RK NF++NVQ M KQ+II+ +YA +Q I
Sbjct: 466 VLALGQSLGVAYDSSEIFGLHAGKGEQAVVYRKLNFTHNVQRMAKQQIIVSVYAAAQGIF 287
Query: 338 KWQYGPISYPVLNSLKCSVEVLTGHSLTIRVRLLCCCFAVRSSTTLVSNLENNTVHLHDV 159
WQ + P L+ LK +E++TG+ L RV C AV +LV N E +VH
Sbjct: 286 HWQDCSVCNPELHGLKSYLELVTGYGLAGRVSFRRGCLAVSPRDSLVGNAEMGSVHWSRG 107
Query: 158 RTCERTR 138
+ C+ R
Sbjct: 106 QICDAQR 86
Score = 85.4 bits (180), Expect(2) = 5e-051
Identities = 51/102 (50%), Positives = 60/102 (58%)
Frame = -2 / -3
Query: 841 VRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASIIKRVTLSLSS*IFSA 662
VRL+ L A LK P PSS T+LVL G SV G+ GSRAS+ VT SS*+ SA
Sbjct: 792 VRLIFLKAKAERTLKRTPVPSSWANTILVLKGRSVLGITGSRASMTNLVTFPTSS*MPSA 613
Query: 661 RTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASLCSI 536
R P AA LA+ VS +AT AAPAVSS ASL ++
Sbjct: 612 RIFMP*ISAARALAMEAVSLRSFAATNSAAPAVSSKASLATL 487
Score = 61.6 bits (128), Expect(2) = 2e-050
Identities = 43/118 (36%), Positives = 55/118 (46%)
Frame = +2 / +1
Query: 149 HKCGRHGGGRYCSQGCLPGLCWSVQRSSSKEGVPEL*DCAL*ALRHCISGCSKLGS**GR 328
H+ G R S CLPG +QR S E +P L L* +R S L
Sbjct: 97 HRSGPCSNARIPSPRCLPGSPGGLQRGSRDESLPFLRAHTL*PVRGSFSSRGALDCRQSS 276
Query: 329 TAT*EFIGR*HT*EL*SFASA*FAHCRRSSPCGSPLLISQSWRED*KPEKCYESSPGS 502
A+ +F+GR HT +L*S AS AHC SS +PL S RE K + ++ P S
Sbjct: 277 PASGKFLGRQHTQKL*SVASPFAAHCG*SSVSCTPLPARPSRREARKSQTSHKPPPSS 450
>gb|CF386507.1|CF386507 RTDR1_14_D12.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_14_D12_A015 5', mRNA
sequence
Length = 741
Score = 199 bits (430), Expect = 3e-050
Identities = 83/147 (56%), Positives = 99/147 (67%)
Frame = +3 / +2
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T + G L+VAYQG P+CE +PC+ F+ AFQAV+ W+A
Sbjct: 200 PLSITDLAPAPMHGSHLRVAYQGVPGAYSEAAATKAYPSCEPIPCDQFEVAFQAVELWIA 379
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
DRAVLP+ENSLGGSIHRNYDLLLRHSLHIVGEV+ V HCLLA PGVK ENL+ +SHPQ
Sbjct: 380 DRAVLPVENSLGGSIHRNYDLLLRHSLHIVGEVQFPVHHCLLALPGVKPENLRRVISHPQ 559
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAA 578
ALAQCE+TLT +G+ D A
Sbjct: 560 ALAQCENTLTLMGLNVAREAFDDTAGA 640
Score = 137 bits (294), Expect(2) = 3e-036
Identities = 71/133 (53%), Positives = 76/133 (57%)
Frame = -2 / -1
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P V V SH ARAWG L+ RFS FTPG A++QW T TSPTMC RS RS*FLCML
Sbjct: 597 PMRVRVFSHWARAWGWLMTRLRFSGFTPGRASRQWCTGN*TSPTMCSEWRSNRS*FLCML 418
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXXXXXXXXAQPW*ATLRTIP 176
PP EFS+G TALSA Q TA* A S SQG SQ G PW*AT R P
Sbjct: 417 PPKEFSTGRTALSAIQSSTA*KATSNWSQGMGSQEG*AFVAAASL*APGTPW*ATRRWDP 238
Query: 175 STSMTSALVSGRG 137
+ V RG
Sbjct: 237 CIGAGARSVMLRG 199
Score = 105 bits (225), Expect = 6e-022
Identities = 51/127 (40%), Positives = 74/127 (58%)
Frame = -1 / -3
Query: 518 VLTLRKSLGMTHSTFQVFNLHARIG**AMANRKANFSYNVQTMPKQKIIIPMYATSQ*IL 339
VL L +SLG+ + + ++F LHA G A+ RK NF++NVQ M KQ+II+ +YA +Q I
Sbjct: 580 VLALGQSLGVAYDSSEIFGLHAGKGEQAVVYRKLNFTHNVQRMAKQQIIVSVYAAAQGIF 401
Query: 338 KWQYGPISYPVLNSLKCSVEVLTGHSLTIRVRLLCCCFAVRSSTTLVSNLENNTVHLHDV 159
WQ + P L+ LK +E++TG+ L RV C AV +LV N E +VH
Sbjct: 400 HWQDCSVCNPELHGLKSYLELVTGYGLAGRVSFRRGCLAVSPRDSLVGNAEMGSVHWSRG 221
Query: 158 RTCERTR 138
+ C+ R
Sbjct: 220 QICDAQR 200
Score = 61.6 bits (128), Expect(2) = 5e-021
Identities = 43/118 (36%), Positives = 55/118 (46%)
Frame = +2 / +1
Query: 149 HKCGRHGGGRYCSQGCLPGLCWSVQRSSSKEGVPEL*DCAL*ALRHCISGCSKLGS**GR 328
H+ G R S CLPG +QR S E +P L L* +R S L
Sbjct: 211 HRSGPCSNARIPSPRCLPGSPGGLQRGSRDESLPFLRAHTL*PVRGSFSSRGALDCRQSS 390
Query: 329 TAT*EFIGR*HT*EL*SFASA*FAHCRRSSPCGSPLLISQSWRED*KPEKCYESSPGS 502
A+ +F+GR HT +L*S AS AHC SS +PL S RE K + ++ P S
Sbjct: 391 PASGKFLGRQHTQKL*SVASPFAAHCG*SSVSCTPLPARPSRREARKSQTSHKPPPSS 564
Score = 60.6 bits (126), Expect(2) = 5e-021
Identities = 25/43 (58%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENI 674
REA DDTAGAA+ VA + L+DT +IAS+ AA++YG+++LA+ I
Sbjct: 611 REAFDDTAGAAEFVAANDLRDTASIASARAAEIYGMNILADGI 739
Score = 35.9 bits (72), Expect(2) = 3e-036
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = -2 / -1
Query: 667 SARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASLCSI 536
SAR P AA LA+ VS +AT AAPAVSS ASL ++
Sbjct: 732 SARIFMP*ISAARALAMEAVSLRSFAATNSAAPAVSSKASLATL 601
>gb|DR686416.1|DR686416 EST1076494 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABF79 3' end, mRNA sequence
Length = 770
Score = 199 bits (430), Expect = 3e-050
Identities = 85/157 (54%), Positives = 100/157 (63%)
Frame = +3 / +3
Query: 186 LKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGGSIH 365
++VAYQG P CE VPC+ F+ AFQAV+ WV D+AVLP+ENSLGGSIH
Sbjct: 285 VRVAYQGVSGAYSEAAALKAYPCCEAVPCKEFEAAFQAVELWVVDKAVLPIENSLGGSIH 464
Query: 366 RNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIEH 545
RNYDLLLRH LHIV EV LAV HCLL PGVK E LK +SHPQAL+QCEHTL++LG+
Sbjct: 465 RNYDLLLRHRLHIVSEVHLAVNHCLLGLPGVKKEELKRVISHPQALSQCEHTLSALGVIR 644
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLD 656
E D A I A ++ G S L+ D
Sbjct: 645 EEVDDTAGAAQFIAANNLRDTGGCCKCSSC*DLWSRD 755
Score = 108 bits (230), Expect = 1e-022
Identities = 65/151 (43%), Positives = 74/151 (49%)
Frame = -2 / -2
Query: 589 ATIFAAPAVSSTASLCSIPSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTS 410
A I A S+ S P +NVCSH RAWG L+ S FTPG +Q TAR TS
Sbjct: 688 AAINWAAPAVSSTSSRITPKALNVCSH*ERAWGWLMTRLSSSFFTPGSPKRQ*LTARCTS 509
Query: 409 PTMCKLCRSKRS*FLCMLPPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXX 230
T+CK R RS* MLPP+EFS G TALS T TA NA S QGT SQ G
Sbjct: 508 LTICKR*RRSRS*LR*MLPPSEFSIGKTALSTTHSSTAWNAASNSLQGTASQHG*AFNAA 329
Query: 229 XXXXXXAQPW*ATLRTIPSTSMTSALVSGRG 137
P *AT + + V+ RG
Sbjct: 328 ASLYAPETP**ATRT*DSQLGIAARSVTDRG 236
>gb|DR742719.1|DR742719 RTCU1_6_C03.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_6_C03_A029 5', mRNA sequence
Length = 711
Score = 199 bits (430), Expect = 3e-050
Identities = 83/147 (56%), Positives = 99/147 (67%)
Frame = +3 / +2
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T + G L+VAYQG P+CE +PC+ F+ AFQAV+ W+A
Sbjct: 71 PLSITDLAPAPMHGSHLRVAYQGVPGAYSEAAATKAYPSCEPIPCDQFEVAFQAVELWIA 250
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
DRAVLP+ENSLGGSIHRNYDLLLRHSLHIVGEV+ V HCLLA PGVK ENL+ +SHPQ
Sbjct: 251 DRAVLPVENSLGGSIHRNYDLLLRHSLHIVGEVQFPVHHCLLALPGVKPENLRRVISHPQ 430
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAA 578
ALAQCE+TLT +G+ D A
Sbjct: 431 ALAQCENTLTLMGLNVAREAFDDTAGA 511
Score = 137 bits (294), Expect(2) = 1e-045
Identities = 71/133 (53%), Positives = 76/133 (57%)
Frame = -2 / -1
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P V V SH ARAWG L+ RFS FTPG A++QW T TSPTMC RS RS*FLCML
Sbjct: 468 PMRVRVFSHWARAWGWLMTRLRFSGFTPGRASRQWCTGN*TSPTMCSEWRSNRS*FLCML 289
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXXXXXXXXAQPW*ATLRTIP 176
PP EFS+G TALSA Q TA* A S SQG SQ G PW*AT R P
Sbjct: 288 PPKEFSTGRTALSAIQSSTA*KATSNWSQGMGSQEG*AFVAAASL*APGTPW*ATRRWDP 109
Query: 175 STSMTSALVSGRG 137
+ V RG
Sbjct: 108 CIGAGARSVMLRG 70
Score = 127 bits (271), Expect(2) = 8e-041
Identities = 52/76 (68%), Positives = 67/76 (88%)
Frame = +3 / +2
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ VA + L+DT +IAS+ AA++YG+++LA+ IQDD NVTRF+MLAREP
Sbjct: 482 REAFDDTAGAAEFVAANDLRDTASIASARAAEIYGMNILADGIQDDVGNVTRFVMLAREP 661
Query: 726 IIPRTDKPFKTSIVFS 773
+IPRTD+PFKTSIVF+
Sbjct: 662 VIPRTDRPFKTSIVFA 709
Score = 105 bits (225), Expect = 6e-022
Identities = 51/127 (40%), Positives = 74/127 (58%)
Frame = -1 / -3
Query: 518 VLTLRKSLGMTHSTFQVFNLHARIG**AMANRKANFSYNVQTMPKQKIIIPMYATSQ*IL 339
VL L +SLG+ + + ++F LHA G A+ RK NF++NVQ M KQ+II+ +YA +Q I
Sbjct: 451 VLALGQSLGVAYDSSEIFGLHAGKGEQAVVYRKLNFTHNVQRMAKQQIIVSVYAAAQGIF 272
Query: 338 KWQYGPISYPVLNSLKCSVEVLTGHSLTIRVRLLCCCFAVRSSTTLVSNLENNTVHLHDV 159
WQ + P L+ LK +E++TG+ L RV C AV +LV N E +VH
Sbjct: 271 HWQDCSVCNPELHGLKSYLELVTGYGLAGRVSFRRGCLAVSPRDSLVGNAEMGSVHWSRG 92
Query: 158 RTCERTR 138
+ C+ R
Sbjct: 91 QICDAQR 71
Score = 67.0 bits (140), Expect(2) = 1e-045
Identities = 40/77 (51%), Positives = 48/77 (62%)
Frame = -2 / -1
Query: 766 TMLVLNGLSVRGMMGSRASIIKRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSA 587
T+LVL G SV G+ GSRAS+ VT SS*+ SAR P AA LA+ VS +A
Sbjct: 702 TILVLKGRSVLGITGSRASMTNLVTFPTSS*MPSARIFMP*ISAARALAMEAVSLRSFAA 523
Query: 586 TIFAAPAVSSTASLCSI 536
T AAPAVSS ASL ++
Sbjct: 522 TNSAAPAVSSKASLATL 472
Score = 61.6 bits (128), Expect(2) = 8e-041
Identities = 43/118 (36%), Positives = 55/118 (46%)
Frame = +2 / +1
Query: 149 HKCGRHGGGRYCSQGCLPGLCWSVQRSSSKEGVPEL*DCAL*ALRHCISGCSKLGS**GR 328
H+ G R S CLPG +QR S E +P L L* +R S L
Sbjct: 82 HRSGPCSNARIPSPRCLPGSPGGLQRGSRDESLPFLRAHTL*PVRGSFSSRGALDCRQSS 261
Query: 329 TAT*EFIGR*HT*EL*SFASA*FAHCRRSSPCGSPLLISQSWRED*KPEKCYESSPGS 502
A+ +F+GR HT +L*S AS AHC SS +PL S RE K + ++ P S
Sbjct: 262 PASGKFLGRQHTQKL*SVASPFAAHCG*SSVSCTPLPARPSRREARKSQTSHKPPPSS 435
>gb|DR161526.1|DR161526 RTFE1_12_G11.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_12_G11_A029 3', mRNA sequence
Length = 727
Score = 141 bits (303), Expect(2) = 4e-050
Identities = 57/82 (69%), Positives = 70/82 (85%)
Frame = +3 / +3
Query: 648 GLDVLAENIQDDKDNVTRFMMLAREPIIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALR 827
G+++LA+ IQDD NVTRF+MLAREP+IPRTD+PFKTSIVF+ EEG G LFK L+ FA R
Sbjct: 3 GMNILADGIQDDVGNVTRFVMLAREPVIPRTDRPFKTSIVFAHEEGTGVLFKVLSAFAFR 182
Query: 828 DINLTKIESRPHKERPLRVSDD 893
+INLTKIESRP + +P+RV DD
Sbjct: 183 NINLTKIESRPQRSKPVRVVDD 248
Score = 78.0 bits (164), Expect(2) = 4e-050
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTDV 1040
F+Y+FYVD EASMA+P+ QNAL ++EF TFLRVLGSYP D+
Sbjct: 276 FEYIFYVDFEASMANPRAQNALAEVQEFTTFLRVLGSYPMDI 401
>gb|CV146614.1|CV146614 EST857823 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDY39 5' end, mRNA sequence
Length = 819
Score = 66.6 bits (139), Expect(6) = 7e-050
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA RDI +TKIESRP +E PLR+
Sbjct: 674 KTTVAFSLKEGTADLCKALSIFAARDIKVTKIESRPLRENPLRM 805
Score = 64.8 bits (135), Expect(6) = 7e-050
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
E V++ A AA+ VAE+ + DT I S++A + YGL+V+ E +QDD N TRF++ ++
Sbjct: 464 EGVNNAASAARFVAENRIDDTAVIGSAIAGQEYGLEVVEEEMQDDSFNTTRFLIFTKK 637
Score = 58.8 bits (122), Expect(6) = 7e-050
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +3 / +2
Query: 282 DTAFQAVQNWVADRAVLPLENSLGGSIHRNYDLLLRH 392
++AF+A+++ ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 194 ESAFEALESDAADRAVVPVENSLDGVIGRNYDLILRH 304
Score = 38.2 bits (77), Expect(6) = 7e-050
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L LG+E
Sbjct: 377 KRRTLKRVISHPQALAHCQRCLGDLGVE 460
Score = 34.5 bits (69), Expect(6) = 7e-050
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPG 455
+L LH+VGE+ L + HCLLA G
Sbjct: 293 ILRHPDLHVVGEILLPINHCLLAVRG 370
Score = 27.2 bits (53), Expect(6) = 7e-050
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +3 / +2
Query: 174 DGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCE 275
+G ++VAYQG C+ +PCE
Sbjct: 83 EGKPVRVAYQGVRGSYCQEAAVRAFQRCDALPCE 184
>gb|CX713730.1|CX713730 RTPQ1_12_B02.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_12_B02_A032 5', mRNA sequence
Length = 515
Score = 198 bits (426), Expect = 1e-049
Identities = 84/154 (54%), Positives = 99/154 (64%)
Frame = +3 / +1
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T M ++VAYQG P CE VPC+ F+ AFQAV+ WV
Sbjct: 19 PLSVTDLAAMPSRESQVRVAYQGVSGAYSEAAALKAYPCCEAVPCKEFEAAFQAVELWVV 198
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
D+AVLP+ENSLGGSIHRNYDLLLRH LHIV EV LAV HCLL PGVK E LK +SHPQ
Sbjct: 199 DKAVLPIENSLGGSIHRNYDLLLRHRLHIVSEVHLAVNHCLLGLPGVKKEELKRVISHPQ 378
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAAKIVAEHM 599
AL+QCEHTL++LG+ E D A I A ++
Sbjct: 379 ALSQCEHTLSALGVIREEVDDTAGAAQFIAANNL 480
Score = 107 bits (229), Expect = 2e-022
Identities = 65/151 (43%), Positives = 74/151 (49%)
Frame = -2 / -1
Query: 589 ATIFAAPAVSSTASLCSIPSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTS 410
A I A S+ S P +NVCSH RAWG L+ S FTPG +Q TAR TS
Sbjct: 470 AAINWAAPAVSSTSSRITPKALNVCSH*ERAWGWLMTRLSSSFFTPGSPKRQ*LTARCTS 291
Query: 409 PTMCKLCRSKRS*FLCMLPPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXX 230
T+CK R RS* MLPP+EFS G TALS T TA NA S QGT SQ G
Sbjct: 290 LTICKR*RRSRS*LR*MLPPSEFSIGKTALSTTHSSTAWNAASNSLQGTASQHG*AFNAA 111
Query: 229 XXXXXXAQPW*ATLRTIPSTSMTSALVSGRG 137
P *AT + + V+ RG
Sbjct: 110 ASLYAPETP**ATRT*DSRLGIAARSVTDRG 18
Score = 87.2 bits (184), Expect(2) = 2e-021
Identities = 41/110 (37%), Positives = 64/110 (58%)
Frame = -1 / -3
Query: 521 CVLTLRKSLGMTHSTFQVFNLHARIG**AMANRKANFSYNVQTMPKQKIIIPMYATSQ*I 342
CVLTLR+SLGM + T ++F LH R A+ N K +F+Y +Q + K+ III + A ++*I
Sbjct: 402 CVLTLRESLGMAYDTLELFLLHTRKSQKAVINCKVHFTYYMQAVTKK*IIITVNAATK*I 223
Query: 341 LKWQYGPISYPVLNSLKCSVEVLTGHSLTIRVRLLCCCFAVRSSTTLVSN 192
Q ++ P N L+C ++ +SLT + CC V S +L+ +
Sbjct: 222 FNRQNSFVNNPQFNCLECRFKLFARNSLTTWISFQCCSLTVCSRNSLIGH 73
Score = 36.3 bits (73), Expect(2) = 2e-021
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -2 / -1
Query: 637 AANELAIAPVSWSICSATIFAAPAVSSTAS 548
AA LA APVS + +A +AAPAVSST+S
Sbjct: 515 AARALATAPVSRRLLAAINWAAPAVSSTSS 426
>gb|DR165613.1|DR165613 RTPHOS1_6_F04.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_6_F04_A029 3', mRNA sequence
Length = 854
Score = 197 bits (425), Expect = 1e-049
Identities = 83/146 (56%), Positives = 95/146 (65%)
Frame = +3 / -3
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P L+ + G L+VAYQG PNCE VPCE F+TAF+AV+ W+
Sbjct: 468 PLSLSDQSLPVSQGSQLRVAYQGVPGAYSEAAAAKAYPNCEAVPCEQFETAFEAVELWLV 289
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
DRAVLP+ENSLGGSIHRNYDLLLRH LHIVGEV+ AV HCLL GVK E L +SHPQ
Sbjct: 288 DRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVQFAVHHCLLGVRGVKREELHRVLSHPQ 109
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGA 575
ALAQCEHTL+ LG+ D A
Sbjct: 108 ALAQCEHTLSKLGVIREAVDDTAGAA 31
Score = 130 bits (278), Expect(2) = 2e-032
Identities = 64/115 (55%), Positives = 69/115 (60%)
Frame = -2 / +2
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P+ NVCSH ARA G L S+FTP NKQ TA TSPT+C LCRS RS* C+L
Sbjct: 71 PNFDNVCSH*ARACGWLRTR*SSSLFTPRTPNKQ*CTANCTSPTICNLCRSSRS*LRCIL 250
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXXXXXXXXAQPW*AT 191
PP+EFS G TALS Q TA AVS CSQGT SQFG PW*AT
Sbjct: 251 PPSEFSIGKTALSTNQSSTASKAVSNCSQGTASQFG*ALAAAASLYAPGTPW*AT 415
Score = 30.4 bits (60), Expect(2) = 2e-032
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 608 VLEHMFCNNLCCTSSVVNSF 549
+ E + N LCCT S++NSF
Sbjct: 1 ITEFV*SNELCCTCSIINSF 60
>gb|DT633406.1|DT633406 EST1148337 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFU57 3' end, mRNA sequence
Length = 777
Score = 197 bits (425), Expect = 1e-049
Identities = 81/138 (58%), Positives = 95/138 (68%)
Frame = +3 / +2
Query: 186 LKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGGSIH 365
++VAYQG P CE VPC+ F+ AFQAV+ WV D+AVLP+ENSLGGSIH
Sbjct: 293 VRVAYQGVSGAYSEAAALKAYPCCEAVPCKEFEAAFQAVELWVVDKAVLPIENSLGGSIH 472
Query: 366 RNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIEH 545
RNYDLLLRH LHIV EV LAV HCLL PGVK E LK +SHPQAL+QCEHTL++LG+
Sbjct: 473 RNYDLLLRHRLHIVSEVHLAVNHCLLGLPGVKKEELKRVISHPQALSQCEHTLSALGVIR 652
Query: 546 REAVDDTAGAAKIVAEHM 599
E D A I A ++
Sbjct: 653 EEVDDTAGAAQFIAANNL 706
Score = 108 bits (230), Expect = 1e-022
Identities = 65/151 (43%), Positives = 74/151 (49%)
Frame = -2 / -1
Query: 589 ATIFAAPAVSSTASLCSIPSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTS 410
A I A S+ S P +NVCSH RAWG L+ S FTPG +Q TAR TS
Sbjct: 696 AAINWAAPAVSSTSSRITPKALNVCSH*ERAWGWLMTRLSSSFFTPGSPKRQ*LTARCTS 517
Query: 409 PTMCKLCRSKRS*FLCMLPPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXX 230
T+CK R RS* MLPP+EFS G TALS T TA NA S QGT SQ G
Sbjct: 516 LTICKR*RRSRS*LR*MLPPSEFSIGKTALSTTHSSTAWNAASNSLQGTASQHG*AFNAA 337
Query: 229 XXXXXXAQPW*ATLRTIPSTSMTSALVSGRG 137
P *AT + + V+ RG
Sbjct: 336 ASLYAPETP**ATRT*DSQLGIAARSVTDRG 244
Score = 87.2 bits (184), Expect(2) = 2e-022
Identities = 41/110 (37%), Positives = 64/110 (58%)
Frame = -1 / -3
Query: 521 CVLTLRKSLGMTHSTFQVFNLHARIG**AMANRKANFSYNVQTMPKQKIIIPMYATSQ*I 342
CVLTLR+SLGM + T ++F LH R A+ N K +F+Y +Q + K+ III + A ++*I
Sbjct: 628 CVLTLRESLGMAYDTLELFLLHTRKSQKAVINCKVHFTYYMQAVTKK*IIITVNAATK*I 449
Query: 341 LKWQYGPISYPVLNSLKCSVEVLTGHSLTIRVRLLCCCFAVRSSTTLVSN 192
Q ++ P N L+C ++ +SLT + CC V S +L+ +
Sbjct: 448 FNRQNSFVNNPQFNCLECRFKLFARNSLTTWISFQCCSLTVCSRNSLIGH 299
Score = 66.6 bits (139), Expect(2) = 1e-022
Identities = 44/117 (37%), Positives = 56/117 (47%)
Frame = +1 / +3
Query: 202 RVVLERTAKXXXXXXTRIVRLCPVSTSTLHFRLFKTG*LIGPYCHLRIHWEVAYIGIMIF 381
R LE T + +VRL + H R G L +C L+IH A+ IMI+
Sbjct: 309 REFLEHTVRLQH*KLIHVVRLFLAKSLKRHSRQLNCGLLTKLFCLLKIHLVAAFTVIMIY 488
Query: 382 CFGIVCTL*EKFALRFAIAY*PILA*RLKT*KVL*VIPRLLRNVSTH*HH*ELSIEK 552
F C * K L+ A+ L *R K+ V * IPRL NVSTH* EL ++K
Sbjct: 489 FFVTACI**VKCTLQLITAFWDFLV*RRKSSSVS*AIPRLSLNVSTH*VLWELYVKK 659
Score = 61.1 bits (127), Expect(2) = 1e-022
Identities = 24/39 (61%), Positives = 34/39 (87%)
Frame = +3 / +2
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVL 662
RE VDDTAGAA+ +A + L+DTGA+AS+ AA++YGL++L
Sbjct: 650 REEVDDTAGAAQFIAANNLRDTGAVASARAAEIYGLEIL 766
Score = 39.6 bits (80), Expect(2) = 2e-022
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 661 RTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTAS 548
R S P AA LA APVS + +A +AAPAVSST+S
Sbjct: 765 RISRP*ISAARALATAPVSRRLLAAINWAAPAVSSTSS 652
>gb|DR015493.1|DR015493 STRS1_3_G09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_3_G09_A034 5', mRNA sequence
Length = 878
Score = 180 bits (388), Expect(2) = 3e-049
Identities = 77/146 (52%), Positives = 92/146 (63%)
Frame = +3 / +1
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P LT G ++VAYQG P CE VPCE F+ AFQAV+ W
Sbjct: 259 PLSLTDLAPSSCHGSQVRVAYQGVPGAYSEVAALKAYPQCEAVPCEQFEAAFQAVELWTV 438
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
DRAVLP+ENSL GSIHRNYDLLL H+LHIVGEV+L V+HCLL GVK E+++ +SHPQ
Sbjct: 439 DRAVLPIENSLVGSIHRNYDLLLSHNLHIVGEVQLPVQHCLLGLSGVKKEDIRRVVSHPQ 618
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGA 575
ALAQCE L+ LG+ D + A
Sbjct: 619 ALAQCEKALSGLGVALENMDDTASAA 696
Score = 109 bits (232), Expect(2) = 2e-026
Identities = 46/75 (61%), Positives = 59/75 (78%)
Frame = +3 / +1
Query: 624 SSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREPIIPRTDKPFKTSIVFSLEEGPGQLFK 803
S L L +D A +DD NVTRF+MLAR+PIIPRTD+PFKTSIVF++++ PG +FK
Sbjct: 646 SGLGVALENMDDTASAAKDDFYNVTRFLMLARDPIIPRTDRPFKTSIVFTVDDRPGAVFK 825
Query: 804 ALAVFALRDINLTKI 848
ALAVFA R+INLT++
Sbjct: 826 ALAVFAFRNINLTQL 870
Score = 95.5 bits (202), Expect(2) = 1e-034
Identities = 53/115 (46%), Positives = 58/115 (50%)
Frame = -2 / -1
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P+ + SH ARAWG L S FTP +Q T TSPT+CKL S +S* ML
Sbjct: 656 PNPLKAFSH*ARAWGWLTTRLISSFFTPESPRRQCWTGSWTSPTICKL*LSSKS*LR*ML 477
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFGXXXXXXXXXXXXAQPW*AT 191
P EFS G TALS Q TA NA S CSQGT S G P *AT
Sbjct: 476 PTREFSMGRTALSTVQSSTAWNAASNCSQGTASHCG*AFKAATSLYAPGTP**AT 312
Score = 76.2 bits (160), Expect(2) = 1e-034
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -2 / -1
Query: 844 FVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASIIKRVTLSLSS 677
+V+L+ L ANTASALK+ PG SS+ TMLVL GLSVRG++GS A+I KRVTL SS
Sbjct: 866 WVKLIFLKANTASALKTAPGLSSTVNTMLVLKGLSVRGIIGSLANIKKRVTL*KSS 699
Score = 36.3 bits (73), Expect(2) = 3e-049
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2 / +3
Query: 692 CHPFYDAXXXXXXXXXXXXI*DKHSLFTRRRTWTAL*GTCCIC 820
C+ D DKH + R+TW GTCCIC
Sbjct: 714 CYSLLDVSQGSNNSTN*QTFQDKHCIHC*RQTWGGFQGTCCIC 842
Score = 31.3 bits (62), Expect(2) = 2e-026
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +1 / +2
Query: 271 VSTSTLHFRLFKTG*LIGPYCHLRIHWEVAYIGIMIFCFGIVCTL*EKFALRFAIAY*PI 450
V++ LH R +G L + RI A+ MI +C K + +IA+
Sbjct: 392 VNSLKLHSRQSNSGQLTEQFFP*RILLLAAFTATMICYLVTICI*WVKSSFLSSIAFLDS 571
Query: 451 LA*RLKT*KVL*VIPRLLRN 510
*R K VL* IPRLL N
Sbjct: 572 PV*RKKILDVL*AIPRLLLN 631
>gb|CV031437.1|CV031437 RTNACL1_1_C09.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_1_C09_A029 5', mRNA sequence
Length = 773
Score = 196 bits (422), Expect = 4e-049
Identities = 82/154 (53%), Positives = 100/154 (64%)
Frame = +3 / +1
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T G ++VAYQG +C+ VPCE F+ AFQAV+ W+
Sbjct: 310 PLSVTDLATPPSHGSQVRVAYQGVPGAYSETAALKAYSHCDAVPCEQFEAAFQAVELWLV 489
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
D+AVLP+ENSLGGSIHRNYDLLLRH LHIVGEV+LAV HCLL PGVK E LK +SHPQ
Sbjct: 490 DKAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKLAVHHCLLGLPGVKKEELKRVVSHPQ 669
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAAKIVAEHM 599
AL+QCEHTL++LG+ D A I A ++
Sbjct: 670 ALSQCEHTLSTLGVIREAVDDTAGAAQFIAANNL 771
Score = 105 bits (223), Expect(2) = 3e-023
Identities = 51/94 (54%), Positives = 57/94 (60%)
Frame = -2 / -1
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P +NVCSH RAWG L S FTPG +Q TA TSPT+C R +S* ML
Sbjct: 707 PRVLNVCSH*ERAWGWLTTRLSSSFFTPGRPKRQ**TASFTSPTICNRWRRSKS*LR*ML 528
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQ 254
PP+EFS G TALS + TA NA S CSQGT SQ
Sbjct: 527 PPSEFSIGKTALSTSHSSTAWNAASNCSQGTASQ 426
Score = 24.4 bits (47), Expect(2) = 3e-023
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 598 ICSATIFAAPAVSSTAS 548
+ +A +AAPAVSSTAS
Sbjct: 767 LLAAINWAAPAVSSTAS 717
>gb|DR069308.1|DR069308 RTDK1_6_H02.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_H02_A029 3', mRNA sequence
Length = 866
Score = 196 bits (422), Expect = 4e-049
Identities = 82/154 (53%), Positives = 100/154 (64%)
Frame = +3 / -3
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T G ++VAYQG +C+ VPCE F+ AFQAV+ W+
Sbjct: 576 PLSVTDLATPPSHGSQVRVAYQGVPGAYSETAALKAYSHCDAVPCEQFEAAFQAVELWLV 397
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
D+AVLP+ENSLGGSIHRNYDLLLRH LHIVGEV+LAV HCLL PGVK E LK +SHPQ
Sbjct: 396 DKAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKLAVHHCLLGLPGVKKEELKRVVSHPQ 217
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAAKIVAEHM 599
AL+QCEHTL++LG+ D A I A ++
Sbjct: 216 ALSQCEHTLSTLGVIREAVDDTAGAAQFIAANNL 115
Score = 107 bits (229), Expect(2) = 6e-034
Identities = 52/94 (55%), Positives = 58/94 (61%)
Frame = -2 / +2
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P +NVCSH RAWG L S FTPG +Q TA TSPT+C R +S*F ML
Sbjct: 179 PRVLNVCSH*ERAWGWLTTRLSSSFFTPGRPKRQ**TASFTSPTICNRWRRSKS*FR*ML 358
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQ 254
PP+EFS G TALS + TA NA S CSQGT SQ
Sbjct: 359 PPSEFSIGKTALSTSHSSTAWNAASNCSQGTASQ 460
Score = 96.4 bits (204), Expect(2) = 9e-032
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = +3 / -3
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLA 716
REAVDDTAGAA+ +A + L+DTGA+AS+ AA++YGL +LA+ IQDD DNVTRF+MLA
Sbjct: 171 REAVDDTAGAAQFIAANNLRDTGAVASARAAEIYGLQILADGIQDDSDNVTRFLMLA 1
Score = 62.0 bits (129), Expect(2) = 9e-032
Identities = 39/109 (35%), Positives = 54/109 (49%)
Frame = +2 / -2
Query: 197 LPGLCWSVQRSSSKEGVPEL*DCAL*ALRHCISGCSKLGS**GRTAT*EFIGR*HT*EL* 376
LPG W +Q S E + L C+L* + I G + * A *+F H+ +L*
Sbjct: 517 LPGSSWGIQ*DCSIESLLTLRCCSL*TI*SRIPGS*TVAC*QSSLAY*KFTWWQHSPKL* 338
Query: 377 SFASA*FAHCRRSSPCGSPLLISQSWRED*KPEKCYESSPGSCAM*AHI 523
+S + R S C S L SW E+ + + C + SPGS +M*AHI
Sbjct: 337 FTSSPPITYSRGSEACSSSLPFGSSWCEEGRAQACCKPSPGSLSM*AHI 191
Score = 57.9 bits (120), Expect(2) = 6e-034
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -2 / +2
Query: 715 ASIIKRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTAS 548
A+I RVTLS SS*I SAR P AA LA APVS + +A +AAPAVSSTAS
Sbjct: 2 ANIKNRVTLSESS*IPSARICRP*ISAARALATAPVSRRLLAAINWAAPAVSSTAS 169
>gb|DR069432.1|DR069432 RTDK1_7_F04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_F04_A029 3', mRNA sequence
Length = 924
Score = 196 bits (422), Expect = 4e-049
Identities = 82/154 (53%), Positives = 100/154 (64%)
Frame = +3 / -3
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T G ++VAYQG +C+ VPCE F+ AFQAV+ W+
Sbjct: 634 PLSVTDLATPPSHGSQVRVAYQGVPGAYSETAALKAYSHCDAVPCEQFEAAFQAVELWLV 455
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
D+AVLP+ENSLGGSIHRNYDLLLRH LHIVGEV+LAV HCLL PGVK E LK +SHPQ
Sbjct: 454 DKAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKLAVHHCLLGLPGVKKEELKRVVSHPQ 275
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAAKIVAEHM 599
AL+QCEHTL++LG+ D A I A ++
Sbjct: 274 ALSQCEHTLSTLGVIREAVDDTAGAAQFIAANNL 173
Score = 135 bits (290), Expect(2) = 2e-043
Identities = 55/76 (72%), Positives = 68/76 (89%)
Frame = +3 / -3
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REAVDDTAGAA+ +A + L+DTGA+AS+ AA++YGL +LA+ IQDD DNVTRF+MLAREP
Sbjct: 229 REAVDDTAGAAQFIAANNLRDTGAVASARAAEIYGLQILADGIQDDSDNVTRFLMLAREP 50
Query: 726 IIPRTDKPFKTSIVFS 773
IIPR D+PFKTSIVF+
Sbjct: 49 IIPRIDRPFKTSIVFT 2
Score = 107 bits (229), Expect(2) = 3e-043
Identities = 52/94 (55%), Positives = 58/94 (61%)
Frame = -2 / +3
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P +NVCSH RAWG L S FTPG +Q TA TSPT+C R +S*F ML
Sbjct: 237 PRVLNVCSH*ERAWGWLTTRLSSSFFTPGRPKRQ**TASFTSPTICNRWRRSKS*FR*ML 416
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQ 254
PP+EFS G TALS + TA NA S CSQGT SQ
Sbjct: 417 PPSEFSIGKTALSTSHSSTAWNAASNCSQGTASQ 518
Score = 89.0 bits (188), Expect(2) = 3e-043
Identities = 48/74 (64%), Positives = 54/74 (72%)
Frame = -2 / +3
Query: 769 KTMLVLNGLSVRGMMGSRASIIKRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICS 590
KTMLVLNGLS+ GM+GS A+I RVTLS SS*I SAR P AA LA APVS + +
Sbjct: 6 KTMLVLNGLSILGMIGSLANIKNRVTLSESS*IPSARICRP*ISAARALATAPVSRRLLA 185
Query: 589 ATIFAAPAVSSTAS 548
A +AAPAVSSTAS
Sbjct: 186 AINWAAPAVSSTAS 227
Score = 62.0 bits (129), Expect(2) = 2e-043
Identities = 39/109 (35%), Positives = 54/109 (49%)
Frame = +2 / -2
Query: 197 LPGLCWSVQRSSSKEGVPEL*DCAL*ALRHCISGCSKLGS**GRTAT*EFIGR*HT*EL* 376
LPG W +Q S E + L C+L* + I G + * A *+F H+ +L*
Sbjct: 575 LPGSSWGIQ*DCSIESLLTLRCCSL*TI*SRIPGS*TVAC*QSSLAY*KFTWWQHSPKL* 396
Query: 377 SFASA*FAHCRRSSPCGSPLLISQSWRED*KPEKCYESSPGSCAM*AHI 523
+S + R S C S L SW E+ + + C + SPGS +M*AHI
Sbjct: 395 FTSSPPITYSRGSEACSSSLPFGSSWCEEGRAQACCKPSPGSLSM*AHI 249
>gb|DR687571.1|DR687571 EST1077653 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABU09 3' end, mRNA sequence
Length = 824
Score = 196 bits (422), Expect = 4e-049
Identities = 82/154 (53%), Positives = 100/154 (64%)
Frame = +3 / +1
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T G ++VAYQG +C+ VPCE F+ AFQAV+ W+
Sbjct: 358 PLSVTDLATPPSHGSQVRVAYQGVPGAYSETAALKAYSHCDAVPCEQFEAAFQAVELWLV 537
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
D+AVLP+ENSLGGSIHRNYDLLLRH LHIVGEV+LAV HCLL PGVK E LK +SHPQ
Sbjct: 538 DKAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKLAVHHCLLGLPGVKKEELKRVVSHPQ 717
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAAKIVAEHM 599
AL+QCEHTL++LG+ D A I A ++
Sbjct: 718 ALSQCEHTLSTLGVIREAVDDTAGAAQFIAANNL 819
Score = 105 bits (223), Expect(2) = 3e-023
Identities = 51/94 (54%), Positives = 57/94 (60%)
Frame = -2 / -1
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P +NVCSH RAWG L S FTPG +Q TA TSPT+C R +S* ML
Sbjct: 755 PRVLNVCSH*ERAWGWLTTRLSSSFFTPGRPKRQ**TASFTSPTICNRWRRSKS*LR*ML 576
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQ 254
PP+EFS G TALS + TA NA S CSQGT SQ
Sbjct: 575 PPSEFSIGKTALSTSHSSTAWNAASNCSQGTASQ 474
Score = 24.4 bits (47), Expect(2) = 3e-023
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 598 ICSATIFAAPAVSSTAS 548
+ +A +AAPAVSSTAS
Sbjct: 815 LLAAINWAAPAVSSTAS 765
>gb|DR688335.1|DR688335 EST1078419 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC508 3' end, mRNA sequence
Length = 827
Score = 193 bits (416), Expect = 3e-048
Identities = 81/154 (52%), Positives = 99/154 (64%)
Frame = +3 / +3
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T G ++VAYQG +C+ VPCE F+ AFQAV+ W+
Sbjct: 360 PLSVTDLATPPSHGSQVRVAYQGVPGAYSETAALKAYSHCDAVPCEQFEAAFQAVELWLV 539
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQ 497
D+AV P+ENSLGGSIHRNYDLLLRH LHIVGEV+LAV HCLL PGVK E LK +SHPQ
Sbjct: 540 DKAVSPIENSLGGSIHRNYDLLLRHRLHIVGEVKLAVHHCLLGLPGVKKEELKRVVSHPQ 719
Query: 498 ALAQCEHTLTSLGIEHREAVDDTAGAAKIVAEHM 599
AL+QCEHTL++LG+ D A I A ++
Sbjct: 720 ALSQCEHTLSTLGVIREAVDDTAGAAQFIAANNL 821
Score = 105 bits (223), Expect(2) = 3e-023
Identities = 51/94 (54%), Positives = 57/94 (60%)
Frame = -2 / -2
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P +NVCSH RAWG L S FTPG +Q TA TSPT+C R +S* ML
Sbjct: 757 PRVLNVCSH*ERAWGWLTTRLSSSFFTPGRPKRQ**TASFTSPTICNRWRRSKS*LR*ML 578
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQ 254
PP+EFS G TALS + TA NA S CSQGT SQ
Sbjct: 577 PPSEFSIGETALSTSHSSTAWNAASNCSQGTASQ 476
Score = 24.4 bits (47), Expect(2) = 3e-023
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 598 ICSATIFAAPAVSSTAS 548
+ +A +AAPAVSSTAS
Sbjct: 817 LLAAINWAAPAVSSTAS 767
>gb|CN784949.1|CN784949 EST783640 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAS63 5' end, mRNA sequence
Length = 907
Score = 142 bits (304), Expect(2) = 5e-048
Identities = 58/119 (48%), Positives = 77/119 (64%)
Frame = +3 / +2
Query: 186 LKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGGSIH 365
++VAYQG P CE VPC+ ++ A AV++ ADRA+LP+E +L G+
Sbjct: 392 VRVAYQGIPGAFSEAAATTAHPGCEGVPCKGYEDAIWAVESRKADRAILPVEGTLEGNAV 571
Query: 366 RNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIE 542
RNYDLLL HSL+IV E+RL V +CLL PGV+ E ++ MSHP ALA C H L LG++
Sbjct: 572 RNYDLLLHHSLYIVEEIRLFVNYCLLVAPGVRKEQVRRVMSHPMALAHCSHGLKKLGLD 748
Score = 70.7 bits (148), Expect(2) = 5e-048
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = +3 / +2
Query: 531 LGIEHREAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNV 695
L + REAVDDTAGAA+ V L+DT AIAS AA++YGLDV+A ++QD+ NV
Sbjct: 743 LDVVTREAVDDTAGAAEFVHSRGLRDTAAIASCRAAEIYGLDVVAPHVQDEPWNV 907
>gb|CV145041.1|CV145041 EST856250 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDD54 5' end, mRNA sequence
Length = 907
Score = 66.6 bits (139), Expect(6) = 1e-047
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA RDI +TKIESRP +E PLR+
Sbjct: 452 KTTVAFSLKEGTADLCKALSIFAARDIKVTKIESRPLRENPLRM 583
Score = 64.8 bits (135), Expect(6) = 1e-047
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
E V++ A AA+ VAE+ + DT I S++A + YGL+V+ E +QDD N TRF++ ++
Sbjct: 242 EGVNNAASAARFVAENRIDDTAVIGSAIAGQEYGLEVVEEEMQDDSFNTTRFLIFTKK 415
Score = 50.1 bits (103), Expect(6) = 1e-047
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3 / +2
Query: 315 ADRAVLPLENSLGGSIHRNYDLLLRH 392
ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 5 ADRAVVPVENSLDGVIGRNYDLILRH 82
Score = 38.2 bits (77), Expect(6) = 1e-047
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L LG+E
Sbjct: 155 KRRTLKRVISHPQALAHCQRCLGDLGVE 238
Score = 34.5 bits (69), Expect(6) = 1e-047
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPG 455
+L LH+VGE+ L + HCLLA G
Sbjct: 71 ILRHPDLHVVGEILLPINHCLLAVRG 148
Score = 28.1 bits (55), Expect(6) = 1e-047
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 915 FDYLFYVDLEASMAD 959
F Y+F+VDLEA +AD
Sbjct: 626 FKYVFFVDLEAPVAD 670
>gb|CV144853.1|CV144853 EST856062 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDB09 5' end, mRNA sequence
Length = 902
Score = 66.6 bits (139), Expect(6) = 1e-047
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA RDI +TKIESRP +E PLR+
Sbjct: 452 KTTVAFSLKEGTADLCKALSIFAARDIKVTKIESRPLRENPLRM 583
Score = 64.8 bits (135), Expect(6) = 1e-047
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
E V++ A AA+ VAE+ + DT I S++A + YGL+V+ E +QDD N TRF++ ++
Sbjct: 242 EGVNNAASAARFVAENRIDDTAVIGSAIAGQEYGLEVVEEEMQDDSFNTTRFLIFTKK 415
Score = 50.1 bits (103), Expect(6) = 1e-047
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3 / +2
Query: 315 ADRAVLPLENSLGGSIHRNYDLLLRH 392
ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 5 ADRAVVPVENSLDGVIGRNYDLILRH 82
Score = 38.2 bits (77), Expect(6) = 1e-047
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L LG+E
Sbjct: 155 KRRTLKRVISHPQALAHCQRCLGDLGVE 238
Score = 34.5 bits (69), Expect(6) = 1e-047
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPG 455
+L LH+VGE+ L + HCLLA G
Sbjct: 71 ILRHPDLHVVGEILLPINHCLLAVRG 148
Score = 28.1 bits (55), Expect(6) = 1e-047
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 915 FDYLFYVDLEASMAD 959
F Y+F+VDLEA +AD
Sbjct: 626 FKYVFFVDLEAPVAD 670
>gb|DT624591.1|DT624591 EST1158926 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAG93 5' end, mRNA sequence
Length = 766
Score = 66.6 bits (139), Expect(6) = 1e-047
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA RDI +TKIESRP +E PLR+
Sbjct: 452 KTTVAFSLKEGTADLCKALSIFAARDIKVTKIESRPLRENPLRM 583
Score = 64.8 bits (135), Expect(6) = 1e-047
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
E V++ A AA+ VAE+ + DT I S++A + YGL+V+ E +QDD N TRF++ ++
Sbjct: 242 EGVNNAASAARFVAENRIDDTAVIGSAIAGQEYGLEVVEEEMQDDSFNTTRFLIFTKK 415
Score = 50.1 bits (103), Expect(6) = 1e-047
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3 / +2
Query: 315 ADRAVLPLENSLGGSIHRNYDLLLRH 392
ADRAV+P+ENSL G I RNYDL+LRH
Sbjct: 5 ADRAVVPVENSLDGVIGRNYDLILRH 82
Score = 38.2 bits (77), Expect(6) = 1e-047
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L LG+E
Sbjct: 155 KRRTLKRVISHPQALAHCQRCLGDLGVE 238
Score = 34.5 bits (69), Expect(6) = 1e-047
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPG 455
+L LH+VGE+ L + HCLLA G
Sbjct: 71 ILRHPDLHVVGEILLPINHCLLAVRG 148
Score = 28.1 bits (55), Expect(6) = 1e-047
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 915 FDYLFYVDLEASMAD 959
F Y+F+VDLEA +AD
Sbjct: 626 FKYVFFVDLEAPVAD 670
>gb|CR393509.1|CR393509 CR393509 RN Pinus pinaster cDNA clone RN61B03, mRNA sequence
Length = 540
Score = 186 bits (401), Expect = 3e-046
Identities = 74/110 (67%), Positives = 87/110 (79%)
Frame = +3 / +2
Query: 249 PNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAV 428
P+CE +PC+ F+ AFQAV+ W+ADRAVLP+ENSLGGSIHRNYDLLLRHSLHIVGEV+ V
Sbjct: 56 PSCEPIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHSLHIVGEVQFPV 235
Query: 429 RHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIEHREAVDDTAGAA 578
HCLLA PGVK ENL+ +SHPQALAQCE+TLT +G+ D A
Sbjct: 236 HHCLLALPGVKPENLRRVISHPQALAQCENTLTLMGLNVAREAFDDTAGA 385
Score = 127 bits (273), Expect(2) = 2e-038
Identities = 61/96 (63%), Positives = 65/96 (67%)
Frame = -2 / -1
Query: 535 PSDVNVCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCML 356
P V V SH ARAWG L+ RFS FTPG A++QW T TSPTMC RS RS*FLCML
Sbjct: 342 PMRVRVFSHWARAWGWLMTRLRFSGFTPGRASRQWCTGN*TSPTMCSEWRSNRS*FLCML 163
Query: 355 PPNEFSSGSTALSATQF*TA*NAVSKCSQGTVSQFG 248
PP EFS+G TALSA Q TA* A S SQG SQ G
Sbjct: 162 PPKEFSTGRTALSAIQSSTA*KATSNWSQGMGSQEG 55
Score = 93.2 bits (197), Expect(2) = 9e-027
Identities = 38/61 (62%), Positives = 52/61 (85%)
Frame = +3 / +2
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREP 725
REA DDTAGAA+ VA + L++T +IAS+ AA++YG+++LA+ IQDD NVTRF+MLAREP
Sbjct: 356 REAFDDTAGAAEFVAANNLRETASIASARAAEIYGMNILADGIQDDVGNVTRFVMLAREP 535
Query: 726 I 728
+
Sbjct: 536 V 538
Score = 52.8 bits (109), Expect(2) = 2e-038
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = -2 / -1
Query: 724 GSRASIIKRVTLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTASL 545
GSRAS+ VT SS*+ SAR P AA LA+ VS + +AT AAPAVSS ASL
Sbjct: 534 GSRASMTNLVTFPTSS*MPSARIFMP*ISAARALAMDAVSLRLFAATNSAAPAVSSKASL 355
Query: 544 CSI 536
++
Sbjct: 354 ATL 346
Score = 48.3 bits (99), Expect(2) = 9e-027
Identities = 36/94 (38%), Positives = 46/94 (48%)
Frame = +2 / +1
Query: 221 QRSSSKEGVPEL*DCAL*ALRHCISGCSKLGS**GRTAT*EFIGR*HT*EL*SFASA*FA 400
QR S E +P L L* +R S L A+ +F+GR HT +L*S AS A
Sbjct: 28 QRGSRDESLPFLRAHTL*PVRGSFSSRGALDCRQSSPASGKFLGRQHTQKL*SVASPFAA 207
Query: 401 HCRRSSPCGSPLLISQSWRED*KPEKCYESSPGS 502
HC SS +PL S RE K + ++ SP S
Sbjct: 208 HCG*SSVPCTPLPARPSRREARKSQTSHKPSPSS 309
>gb|BF517836.1|BF517836 NXSI_027_G07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_027_G07 5' similar to Arabidopsis thaliana
sequence At1g08250 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 465
Score = 175 bits (376), Expect(2) = 3e-045
Identities = 73/118 (61%), Positives = 93/118 (78%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAREPI 728
E +DDTA AAK +A +DTGA+AS+ AA++YGLD+L IQDD NVTRF+MLAR+PI
Sbjct: 59 ENMDDTASAAKFIATSNYRDTGAVASARAAEIYGLDILLNGIQDDFYNVTRFLMLARDPI 238
Query: 729 IPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRVSDDCSS 902
IPRTD+PFKTSIVF++++ PG +F LAVFA R+INLTKIE P ++RPL + DD S
Sbjct: 239 IPRTDRPFKTSIVFTVDDRPGAVFXXLAVFAFRNINLTKIEXXPQRKRPLXMVDDXXS 412
Score = 100 bits (214), Expect(2) = 1e-021
Identities = 60/109 (55%), Positives = 68/109 (62%)
Frame = -2 / -1
Query: 874 GLSLCGRLSIFVRLMSLSANTASALKSCPGPSSSEKTMLVLNGLSVRGMMGSRASIIKRV 695
G L G SI V+L+ L ANTAS K+ PG SS+ TMLVL GLSVRG++GS A+I KRV
Sbjct: 384 GRFLWGXXSILVKLIFLKANTASXXKTAPGLSSTVNTMLVLKGLSVRGIIGSLANIKKRV 205
Query: 694 TLSLSS*IFSARTSNPYSLAANELAIAPVSWSICSATIFAAPAVSSTAS 548
TL SS I R S P AA LA APVS + A AA AVSS S
Sbjct: 204 TL*KSSWIPFKRISRP*ISAARALATAPVSL*LLVAINLAALAVSSIFS 58
Score = 28.6 bits (56), Expect(2) = 3e-045
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / +2
Query: 882 VSDDCSSLLKNFDYLFYVDLEAS 950
V D S K FDYL VD EAS
Sbjct: 395 VDDXXSGTAKYFDYLXXVDFEAS 463
Score = 23.5 bits (45), Expect(2) = 1e-021
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 535 PSDVNVCSHCARAWG* 488
P+ + SH ARAWG*
Sbjct: 48 PNPLKAFSH*ARAWG* 1
>gb|BG318319.1|BG318319 NXPV_012_C02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_012_C02 5' similar to Arabidopsis
thaliana sequence At1g08250 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 416
Score = 168 bits (362), Expect(2) = 3e-045
Identities = 65/95 (68%), Positives = 76/95 (80%)
Frame = +3 / +3
Query: 249 PNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGGSIHRNYDLLLRHSLHIVGEVRLAV 428
P CE +PC+ F+ AFQAV+ WVADRAVLP+ENSLGGSIHRNYDLLLRH LHIVGEV+L V
Sbjct: 24 PGCEPIPCDQFEAAFQAVELWVADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPV 203
Query: 429 RHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSL 533
HCLL PG E+++ SHP LAQCEHT++ L
Sbjct: 204 HHCLLTLPGTXNEDVRRVXSHPXXLAQCEHTISKL 308
Score = 94.1 bits (199), Expect(2) = 2e-021
Identities = 50/91 (54%), Positives = 54/91 (59%)
Frame = -2 / -2
Query: 520 VCSHCARAWG*LIALFRFSIFTPGLANKQWRTARRTSPTMCKLCRSKRS*FLCMLPPNEF 341
VCSH AR G LI S PG N+QW T TSPT+ R RS* MLPP+EF
Sbjct: 295 VCSHWARXCGWLITRRTSSXXVPGSVNRQWCTGSCTSPTI*SRWRRSRS*LRWMLPPSEF 116
Query: 340 SSGSTALSATQF*TA*NAVSKCSQGTVSQFG 248
S+GSTA SATQ TA*NA S S G SQ G
Sbjct: 115 STGSTARSATQSSTA*NAASNWSHGMGSQPG 23
Score = 35.0 bits (70), Expect(2) = 3e-045
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3 / +3
Query: 546 REAVDDTAGAAKIVAEHMLQDTGAIASSLA 635
R+ VDDTAGA ++VA + L+ +IASS A
Sbjct: 327 RDGVDDTAGAPQMVAANYLRXXVSIASSRA 416
Score = 29.5 bits (58), Expect(2) = 2e-021
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -2
Query: 634 ANELAIAPVSWSICSATIFAAPAVSSTAS 548
A ELAI +ATI+ APAVSST S
Sbjct: 415 ARELAIETXXRR*FAATIWGAPAVSSTPS 329
>gb|DT624337.1|DT624337 EST1158612 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD54 5' end, mRNA sequence
Length = 829
Score = 72.1 bits (151), Expect(6) = 3e-045
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
EAVD+ A AA+ VAE+ + DT I S +A + YGL+V+ E +QDD N TRF++L ++
Sbjct: 209 EAVDNAASAARFVAENRIDDTAVIGSEIAGREYGLEVVEEEMQDDSSNATRFLILTKK 382
Score = 68.9 bits (144), Expect(6) = 3e-045
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA+RDI +TKIESRP +E PLR+
Sbjct: 419 KTTVAFSLKEGTADLCKALSIFAVRDIKVTKIESRPQRENPLRM 550
Score = 38.6 bits (78), Expect(6) = 3e-045
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L +LG+E
Sbjct: 122 KRRTLKRVISHPQALAHCQRCLGALGVE 205
Score = 35.4 bits (71), Expect(6) = 3e-045
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPGVK 461
+L LH+VGEV L + HCLLA G +
Sbjct: 38 MLRHPDLHVVGEVLLRINHCLLAVRGAE 121
Score = 30.4 bits (60), Expect(6) = 3e-045
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 345 SLGGSIHRNYDLLLRH 392
SL G I RNYDL+LRH
Sbjct: 2 SLDGVIGRNYDLMLRH 49
Score = 28.6 bits (56), Expect(6) = 3e-045
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 915 FDYLFYVDLEASMAD 959
F+Y+F+VDLEA AD
Sbjct: 593 FEYVFFVDLEAPAAD 637
>gb|CV138999.1|CV138999 EST850208 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB982 5' end, mRNA sequence
Length = 826
Score = 72.1 bits (151), Expect(6) = 3e-045
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLARE 722
EAVD+ A AA+ VAE+ + DT I S +A + YGL+V+ E +QDD N TRF++L ++
Sbjct: 209 EAVDNAASAARFVAENRIDDTAVIGSEIAGREYGLEVVEEEMQDDSSNATRFLILTKK 382
Score = 68.9 bits (144), Expect(6) = 3e-045
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL+EG L KAL++FA+RDI +TKIESRP +E PLR+
Sbjct: 419 KTTVAFSLKEGTADLCKALSIFAVRDIKVTKIESRPQRENPLRM 550
Score = 38.6 bits (78), Expect(6) = 3e-045
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA C+ L +LG+E
Sbjct: 122 KRRTLKRVISHPQALAHCQRCLGALGVE 205
Score = 35.4 bits (71), Expect(6) = 3e-045
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 378 LLLRHSLHIVGEVRLAVRHCLLANPGVK 461
+L LH+VGEV L + HCLLA G +
Sbjct: 38 MLRHPDLHVVGEVLLRINHCLLAVRGAE 121
Score = 30.4 bits (60), Expect(6) = 3e-045
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 345 SLGGSIHRNYDLLLRH 392
SL G I RNYDL+LRH
Sbjct: 2 SLDGVIGRNYDLMLRH 49
Score = 28.6 bits (56), Expect(6) = 3e-045
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 915 FDYLFYVDLEASMAD 959
F+Y+F+VDLEA AD
Sbjct: 593 FEYVFFVDLEAPAAD 637
>gb|DT627344.1|DT627344 EST1160420 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAX59 5' end, mRNA sequence
Length = 879
Score = 142 bits (304), Expect(2) = 3e-045
Identities = 58/119 (48%), Positives = 77/119 (64%)
Frame = +3 / +2
Query: 186 LKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVADRAVLPLENSLGGSIH 365
++VAYQG P CE VPC+ ++ A AV++ ADRA+LP+E +L G+
Sbjct: 392 VRVAYQGIPGAFSEAAATTAHPGCEGVPCKGYEDAIWAVESRKADRAILPVEGTLEGNAV 571
Query: 366 RNYDLLLRHSLHIVGEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIE 542
RNYDLLL HSL+IV E+RL V +CLL PGV+ E ++ MSHP ALA C H L LG++
Sbjct: 572 RNYDLLLHHSLYIVEEIRLFVNYCLLVAPGVRKEQVRRVMSHPMALAHCSHGLKKLGLD 748
Score = 61.1 bits (127), Expect(2) = 3e-045
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +3 / +2
Query: 531 LGIEHREAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLA 665
L + REAVDDTAGAA+ V L+DT AIAS AA++YGLDV+A
Sbjct: 743 LDVVTREAVDDTAGAAEFVHSRGLRDTAAIASCRAAEIYGLDVVA 877
>gb|DR686925.1|DR686925 EST1077003 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABL37 3' end, mRNA sequence
Length = 723
Score = 117 bits (251), Expect(2) = 2e-044
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +3 / +2
Query: 138 PRPLTSADVMEVDGIVLKVAYQGCXXXXXXXXXXXXXPNCETVPCEHFDTAFQAVQNWVA 317
P +T G ++VAYQG +C+ VPCE F+ AFQAV+ W+
Sbjct: 269 PLSVTDLATPPSHGSQVRVAYQGVPGAYSETAALKAYSHCDAVPCEQFEAAFQAVELWLV 448
Query: 318 DRAVLPLENSLGGSIHRNYDLLLRHSLHIVG 410
D+AVLP+ENSLGGSIHRNYDLLLRH LHIVG
Sbjct: 449 DKAVLPIENSLGGSIHRNYDLLLRHRLHIVG 541
Score = 82.6 bits (174), Expect(2) = 2e-044
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +3 / +3
Query: 408 GEVRLAVRHCLLANPGVKIENLKSAMSHPQALAQCEHTLTSLGIEHREAVDDTAGAAKIV 587
GEV+LAV HCLL PGVK E LK +SHPQAL+QCEHTL++LG+ D A I
Sbjct: 540 GEVKLAVHHCLLGLPGVKKEELKRVVSHPQALSQCEHTLSTLGVIREAVDDTAGAAQFIA 719
Query: 588 A 590
A
Sbjct: 720 A 722
>gb|CF400592.1|CF400592 RTWW1_6_A02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_A02_A015 5', mRNA sequence
Length = 668
Score = 73.5 bits (154), Expect(6) = 6e-044
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3 / +3
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAR 719
EAVD+ A AA+ VAE+ + DT I S +A + YGL+V+ E IQDD N TRF++L++
Sbjct: 204 EAVDNAASAARFVAENRIDDTAVIGSKIAGREYGLEVVEEEIQDDSSNTTRFLILSK 374
Score = 69.8 bits (146), Expect(6) = 6e-044
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +3 / +3
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ FSL++G LFKAL++FA+RDI +TKIESRP +E PLR+
Sbjct: 417 KTTVAFSLKQGTADLFKALSIFAVRDIKVTKIESRPLRENPLRL 548
Score = 40.5 bits (82), Expect(6) = 6e-044
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3 / +3
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K LK +SHPQALA CE L +LG+E
Sbjct: 117 KRRELKRVISHPQALAHCERRLVALGLE 200
Score = 29.5 bits (58), Expect(6) = 6e-044
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 378 LLLRHSLHIVGEVRLAVRHCLLA 446
+L L +VGE+ L + HCLLA
Sbjct: 33 MLRHPDLRVVGELLLPINHCLLA 101
Score = 28.1 bits (55), Expect(6) = 6e-044
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3 / +3
Query: 915 FDYLFYVDLEASMADPKT 968
F+Y+F+VDLE ++D +T
Sbjct: 585 FEYVFFVDLELPVSDDQT 638
Score = 28.1 bits (55), Expect(6) = 6e-044
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 354 GSIHRNYDLLLRH 392
G I RNYDL+LRH
Sbjct: 6 GVIERNYDLMLRH 44
>gb|CF667048.1|CF667048 RTCNT1_27_H03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_H03_A029 5', mRNA sequence
Length = 818
Score = 74.8 bits (157), Expect(5) = 1e-043
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +3 / +3
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAR 719
EAVD+ A AA+ VAE+ + DT I S +AA+ YGL+V+ E IQDD N TRF++L +
Sbjct: 156 EAVDNAASAARFVAENSIDDTAVIGSQIAAREYGLEVVEEEIQDDSSNTTRFLILGK 326
Score = 73.5 bits (154), Expect(5) = 1e-043
Identities = 27/44 (61%), Positives = 39/44 (88%)
Frame = +3 / +3
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ F+L+EG G LFKAL++FA+RDI +TKIESRP +++PLR+
Sbjct: 369 KTTVAFALKEGTGDLFKALSIFAVRDITVTKIESRPQRQKPLRM 500
Score = 43.2 bits (88), Expect(5) = 1e-043
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3 / +3
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K +LK+ +SHPQALA C+ LT+LG+E
Sbjct: 69 KRRSLKTVVSHPQALAHCQQRLTALGVE 152
Score = 33.1 bits (66), Expect(5) = 1e-043
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3 / +3
Query: 396 LHIVGEVRLAVRHCLLANPGV 458
LH+VGE+ L + HCLLA G+
Sbjct: 3 LHVVGELLLPINHCLLAVRGM 65
Score = 27.2 bits (53), Expect(5) = 1e-043
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3 / +3
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKE 995
F+Y+F+VDLEA D + L++
Sbjct: 543 FEYVFFVDLEAPATDDNPDSLQRGLEQ 623
>gb|CF476367.1|CF476367 RTWW2_22_D03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_22_D03_A021 5', mRNA sequence
Length = 629
Score = 73.0 bits (153), Expect(5) = 2e-042
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +3 / +2
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAR 719
EAVD+ A AA+ V E+ + DT I S +AA+ YGL+V+ E IQDD N TRF++L +
Sbjct: 161 EAVDNAASAARFVVENSIDDTAVIGSQIAAREYGLEVVEEQIQDDSSNTTRFLILGK 331
Score = 70.7 bits (148), Expect(5) = 2e-042
Identities = 26/44 (59%), Positives = 38/44 (86%)
Frame = +3 / +2
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ F+L+EG LFKAL++FA+RDI +TKIESRP +++PLR+
Sbjct: 374 KTTVAFALKEGTADLFKALSIFAVRDITVTKIESRPQRQKPLRM 505
Score = 43.2 bits (88), Expect(5) = 2e-042
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3 / +2
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K +LK+ +SHPQALA C+ LT+LG+E
Sbjct: 74 KRRSLKTVVSHPQALAHCQQRLTALGVE 157
Score = 33.1 bits (66), Expect(5) = 2e-042
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 396 LHIVGEVRLAVRHCLLANPGV 458
LH+VGE+ L + HCLLA G+
Sbjct: 8 LHVVGELLLPINHCLLAVRGM 70
Score = 27.2 bits (53), Expect(5) = 2e-042
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3 / +2
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKE 995
F+Y+F+VDLEA D + L++
Sbjct: 548 FEYVFFVDLEAPATDDNPDSLQRGLEQ 628
>gb|CX647752.1|CX647752 COLD1_19_G12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_19_G12_A029 5', mRNA sequence
Length = 645
Score = 108 bits (230), Expect(2) = 3e-042
Identities = 43/60 (71%), Positives = 55/60 (91%)
Frame = +3 / +1
Query: 669 NIQDDKDNVTRFMMLAREPIIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRDINLTKI 848
++QDD NVTRF+MLAR+PIIPRTD+PFKTSIVF++++ PG +FKALAVFA R+INLTK+
Sbjct: 97 SVQDDFYNVTRFLMLARDPIIPRTDRPFKTSIVFTVDDRPGAVFKALAVFAFRNINLTKL 276
Score = 85.4 bits (180), Expect(2) = 3e-042
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = +3 / +2
Query: 882 VSDDCSSLLKNFDYLFYVDLEASMADPKTQNALGNLKEFATFLRVLGSYPTD 1037
V D S K FDYLFYVD EASMAD + QNAL +L+EFATFLRVLGSYP D
Sbjct: 380 VDDRNSGTAKYFDYLFYVDFEASMADLRAQNALSHLQEFATFLRVLGSYPID 535
>gb|CF402802.1|CF402802 RTWW1_22_A03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_A03_A015 5', mRNA sequence
Length = 809
Score = 74.8 bits (157), Expect(5) = 4e-042
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +3 / +1
Query: 549 EAVDDTAGAAKIVAEHMLQDTGAIASSLAAKLYGLDVLAENIQDDKDNVTRFMMLAR 719
EAVD+ A AA+ VAE+ + DT I S +AA+ YGL+V+ E IQDD N TRF++L +
Sbjct: 148 EAVDNAASAARFVAENSIDDTAVIGSQIAAREYGLEVVEEEIQDDSSNTTRFLILGK 318
Score = 73.5 bits (154), Expect(5) = 4e-042
Identities = 27/44 (61%), Positives = 39/44 (88%)
Frame = +3 / +1
Query: 753 KTSIVFSLEEGPGQLFKALAVFALRDINLTKIESRPHKERPLRV 884
KT++ F+L+EG G LFKAL++FA+RDI +TKIESRP +++PLR+
Sbjct: 361 KTTVAFALKEGTGDLFKALSIFAVRDITVTKIESRPQRQKPLRM 492
Score = 43.2 bits (88), Expect(5) = 4e-042
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 459 KIENLKSAMSHPQALAQCEHTLTSLGIE 542
K +LK+ +SHPQALA C+ LT+LG+E
Sbjct: 61 KRRSLKTVVSHPQALAHCQQRLTALGVE 144
Score = 27.6 bits (54), Expect(5) = 4e-042
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 402 IVGEVRLAVRHCLLANPGV 458
+VGE+ L + HCLLA G+
Sbjct: 1 VVGELLLLINHCLLAVRGM 57
Score = 27.2 bits (53), Expect(5) = 4e-042
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 915 FDYLFYVDLEASMADPKTQNALGNLKE 995
F+Y+F+VDLEA D + L++
Sbjct: 535 FEYVFFVDLEAPATDDNPDSLQRGLEQ 615
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 721,910,882
Number of Sequences: 355925
Number of extensions: 10652818
Number of successful extensions: 71146
Number of sequences better than 1.0e-020: 100
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 22665668670
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)