TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2950160.2.1
         (846 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DR112556.1|DR112556  RTS1_29_B07.b1_A029 Roots minus sulf...    89   9e-049
gb|CO364079.1|CO364079  RTK1_13_C05.g1_A029 Roots minus pota...    93   1e-048
gb|DR078574.1|DR078574  RTFEPL1_5_C09.g1_A029 Roots plus add...    93   4e-042
gb|CF396558.1|CF396558  RTDS2_22_C09.g1_A021 Drought-stresse...    80   1e-041
gb|DR686620.1|DR686620  EST1076698 Normalized pine embryo li...    71   7e-036
gb|AW289781.1|AW289781  NXNV006B06F Nsf Xylem Normal wood Ve...    66   2e-035
gb|CD028366.1|CD028366  NXNV006B06 Nsf Xylem Normal wood Ver...    66   2e-035
gb|DR014696.1|DR014696  HEAT1_51_C03.b1_A029 Root at 37 C fo...    71   5e-033
gb|DR689244.1|DR689244  EST1079330 Normalized pine embryo li...    71   5e-033
gb|DR109571.1|DR109571  RTS1_3_E05.b1_A029 Roots minus sulfu...    71   5e-033
gb|DT635347.1|DT635347  EST1150278 Normalized pine embryo li...    71   5e-033
gb|DR169090.1|DR169090  RTPHOS1_30_A06.b1_A029 Roots minus p...    71   5e-033
gb|CX713265.1|CX713265  RTPQ1_8_B07.b1_A032 Roots treated wi...    71   5e-033
gb|CX651405.1|CX651405  COLD1_52_D12.b1_A029 Root cold Pinus...    64   8e-032
gb|BX249940.1|BX249940  BX249940 Pinus pinaster differenciat...    72   1e-026
gb|BQ107024.1|BQ107024  NXLV085_F11_F NXLV (Nsf Xylem Late w...    76   2e-026
gb|BI202957.1|BI202957  NXPV_093_C03_F NXPV (Nsf Xylem Plani...    64   1e-025
gb|DR744023.1|DR744023  RTCU1_19_F03.g1_A029 Roots plus adde...    64   3e-024
gb|DR015777.1|DR015777  STRS1_5_C07.g1_A034 Shoot tip pitch ...    67   1e-023
gb|DR015694.1|DR015694  STRS1_5_C07.b1_A034 Shoot tip pitch ...    69   1e-022
gb|BX250554.1|BX250554  BX250554 Pinus pinaster differenciat...    60   4e-022
gb|AI812705.1|AI812705  18B3 Pine Lambda Zap Xylem library P...    64   5e-022
gb|DT633664.1|DT633664  EST1148595 Normalized pine embryo li...    57   8e-021
>gb|DR112556.1|DR112556 RTS1_29_B07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
           RTS1_29_B07_A029 3', mRNA sequence
          Length = 688

 Score = 89.0 bits (188), Expect(3) = 9e-049
 Identities = 29/47 (61%), Positives = 40/47 (85%)
 Frame = -2 / +2

                                                          
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           +D   I+ GAV+H+NGNMKPWLK+ M++YK+ W+ YV+YSHPL+QQC
Sbjct: 494 IDEQLIESGAVIHFNGNMKPWLKLAMKRYKAIWEMYVNYSHPLLQQC 634

 Score = 77.1 bits (162), Expect(3) = 9e-049
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D TLWKLG+LPPGLL+FYGL E LD +WHVLGLGY
Sbjct: 380 DRTLWKLGTLPPGLLSFYGLTEPLDRRWHVLGLGY 484

 Score = 66.6 bits (139), Expect(3) = 9e-049
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -3 / +2

                                         
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
           WAFGMNV DLV W+N NVT  YHYWQE+NV
Sbjct: 290 WAFGMNVFDLVAWKNANVTSRYHYWQEQNV 379
>gb|CO364079.1|CO364079 RTK1_13_C05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
           RTK1_13_C05_A029 5', mRNA sequence
          Length = 912

 Score = 92.7 bits (196), Expect(3) = 1e-048
 Identities = 31/47 (65%), Positives = 39/47 (82%)
 Frame = -2 / -1

                                                          
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           VD+  I+ GAVLHYNGNMKPWLK+ M +YKSFW+ YV+Y HP +Q+C
Sbjct: 333 VDMQLIESGAVLHYNGNMKPWLKLAMNRYKSFWEKYVNYLHPFLQKC 193

 Score = 76.2 bits (160), Expect(3) = 1e-048
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -2 / -1

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D TLWKLG+LPPGLL FYGL E LD +WH+LGLGY
Sbjct: 447 DRTLWKLGTLPPGLLTFYGLTEPLDRRWHILGLGY 343

 Score = 63.4 bits (132), Expect(3) = 1e-048
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -3 / -1

                                         
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
           WAFGMNV DLV W+  NVT  YHYWQE+NV
Sbjct: 537 WAFGMNVFDLVAWKKLNVTSRYHYWQEQNV 448

 Score = 53.8 bits (111), Expect(3) = 2e-021
 Identities = 28/62 (45%), Positives = 36/62 (58%)
 Frame = +1 / +2

                                                                       
Query: 460 LTKILMLIHINQRMKHC*IKGCE*ST*LSQKLLYFSIPILSHGFIFPL*CSTAPSLIVAR 639
           +T+  M++  +  M H    GC+* T  SQK LY  I   +HGF+FPL*C TAP  I   
Sbjct: 149 ITEEYMMLGQH*WMLHFCRNGCK*FTYFSQKDLYLFIASFNHGFMFPL*CKTAPLSISCM 328

             
Query: 640 ST 645
           ST
Sbjct: 329 ST 334

 Score = 43.2 bits (88), Expect(3) = 2e-021
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +3 / +2

                                        
Query: 756 TLRSCQ**YMPVTFLFLHSTRSSTFIPNA 842
           T  SCQ**Y  VT  F H+TRS+TFIP A
Sbjct: 449 TFCSCQ**YRLVTLSFFHATRSNTFIPKA 535

 Score = 42.8 bits (87), Expect(3) = 2e-021
 Identities = 18/33 (54%), Positives = 20/33 (60%)
 Frame = +1 / +2

                                            
Query: 652 *PSPKTCHLGSNASTKP*KARSPGGKDPSFHRV 750
           *PSP  C   S+ S +P*K   PGGK PSF  V
Sbjct: 344 *PSPSICQRRSSGSVRP*KVSKPGGKVPSFQSV 442
>gb|DR078574.1|DR078574 RTFEPL1_5_C09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
           RTFEPL1_5_C09_A029 5', mRNA sequence
          Length = 822

 Score = 92.7 bits (196), Expect(3) = 4e-042
 Identities = 31/47 (65%), Positives = 39/47 (82%)
 Frame = -2 / -3

                                                          
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           VD+  I+ GAVLHYNGNMKPWLK+ M +YKSFW+ YV+Y HP +Q+C
Sbjct: 643 VDMQLIESGAVLHYNGNMKPWLKLAMNRYKSFWEKYVNYLHPFLQKC 503

 Score = 76.2 bits (160), Expect(3) = 4e-042
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -2 / -3

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D TLWKLG+LPPGLL FYGL E LD +WH+LGLGY
Sbjct: 757 DRTLWKLGTLPPGLLTFYGLTEPLDRRWHILGLGY 653

 Score = 41.4 bits (84), Expect(3) = 4e-042
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3 / -3

                                
Query: 817 LVEWRNKNVTGIYHYWQERNV 755
           LV W+  NVT  YHYWQE+NV
Sbjct: 820 LVAWKKLNVTSRYHYWQEQNV 758
>gb|CF396558.1|CF396558 RTDS2_22_C09.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
           taeda cDNA clone RTDS2_22_C09_A021 5', mRNA sequence
          Length = 797

 Score = 80.3 bits (169), Expect(3) = 1e-041
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -2 / -3

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           +VD   I   AV+HYNGNMKPWL++ M KY+ +W  Y+ Y HP +QQC
Sbjct: 549 SVDRLEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPFLQQC 406

 Score = 70.7 bits (148), Expect(3) = 1e-041
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -2 / -3

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D  LWKLG+LPPGL+ FYGL   LD  WHVLGLGY
Sbjct: 660 DRVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGY 556

 Score = 57.4 bits (119), Expect(3) = 1e-041
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3 / -3

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMNV DL EW+ +++TGIYH WQ  N
Sbjct: 750 WAYGMNVFDLKEWKKQDITGIYHKWQNMN 664
>gb|DR686620.1|DR686620 EST1076698 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PWABI03 3' end, mRNA sequence
          Length = 866

 Score = 70.7 bits (148), Expect(3) = 7e-036
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D  LWKLG+LPPGL+ FYGL   LD  WHVLGLGY
Sbjct: 638 DRVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGY 742

 Score = 61.1 bits (127), Expect(3) = 7e-036
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = -2 / +2

                                                 
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYV 534
           +VD   I   AV+HYNGNMKPWL++ M KY+ +W  Y+
Sbjct: 749 SVDRLEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYI 862

 Score = 57.4 bits (119), Expect(3) = 7e-036
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3 / +2

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMNV DL EW+ +++TGIYH WQ  N
Sbjct: 548 WAYGMNVFDLKEWKKQDITGIYHKWQNMN 634
>gb|AW289781.1|AW289781 NXNV006B06F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
           NXNV006B06 5', mRNA sequence
          Length = 465

 Score = 65.7 bits (137), Expect(3) = 2e-035
 Identities = 24/35 (68%), Positives = 26/35 (74%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D  LWKLG+LPPGL+ FY L   LD  WHVLGLGY
Sbjct: 191 DRQLWKLGTLPPGLITFYHLTFVLDKSWHVLGLGY 295

 Score = 64.3 bits (134), Expect(3) = 2e-035
 Identities = 23/47 (48%), Positives = 28/47 (59%)
 Frame = -2 / +2

                                                          
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           VD   I+  AV+HYNGNMKPWL I + KY+ +W  YV Y       C
Sbjct: 305 VDSTEIERAAVIHYNGNMKPWLDIAIPKYRHYWTKYVKYDXXXXXLC 445

 Score = 57.9 bits (120), Expect(3) = 2e-035
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -3 / +2

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN+ DL EWR + +TGIYH WQ  N
Sbjct: 101 WAYGMNIFDLEEWRKQGITGIYHQWQNLN 187
>gb|CD028366.1|CD028366 NXNV006B06 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
           NXNV006B06 5' similar to Arabidopsis thaliana sequence
           At3g61130 unknown protein see
           http://mips.gsf.de/proj/thal/db/index.html, mRNA
           sequence
          Length = 465

 Score = 65.7 bits (137), Expect(3) = 2e-035
 Identities = 24/35 (68%), Positives = 26/35 (74%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D  LWKLG+LPPGL+ FY L   LD  WHVLGLGY
Sbjct: 191 DRQLWKLGTLPPGLITFYHLTFVLDKSWHVLGLGY 295

 Score = 63.8 bits (133), Expect(3) = 2e-035
 Identities = 22/39 (56%), Positives = 27/39 (69%)
 Frame = -2 / +2

                                                  
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDY 528
           VD   I+  AV+HYNGNMKPWL I + KY+ +W  YV Y
Sbjct: 305 VDSTEIERAAVIHYNGNMKPWLDIAIPKYRHYWTKYVKY 421

 Score = 57.9 bits (120), Expect(3) = 2e-035
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -3 / +2

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN+ DL EWR + +TGIYH WQ  N
Sbjct: 101 WAYGMNIFDLEEWRKQGITGIYHQWQNLN 187
>gb|DR014696.1|DR014696 HEAT1_51_C03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
           HEAT1_51_C03_A029 3', mRNA sequence
          Length = 914

 Score = 71.2 bits (149), Expect(3) = 5e-033
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -2 / +2

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVDY    +Q C
Sbjct: 347 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMC 490

 Score = 63.8 bits (133), Expect(3) = 5e-033
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 236 NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 340

 Score = 44.6 bits (91), Expect(3) = 5e-033
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3 / +2

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN   L  WR +  T  YHYWQ  N
Sbjct: 146 WAYGMNFFHLDAWRREKCTEEYHYWQNLN 232
>gb|DR689244.1|DR689244 EST1079330 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PWACF91 3' end, mRNA sequence
          Length = 854

 Score = 71.2 bits (149), Expect(3) = 5e-033
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -2 / +2

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVDY    +Q C
Sbjct: 467 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMC 610

 Score = 63.8 bits (133), Expect(3) = 5e-033
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 356 NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 460

 Score = 44.6 bits (91), Expect(3) = 5e-033
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3 / +2

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN   L  WR +  T  YHYWQ  N
Sbjct: 266 WAYGMNFFHLDAWRREKCTEEYHYWQNLN 352
>gb|DR109571.1|DR109571 RTS1_3_E05.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
           RTS1_3_E05_A029 3', mRNA sequence
          Length = 820

 Score = 71.2 bits (149), Expect(3) = 5e-033
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -2 / +3

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVDY    +Q C
Sbjct: 483 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMC 626

 Score = 63.8 bits (133), Expect(3) = 5e-033
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / +3

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 372 NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 476

 Score = 44.6 bits (91), Expect(3) = 5e-033
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3 / +3

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN   L  WR +  T  YHYWQ  N
Sbjct: 282 WAYGMNFFHLDAWRREKCTEEYHYWQNLN 368
>gb|DT635347.1|DT635347 EST1150278 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PIMGF84 3' end, mRNA sequence
          Length = 768

 Score = 71.2 bits (149), Expect(3) = 5e-033
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -2 / +1

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVDY    +Q C
Sbjct: 475 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMC 618

 Score = 63.8 bits (133), Expect(3) = 5e-033
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / +1

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 364 NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 468

 Score = 44.6 bits (91), Expect(3) = 5e-033
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3 / +1

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN   L  WR +  T  YHYWQ  N
Sbjct: 274 WAYGMNFFHLDAWRREKCTEEYHYWQNLN 360
>gb|DR169090.1|DR169090 RTPHOS1_30_A06.b1_A029 Roots minus phosphorous Pinus taeda cDNA
           clone RTPHOS1_30_A06_A029 3', mRNA sequence
          Length = 710

 Score = 71.2 bits (149), Expect(3) = 5e-033
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -2 / +3

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVDY    +Q C
Sbjct: 294 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMC 437

 Score = 63.8 bits (133), Expect(3) = 5e-033
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / +3

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 183 NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 287

 Score = 44.6 bits (91), Expect(3) = 5e-033
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3 / +3

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN   L  WR +  T  YHYWQ  N
Sbjct: 93  WAYGMNFFHLDAWRREKCTEEYHYWQNLN 179
>gb|CX713265.1|CX713265 RTPQ1_8_B07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
           clone RTPQ1_8_B07_A032 3', mRNA sequence
          Length = 702

 Score = 71.2 bits (149), Expect(3) = 5e-033
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -2 / +2

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVDY    +Q C
Sbjct: 269 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMC 412

 Score = 63.8 bits (133), Expect(3) = 5e-033
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 158 NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 262

 Score = 44.6 bits (91), Expect(3) = 5e-033
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3 / +2

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMN   L  WR +  T  YHYWQ  N
Sbjct: 68  WAYGMNFFHLDAWRREKCTEEYHYWQNLN 154
>gb|CX651405.1|CX651405 COLD1_52_D12.b1_A029 Root cold Pinus taeda cDNA clone
           COLD1_52_D12_A029 3', mRNA sequence
          Length = 659

 Score = 63.8 bits (133), Expect(3) = 8e-032
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -2 / +3

                                           
Query: 746 LWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           LW++G+LPP L+AF GLV  +DP WH+LGLGY
Sbjct: 246 LWRMGTLPPALIAFNGLVHPIDPSWHMLGLGY 341

 Score = 58.3 bits (121), Expect(3) = 8e-032
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -2 / +3

                                                         
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           +L +++  AV+HYNG  KPWL I   + +  W  YVD+S   I++C
Sbjct: 354 NLDSVQSAAVIHYNGRAKPWLDIAFHELRPLWAKYVDFSDEFIKRC 491

 Score = 53.3 bits (110), Expect(3) = 8e-032
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = -3 / +3

                                         
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
           WA+GMN+LDL  WR  N+   YHYW ++N+
Sbjct: 141 WAYGMNILDLQAWRRTNIKETYHYWLKKNL 230
>gb|BX249940.1|BX249940 BX249940 Pinus pinaster differenciating xylem adult Pinus pinaster
           cDNA clone PP030E08, mRNA sequence
          Length = 629

 Score = 71.6 bits (150), Expect(3) = 1e-026
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = -2 / -1

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVDY    IQ C
Sbjct: 491 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFIQMC 348

 Score = 63.8 bits (133), Expect(3) = 1e-026
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / -1

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 602 NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 498

 Score = 22.1 bits (42), Expect(3) = 1e-026
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -3 / -1

                   
Query: 781 YHYWQERN 758
           YHYWQ  N
Sbjct: 629 YHYWQNLN 606
>gb|BQ107024.1|BQ107024 NXLV085_F11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
           clone NXLV085_F11 5' similar to Arabidopsis thaliana
           sequence At2g20807 unknown protein see
           http://mips.gsf.de/proj/thal/db/index.html, mRNA
           sequence
          Length = 732

 Score = 76.2 bits (160), Expect(2) = 2e-026
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -2 / +2

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           D TLWKLG+LPPGLL FYGL E LD +WH+LGLGY
Sbjct: 545 DRTLWKLGTLPPGLLTFYGLTEPLDRRWHILGLGY 649

 Score = 63.4 bits (132), Expect(2) = 2e-026
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -3 / +2

                                         
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
           WAFGMNV DLV W+  NVT  YHYWQE+NV
Sbjct: 455 WAFGMNVFDLVAWKKLNVTSRYHYWQEQNV 544
>gb|BI202957.1|BI202957 NXPV_093_C03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
           cDNA clone NXPV_093_C03 5' similar to Arabidopsis
           thaliana sequence At3g25140 glycosyl transferase,
           putative see http://mips.gsf.de/proj/thal/db/index.html,
           mRNA sequence
          Length = 326

 Score = 63.8 bits (133), Expect(3) = 1e-025
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2 / +1

                                              
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           + TLWKLG+LPPGL+ +Y   + LD  WHVLGLGY
Sbjct: 88  NRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 192

 Score = 51.0 bits (105), Expect(3) = 1e-025
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2 / +1

                                                   
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDY 528
           ++ +  I+   V H+NGNMKPWL   M +Y+  W  Y  Y
Sbjct: 199 SISMDEIRNAXVXHFNGNMKPWLDXXMNQYRDTWTKYXXY 318

 Score = 39.6 bits (80), Expect(3) = 1e-025
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3 / +1

                                       
Query: 841 AFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           A+GMN   L  WR +  T  YHYWQ  N
Sbjct: 1   AYGMNFFHLDAWRREKCTEEYHYWQNLN 84
>gb|DR744023.1|DR744023 RTCU1_19_F03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
           RTCU1_19_F03_A029 5', mRNA sequence
          Length = 764

 Score = 64.3 bits (134), Expect(3) = 3e-024
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = -2 / -2

                                                        
Query: 785 HISLLAGAQCDHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           H  L      + TLW+LG+LPP L+AF G V  +DP WH+LGLGY
Sbjct: 646 HYWLKENLNSNLTLWRLGTLPPALIAFNGHVHPIDPSWHMLGLGY 512

 Score = 63.4 bits (132), Expect(3) = 3e-024
 Identities = 20/46 (43%), Positives = 30/46 (65%)
 Frame = -2 / -2

                                                         
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           DL  +++ AV+HYNG  KPWL I   + + FW  Y++YS+  I+ C
Sbjct: 499 DLNNVRKAAVIHYNGQAKPWLDIAFPELRPFWTKYINYSNEFIKNC 362

 Score = 22.1 bits (42), Expect(3) = 3e-024
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2 / -1

                                     
Query: 845 LGIWYERA*SG*MEEQECDRHISLLA 768
           +GIW E  *   +E+ +   ++SLLA
Sbjct: 713 MGIWNEHL*FASLEKDKHPGNLSLLA 636
>gb|DR015777.1|DR015777 STRS1_5_C07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
           cDNA clone STRS1_5_C07_A034 5', mRNA sequence
          Length = 716

 Score = 67.0 bits (140), Expect(2) = 1e-023
 Identities = 22/48 (45%), Positives = 31/48 (64%)
 Frame = -2 / +1

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NG MKPWL IGM +Y+  W  YVDY    +Q C
Sbjct: 109 SISMDEIRNAAVVHFNGFMKPWLDIGMNQYRDTWTKYVDYDMEFVQMC 252

 Score = 62.9 bits (131), Expect(2) = 1e-023
 Identities = 22/33 (66%), Positives = 25/33 (75%)
 Frame = -2 / +1

                                            
Query: 749 TLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           TLWKLG+LPPGL+ FY   + LD  WHV GLGY
Sbjct: 4   TLWKLGTLPPGLITFYKTTKPLDKSWHVFGLGY 102
>gb|DR015694.1|DR015694 STRS1_5_C07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
           cDNA clone STRS1_5_C07_A034 3', mRNA sequence
          Length = 690

 Score = 69.3 bits (145), Expect(2) = 1e-022
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = -2 / +1

                                                           
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           ++ +  I+  AV+H+NGNMKPWL IGM +Y+  W  YVD+    +Q C
Sbjct: 100 SISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDFDMEFVQMC 243

 Score = 57.4 bits (119), Expect(2) = 1e-022
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2 / +1

                                          
Query: 743 WKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           WKLG+LPPGL+ +Y   + LD  WHVLG GY
Sbjct: 1   WKLGTLPPGLITYYKTTKPLDKSWHVLGFGY 93
>gb|BX250554.1|BX250554 BX250554 Pinus pinaster differenciating xylem adult Pinus pinaster
           cDNA clone PP038D10, mRNA sequence
          Length = 370

 Score = 60.2 bits (125), Expect(3) = 4e-022
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -2 / +2

                                           
Query: 746 LWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           LW++G+LPP L+AF GLV  +D  WH+LGLGY
Sbjct: 62  LWRMGTLPPALIAFNGLVHPIDSSWHMLGLGY 157

 Score = 58.3 bits (121), Expect(3) = 4e-022
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -2 / +2

                                                         
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           +L +++  AV+HYNG  KPWL I   + +  W  YVD+S   I++C
Sbjct: 170 NLDSVQSAAVIHYNGRAKPWLDIAFHELRPLWAKYVDFSDEFIKRC 307

 Score = 24.0 bits (46), Expect(3) = 4e-022
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3 / +2

                         
Query: 796 NVTGIYHYWQERNV 755
           N+   YHYW ++N+
Sbjct: 5   NIKETYHYWLKKNL 46
>gb|AI812705.1|AI812705 18B3 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
          Length = 522

 Score = 63.8 bits (133), Expect(3) = 5e-022
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = -2 / +3

                                                          
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
           +D   I++  VLHYNGN+KPWL+IG+ KYK +W  Y+      + +C
Sbjct: 318 IDQLDIEKSPVLHYNGNLKPWLEIGINKYKPYWAKYLKQEGQFMLEC 458

 Score = 39.6 bits (80), Expect(3) = 5e-022
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2 / +3

                                          
Query: 743 WKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
           W+ G+LP  L+ FY +   L+  W  +GLG+
Sbjct: 216 WRFGTLPASLITFYNMTHRLEDSWLSVGLGH 308

 Score = 38.6 bits (78), Expect(3) = 5e-022
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3 / +3

                                    
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYW 770
           W  G+N++DL +WR +++T +Y  W
Sbjct: 111 WMSGLNIIDLQQWRKQDLTKVYRRW 185
>gb|DT633664.1|DT633664 EST1148595 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PIMFX37 3' end, mRNA sequence
          Length = 812

 Score = 57.4 bits (119), Expect(3) = 8e-021
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3 / +1

                                        
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
           WA+GMNV DL EW+ +++TGIYH WQ  N
Sbjct: 556 WAYGMNVFDLKEWKKQDITGIYHKWQNMN 642

 Score = 53.8 bits (111), Expect(3) = 8e-021
 Identities = 19/32 (59%), Positives = 21/32 (65%)
 Frame = -2 / +1

                                           
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLG 660
           D  LWKLG+LPPGL+ FYGL   LD  W   G
Sbjct: 646 DRVLWKLGTLPPGLITFYGLTHPLDKSWACAG 741

 Score = 26.7 bits (52), Expect(3) = 8e-021
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2 / +2

                             
Query: 647 TVDLATIKEGAVLHYNGN 594
           +VD   I   AV+HYNGN
Sbjct: 758 SVDRLEIDNAAVVHYNGN 811
  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 516,689,164
Number of Sequences: 355925
Number of extensions: 8034961
Number of successful extensions: 51196
Number of sequences better than 1.0e-020: 27
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12347140705
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)