TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2762998.2.1
(1036 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR742500.1|DR742500 RTCU1_4_A06.g1_A029 Roots plus added... 194 1e-078
gb|BG318003.1|BG318003 NXPV_008_D06_F NXPV (Nsf Xylem Plani... 172 2e-068
gb|CO363274.1|CO363274 RTK1_8_E09.g1_A029 Roots minus potas... 257 1e-067
gb|DR060568.1|DR060568 RTNIT1_28_D08.g1_A029 Roots minus ni... 166 2e-067
gb|DR013367.1|DR013367 HEAT1_18_H09.g1_A029 Root at 37 C fo... 194 1e-066
gb|CO363793.1|CO363793 RTK1_11_G09.g1_A029 Roots minus pota... 194 5e-065
gb|DR688621.1|DR688621 EST1078706 Normalized pine embryo li... 100 7e-065
gb|BG318895.1|BG318895 NXPV_021_B01_F NXPV (Nsf Xylem Plani... 146 1e-060
gb|CF389606.1|CF389606 RTDR2_8_H07.g1_A021 Loblolly pine ro... 138 2e-060
gb|CO164538.1|CO164538 FLD1_48_E04.g1_A029 Root flooded Pin... 195 4e-057
gb|CO366230.1|CO366230 RTK1_26_D08.g1_A029 Roots minus pota... 122 5e-052
gb|DR015797.1|DR015797 STRS1_5_E06.g1_A034 Shoot tip pitch ... 122 9e-052
gb|DR015090.1|DR015090 STRS1_1_A09.g1_A034 Shoot tip pitch ... 122 2e-051
gb|CF395939.1|CF395939 RTDS2_19_B12.g1_A021 Drought-stresse... 114 2e-051
gb|DR023078.1|DR023078 STRS1_55_H02.b1_A034 Shoot tip pitch... 120 2e-050
gb|DR096391.1|DR096391 STRR1_27_E04.g1_A033 Stem Response R... 120 2e-050
gb|CO366146.1|CO366146 RTK1_26_D08.b1_A029 Roots minus pota... 122 5e-049
gb|DR015011.1|DR015011 STRS1_1_A09.b1_A034 Shoot tip pitch ... 122 5e-049
gb|DR015715.1|DR015715 STRS1_5_E06.b1_A034 Shoot tip pitch ... 122 5e-049
gb|DR096615.1|DR096615 STRR1_29_C05.b1_A033 Stem Response R... 189 9e-049
gb|DR101994.1|DR101994 STRR1_77_H02.b1_A033 Stem Response R... 192 5e-048
gb|CO163019.1|CO163019 FLD1_39_A05.b1_A029 Root flooded Pin... 120 1e-047
gb|DR096311.1|DR096311 STRR1_27_E04.b1_A033 Stem Response R... 120 1e-047
gb|CF385877.1|CF385877 RTDR1_6_B08.g1_A015 Loblolly pine ro... 120 1e-047
gb|DR025340.1|DR025340 STRS1_71_C02.b1_A034 Shoot tip pitch... 118 3e-047
gb|CF471128.1|CF471128 RTDS1_16_B03.g1_A015 Drought-stresse... 127 5e-047
gb|DR684588.1|DR684588 EST1074665 Normalized pine embryo li... 103 2e-046
gb|CO360855.1|CO360855 NDL2_1_C02.b1_A029 Needles control 2... 110 5e-046
gb|CX649744.1|CX649744 COLD1_41_E10.b1_A029 Root cold Pinus... 110 5e-046
gb|DR019687.1|DR019687 STRS1_31_F01.g1_A034 Shoot tip pitch... 109 5e-046
gb|DR110348.1|DR110348 RTS1_10_H06.b1_A029 Roots minus sulf... 109 9e-046
gb|DR019280.1|DR019280 STRS1_28_H08.g1_A034 Shoot tip pitch... 109 9e-046
gb|DR080270.1|DR080270 RTFEPL1_21_B11.g1_A029 Roots plus ad... 101 4e-044
gb|DR025064.1|DR025064 STRS1_69_H05.b1_A034 Shoot tip pitch... 124 6e-044
gb|DR100575.1|DR100575 STRR1_65_E03.b1_A033 Stem Response R... 109 8e-044
gb|DR010883.1|DR010883 HEAT1_2_A03.b1_A029 Root at 37 C for... 120 8e-044
gb|CO201366.1|CO201366 RTCNT2_5_G02.b1_A029 Root control 2 ... 102 1e-043
gb|DR164121.1|DR164121 RTFE1_47_A02.b1_A029 Roots minus iro... 109 5e-043
gb|DR010959.1|DR010959 HEAT1_2_A03.g1_A029 Root at 37 C for... 105 2e-042
gb|DR023824.1|DR023824 STRS1_60_G02.b1_A034 Shoot tip pitch... 111 5e-042
gb|DR023208.1|DR023208 STRS1_56_D11.b1_A034 Shoot tip pitch... 108 3e-041
gb|CF388427.1|CF388427 RTDR2_3_D06.b1_A021 Loblolly pine ro... 163 4e-041
gb|CO201772.1|CO201772 RTCNT2_8_C01.b1_A029 Root control 2 ... 101 6e-041
gb|AI812586.1|AI812586 13F10 Pine Lambda Zap Xylem library ... 168 7e-041
gb|DT632273.1|DT632273 EST1147204 Normalized pine embryo li... 103 2e-040
gb|DN609073.1|DN609073 EST962123 Subtracted pine embryo lib... 165 5e-040
gb|DR387526.1|DR387526 RTHG1_22_H10.b1_A029 Roots plus adde... 159 7e-040
gb|DT627635.1|DT627635 EST1156384 Subtracted pine embryo li... 163 2e-039
gb|DR025148.1|DR025148 STRS1_69_H05.g1_A034 Shoot tip pitch... 95 3e-039
gb|DR088980.1|DR088980 RTAL1_5_G08.g1_A029 Roots plus added... 122 6e-039
gb|CO197962.1|CO197962 GEO1_10_H01.b1_A029 Root gravitropis... 95 4e-037
gb|DR011199.1|DR011199 HEAT1_4_E04.b1_A029 Root at 37 C for... 95 7e-037
gb|CF402333.1|CF402333 RTWW1_19_H10.g1_A015 Well-watered lo... 84 7e-037
gb|CF663334.1|CF663334 RTCNT1_2_F02.b1_A029 Root control Pi... 109 1e-036
gb|DR180563.1|DR180563 RTMNUT1_33_A08.g1_A029 Roots minus m... 109 3e-036
gb|DR061024.1|DR061024 RTNIT1_31_C11.g1_A029 Roots minus ni... 152 5e-036
gb|CO164464.1|CO164464 FLD1_48_E04.b1_A029 Root flooded Pin... 151 6e-036
gb|DR019614.1|DR019614 STRS1_31_F01.b1_A034 Shoot tip pitch... 109 2e-035
gb|CF665238.1|CF665238 RTCNT1_14_F08.g1_A029 Root control P... 122 4e-035
gb|DR023163.1|DR023163 STRS1_55_H02.g1_A034 Shoot tip pitch... 91 1e-034
gb|AA556491.1|AA556491 346 Loblolly pine C Pinus taeda cDNA... 100 2e-034
gb|DR015799.1|DR015799 STRS1_5_E08.g1_A034 Shoot tip pitch ... 145 4e-034
gb|CF388518.1|CF388518 RTDR2_3_D06.g1_A021 Loblolly pine ro... 143 2e-033
gb|DR180489.1|DR180489 RTMNUT1_33_A08.b1_A029 Roots minus m... 95 5e-033
gb|DR011220.1|DR011220 HEAT1_4_G04.b1_A029 Root at 37 C for... 95 5e-033
gb|CF475656.1|CF475656 RTWW2_11_G01.g1_A021 Well-watered lo... 142 5e-033
gb|DR089020.1|DR089020 RTAL1_6_C10.b1_A029 Roots plus added... 142 5e-033
gb|DR089108.1|DR089108 RTAL1_6_C10.g1_A029 Roots plus added... 142 5e-033
gb|CR392439.1|CR392439 CR392439 RN Pinus pinaster cDNA clon... 139 2e-032
gb|DR060564.1|DR060564 RTNIT1_28_D04.g1_A029 Roots minus ni... 85 3e-032
gb|CX649872.1|CX649872 COLD1_42_B04.b1_A029 Root cold Pinus... 112 4e-032
gb|CO201441.1|CO201441 RTCNT2_5_G02.g1_A029 Root control 2 ... 95 2e-031
gb|DR088709.1|DR088709 RTAL1_4_A06.b1_A029 Roots plus added... 136 3e-031
gb|CV035921.1|CV035921 RTNACL1_43_H10.b1_A029 Roots plus ad... 109 7e-031
gb|DR384322.1|DR384322 RTHG1_1_B06.g1_A029 Roots plus added... 109 7e-031
gb|DR017058.1|DR017058 STRS1_13_G02.g1_A034 Shoot tip pitch... 132 5e-030
gb|DR016975.1|DR016975 STRS1_13_G02.b1_A034 Shoot tip pitch... 123 4e-029
gb|CF389580.1|CF389580 RTDR2_8_H07.b1_A021 Loblolly pine ro... 114 8e-029
gb|DR020503.1|DR020503 STRS1_37_A06.g1_A034 Shoot tip pitch... 127 1e-028
gb|CX649941.1|CX649941 COLD1_42_B04.g1_A029 Root cold Pinus... 112 2e-028
gb|BX252130.1|BX252130 BX252130 Pinus pinaster differenciat... 97 1e-027
gb|CF665153.1|CF665153 RTCNT1_14_F08.b1_A029 Root control P... 122 3e-027
gb|DR181406.1|DR181406 RTMNUT1_38_E11.g2_A029 Roots minus m... 121 1e-026
gb|BX252924.1|BX252924 BX252924 Pinus pinaster differenciat... 120 1e-026
gb|CF396615.1|CF396615 RTDS2_23_D12.b1_A021 Drought-stresse... 120 2e-026
gb|CO364071.1|CO364071 RTK1_13_B07.g1_A029 Roots minus pota... 95 3e-026
gb|DR070035.1|DR070035 RTDK1_10_H04.g1_A029 Roots, dark Pin... 93 4e-026
gb|CX712582.1|CX712582 RTPQ1_3_H12.b2_A032 Roots treated wi... 117 1e-025
gb|CX712663.1|CX712663 RTPQ1_3_H12.g1_A032 Roots treated wi... 117 1e-025
gb|DR111675.1|DR111675 RTS1_19_A09.g1_A029 Roots minus sulf... 71 1e-025
gb|DR167227.1|DR167227 RTPHOS1_17_B06.g1_A029 Roots minus p... 98 1e-025
gb|CO369208.1|CO369208 RTK1_45_D11.g1_A029 Roots minus pota... 98 1e-025
gb|DR182297.1|DR182297 RTMNUT1_44_D03.b1_A029 Roots minus m... 98 1e-025
gb|CO201847.1|CO201847 RTCNT2_8_C01.g1_A029 Root control 2 ... 98 1e-025
gb|DR024776.1|DR024776 STRS1_67_H12.b1_A034 Shoot tip pitch... 90 2e-025
gb|AA739757.1|AA739757 522 PtIFG2 Pinus taeda cDNA clone 88... 116 3e-025
gb|BX677734.1|BX677734 BX677734 RN Pinus pinaster cDNA clon... 90 4e-025
gb|DR025425.1|DR025425 STRS1_71_C02.g1_A034 Shoot tip pitch... 91 4e-025
gb|DR023748.1|DR023748 STRS1_59_F11.g1_A034 Shoot tip pitch... 113 2e-024
gb|DR746334.1|DR746334 RTCU1_36_F12.b1_A029 Roots plus adde... 110 2e-023
gb|DR746414.1|DR746414 RTCU1_36_F12.g1_A029 Roots plus adde... 110 2e-023
gb|CF666142.1|CF666142 RTCNT1_21_D03.b1_A029 Root control P... 109 3e-023
gb|DR069855.1|DR069855 RTDK1_9_G08.g1_A029 Roots, dark Pinu... 109 3e-023
gb|DR178115.1|DR178115 RTMNUT1_9_A04.g1_A029 Roots minus mi... 109 3e-023
gb|CX649826.1|CX649826 COLD1_41_E10.g1_A029 Root cold Pinus... 106 2e-022
gb|BI397915.1|BI397915 NXPV_112_B04_F NXPV (Nsf Xylem Plani... 105 3e-022
gb|CO164835.1|CO164835 FLD1_50_D04.g1_A029 Root flooded Pin... 104 1e-021
gb|DR180099.1|DR180099 RTMNUT1_26_A12.g1_A029 Roots minus m... 84 2e-021
gb|DR024454.1|DR024454 STRS1_65_C07.b1_A034 Shoot tip pitch... 101 7e-021
>gb|DR742500.1|DR742500 RTCU1_4_A06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_4_A06_A029 5', mRNA sequence
Length = 814
Score = 194 bits (419), Expect(2) = 1e-078
Identities = 75/119 (63%), Positives = 98/119 (82%)
Frame = -2 / -1
Query: 570 EKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYI 391
E +PMSI WQIPQYFLVGA+EVFT +GQ+EFFYDQ+PDAMRSLCSAL+L+T +LGNY+
Sbjct: 598 EGTPIPMSIFWQIPQYFLVGASEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTALGNYL 419
Query: 390 SSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
SS+I+T+V + TT+GG+ GWIPDNLNEGHLD +FW++A +S ++ + CA + KK
Sbjct: 418 SSLIVTVVMFATTKGGNVGWIPDNLNEGHLDYYFWVLASLSLLNLLVYVSCAHRYKYKK 242
Score = 119 bits (255), Expect(2) = 1e-078
Identities = 46/73 (63%), Positives = 65/73 (89%)
Frame = -2 / -1
Query: 783 STFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKR 604
S FDV+SV++WVP+YDR++VP+ K+T RE+GF+ELQRMGIGL +SILAMV+AALVE++R
Sbjct: 814 SVFDVLSVMVWVPVYDRLVVPIVSKYTKRERGFTELQRMGIGLFISILAMVAAALVEIRR 635
Query: 603 LEIARSEGLIHEK 565
L IA++ L+H++
Sbjct: 634 LSIAKAYDLVHDE 596
Score = 119 bits (254), Expect(2) = 5e-043
Identities = 59/97 (60%), Positives = 68/97 (70%)
Frame = +2 / +3
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLL 445
+L A QK SRWPSF+LSGIHP PP VV T V++ L *FP+ V SALHKL
Sbjct: 294 RLSEANTQK**SRWPSFKLSGIHPTFPPFVVANITTVTIRLLK*FPNAVVRRESALHKLR 473
Query: 446 MASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIG 556
+ASG S*KNS+ P +V TS APTKKY GICQ+MLIG
Sbjct: 474 IASGDWS*KNSSCPTKVKTSDAPTKKYWGICQKMLIG 584
Score = 76.2 bits (160), Expect(2) = 5e-043
Identities = 39/62 (62%), Positives = 41/62 (66%)
Frame = +2 / +3
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLI 769
LAI R STRAA TIA +D PIPIRCSS P SL V L GT RS*+GTH MTL
Sbjct: 621 LAILNRLISTRAAATIASIDIKRPIPIRCSSVNPRSLLVYLLTIGTTRRS*TGTHTMTLR 800
Query: 770 TS 775
TS
Sbjct: 801 TS 806
>gb|BG318003.1|BG318003 NXPV_008_D06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_008_D06 5' similar to Arabidopsis
thaliana sequence At5g01180 oligopeptide transporter -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 581
Score = 172 bits (370), Expect(2) = 2e-068
Identities = 65/102 (63%), Positives = 87/102 (85%)
Frame = -2 / +3
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+E+ +PMSI WQ+PQYFL+GA+E+FT IGQ+EFFYDQAPDAMRSL SA++L TV+LGNY
Sbjct: 207 YERLHIPMSIFWQVPQYFLIGASEIFTFIGQLEFFYDQAPDAMRSLMSAVSLTTVALGNY 386
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGIS 268
+S++++T+V+ ITT+ G GW DNLN GH+D FFWL+A +S
Sbjct: 387 LSTLLVTIVTDITTRHGKKGWXXDNLNYGHIDYFFWLLAILS 512
Score = 108 bits (230), Expect(2) = 2e-068
Identities = 41/63 (65%), Positives = 55/63 (87%)
Frame = -2 / +3
Query: 777 FDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLE 598
FD +SVI WVP+YDR++VPLARK+TG ++GF++LQRMGIGLV+SI +MV A LVE+KRL
Sbjct: 6 FDTLSVIFWVPVYDRLIVPLARKYTGHQRGFTQLQRMGIGLVISIFSMVIAGLVEIKRLN 185
Query: 597 IAR 589
+ +
Sbjct: 186 MVK 194
Score = 94.5 bits (200), Expect(2) = 4e-031
Identities = 52/99 (52%), Positives = 65/99 (65%)
Frame = +2 / -2
Query: 278 AINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLMASG 457
A +QK S P F+LS IHP P VVM T V+ L * P+ TV+S +AL KL +ASG
Sbjct: 502 ARSQKK*SICP*FKLSXIHPFFPCLVVMSVTMVTSRVLR*LPNATVVSETALIKLRIASG 323
Query: 458 A*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS* 574
A*S*KNS+ P++V S AP KKY G CQ++L+G S*
Sbjct: 322 A*S*KNSSCPMKVKISEAPIKKYWGTCQKILMGMCNLS* 206
Score = 61.1 bits (127), Expect(2) = 4e-031
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +2 / -2
Query: 614 STRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLITSKV 781
STR A T+ +++ T PIPIRCS KP PV ASGT RS*+GT MTL S +
Sbjct: 169 STRPAITMEKIEMTKPIPIRCSWVKPL**PVYLRASGTIRRS*TGTQNMTLRVSNI 2
>gb|CO363274.1|CO363274 RTK1_8_E09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_8_E09_A029 5', mRNA sequence
Length = 703
Score = 257 bits (555), Expect = 1e-067
Identities = 100/146 (68%), Positives = 126/146 (86%)
Frame = -2 / -3
Query: 696 EKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFL 517
E+GF+ELQRMGIGLV+SILAM AA++E+KRL +AR L+ + VP+SI WQIPQYFL
Sbjct: 698 ERGFTELQRMGIGLVISILAMSVAAILEIKRLAVAREAHLVDQNVPVPLSIFWQIPQYFL 519
Query: 516 VGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDP 337
+G AE+FT IG +EFFYDQ+PDAMRSLCSAL L+T + GNY+S+ ILT+V+Y TT+GG+P
Sbjct: 518 IGLAEIFTFIGALEFFYDQSPDAMRSLCSALNLLTTAGGNYLSTFILTMVAYFTTRGGNP 339
Query: 336 GWIPDNLNEGHLDRFFWLIAGISFVD 259
GWIPDNLNEGHLD FFWL+AG+SF++
Sbjct: 338 GWIPDNLNEGHLDYFFWLLAGLSFLN 261
Score = 159 bits (342), Expect = 3e-038
Identities = 82/145 (56%), Positives = 93/145 (64%)
Frame = +2 / +1
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLL 445
KL PA +QK SR PSF+LSGIHPG PP VV Y T V M L *FP V SAL +LL
Sbjct: 268 KLRPARSQKK*SRCPSFKLSGIHPGLPPLVVKYATIVKMNVLR*FPPAVVRRLSALQRLL 447
Query: 446 MASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*MRPSDLAISKRFNSTRA 625
MASG S*KNS+ P+ V SA P +KY GICQ ML GT F R + LA + R S A
Sbjct: 448 MASGDWS*KNSSAPMNVKISARPIRKY*GICQNMLSGTGTF*STRCASLATASRLISRIA 627
Query: 626 ADTIARMDRTNPIPIRCSSEKPFSL 700
A IARM+ T P+PI C+S KP SL
Sbjct: 628 ATDIARMEMTRPMPILCNSVKPLSL 702
Score = 111 bits (238), Expect = 6e-024
Identities = 51/137 (37%), Positives = 78/137 (56%)
Frame = +1 / +3
Query: 286 PKEPVEMAFIQIVRDPSRISSLSCNVRHQCQYDGAYIVSQ*DCNXXXXXXXXPHGIWGLI 465
P+E ++M F+Q+VR+PSR++S VR CQ + A IV PHG+W L+
Sbjct: 288 PEEVIKMPFVQVVRNPSRVTSPRSKVRDHCQNERAEIVPTRSSEKIKCTAEAPHGVW*LV 467
Query: 466 VKELNLTNTSKHLSSAHQEILWYLPKNAHWNSSLLMNETFRPGNL*TLQLN*SCRYHREN 645
+KEL ++ ++L +QEIL LP+ A W+ +L+++ PGN * L H ++
Sbjct: 468 IKELKRSDECENLC*TNQEILRDLPEYAQWDRDILIHQVCFPGNC*PLDFEDCSDRHSKD 647
Query: 646 GQD*SNSHPL*LRKTLL 696
G D +N+HPL L K L
Sbjct: 648 GNDQANAHPLQLCKAPL 698
>gb|DR060568.1|DR060568 RTNIT1_28_D08.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_28_D08_A029 5', mRNA sequence
Length = 781
Score = 166 bits (356), Expect(2) = 2e-067
Identities = 62/100 (62%), Positives = 81/100 (81%)
Frame = -2 / -2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
VP+SILWQIPQY L+G AE F GQ+EFFY++APDAMR+LCSAL+ ++ + GNY SS++
Sbjct: 498 VPLSILWQIPQYVLLGVAETFVLAGQLEFFYEEAPDAMRTLCSALSHLSTAFGNYFSSVL 319
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ +V ITT+GG GWIP NLNEGHLD +FWL A +SF++
Sbjct: 318 VIVVMLITTRGGSVGWIPSNLNEGHLDYYFWLWAALSFLN 199
Score = 111 bits (236), Expect(2) = 2e-067
Identities = 43/82 (52%), Positives = 62/82 (75%)
Frame = -2 / -2
Query: 813 GSFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAM 634
G FNIP ASL F+ ++ ++WV +YD I+ P RK+ G EKGFSELQRMGIG + ++ +M
Sbjct: 756 GHFNIPAASLYMFNSVTCMLWVLVYDFIIAPAMRKWKGNEKGFSELQRMGIGKLFAMFSM 577
Query: 633 VSAALVELKRLEIARSEGLIHE 568
V AA++E+KRL++ RS L+H+
Sbjct: 576 VCAAILEIKRLQVVRSHNLVHD 511
Score = 97.7 bits (207), Expect(2) = 3e-033
Identities = 50/98 (51%), Positives = 60/98 (61%)
Frame = +2 / +2
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLL 445
KL A +QK SR PSF+L GIHP PP VV+ T ++ EL * P+ + AL ++
Sbjct: 206 KLNAAHSQK**SR*PSFKLLGIHPTLPPLVVISITTITSTELK*LPNAVLRWDRALQRVR 385
Query: 446 MASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGT 559
MASGA S*KNS P N SA P YCGIC +ML GT
Sbjct: 386 MASGASS*KNSNCPANTNVSATPNNTYCGICHKMLRGT 499
Score = 64.8 bits (135), Expect(2) = 3e-033
Identities = 32/78 (41%), Positives = 42/78 (53%)
Frame = +2 / +2
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLI 769
L R S AA TI M PIPIRC+SE PFS P +FL +G ++S + T M +
Sbjct: 533 LTTCNRLISRIAAHTIENMANNLPIPIRCNSENPFSFPFHFLIAGAMIKSYTKTQSMQVT 712
Query: 770 TSKVERDAGGMLKDPMRL 823
+ +A G+LK P L
Sbjct: 713 LLNMYSEAAGILKWPPML 766
>gb|DR013367.1|DR013367 HEAT1_18_H09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_18_H09_A029 5', mRNA sequence
Length = 700
Score = 194 bits (419), Expect(2) = 1e-066
Identities = 75/119 (63%), Positives = 98/119 (82%)
Frame = -2 / +3
Query: 570 EKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYI 391
E +PMSI WQIPQYFLVGA+EVFT +GQ+EFFYDQ+PDAMRSLCSAL+L+T +LGNY+
Sbjct: 150 EGTPIPMSIFWQIPQYFLVGASEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTALGNYL 329
Query: 390 SSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
SS+I+T+V + TT+GG+ GWIPDNLNEGHLD +FW++A +S ++ + CA + KK
Sbjct: 330 SSLIVTVVMFATTKGGNVGWIPDNLNEGHLDYYFWVLASLSLLNLLVYVSCAHRYKYKK 506
Score = 119 bits (254), Expect(2) = 2e-035
Identities = 59/97 (60%), Positives = 68/97 (70%)
Frame = +2 / -1
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLL 445
+L A QK SRWPSF+LSGIHP PP VV T V++ L *FP+ V SALHKL
Sbjct: 454 RLSEANTQK**SRWPSFKLSGIHPTFPPFVVANITTVTIRLLK*FPNAVVRRESALHKLR 275
Query: 446 MASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIG 556
+ASG S*KNS+ P +V TS APTKKY GICQ+MLIG
Sbjct: 274 IASGDWS*KNSSCPTKVKTSDAPTKKYWGICQKMLIG 164
Score = 79.4 bits (167), Expect(2) = 1e-066
Identities = 32/49 (65%), Positives = 44/49 (89%)
Frame = -2 / +3
Query: 711 KFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLIHEK 565
K+T RE+GF+ELQRMGIGL +SILAMV+AALVE++RL IA++ L+H++
Sbjct: 6 KYTKRERGFTELQRMGIGLFISILAMVAAALVEIRRLSIAKAYDLVHDE 152
Score = 50.6 bits (104), Expect(2) = 2e-035
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = +2 / -1
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFL 715
LAI R STRAA TIA +D PIPIRCSS P SL V L
Sbjct: 127 LAILNRLISTRAAATIASIDIKRPIPIRCSSVNPRSLLVYLL 2
>gb|CO363793.1|CO363793 RTK1_11_G09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_G09_A029 5', mRNA sequence
Length = 710
Score = 194 bits (419), Expect(2) = 5e-065
Identities = 75/119 (63%), Positives = 98/119 (82%)
Frame = -2 / -1
Query: 570 EKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYI 391
E +PMSI WQIPQYFLVGA+EVFT +GQ+EFFYDQ+PDAMRSLCSAL+L+T +LGNY+
Sbjct: 578 EGTPIPMSIFWQIPQYFLVGASEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTALGNYL 399
Query: 390 SSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
SS+I+T+V + TT+GG+ GWIPDNLNEGHLD +FW++A +S ++ + CA + KK
Sbjct: 398 SSLIVTVVMFATTKGGNVGWIPDNLNEGHLDYYFWVLASLSLLNLLVYVSCAHRYKYKK 222
Score = 119 bits (254), Expect(2) = 2e-034
Identities = 59/97 (60%), Positives = 68/97 (70%)
Frame = +2 / +1
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLL 445
+L A QK SRWPSF+LSGIHP PP VV T V++ L *FP+ V SALHKL
Sbjct: 274 RLSEANTQK**SRWPSFKLSGIHPTFPPFVVANITTVTIRLLK*FPNAVVRRESALHKLR 453
Query: 446 MASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIG 556
+ASG S*KNS+ P +V TS APTKKY GICQ+MLIG
Sbjct: 454 IASGDWS*KNSSCPTKVKTSDAPTKKYWGICQKMLIG 564
Score = 74.4 bits (156), Expect(2) = 5e-065
Identities = 30/45 (66%), Positives = 41/45 (91%)
Frame = -2 / -1
Query: 699 REKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLIHEK 565
RE+GF+ELQRMGIGL +SILAMV+AALVE++RL IA++ L+H++
Sbjct: 710 RERGFTELQRMGIGLFISILAMVAAALVEIRRLSIAKAYDLVHDE 576
Score = 47.3 bits (97), Expect(2) = 2e-034
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +2 / +1
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFS 697
LAI R STRAA TIA +D PIPIRCSS P S
Sbjct: 601 LAILNRLISTRAAATIASIDIKRPIPIRCSSVNPRS 708
>gb|DR688621.1|DR688621 EST1078706 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC846 3' end, mRNA sequence
Length = 524
Score = 100 bits (214), Expect(3) = 7e-065
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -2 / +2
Query: 570 EKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSAL 424
E +PMSI WQIPQYFLVGA+EVFT +GQ+EFFYDQ+PDAMRSLCSAL
Sbjct: 173 EGTPIPMSIFWQIPQYFLVGASEVFTFVGQLEFFYDQSPDAMRSLCSAL 319
Score = 95.0 bits (201), Expect(3) = 7e-065
Identities = 34/63 (53%), Positives = 51/63 (80%)
Frame = -2 / +3
Query: 423 ALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPM 244
+L+T +LGNY+SS+I+T+V + TT+GG+ GWIPDNLNEGHLD +FW++A +S ++ +
Sbjct: 321 SLLTTALGNYLSSLIVTVVMFATTKGGNVGWIPDNLNEGHLDYYFWVLASLSLLNLLVYV 500
Query: 243 GCA 235
CA
Sbjct: 501 SCA 509
Score = 91.3 bits (193), Expect(3) = 7e-065
Identities = 36/58 (62%), Positives = 51/58 (87%)
Frame = -2 / +2
Query: 738 DRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLIHEK 565
DR++VP+ K+T RE+GF+ELQRMGIGL +SILAMV+AALVE++RL IA++ L+H++
Sbjct: 2 DRLVVPIVSKYTKRERGFTELQRMGIGLFISILAMVAAALVEIRRLSIAKAYDLVHDE 175
Score = 70.3 bits (147), Expect(3) = 1e-033
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +2 / -3
Query: 425 SALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIG 556
SALHKL +ASG S*KNS+ P +V TS APTKKY GICQ+MLIG
Sbjct: 318 SALHKLRIASGDWS*KNSSCPTKVKTSDAPTKKYWGICQKMLIG 187
Score = 57.9 bits (120), Expect(3) = 1e-033
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +2 / -3
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS 739
LAI R STRAA TIA +D PIPIRCSS P SL V L GT RS
Sbjct: 150 LAILNRLISTRAAATIASIDIKRPIPIRCSSVNPRSLLVYLLTIGTTRRS 1
Score = 54.2 bits (112), Expect(3) = 1e-033
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +2 / -2
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETV 415
+L A QK SRWPSF+LSGIHP PP VV T V++ L *FP+ V
Sbjct: 478 RLSEANTQK**SRWPSFKLSGIHPTFPPFVVANITTVTIRLLK*FPNAVV 329
>gb|BG318895.1|BG318895 NXPV_021_B01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_021_B01 5' similar to Arabidopsis
thaliana sequence At5g01180 oligopeptide transporter -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 479
Score = 146 bits (313), Expect(2) = 1e-060
Identities = 56/91 (61%), Positives = 74/91 (81%)
Frame = -2 / +3
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+E+ +PMSI WQ+PQYFL+GA+E+FT IGQ+EFFYDQAPDAMRSL SA++L TV+L NY
Sbjct: 207 YERLHIPMSIFWQVPQYFLIGASEIFTFIGQLEFFYDQAPDAMRSLMSAVSLTTVALCNY 386
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHL 301
+S++++ V+ ITT G WIPDN N GH+
Sbjct: 387 LSTLLVXXVTDITTXHGXXXWIPDNXNYGHI 479
Score = 108 bits (230), Expect(2) = 1e-060
Identities = 41/63 (65%), Positives = 55/63 (87%)
Frame = -2 / +3
Query: 777 FDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLE 598
FD +SVI WVP+YDR++VPLARK+TG ++GF++LQRMGIGLV+SI +MV A LVE+KRL
Sbjct: 6 FDTLSVIFWVPVYDRLIVPLARKYTGHQRGFTQLQRMGIGLVISIFSMVIAGLVEIKRLN 185
Query: 597 IAR 589
+ +
Sbjct: 186 MVK 194
Score = 85.4 bits (180), Expect(2) = 2e-028
Identities = 46/89 (51%), Positives = 57/89 (64%)
Frame = +2 / -2
Query: 308 PSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*P 487
P F LSGIH P VVM T + L * + TV+S +AL KL +ASGA*S*KNS+ P
Sbjct: 472 P*FXLSGIHXXXPXXVVMSVTXXTSRVLR*LHNATVVSETALIKLRIASGA*S*KNSSCP 293
Query: 488 IQVNTSAAPTKKYCGICQRMLIGTAAFS* 574
++V S AP KKY G CQ++L+G S*
Sbjct: 292 MKVKISEAPIKKYWGTCQKILMGMCNLS* 206
Score = 61.1 bits (127), Expect(2) = 2e-028
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +2 / -2
Query: 614 STRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLITSKV 781
STR A T+ +++ T PIPIRCS KP PV ASGT RS*+GT MTL S +
Sbjct: 169 STRPAITMEKIEMTKPIPIRCSWVKPL**PVYLRASGTIRRS*TGTQNMTLRVSNI 2
>gb|CF389606.1|CF389606 RTDR2_8_H07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_H07_A021 5', mRNA
sequence
Length = 768
Score = 138 bits (297), Expect(2) = 2e-060
Identities = 58/131 (44%), Positives = 89/131 (67%)
Frame = -2 / +2
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGSFNIPPASLSTFDV 769
V E+K M PIWAT I+F +YAQ + + Q +++ IG+F IP SL+ F V
Sbjct: 65 VSKVEEVKQIIRMMPIWATTIMFWTIYAQMVTFSVAQASHMERGIGNFEIPSGSLTVFFV 244
Query: 768 ISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIAR 589
++++ + LYDRI++ LAR++TG ++GF+ LQR+G GL LS LAMV+AA+ E KRL +AR
Sbjct: 245 GAILVTIALYDRIIMSLARRWTGHQQGFTALQRIGFGLALSCLAMVAAAVTESKRLRVAR 424
Query: 588 SEGLIHEKAAV 556
+ GL+ + ++
Sbjct: 425 AHGLLDKPNSI 457
Score = 114 bits (244), Expect(2) = 2e-060
Identities = 41/100 (41%), Positives = 72/100 (72%)
Frame = -2 / +2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
VP+S+ IPQ+ LVGA E F GQ++FF ++P+ M+++ + L L T++LG ++SS++
Sbjct: 458 VPISVFVLIPQFVLVGAGEAFIYAGQLDFFIRESPEGMKTMSTGLFLSTLALGFFLSSLL 637
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+++V+ +TT PGW+ +NLN G L+ F+WL+A +S ++
Sbjct: 638 VSIVNLVTTSNSHPGWLTNNLNRGRLNNFYWLVALMSLLN 757
>gb|CO164538.1|CO164538 FLD1_48_E04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_E04_A029 5', mRNA sequence
Length = 881
Score = 195 bits (421), Expect(2) = 4e-057
Identities = 83/183 (45%), Positives = 118/183 (64%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP A+L F + +++ VP+YDR VP R+ TG +G + LQRMGIG + IL MV
Sbjct: 321 FQIPAATLGAFITLCMLISVPIYDRYFVPFIRRHTGNPRGITLLQRMGIGYFIQILVMVI 500
Query: 627 AALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDA 448
A+ E+KRL + L VP+SI W +PQY L+G A+VFT I +EFFYDQ+P
Sbjct: 501 ASATEVKRLRVISEHNLTSTMEPVPISIFWLLPQYVLLGVADVFTTIAMLEFFYDQSPGD 680
Query: 447 MRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGIS 268
M+SL +AL ++ +GN+ISS +LT V+ IT + G WI +NLN+ HLD ++ IA +
Sbjct: 681 MQSLGTALFPSSLGIGNFISSFLLTTVANITGRRGHKSWILNNLNDSHLDYYYGFIAILC 860
Query: 267 FVD 259
F++
Sbjct: 861 FLN 869
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 68/168 (40%), Positives = 80/168 (47%)
Frame = +2 / -2
Query: 299 SRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLMASGA*S*KNS 478
SRW SFRL I P VM T VS LI P ++ SA+ KL M+ G *S*KNS
Sbjct: 829 SRWESFRLLRIQLLCPLRPVMLATVVSRKLLIKLPIPRLLGKSAVPKLCMSPGD*S*KNS 650
Query: 479 T*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*MRPSDLAISKRFNSTRAADTIARMDRTN 658
I VNTSA P K Y G Q +L+GT + +R L F S A T+ R+
Sbjct: 649 NMAIVVNTSATPNKTY*GNSQNILMGTGSIVLVRLCSLITRSLFTSVAEAMTMTRI*MK* 470
Query: 659 PIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLITSKVERDAGGM 802
PIPI C P PV GT+ RS GT M R A G+
Sbjct: 469 PIPILCRRVIPLGFPV*RRMKGTK*RSYIGTEMSMQSVMNAPRVAAGI 326
Score = 46.9 bits (96), Expect(2) = 4e-057
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2 / +3
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGS 808
V E K M P+W +I S V AQ ++MF++QG +D+ +GS
Sbjct: 174 VTQVEETKLMMGMLPVWLATLIPSTVLAQVNTMFVKQGATMDRHVGS 314
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2 / -2
Query: 809 DPMRLSRTMPCSMNMEEFWA*TALNMIAVAQMGNIXXXIFNSXXXXT 949
+P LS PC N+ WA T L M +Q G+I F S T
Sbjct: 313 EPTCLSMVAPCFTNIVFTWAKTVLGMRVASQTGSIPIMSFVSSTCVT 173
>gb|CO366230.1|CO366230 RTK1_26_D08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_26_D08_A029 5', mRNA sequence
Length = 825
Score = 122 bits (262), Expect(3) = 5e-052
Identities = 46/96 (47%), Positives = 66/96 (68%)
Frame = -2 / +2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ T +LG+Y+S+
Sbjct: 410 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCTAALGHYLSA 589
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 590 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 697
Score = 92.7 bits (196), Expect(3) = 5e-052
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = -2 / +2
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QRMGIG +S L+M+
Sbjct: 164 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRMGIGFFISALSMLV 343
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 344 AGLVEVKRRNTALSHGLADQPSAI 415
Score = 28.6 bits (56), Expect(3) = 5e-052
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2 / +2
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGS 808
ELK + PI++ I +Q + + Q + +D+R+GS
Sbjct: 32 ELKSIMRIVPIFSCGIANQITNSQQHTFSVLQALSMDRRLGS 157
>gb|DR015797.1|DR015797 STRS1_5_E06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_E06_A034 5', mRNA sequence
Length = 823
Score = 122 bits (262), Expect(3) = 9e-052
Identities = 46/96 (47%), Positives = 66/96 (68%)
Frame = -2 / +2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ T +LG+Y+S+
Sbjct: 458 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCTAALGHYLSA 637
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 638 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 745
Score = 92.7 bits (196), Expect(3) = 9e-052
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = -2 / +2
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QRMGIG +S L+M+
Sbjct: 212 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRMGIGFFISALSMLV 391
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 392 AGLVEVKRRNTALSHGLADQPSAI 463
Score = 27.6 bits (54), Expect(3) = 9e-052
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2 / +2
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGS 808
ELK PI++ I +Q + + Q + +D+R+GS
Sbjct: 80 ELKSIMRTVPIFSCGIANQITNSQQHTFSVLQALSMDRRLGS 205
>gb|DR015090.1|DR015090 STRS1_1_A09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_1_A09_A034 5', mRNA sequence
Length = 810
Score = 122 bits (261), Expect(3) = 2e-051
Identities = 46/95 (48%), Positives = 65/95 (68%)
Frame = -2 / +3
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ T +LG+Y+S+
Sbjct: 525 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCTAALGHYLSA 704
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLI 280
I+T+V T + G P W+ DNLN GHL+ F+WL+
Sbjct: 705 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLL 809
Score = 92.3 bits (195), Expect(3) = 2e-051
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QRMGIG +S L+M+
Sbjct: 279 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRATKDNRGITMFQRMGIGFFISALSMLV 458
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 459 AGLVEVKRRNTALSHGLADQPSAI 530
Score = 27.6 bits (54), Expect(3) = 2e-051
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2 / +3
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGS 808
ELK PI++ I +Q + + Q + +D+R+GS
Sbjct: 147 ELKSIMRTVPIFSCGIANQMTNSQQHTFSVLQALSMDRRLGS 272
>gb|CF395939.1|CF395939 RTDS2_19_B12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_B12_A021 5', mRNA sequence
Length = 617
Score = 114 bits (244), Expect(4) = 2e-051
Identities = 46/82 (56%), Positives = 62/82 (75%)
Frame = -2 / +1
Query: 813 GSFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAM 634
G FNIP ASL F+ ++ ++WV LYD + P RKF G EKGFSELQRMGIG + ++ +M
Sbjct: 202 GHFNIPAASLYMFNSVTCMLWVLLYDFSIAPAMRKFKGNEKGFSELQRMGIGKLFAMFSM 381
Query: 633 VSAALVELKRLEIARSEGLIHE 568
VSAAL+E+KRL++ RS L+H+
Sbjct: 382 VSAALLEIKRLQVVRSHDLVHD 447
Score = 73.9 bits (155), Expect(3) = 2e-023
Identities = 35/78 (44%), Positives = 44/78 (56%)
Frame = +2 / -1
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLI 769
L R S AADTI M PIPIRC+SE PFS P+NFL +G ++S S T M +
Sbjct: 425 LTTCNRLISRSAADTIENMANNLPIPIRCNSENPFSFPLNFLIAGAMLKSYSRTQSMQVT 246
Query: 770 TSKVERDAGGMLKDPMRL 823
+ +A G+LK P L
Sbjct: 245 LLNMYSEAAGILK*PPML 192
Score = 61.6 bits (128), Expect(4) = 2e-051
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -2 / +2
Query: 528 QYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSA 427
QY L+G AE F GQ+EFFY++APDAMR+LCSA
Sbjct: 491 QYVLLGVAETFVLAGQLEFFYEEAPDAMRTLCSA 592
Score = 56.5 bits (117), Expect(4) = 2e-051
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = -2 / +1
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGSFNIPPAS 787
V E+K M PIWATAII+++ YAQ +MF+EQG ++ IG PA+
Sbjct: 64 VTQVEEVKILLQMVPIWATAIIYTSAYAQAHTMFVEQGKTMNNSIGGHFNIPAA 225
Score = 42.3 bits (86), Expect(3) = 2e-023
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +2 / -3
Query: 428 ALHKLLMASGA*S*KNST*PIQVNTSAAPTKKY 526
ALH++ MASGA S*KNS+ P N SA P Y
Sbjct: 591 ALHRVRMASGASS*KNSSCPANTNVSATPNNTY 493
Score = 30.9 bits (61), Expect(3) = 2e-023
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1 / -3
Query: 817 ALVKNHALLYEHGRVLGINSTEYDSSSPNGKHXXXXLQF 933
A+V AL +EHG LG+ Y SS P G H F
Sbjct: 195 AIVHCLALFHEHGVCLGVC*CIYYSSCPYGHHLKQYFHF 79
Score = 27.2 bits (53), Expect(4) = 2e-051
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 558 VPMSILWQIPQYFLV 514
VP+SILWQIP +V
Sbjct: 460 VPLSILWQIPPVRIV 504
>gb|DR023078.1|DR023078 STRS1_55_H02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_H02_A034 3', mRNA sequence
Length = 866
Score = 120 bits (256), Expect(3) = 2e-050
Identities = 45/96 (46%), Positives = 65/96 (67%)
Frame = -2 / +3
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ +LG+Y+S+
Sbjct: 393 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCQAALGHYLSA 572
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 573 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 680
Score = 90.9 bits (192), Expect(3) = 2e-050
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+
Sbjct: 147 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLV 326
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 327 AGLVEVKRRNTALSHGLADQPSAI 398
Score = 27.6 bits (54), Expect(3) = 2e-050
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2 / +3
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGS 808
ELK PI++ I +Q + + Q + +D+R+GS
Sbjct: 15 ELKSIMRTVPIFSCGIANQITNSQQHTFSVLQALSMDRRLGS 140
>gb|DR096391.1|DR096391 STRR1_27_E04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_E04_A033 5', mRNA sequence
Length = 797
Score = 120 bits (256), Expect(3) = 2e-050
Identities = 45/96 (46%), Positives = 65/96 (67%)
Frame = -2 / +2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ +LG+Y+S+
Sbjct: 455 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCQAALGHYLSA 634
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 635 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 742
Score = 90.9 bits (192), Expect(3) = 2e-050
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = -2 / +2
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+
Sbjct: 209 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLV 388
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 389 AGLVEVKRRNTALSHGLADQPSAI 460
Score = 27.6 bits (54), Expect(3) = 2e-050
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2 / +2
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGS 808
ELK PI++ I +Q + + Q + +D+R+GS
Sbjct: 77 ELKSIMRTVPIFSCGIANQITNSQQHTFSVLQALSMDRRLGS 202
>gb|CO366146.1|CO366146 RTK1_26_D08.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_26_D08_A029 3', mRNA sequence
Length = 820
Score = 122 bits (262), Expect(2) = 5e-049
Identities = 46/96 (47%), Positives = 66/96 (68%)
Frame = -2 / +1
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ T +LG+Y+S+
Sbjct: 337 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCTAALGHYLSA 516
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 517 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 624
Score = 92.7 bits (196), Expect(2) = 5e-049
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = -2 / +1
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QRMGIG +S L+M+
Sbjct: 91 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRMGIGFFISALSMLV 270
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 271 AGLVEVKRRNTALSHGLADQPSAI 342
>gb|DR015011.1|DR015011 STRS1_1_A09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_1_A09_A034 3', mRNA sequence
Length = 816
Score = 122 bits (262), Expect(2) = 5e-049
Identities = 46/96 (47%), Positives = 66/96 (68%)
Frame = -2 / +3
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ T +LG+Y+S+
Sbjct: 336 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCTAALGHYLSA 515
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 516 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 623
Score = 92.7 bits (196), Expect(2) = 5e-049
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QRMGIG +S L+M+
Sbjct: 90 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRMGIGFFISALSMLV 269
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 270 AGLVEVKRRNTALSHGLADQPSAI 341
>gb|DR015715.1|DR015715 STRS1_5_E06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_E06_A034 3', mRNA sequence
Length = 787
Score = 122 bits (262), Expect(2) = 5e-049
Identities = 46/96 (47%), Positives = 66/96 (68%)
Frame = -2 / +3
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ T +LG+Y+S+
Sbjct: 294 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCTAALGHYLSA 473
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 474 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 581
Score = 92.7 bits (196), Expect(2) = 5e-049
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QRMGIG +S L+M+
Sbjct: 48 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRMGIGFFISALSMLV 227
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 228 AGLVEVKRRNTALSHGLADQPSAI 299
>gb|DR096615.1|DR096615 STRR1_29_C05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_29_C05_A033 3', mRNA sequence
Length = 709
Score = 189 bits (407), Expect(2) = 9e-049
Identities = 77/166 (46%), Positives = 118/166 (71%)
Frame = -2 / +1
Query: 846 IEQGMVLDKRIGSFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRM 667
++QG +D+ + SF IP ASL+ ++ +++ VPLYD++ VPLAR+ TG E G + LQR+
Sbjct: 1 VQQGSTMDRTLKSFKIPAASLTAIPLVIMVILVPLYDQLFVPLARRITGHETGITHLQRV 180
Query: 666 GIGLVLSILAMVSAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCI 487
GIGL+LS LAM AA+VELKR +AR L+ +P+S+LW QY ++G A++FT
Sbjct: 181 GIGLLLSALAMAVAAVVELKRKAVARDHSLLDTDEPLPISVLWLGWQYLVLGIADMFTLA 360
Query: 486 GQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQ 349
G +EFFY QAP MRSL +AL+ ++S G Y+SS+++++V+ I+ +
Sbjct: 361 GLLEFFYSQAPSGMRSLSTALSWCSISFGYYLSSVLVSVVNKISAR 498
Score = 25.4 bits (49), Expect(2) = 9e-049
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 321 NLNEGHLDRFFWLIAGISFVD 259
NLN HL+ F+ L+ ++F++
Sbjct: 532 NLNRNHLELFYTLLCVLTFLN 594
>gb|DR101994.1|DR101994 STRR1_77_H02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_77_H02_A033 3', mRNA sequence
Length = 885
Score = 192 bits (413), Expect = 5e-048
Identities = 81/198 (40%), Positives = 127/198 (64%)
Frame = -2 / -2
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGSFNIPPASLSTFDV 769
V E K + PI+A+ I+ AQ + IEQ +D+++ F IP ASLS +
Sbjct: 752 VTQVEETKSVLRLLPIFASTIMTYCCLAQLQTFSIEQASTMDRKLKGFEIPAASLSAISL 573
Query: 768 ISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIAR 589
I +++ PLYD++ VP+AR+ TG E G ++LQR+GIGLV+S M AA+VE+KR +A
Sbjct: 572 IILLILAPLYDQVFVPIARRITGHETGITQLQRVGIGLVMSTAGMAVAAVVEVKRKTVAT 393
Query: 588 SEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITV 409
L+ +P+S+ W QYF +G +++FT +G +EFFY QAP MRSL ++L+ +
Sbjct: 392 HHLLLDTTKPLPISVFWLGWQYFFLGMSDIFTLVGLLEFFYSQAPSGMRSLSTSLSWCCL 213
Query: 408 SLGNYISSIILTLVSYIT 355
SLG Y+SS+++++V+ I+
Sbjct: 212 SLGYYLSSVLVSVVNRIS 159
>gb|CO163019.1|CO163019 FLD1_39_A05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_39_A05_A029 3', mRNA sequence
Length = 816
Score = 120 bits (256), Expect(2) = 1e-047
Identities = 45/96 (46%), Positives = 65/96 (67%)
Frame = -2 / +3
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ +LG+Y+S+
Sbjct: 336 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCQAALGHYLSA 515
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 516 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 623
Score = 90.9 bits (192), Expect(2) = 1e-047
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+
Sbjct: 90 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLV 269
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 270 AGLVEVKRRNTALSHGLADQPSAI 341
>gb|DR096311.1|DR096311 STRR1_27_E04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_E04_A033 3', mRNA sequence
Length = 768
Score = 120 bits (256), Expect(2) = 1e-047
Identities = 45/96 (46%), Positives = 65/96 (67%)
Frame = -2 / +1
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ +LG+Y+S+
Sbjct: 292 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCQAALGHYLSA 471
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 472 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 579
Score = 90.9 bits (192), Expect(2) = 1e-047
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = -2 / +1
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+
Sbjct: 46 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLV 225
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 226 AGLVEVKRRNTALSHGLADQPSAI 297
>gb|CF385877.1|CF385877 RTDR1_6_B08.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_6_B08_A015 5', mRNA
sequence
Length = 738
Score = 120 bits (256), Expect(2) = 1e-047
Identities = 45/96 (46%), Positives = 65/96 (67%)
Frame = -2 / -1
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ +LG+Y+S+
Sbjct: 462 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCQAALGHYLSA 283
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 282 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 175
Score = 90.9 bits (192), Expect(2) = 1e-047
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = -2 / -1
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+
Sbjct: 708 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLV 529
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 528 AGLVEVKRRNTALSHGLADQPSAI 457
>gb|DR025340.1|DR025340 STRS1_71_C02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_71_C02_A034 3', mRNA sequence
Length = 784
Score = 118 bits (253), Expect(2) = 3e-047
Identities = 45/96 (46%), Positives = 65/96 (67%)
Frame = -2 / +1
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFY Q P MRS A++ T +LG+Y+S+
Sbjct: 292 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYVQFPATMRSTAIAMSSCTAALGHYLSA 471
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 472 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 579
Score = 90.9 bits (192), Expect(2) = 3e-047
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = -2 / +1
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+
Sbjct: 46 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLV 225
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
A LVE+KR A S GL + +A+
Sbjct: 226 AGLVEVKRRNTALSHGLADQPSAI 297
>gb|CF471128.1|CF471128 RTDS1_16_B03.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_16_B03_A015 5', mRNA sequence
Length = 721
Score = 127 bits (271), Expect(2) = 5e-047
Identities = 45/100 (45%), Positives = 71/100 (71%)
Frame = -2 / +3
Query: 579 LIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLG 400
L H K+ +P+S+ W +PQY L G AE F IG +EFFYDQ+P++MRS +AL ++S G
Sbjct: 210 LDHPKSIIPISVFWLVPQYALHGIAEAFMSIGHLEFFYDQSPESMRSTATALFWTSISAG 389
Query: 399 NYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLI 280
+Y+S+++++ + +T++ G W+P NLN G L+ F+WLI
Sbjct: 390 SYLSTLLVSTIHKVTSRDGHHNWLPTNLNRGRLEYFYWLI 509
Score = 81.7 bits (172), Expect(2) = 5e-047
Identities = 31/76 (40%), Positives = 52/76 (68%)
Frame = -2 / +3
Query: 783 STFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKR 604
S F ++++++ + +YDR+L+P+AR FTGR +G S LQRMGIG +S+LA + + VE+KR
Sbjct: 3 SVFTILALLLTITVYDRLLMPIARHFTGRGRGISFLQRMGIGFFISVLATLVSGFVEVKR 182
Query: 603 LEIARSEGLIHEKAAV 556
+A G + ++
Sbjct: 183 KSVAAHYGFLDHPKSI 230
>gb|DR684588.1|DR684588 EST1074665 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAU41 3' end, mRNA sequence
Length = 791
Score = 103 bits (219), Expect(3) = 2e-046
Identities = 41/78 (52%), Positives = 59/78 (75%)
Frame = -2 / +1
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IPPASL +F +S+I+ +P+YDRI VP+AR TG E+G + LQR+G GL +S L+M+
Sbjct: 190 FEIPPASLQSFIDLSIILLLPVYDRIFVPIARNLTGNERGITLLQRIGTGLFISFLSMIV 369
Query: 627 AALVELKRLEIARSEGLI 574
AAL E++R++ A+ GLI
Sbjct: 370 AALTEIRRIKAAKDNGLI 423
Score = 83.5 bits (176), Expect(3) = 2e-046
Identities = 31/71 (43%), Positives = 52/71 (73%)
Frame = -2 / +1
Query: 567 KAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYIS 388
KA +P+SI +PQY L G A+VFT +G E+FYDQ PD+M+SL A+ L + +G+++S
Sbjct: 433 KATIPLSISLLLPQYILFGIADVFTMVGMQEYFYDQMPDSMKSLGVAVYLSVLGIGSFLS 612
Query: 387 SIILTLVSYIT 355
SI+++++ ++
Sbjct: 613 SILISVIEKLS 645
Score = 38.6 bits (78), Expect(3) = 2e-046
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 333 WIPDNLNEGHLDRFFWLIAGISFVD 259
W +NLN+ HLD F+W +A +S ++
Sbjct: 666 WFANNLNKAHLDYFYWFLASLSAIN 740
>gb|CO360855.1|CO360855 NDL2_1_C02.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_1_C02_A029 3', mRNA sequence
Length = 900
Score = 110 bits (235), Expect(2) = 5e-046
Identities = 45/105 (42%), Positives = 73/105 (69%)
Frame = -2 / +2
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 332 NSKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 511
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ S +LT+VS IT + G GWI +NLN LD ++ +A ++F++
Sbjct: 512 MGSFLLTIVSNITGRSGHKGWILNNLNASRLDYYYAFLAVLNFLN 646
Score = 95.0 bits (201), Expect(2) = 5e-046
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = -2 / +2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV
Sbjct: 92 SFEIPAASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMV 271
Query: 630 SAALVELKRLEIARSEGLIHEKAAV 556
A E+KRL++ R GL + A+
Sbjct: 272 IAIGTEIKRLDVIRDHGLQNNSKAI 346
>gb|CX649744.1|CX649744 COLD1_41_E10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_E10_A029 3', mRNA sequence
Length = 833
Score = 110 bits (235), Expect(2) = 5e-046
Identities = 45/105 (42%), Positives = 73/105 (69%)
Frame = -2 / -2
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 520 NSKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 341
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ S +LT+VS IT + G GWI +NLN LD ++ +A ++F++
Sbjct: 340 MGSFLLTIVSNITGRSGHKGWILNNLNASRLDYYYAFLAVLNFLN 206
Score = 95.0 bits (201), Expect(2) = 5e-046
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = -2 / -2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV
Sbjct: 760 SFEIPAASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMV 581
Query: 630 SAALVELKRLEIARSEGLIHEKAAV 556
A E+KRL++ R GL + A+
Sbjct: 580 IAIGTEIKRLDVIRDHGLQNNSKAI 506
>gb|DR019687.1|DR019687 STRS1_31_F01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_F01_A034 5', mRNA sequence
Length = 646
Score = 109 bits (233), Expect(2) = 5e-046
Identities = 45/105 (42%), Positives = 73/105 (69%)
Frame = -2 / +1
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 256 NRKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 435
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ S +LT+VS IT + G GWI +NLN LD ++ +A ++F++
Sbjct: 436 MGSFLLTIVSNITGRRGHKGWILNNLNASRLDYYYAFLAVLNFLN 570
Score = 95.9 bits (203), Expect(2) = 5e-046
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = -2 / +1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV
Sbjct: 16 SFEIPAASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMV 195
Query: 630 SAALVELKRLEIARSEGLIHEKAAV 556
A E+KRL++ R GL + + A+
Sbjct: 196 IAIGTEIKRLDVIRDHGLQNNRKAI 270
>gb|DR110348.1|DR110348 RTS1_10_H06.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_10_H06_A029 3', mRNA sequence
Length = 877
Score = 109 bits (233), Expect(2) = 9e-046
Identities = 45/105 (42%), Positives = 73/105 (69%)
Frame = -2 / +2
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 338 NSKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 517
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ S +LT+VS IT + G GWI +NLN LD ++ +A ++F++
Sbjct: 518 MGSFLLTIVSNITGRRGHKGWILNNLNASRLDYYYAFLAVLNFLN 652
Score = 95.0 bits (201), Expect(2) = 9e-046
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = -2 / +2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV
Sbjct: 98 SFEIPAASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMV 277
Query: 630 SAALVELKRLEIARSEGLIHEKAAV 556
A E+KRL++ R GL + A+
Sbjct: 278 IAIGTEIKRLDVIRDHGLQNNSKAI 352
>gb|DR019280.1|DR019280 STRS1_28_H08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_H08_A034 5', mRNA sequence
Length = 603
Score = 109 bits (233), Expect(2) = 9e-046
Identities = 45/105 (42%), Positives = 73/105 (69%)
Frame = -2 / +1
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 286 NSKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 465
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ S +LT+VS IT + G GWI +NLN LD ++ +A ++F++
Sbjct: 466 MGSFLLTIVSNITGRRGHEGWILNNLNASRLDYYYAFLAVLNFLN 600
Score = 95.0 bits (201), Expect(2) = 9e-046
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = -2 / +1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV
Sbjct: 46 SFEIPAASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMV 225
Query: 630 SAALVELKRLEIARSEGLIHEKAAV 556
A E+KRL++ R GL + A+
Sbjct: 226 IAIGTEIKRLDVIRDHGLQNNSKAI 300
>gb|DR080270.1|DR080270 RTFEPL1_21_B11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_B11_A029 5', mRNA sequence
Length = 844
Score = 101 bits (216), Expect(3) = 4e-044
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = -2 / +1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
+F++PPASL I +++ VPLYD +LVP R TG+E G S+LQR+GIGL +S +MV
Sbjct: 391 NFHVPPASLQAIPYIMLVVLVPLYDAVLVPFLRGMTGKETGISQLQRIGIGLFISTFSMV 570
Query: 630 SAALVELKRLEIARSEGLI 574
+AALVE KR ++ R GL+
Sbjct: 571 TAALVEAKRKQVGRDSGLM 627
Score = 78.5 bits (165), Expect(3) = 4e-044
Identities = 26/69 (37%), Positives = 49/69 (71%)
Frame = -2 / +1
Query: 570 EKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYI 391
+K ++P++I W PQ+ + G +E+FT +G +EFFY Q+P M+S+ +AL + S G Y+
Sbjct: 637 DKVSLPLTIFWIAPQFLVFGLSEMFTAVGLIEFFYSQSPAGMQSMLTALTYCSYSFGFYL 816
Query: 390 SSIILTLVS 364
S +++++V+
Sbjct: 817 SGVLVSIVN 843
Score = 37.3 bits (75), Expect(3) = 4e-044
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -2 / +1
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGSFN 802
V ++K + PI+A I+ + + AQ + ++QG +D R+G N
Sbjct: 247 VTQVEQVKVVIRVIPIFACTIVMNCILAQLQTFSVQQGSTMDNRLGRSN 393
>gb|DR025064.1|DR025064 STRS1_69_H05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_H05_A034 3', mRNA sequence
Length = 769
Score = 124 bits (265), Expect(2) = 6e-044
Identities = 47/100 (47%), Positives = 66/100 (66%)
Frame = -2 / +1
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS LW +PQY + G E F+ +GQ+EF Y Q PD MRS+ SAL +++ LGNY+SS+I
Sbjct: 199 IPMSALWLVPQYSVAGLVEAFSAVGQIEFLYGQFPDNMRSIASALFFVSMGLGNYLSSLI 378
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+++V T W+ NLN+ LD F+WLIAG V+
Sbjct: 379 VSIVHNTTGGPAHHNWLAQNLNKAKLDNFYWLIAGYGTVN 498
Score = 74.4 bits (156), Expect(2) = 6e-044
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = -2 / +1
Query: 753 WVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLI 574
++P+YDR ++P R+ T KG + LQRMG+GLVL+ILA+ AA VE KR +A S G +
Sbjct: 1 FLPIYDRFIMPFCRRMTKEGKGITLLQRMGVGLVLAILALALAAAVETKRRNVALSHGFM 180
Query: 573 HEKAAV 556
+ V
Sbjct: 181 EKPVDV 198
>gb|DR100575.1|DR100575 STRR1_65_E03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_65_E03_A033 3', mRNA sequence
Length = 885
Score = 109 bits (233), Expect(2) = 8e-044
Identities = 45/105 (42%), Positives = 73/105 (69%)
Frame = -2 / +3
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 231 NSKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 410
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ S +LT+VS IT + G GWI +NLN LD ++ +A ++F++
Sbjct: 411 MGSFLLTIVSNITGRRGHKGWILNNLNASRLDYYYAFLAVLNFLN 545
Score = 88.6 bits (187), Expect(2) = 8e-044
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = -2 / +3
Query: 798 PPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAAL 619
P AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV A
Sbjct: 3 PAASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMVIAIG 182
Query: 618 VELKRLEIARSEGLIHEKAAV 556
E+KRL++ R GL + A+
Sbjct: 183 TEIKRLDVIRDHGLQNNSKAI 245
>gb|DR010883.1|DR010883 HEAT1_2_A03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_A03_A029 3', mRNA sequence
Length = 657
Score = 120 bits (256), Expect(2) = 8e-044
Identities = 45/96 (46%), Positives = 65/96 (67%)
Frame = -2 / +2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F +G +EFFYDQ P MRS A++ +LG+Y+S+
Sbjct: 206 AIVPISALWLVPQFCIAGLAEAFHTVGNLEFFYDQFPATMRSTAIAMSSCQAALGHYLSA 385
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
I+T+V T + G P W+ DNLN GHL+ F+WL++
Sbjct: 386 TIVTVVHNTTGRDGRPDWLDDNLNRGHLEYFYWLLS 493
Score = 78.0 bits (164), Expect(2) = 8e-044
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -2 / +2
Query: 762 VIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSE 583
+I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+ A LVE+KR A S
Sbjct: 5 LIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLVAGLVEVKRRNTALSH 184
Query: 582 GLIHEKAAV 556
GL + +A+
Sbjct: 185 GLADQPSAI 211
>gb|CO201366.1|CO201366 RTCNT2_5_G02.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_5_G02_A029 3', mRNA sequence
Length = 798
Score = 102 bits (218), Expect(2) = 1e-043
Identities = 43/92 (46%), Positives = 64/92 (69%)
Frame = -2 / +3
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 519 NSKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 698
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLD 298
+ S +LT+VS IT + G GWI +NLN LD
Sbjct: 699 MGSFLLTIVSNITGRRGHKGWILNNLNASRLD 794
Score = 95.0 bits (201), Expect(2) = 1e-043
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = -2 / +3
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV
Sbjct: 279 SFEIPAASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMV 458
Query: 630 SAALVELKRLEIARSEGLIHEKAAV 556
A E+KRL++ R GL + A+
Sbjct: 459 IAIGTEIKRLDVIRDHGLQNNSKAI 533
>gb|DR164121.1|DR164121 RTFE1_47_A02.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_47_A02_A029 3', mRNA sequence
Length = 892
Score = 109 bits (233), Expect(2) = 5e-043
Identities = 45/105 (42%), Positives = 73/105 (69%)
Frame = -2 / +2
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+ KA VP SI IPQ+ L+G A+ IG++EFFYDQAP++M+SL ++L ++ +G++
Sbjct: 227 NSKAIVPRSIYTLIPQFALMGTADALLDIGKIEFFYDQAPESMQSLGTSLYTSSLGVGSF 406
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ S +LT+VS IT + G GWI +NLN LD ++ +A ++F++
Sbjct: 407 MGSFLLTIVSNITGRRGHKGWILNNLNASRLDYYYAFLAVLNFLN 541
Score = 85.8 bits (181), Expect(2) = 5e-043
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = -2 / +2
Query: 792 ASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVE 613
AS S +S+++ +YDRILVP+ R+FTG KG + LQRMG G+V+ IL MV A E
Sbjct: 5 ASTSAILTLSMLITTVVYDRILVPVFRRFTGNPKGITSLQRMGAGMVIQILVMVIAIGTE 184
Query: 612 LKRLEIARSEGLIHEKAAV 556
+KRL++ R GL + A+
Sbjct: 185 IKRLDVIRDHGLQNNSKAI 241
>gb|DR010959.1|DR010959 HEAT1_2_A03.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_A03_A029 5', mRNA sequence
Length = 552
Score = 105 bits (223), Expect(2) = 2e-042
Identities = 42/88 (47%), Positives = 57/88 (64%)
Frame = -2 / +2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A VP+S LW +PQ+ + G AE F G +EFFYDQ P MRS A++ +LG+Y+S+
Sbjct: 287 AIVPISALWLVPQFCITGLAEAFHTDGNLEFFYDQFPATMRSTAIAMSSCQAALGHYLSA 466
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHL 301
I+T+V T + G P W+ DNLN GHL
Sbjct: 467 TIVTVVHNTTGRDGRPDWLDDNLNRGHL 550
Score = 88.6 bits (187), Expect(2) = 2e-042
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = -2 / +2
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S + F ++ +I W+P YDR++VP+AR+ T +G + QR+GIG +S L+M+
Sbjct: 41 FQIPAGSFTVFSLLVLIAWLPFYDRVVVPMARRVTKDNRGITMFQRIGIGFFISALSMLI 220
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
+LVE+KR A S GL + +A+
Sbjct: 221 TSLVEVKRRNNALSHGLADQPSAI 292
>gb|DR023824.1|DR023824 STRS1_60_G02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_60_G02_A034 3', mRNA sequence
Length = 727
Score = 111 bits (237), Expect(2) = 5e-042
Identities = 41/94 (43%), Positives = 62/94 (65%)
Frame = -2 / +3
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+P+S+ W +PQ+ L+G A+VFT +G E+FYDQ PD MRSL A L V +G+++S+++
Sbjct: 210 LPISVFWLVPQFVLLGIADVFTLVGLQEYFYDQGPDGMRSLGIAFYLSVVGVGSFLSTLL 389
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
+T+V +T GG W N H D F+WL+A
Sbjct: 390 ITIVEKVTVIGGHESWFTTNPKGLHWDYFYWLLA 491
Score = 80.8 bits (170), Expect(2) = 5e-042
Identities = 32/58 (55%), Positives = 48/58 (82%)
Frame = -2 / +3
Query: 762 VIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIAR 589
+I++ +YDR LVP+A+K TG E+G + LQR+GIG+ +SIL MVSAALVE +R+++A+
Sbjct: 3 MIIFAAIYDRFLVPVAKKITGHERGITLLQRIGIGMFVSILCMVSAALVETRRVDMAK 176
>gb|DR023208.1|DR023208 STRS1_56_D11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_D11_A034 3', mRNA sequence
Length = 735
Score = 108 bits (231), Expect(2) = 3e-041
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = -2 / +1
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+P+S+ W +PQ+ L+G A+VFT +G E+FYDQ PD MRSL A V +G++ S+++
Sbjct: 208 LPISVFWLVPQFVLLGIADVFTLVGLQEYFYDQGPDGMRSLGIAFYFSVVGVGSFFSTLL 387
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
+T+V +T GG W N H D F+WL+A
Sbjct: 388 ITIVEKVTVIGGHESWFTTNPKGLHWDYFYWLLA 489
Score = 80.8 bits (170), Expect(2) = 3e-041
Identities = 32/58 (55%), Positives = 48/58 (82%)
Frame = -2 / +1
Query: 762 VIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIAR 589
+I++ +YDR LVP+A+K TG E+G + LQR+GIG+ +SIL MVSAALVE +R+++A+
Sbjct: 1 MIIFAAIYDRFLVPVAKKITGHERGITLLQRIGIGMFVSILCMVSAALVETRRVDMAK 174
>gb|CF388427.1|CF388427 RTDR2_3_D06.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_3_D06_A021 3', mRNA
sequence
Length = 684
Score = 163 bits (351), Expect(2) = 4e-041
Identities = 67/141 (47%), Positives = 102/141 (72%)
Frame = -2 / +1
Query: 771 VISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIA 592
++ +++ VPLYD++ VPLAR+ TG E G + LQR+GIGL+LS LAM AA+VELKR +A
Sbjct: 7 LVIMVILVPLYDQLFVPLARRITGHETGITHLQRVGIGLLLSALAMAVAAVVELKRKAVA 186
Query: 591 RSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALIT 412
R L+ +P+S+LW QY ++G A++FT G +EFFY QAP MRSL +AL+ +
Sbjct: 187 RDHSLLDTDEPLPISVLWLGWQYLVLGIADMFTLAGLLEFFYSQAPSGMRSLSTALSWCS 366
Query: 411 VSLGNYISSIILTLVSYITTQ 349
+S G Y+SS+++++V+ I+ +
Sbjct: 367 ISFGYYLSSVLVSVVNKISAR 429
Score = 25.4 bits (49), Expect(2) = 4e-041
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 321 NLNEGHLDRFFWLIAGISFVD 259
NLN HL+ F+ L+ ++F++
Sbjct: 463 NLNRNHLELFYTLLCVLTFLN 525
>gb|CO201772.1|CO201772 RTCNT2_8_C01.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_C01_A029 3', mRNA sequence
Length = 722
Score = 101 bits (216), Expect(3) = 6e-041
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = -2 / -1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
+F++PPASL I +++ VPLYD +LVP R TG+E G S+LQR+GIGL +S +MV
Sbjct: 419 NFHVPPASLQAIPYIMLVVLVPLYDAVLVPFLRGMTGKETGISQLQRIGIGLFISTFSMV 240
Query: 630 SAALVELKRLEIARSEGLI 574
+AALVE KR ++ R GL+
Sbjct: 239 TAALVEAKRKQVGRDSGLM 183
Score = 67.5 bits (141), Expect(3) = 6e-041
Identities = 23/57 (40%), Positives = 39/57 (68%)
Frame = -2 / -1
Query: 570 EKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLG 400
+K ++P++I W PQ+ + G +E+FT +G +EFFY Q+P M+S+ +AL + S G
Sbjct: 173 DKVSLPLTIFWIAPQFLVFGLSEMFTAVGLIEFFYSQSPAGMQSMLTALTYCSYSFG 3
Score = 37.3 bits (75), Expect(3) = 6e-041
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -2 / -1
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGSFN 802
V ++K + PI+A I+ + + AQ + ++QG +D R+G N
Sbjct: 563 VTQVEQVKVVIRVIPIFACTIVMNCILAQLQTFSVQQGSTMDNRLGRSN 417
>gb|AI812586.1|AI812586 13F10 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 634
Score = 168 bits (361), Expect = 7e-041
Identities = 65/104 (62%), Positives = 87/104 (83%)
Frame = -2 / +3
Query: 570 EKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYI 391
E + MSI +IPQYFLVGA+EVFT +GQ+EF YDQ+PDAMRSLCSAL ++T +LGNY+
Sbjct: 27 EGTPIAMSIFPEIPQYFLVGASEVFTFVGQLEFLYDQSPDAMRSLCSALYILTTALGNYL 206
Query: 390 SSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
SS+I+T+V + TT+GG+ GWIPDNLNEGHLD +F ++A +S ++
Sbjct: 207 SSLIVTVVMFATTKGGNVGWIPDNLNEGHLDYYFSVLASLSLLN 338
Score = 105 bits (225), Expect = 4e-022
Identities = 55/96 (57%), Positives = 65/96 (67%)
Frame = +2 / -1
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLL 445
+L A +K SRWPSF+LSGIHP PP VV T V++ L *FP+ V SALHKL
Sbjct: 331 RLSEANTEK**SRWPSFKLSGIHPTFPPFVVANITTVTIRLLK*FPNAVVRI*SALHKLR 152
Query: 446 MASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLI 553
+ASG S KNS+ P +VNTS APTKKY GI +MLI
Sbjct: 151 IASGDWSYKNSSCPTKVNTSDAPTKKYWGISGKMLI 44
>gb|DT632273.1|DT632273 EST1147204 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFI29 3' end, mRNA sequence
Length = 665
Score = 103 bits (219), Expect(2) = 2e-040
Identities = 41/78 (52%), Positives = 59/78 (75%)
Frame = -2 / +1
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IPPASL +F +S+I+ +P+YDRI VP+AR TG E+G + LQR+G GL +S L+M+
Sbjct: 190 FEIPPASLQSFIDLSIILLLPVYDRIFVPIARNLTGNERGITLLQRIGTGLFISFLSMIV 369
Query: 627 AALVELKRLEIARSEGLI 574
AAL E++R++ A+ GLI
Sbjct: 370 AALTEIRRIKAAKDNGLI 423
Score = 83.5 bits (176), Expect(2) = 2e-040
Identities = 31/71 (43%), Positives = 52/71 (73%)
Frame = -2 / +1
Query: 567 KAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYIS 388
KA +P+SI +PQY L G A+VFT +G E+FYDQ PD+M+SL A+ L + +G+++S
Sbjct: 433 KATIPLSISLLLPQYILFGIADVFTMVGMQEYFYDQMPDSMKSLGVAVYLSVLGIGSFLS 612
Query: 387 SIILTLVSYIT 355
SI+++++ ++
Sbjct: 613 SILISVIEKLS 645
>gb|DN609073.1|DN609073 EST962123 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAA819, mRNA sequence
Length = 373
Score = 165 bits (355), Expect = 5e-040
Identities = 64/103 (62%), Positives = 86/103 (83%)
Frame = -2 / +3
Query: 522 FLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGG 343
FLVGA+EVFT +GQ+EFFYDQ+PDAMRSLCSAL+L+T +LGNY+SS+I+T+V + TT+GG
Sbjct: 3 FLVGASEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSLIVTVVMFATTKGG 182
Query: 342 DPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
+ GWIPDNLNEGHLD +FW++A +S ++ + CA + KK
Sbjct: 183 NVGWIPDNLNEGHLDYYFWVLASLSLLNLLVYVSCAHRYKYKK 311
>gb|DR387526.1|DR387526 RTHG1_22_H10.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_22_H10_A029 3', mRNA sequence
Length = 653
Score = 159 bits (342), Expect(2) = 7e-040
Identities = 66/133 (49%), Positives = 96/133 (72%)
Frame = -2 / +1
Query: 747 PLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLIHE 568
PLYD++ VPLAR+ TG E G + LQR+GIGL+LS LAM AA+VELKR +AR L+
Sbjct: 1 PLYDQLFVPLARRITGHETGITHLQRVGIGLLLSALAMAVAAVVELKRKAVARDHSLLDT 180
Query: 567 KAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYIS 388
+P+S+LW QY ++G A++FT G +EFFY QAP MRSL +AL+ ++S G Y+S
Sbjct: 181 DEPLPISVLWLGWQYLVLGIADMFTLAGLLEFFYSQAPSGMRSLSTALSWCSISFGYYLS 360
Query: 387 SIILTLVSYITTQ 349
S+++++V+ I+ +
Sbjct: 361 SVLVSVVNKISAR 399
Score = 25.4 bits (49), Expect(2) = 7e-040
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 321 NLNEGHLDRFFWLIAGISFVD 259
NLN HL+ F+ L+ ++F++
Sbjct: 433 NLNRNHLELFYTLLCVLTFLN 495
>gb|DT627635.1|DT627635 EST1156384 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMCO85 5' end, mRNA sequence
Length = 373
Score = 163 bits (351), Expect = 2e-039
Identities = 63/103 (61%), Positives = 85/103 (82%)
Frame = -2 / -3
Query: 522 FLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGG 343
FLVGA+EVFT +GQ+EFFYDQ+PDAMRSLCSAL+ +T +LGNY+SS+I+T+V + TT+GG
Sbjct: 371 FLVGASEVFTFVGQLEFFYDQSPDAMRSLCSALSFLTTALGNYLSSLIVTVVMFATTKGG 192
Query: 342 DPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
+ GWIPDNLNEGHLD +FW++A +S ++ + CA + KK
Sbjct: 191 NVGWIPDNLNEGHLDYYFWVLASLSLLNLLVYVSCAHRYKYKK 63
>gb|DR025148.1|DR025148 STRS1_69_H05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_H05_A034 5', mRNA sequence
Length = 645
Score = 94.5 bits (200), Expect(2) = 3e-039
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = -2 / +3
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS LW +PQY + G E F+ +GQ+EF Y Q PD MRS+ SAL +++ LGNY+SS+I
Sbjct: 411 IPMSALWLVPQYSVAGLVEAFSAVGQIEFLYGQFPDNMRSIASALFFVSMGLGNYLSSLI 590
Query: 378 LTLVSYITTQGGDPGWI 328
+++V T W+
Sbjct: 591 VSIVHNTTGGPAHHNWL 641
Score = 88.1 bits (186), Expect(2) = 3e-039
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP S F ++++ +++P+YDR ++P R+ T KG + LQRMG+GLVL+ILA+
Sbjct: 159 FQIPAGSFGIFTMLALALFLPIYDRFIMPFCRRMTKEGKGITLLQRMGVGLVLAILALAL 338
Query: 627 AALVELKRLEIARSEGLIHEKAAV 556
AA VE KR +A S G + + V
Sbjct: 339 AAAVETKRRNVALSHGFMEKPVDV 410
>gb|DR088980.1|DR088980 RTAL1_5_G08.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_5_G08_A029 5', mRNA sequence
Length = 787
Score = 122 bits (261), Expect(2) = 6e-039
Identities = 44/99 (44%), Positives = 68/99 (68%)
Frame = -2 / -2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A +PM+I W +PQY L G +EVF +G E+FYDQ P+ MRSL A+ L + +G+++S
Sbjct: 516 ATIPMTIFWLLPQYILYGISEVFAMVGMQEYFYDQMPNRMRSLGIAVFLSVLGIGSFLSG 337
Query: 384 IILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGIS 268
I++++V I+++ + W DNLN HLD F+WL+A +S
Sbjct: 336 IVISIVDEISSRSKEGSWFQDNLNTAHLDYFYWLLAALS 220
Score = 59.3 bits (123), Expect(2) = 6e-039
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -2 / -2
Query: 705 TGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLI 574
+G E G + LQR+G G+ +S+LAMV AAL ELKRL++A+ GL+
Sbjct: 660 SGLEHGITVLQRVGFGIFVSVLAMVVAALTELKRLKVAKDNGLV 529
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 554,671,745
Number of Sequences: 355925
Number of extensions: 8626885
Number of successful extensions: 40238
Number of sequences better than 1.0e-020: 120
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 15586460520
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)