TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750995.2.1
(729 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT633202.1|DT633202 EST1148133 Normalized pine embryo li... 348 8e-095
gb|BX250886.1|BX250886 BX250886 Pinus pinaster differenciat... 344 2e-093
gb|CF668609.1|CF668609 RTCNT1_37_C09.g1_A029 Root control P... 344 2e-093
gb|CX712437.1|CX712437 RTPQ1_2_B10.g2_A032 Roots treated wi... 344 2e-093
gb|DR686259.1|DR686259 EST1076337 Normalized pine embryo li... 338 9e-092
gb|CO414354.1|CO414354 EST844739 Sequencing ESTs from loblo... 337 2e-091
gb|CO414530.1|CO414530 EST844915 Sequencing ESTs from loblo... 337 2e-091
gb|CV145560.1|CV145560 EST856769 Sequencing ESTs from loblo... 337 2e-091
gb|CV146456.1|CV146456 EST857665 Sequencing ESTs from loblo... 337 2e-091
gb|DN448092.1|DN448092 EST943891 Sequencing ESTs from loblo... 337 2e-091
gb|DN454648.1|DN454648 EST950447 Sequencing ESTs from loblo... 337 2e-091
gb|DN455552.1|DN455552 EST951351 Sequencing ESTs from loblo... 337 2e-091
gb|DT631127.1|DT631127 EST1146058 Normalized pine embryo li... 210 2e-090
gb|DR682507.1|DR682507 EST1072582 Normalized pine embryo li... 210 2e-090
gb|DR180298.1|DR180298 RTMNUT1_27_E10.g1_A029 Roots minus m... 290 2e-087
gb|BF169605.1|BF169605 NXCI_125_B12_F NXCI (Nsf Xylem Compr... 321 1e-086
gb|BG040464.1|BG040464 NXSI_108_E06_F NXSI (Nsf Xylem Side ... 292 8e-078
gb|BX255050.1|BX255050 BX255050 Pinus pinaster differenciat... 273 3e-072
gb|AW985236.1|AW985236 NXNV_132_G09_F Nsf Xylem Normal wood... 271 1e-071
gb|CV145879.1|CV145879 EST857088 Sequencing ESTs from loblo... 263 3e-069
gb|BQ702114.1|BQ702114 NXSI_125_D01_F NXSI (Nsf Xylem Side ... 202 3e-069
gb|BX251300.1|BX251300 BX251300 Pinus pinaster differenciat... 260 2e-068
gb|CF391377.1|CF391377 RTDR3_1_F02.g1_A022 Loblolly pine ro... 258 9e-068
gb|AW010207.1|AW010207 ST03D02 Pine TriplEx shoot tip libra... 256 4e-067
gb|BQ696241.1|BQ696241 NXPV_037_A06_F NXPV (Nsf Xylem Plani... 252 5e-066
gb|BE451961.1|BE451961 NXCI_006_G11_F NXCI (Nsf Xylem Compr... 250 3e-065
gb|BG318777.1|BG318777 NXPV_016_G04_F NXPV (Nsf Xylem Plani... 248 1e-064
gb|BF221092.1|BF221092 NXCI_163_C10_F NXCI (Nsf Xylem Compr... 246 3e-064
gb|BG832837.1|BG832837 NXPV_081_C11_F NXPV (Nsf Xylem Plani... 242 5e-063
gb|DR013127.1|DR013127 HEAT1_17_E04.b1_A029 Root at 37 C fo... 233 2e-060
gb|BQ698027.1|BQ698027 NXPV_063_F12_F NXPV (Nsf Xylem Plani... 227 1e-058
gb|BG039542.1|BG039542 NXSI_100_B12_F NXSI (Nsf Xylem Side ... 215 7e-055
gb|BF169499.1|BF169499 NXCI_120_B12_F NXCI (Nsf Xylem Compr... 189 4e-047
gb|BG040630.1|BG040630 NXSI_113_C12_F NXSI (Nsf Xylem Side ... 184 1e-045
gb|CN785813.1|CN785813 EST784504 Sequencing ESTs from loblo... 177 1e-043
gb|BF609646.1|BF609646 NXSI_047_F05_F NXSI (Nsf Xylem Side ... 163 2e-039
gb|BX255245.1|BX255245 BX255245 Pinus pinaster differenciat... 160 1e-038
gb|AW784126.1|AW784126 NXNV_103_D08_F Nsf Xylem Normal wood... 160 2e-038
gb|BX253218.1|BX253218 BX253218 Pinus pinaster differenciat... 151 1e-035
gb|BQ696209.1|BQ696209 NXPV_039_F04_F NXPV (Nsf Xylem Plani... 110 1e-033
gb|BE607184.1|BE607184 NXCI_038_A08_F NXCI (Nsf Xylem Compr... 133 3e-030
gb|BE123762.1|BE123762 NXNV_156_A02_F Nsf Xylem Normal wood... 129 3e-029
gb|AW290177.1|AW290177 NXNV015C07F Nsf Xylem Normal wood Ve... 128 5e-029
gb|CD026846.1|CD026846 NXNV015C07 Nsf Xylem Normal wood Ver... 128 5e-029
gb|BE451977.1|BE451977 NXCI_007_A01_F NXCI (Nsf Xylem Compr... 127 1e-028
gb|BF609500.1|BF609500 NXSI_043_D01_F NXSI (Nsf Xylem Side ... 122 3e-027
gb|BF221303.1|BF221303 NXCI_157_B06_F NXCI (Nsf Xylem Compr... 116 2e-025
gb|BF221328.1|BF221328 NXCI_157_D10_F NXCI (Nsf Xylem Compr... 116 4e-025
gb|AW736991.1|AW736991 NXNV_082_G09_F Nsf Xylem Normal wood... 113 2e-024
gb|CD023213.1|CD023213 NXPV_103_C04_F NXPV (Nsf Xylem Plani... 113 2e-024
gb|BE496330.1|BE496330 NXCI_022_G10_F NXCI (Nsf Xylem Compr... 112 3e-024
gb|BF516781.1|BF516781 NXSI_003_C07_F NXSI (Nsf Xylem Side ... 108 8e-023
>gb|DT633202.1|DT633202 EST1148133 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFS42 3' end, mRNA sequence
Length = 858
Score = 348 bits (755), Expect = 8e-095
Identities = 150/177 (84%), Positives = 155/177 (87%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICCIGAGYVGGPTMAVIALKCP IEVVVVDIS PRI+AWNSD LPIYEPGLD+VVK
Sbjct: 182 KMVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISNPRIDAWNSDQLPIYEPGLDEVVK 361
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CR +NLFFS+DVEKHVAEADI+FVSVNTPTKTRGLG GKAADLTYWESAARMIADVSKS
Sbjct: 362 ACREKNLFFSSDVEKHVAEADIVFVSVNTPTKTRGLGHGKAADLTYWESAARMIADVSKS 541
Query: 558 DKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
DKIVVEKSTVPVKTAEAIEKILTH SKGINYQILS A DL PD LI
Sbjct: 542 DKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAINDLLKPDRVLI 712
Score = 286 bits (618), Expect = 2e-076
Identities = 136/177 (76%), Positives = 140/177 (79%)
Frame = -3 / -1
Query: 727 MXXXSGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLE 548
M SG RS A ERI *L+PLL WVKIFSIASAVLTGTVDFSTTILSDLE
Sbjct: 711 MSTRSGFNRSFIAVPSARNSGLERI**LIPLLLWVKIFSIASAVLTGTVDFSTTILSDLE 532
Query: 547 TSAIIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTT 368
TSAII AALSQ*VRSAA P P P V VGVFTET MSASATCFSTS LKKRF L TT
Sbjct: 531 TSAIILAALSQ*VRSAAFPWPRPLVFVGVFTETNTMSASATCFSTSELKKRFFSLQALTT 352
Query: 367 SSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTIL 197
SSRPGS*IG SLF AS+RGLEMSTTTTSM+GH RA+TAMVGPPT PAPMQQIFTIL
Sbjct: 351 SSRPGS*IGS*SLFHASIRGLEMSTTTTSMAGHFRAITAMVGPPTYPAPMQQIFTIL 181
Score = 144 bits (308), Expect = 9e-034
Identities = 68/155 (43%), Positives = 94/155 (60%)
Frame = +2 / +1
Query: 197 QDGEDLLHRCWLCRWPNHGCHCPQVPRH*GCRC*HLQAPH*GLEQRHPPDLRARPR*CCE 376
QDGEDLLHR +C WP+HGC ++PRH* *HL + +* +EQR DL P * C+
Sbjct: 181 QDGEDLLHRSRVCGWPHHGCDSSEMPRH*SRSS*HL*SSN*CVEQRSASDL*TWP**SCQ 360
Query: 377 AVQGQEPLLQH*C*EARR*G*HHLRLGEHPHQDPWAWSWQGCRPHLLGERCSYDRRCLQV 556
++QG++PL Q C EA * H +R +HPH+D W+ CR LLG+R D RC +
Sbjct: 361 SLQGKKPLFQFRCREACC*SRHCVRFSKHPHEDKRPRPWKSCRSDLLGKRG*NDSRCF*I 540
Query: 557 *QDRCREVHRPCQDR*GY*EDLDPXQQGHQLPDPF 661
Q+ E++ C + G *+D +P QQG+ L + F
Sbjct: 541 GQNCR*EINSSC*NSRGN*KDFNPQQQGN*LSNSF 645
>gb|BX250886.1|BX250886 BX250886 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP042E05 similar to UDP GLUCOSE 6
DEHYDROGENASE, mRNA sequence
Length = 676
Score = 344 bits (745), Expect = 2e-093
Identities = 149/177 (84%), Positives = 157/177 (88%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 131 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 310
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CRG+NLFFS+DVEKHV EADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS
Sbjct: 311 GCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 490
Query: 558 DKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
DKIVVEKSTVPVKTAEAIEKILTH +KGIN+QILS A +DL PD LI
Sbjct: 491 DKIVVEKSTVPVKTAEAIEKILTHNTKGINFQILSXPEFLAEGTAXQDLLNPDRVLI 661
Score = 263 bits (569), Expect = 9e-070
Identities = 125/174 (71%), Positives = 137/174 (78%)
Frame = -3 / -2
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RS A ERIW L+PL+ V+IFSIASAV TGTVDFSTTILSD ETSAI
Sbjct: 648 SGFRRS*XAVPSARNSGXERIWKLIPLVLCVRIFSIASAVFTGTVDFSTTILSDFETSAI 469
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAALSQ*VRSAA PAP PRVLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRP
Sbjct: 468 IRAALSQ*VRSAAFPAPRPRVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRP 289
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS*IG SLF A++ E+STTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 288 GS*IGSWSLFHAAILADEISTTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 127
>gb|CF668609.1|CF668609 RTCNT1_37_C09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_37_C09_A029 5', mRNA sequence
Length = 746
Score = 344 bits (745), Expect = 2e-093
Identities = 147/177 (83%), Positives = 155/177 (87%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 98 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 277
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CRG+NLFFS+DVEKHV EADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS
Sbjct: 278 GCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 457
Query: 558 DKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
DKIVVEKSTVPVKTAEAIEKILTH +KGIN+QILS A +DL PD LI
Sbjct: 458 DKIVVEKSTVPVKTAEAIEKILTHNTKGINFQILSNPEFLAEGTAIQDLLNPDRVLI 628
Score = 261 bits (564), Expect = 4e-069
Identities = 122/174 (70%), Positives = 134/174 (77%)
Frame = -3 / -3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RS A ERIW L+PL+ V+IFSIASAV TGTVDFSTTILSD ETSAI
Sbjct: 615 SGFRRS*IAVPSARNSGFERIWKLIPLVLCVRIFSIASAVFTGTVDFSTTILSDFETSAI 436
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAALSQ VRSAA PAP PRVLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRP
Sbjct: 435 IRAALSQYVRSAAFPAPRPRVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRP 256
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS*IG SLF A++ E+STTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 255 GS*IGSWSLFHAAILADEISTTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 94
>gb|CX712437.1|CX712437 RTPQ1_2_B10.g2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_2_B10_A032 5', mRNA sequence
Length = 859
Score = 344 bits (745), Expect = 2e-093
Identities = 147/177 (83%), Positives = 155/177 (87%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 103 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 282
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CRG+NLFFS+DVEKHV EADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS
Sbjct: 283 GCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 462
Query: 558 DKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
DKIVVEKSTVPVKTAEAIEKILTH +KGIN+QILS A +DL PD LI
Sbjct: 463 DKIVVEKSTVPVKTAEAIEKILTHNTKGINFQILSNPEFLAEGTAIQDLLNPDRVLI 633
Score = 261 bits (564), Expect = 4e-069
Identities = 122/174 (70%), Positives = 134/174 (77%)
Frame = -3 / -3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RS A ERIW L+PL+ V+IFSIASAV TGTVDFSTTILSD ETSAI
Sbjct: 620 SGFRRS*IAVPSARNSGFERIWKLIPLVLCVRIFSIASAVFTGTVDFSTTILSDFETSAI 441
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAALSQ VRSAA PAP PRVLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRP
Sbjct: 440 IRAALSQYVRSAAFPAPRPRVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRP 261
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS*IG SLF A++ E+STTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 260 GS*IGSWSLFHAAILADEISTTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 99
>gb|DR686259.1|DR686259 EST1076337 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABE11 3' end, mRNA sequence
Length = 585
Score = 338 bits (733), Expect = 9e-092
Identities = 143/155 (92%), Positives = 148/155 (95%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICCIGAGYVGGPTMAVIALKCP IEVVVVDIS PRI+AWNSD LPIYEPGLD+VVK
Sbjct: 116 KMVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISNPRIDAWNSDQLPIYEPGLDEVVK 295
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CR +NLFFS+DVEKHVAEADI+FVSVNTPTKTRGLG GKAADLTYWESAARMIADVSKS
Sbjct: 296 ACREKNLFFSSDVEKHVAEADIVFVSVNTPTKTRGLGHGKAADLTYWESAARMIADVSKS 475
Query: 558 DKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILS 662
DKIVVEKSTVPVKTAEAIEKILTH SKGINYQILS
Sbjct: 476 DKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILS 580
Score = 279 bits (603), Expect = 2e-074
Identities = 130/155 (83%), Positives = 134/155 (86%)
Frame = -3 / -1
Query: 661 ERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPAPS 482
ERI *L+PLL WVKIFSIASAVLTGTVDFSTTILSDLETSAII AALSQ*VRSAA P P
Sbjct: 579 ERI**LIPLLLWVKIFSIASAVLTGTVDFSTTILSDLETSAIILAALSQ*VRSAAFPWPR 400
Query: 481 PRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLE 302
P V VGVFTET MSASATCFSTS LKKRF L TTSSRPGS*IG SLF AS+RGLE
Sbjct: 399 PLVFVGVFTETNTMSASATCFSTSELKKRFFSLQALTTSSRPGS*IGS*SLFHASIRGLE 220
Query: 301 MSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTIL 197
MSTTTTSM+GH RA+TAMVGPPT PAPMQQIFTIL
Sbjct: 219 MSTTTTSMAGHFRAITAMVGPPTYPAPMQQIFTIL 115
Score = 144 bits (308), Expect = 9e-034
Identities = 68/155 (43%), Positives = 94/155 (60%)
Frame = +2 / +1
Query: 197 QDGEDLLHRCWLCRWPNHGCHCPQVPRH*GCRC*HLQAPH*GLEQRHPPDLRARPR*CCE 376
QDGEDLLHR +C WP+HGC ++PRH* *HL + +* +EQR DL P * C+
Sbjct: 115 QDGEDLLHRSRVCGWPHHGCDSSEMPRH*SRSS*HL*SSN*CVEQRSASDL*TWP**SCQ 294
Query: 377 AVQGQEPLLQH*C*EARR*G*HHLRLGEHPHQDPWAWSWQGCRPHLLGERCSYDRRCLQV 556
++QG++PL Q C EA * H +R +HPH+D W+ CR LLG+R D RC +
Sbjct: 295 SLQGKKPLFQFRCREACC*SRHCVRFSKHPHEDKRPRPWKSCRSDLLGKRG*NDSRCF*I 474
Query: 557 *QDRCREVHRPCQDR*GY*EDLDPXQQGHQLPDPF 661
Q+ E++ C + G *+D +P QQG+ L + F
Sbjct: 475 GQNCR*EINSSC*NSRGN*KDFNPQQQGN*LSNSF 579
>gb|CO414354.1|CO414354 EST844739 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMN23 5' end, mRNA sequence
Length = 769
Score = 337 bits (730), Expect = 2e-091
Identities = 143/176 (81%), Positives = 156/176 (88%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 53 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 232
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 233 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 412
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
KIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL PD LI
Sbjct: 413 KIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 580
Score = 267 bits (577), Expect = 7e-071
Identities = 126/174 (72%), Positives = 138/174 (79%)
Frame = -3 / -2
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 567 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 388
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 387 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 208
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 207 GSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 46
>gb|CO414530.1|CO414530 EST844915 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMP65 5' end, mRNA sequence
Length = 769
Score = 337 bits (730), Expect = 2e-091
Identities = 143/176 (81%), Positives = 156/176 (88%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 53 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 232
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 233 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 412
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
KIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL PD LI
Sbjct: 413 KIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 580
Score = 267 bits (577), Expect = 7e-071
Identities = 126/174 (72%), Positives = 138/174 (79%)
Frame = -3 / -2
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 567 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 388
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 387 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 208
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 207 GSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 46
>gb|CV145560.1|CV145560 EST856769 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDK03 5' end, mRNA sequence
Length = 837
Score = 337 bits (730), Expect = 2e-091
Identities = 143/176 (81%), Positives = 156/176 (88%)
Frame = +3 / +1
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 52 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 231
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 232 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 411
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
KIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL PD LI
Sbjct: 412 KIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 579
Score = 267 bits (577), Expect = 7e-071
Identities = 126/174 (72%), Positives = 138/174 (79%)
Frame = -3 / -2
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 566 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 387
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 386 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 207
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 206 GSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 45
>gb|CV146456.1|CV146456 EST857665 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDW57 5' end, mRNA sequence
Length = 857
Score = 337 bits (730), Expect = 2e-091
Identities = 143/176 (81%), Positives = 156/176 (88%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 77 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 256
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 257 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 436
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
KIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL PD LI
Sbjct: 437 KIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 604
Score = 267 bits (577), Expect = 7e-071
Identities = 126/174 (72%), Positives = 138/174 (79%)
Frame = -3 / -3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 591 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 412
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 411 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 232
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 231 GSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 70
>gb|DN448092.1|DN448092 EST943891 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC087 5' end, mRNA sequence
Length = 939
Score = 337 bits (730), Expect = 2e-091
Identities = 143/176 (81%), Positives = 156/176 (88%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 53 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 232
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 233 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 412
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
KIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL PD LI
Sbjct: 413 KIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 580
Score = 267 bits (577), Expect = 7e-071
Identities = 126/174 (72%), Positives = 138/174 (79%)
Frame = -3 / -1
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 567 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 388
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 387 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 208
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 207 GSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 46
>gb|DN454648.1|DN454648 EST950447 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIG582 5' end, mRNA sequence
Length = 896
Score = 337 bits (730), Expect = 2e-091
Identities = 143/176 (81%), Positives = 156/176 (88%)
Frame = +3 / +1
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 55 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 234
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 235 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 414
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
KIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL PD LI
Sbjct: 415 KIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 582
Score = 267 bits (577), Expect = 7e-071
Identities = 126/174 (72%), Positives = 138/174 (79%)
Frame = -3 / -1
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 569 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 390
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 389 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 210
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 209 GSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 48
>gb|DN455552.1|DN455552 EST951351 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGF47 5' end, mRNA sequence
Length = 939
Score = 337 bits (730), Expect = 2e-091
Identities = 143/176 (81%), Positives = 156/176 (88%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 50 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 229
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 230 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 409
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
KIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL PD LI
Sbjct: 410 KIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 577
Score = 267 bits (577), Expect = 7e-071
Identities = 126/174 (72%), Positives = 138/174 (79%)
Frame = -3 / -1
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 564 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 385
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 384 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 205
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
GS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 204 GSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 43
>gb|DT631127.1|DT631127 EST1146058 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF526 3' end, mRNA sequence
Length = 875
Score = 210 bits (452), Expect(2) = 2e-090
Identities = 93/113 (82%), Positives = 96/113 (84%)
Frame = +3 / +2
Query: 390 RNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIV 569
+NLFFS+DVEKHVAEADI+FVSVNTPTKTRGLG GKAADLTYWESAARMIADVSKSDKIV
Sbjct: 377 KNLFFSSDVEKHVAEADIVFVSVNTPTKTRGLGHGKAADLTYWESAARMIADVSKSDKIV 556
Query: 570 VEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
VEKSTVPVKTAEAIEKILTH SKGINYQILS A DL PD LI
Sbjct: 557 VEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAINDLLKPDRVLI 715
Score = 171 bits (368), Expect(2) = 3e-073
Identities = 84/112 (75%), Positives = 85/112 (75%)
Frame = -3 / -3
Query: 727 MXXXSGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLE 548
M SG RS A ERI *L+PLL WVKIFSIASAVLTGTVDFSTTILSDLE
Sbjct: 714 MSTRSGFNRSFIAVPSARNSGLERI**LIPLLLWVKIFSIASAVLTGTVDFSTTILSDLE 535
Query: 547 TSAIIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRF 392
TSAII AALSQ*VRSAA P P P V VGVFTET MSASATCFSTS LKKRF
Sbjct: 534 TSAIILAALSQ*VRSAAFPWPRPLVFVGVFTETNTMSASATCFSTSELKKRF 379
Score = 145 bits (311), Expect(2) = 2e-090
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICCIGAGYVGGPTMAVIALKCP IEVVVVD S PRI+AWNSD LPIYEPGLD+VVK
Sbjct: 184 KMVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDTSNPRIDAWNSDQLPIYEPGLDEVVK 363
Query: 378 QCRGRNLFF 404
CRG+ F
Sbjct: 364 ACRGKKPLF 390
Score = 124 bits (265), Expect(2) = 3e-073
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3 / -1
Query: 403 KKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PA 224
K+ F PL TTSSRPGS*IG SLF AS+RGLE+STTTTSM+GH RA+TAMVGPPT PA
Sbjct: 389 KRGFFPLQALTTSSRPGS*IGS*SLFHASIRGLEVSTTTTSMAGHFRAITAMVGPPTYPA 210
Query: 223 PMQQIFTIL 197
PMQQIFTIL
Sbjct: 209 PMQQIFTIL 183
Score = 78.0 bits (164), Expect(2) = 2e-030
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2 / +3
Query: 197 QDGEDLLHRCWLCRWPNHGCHCPQVPRH*GCRC*HLQAPH*GLEQRHPPDLRARPR*CCE 376
QDGEDLLHR +C WP+HGC ++PRH* *HL + +* +EQR DL P * C+
Sbjct: 183 QDGEDLLHRSRVCGWPHHGCDSSEMPRH*SRSS*HL*SSN*CVEQRSASDL*TWP**SCQ 362
Query: 377 AVQGQE 394
++QG++
Sbjct: 363 SLQGKK 380
Score = 74.8 bits (157), Expect(2) = 2e-030
Identities = 37/96 (38%), Positives = 55/96 (57%)
Frame = +2 / +1
Query: 374 EAVQGQEPLLQH*C*EARR*G*HHLRLGEHPHQDPWAWSWQGCRPHLLGERCSYDRRCLQ 553
+A +G++PL Q C EA * H +R +HPH+D W+ CR LLG+R D RC
Sbjct: 361 KACRGKKPLFQFRCREACC*SRHCVRFSKHPHEDKRPRPWKSCRSDLLGKRG*NDSRCF* 540
Query: 554 V*QDRCREVHRPCQDR*GY*EDLDPXQQGHQLPDPF 661
+ Q+ E++ C + G *+D +P QQG+ L + F
Sbjct: 541 IGQNCR*EINSSC*NSRGN*KDFNPQQQGN*LSNSF 648
>gb|DR682507.1|DR682507 EST1072582 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAA32 3' end, mRNA sequence
Length = 714
Score = 210 bits (452), Expect(2) = 2e-090
Identities = 93/113 (82%), Positives = 96/113 (84%)
Frame = +3 / +3
Query: 390 RNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIV 569
+NLFFS+DVEKHVAEADI+FVSVNTPTKTRGLG GKAADLTYWESAARMIADVSKSDKIV
Sbjct: 309 KNLFFSSDVEKHVAEADIVFVSVNTPTKTRGLGHGKAADLTYWESAARMIADVSKSDKIV 488
Query: 570 VEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
VEKSTVPVKTAEAIEKILTH SKGINYQILS A DL PD LI
Sbjct: 489 VEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAINDLLKPDRVLI 647
Score = 171 bits (368), Expect(2) = 3e-073
Identities = 84/112 (75%), Positives = 85/112 (75%)
Frame = -3 / -3
Query: 727 MXXXSGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLE 548
M SG RS A ERI *L+PLL WVKIFSIASAVLTGTVDFSTTILSDLE
Sbjct: 646 MSTRSGFNRSFIAVPSARNSGLERI**LIPLLLWVKIFSIASAVLTGTVDFSTTILSDLE 467
Query: 547 TSAIIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRF 392
TSAII AALSQ*VRSAA P P P V VGVFTET MSASATCFSTS LKKRF
Sbjct: 466 TSAIILAALSQ*VRSAAFPWPRPLVFVGVFTETNTMSASATCFSTSELKKRF 311
Score = 145 bits (311), Expect(2) = 2e-090
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICCIGAGYVGGPTMAVIALKCP IEVVVVD S PRI+AWNSD LPIYEPGLD+VVK
Sbjct: 116 KMVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDTSNPRIDAWNSDQLPIYEPGLDEVVK 295
Query: 378 QCRGRNLFF 404
CRG+ F
Sbjct: 296 ACRGKKPLF 322
Score = 124 bits (265), Expect(2) = 3e-073
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3 / -1
Query: 403 KKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PA 224
K+ F PL TTSSRPGS*IG SLF AS+RGLE+STTTTSM+GH RA+TAMVGPPT PA
Sbjct: 321 KRGFFPLQALTTSSRPGS*IGS*SLFHASIRGLEVSTTTTSMAGHFRAITAMVGPPTYPA 142
Query: 223 PMQQIFTIL 197
PMQQIFTIL
Sbjct: 141 PMQQIFTIL 115
Score = 78.0 bits (164), Expect(2) = 2e-030
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2 / +1
Query: 197 QDGEDLLHRCWLCRWPNHGCHCPQVPRH*GCRC*HLQAPH*GLEQRHPPDLRARPR*CCE 376
QDGEDLLHR +C WP+HGC ++PRH* *HL + +* +EQR DL P * C+
Sbjct: 115 QDGEDLLHRSRVCGWPHHGCDSSEMPRH*SRSS*HL*SSN*CVEQRSASDL*TWP**SCQ 294
Query: 377 AVQGQE 394
++QG++
Sbjct: 295 SLQGKK 312
Score = 74.8 bits (157), Expect(2) = 2e-030
Identities = 37/96 (38%), Positives = 55/96 (57%)
Frame = +2 / +2
Query: 374 EAVQGQEPLLQH*C*EARR*G*HHLRLGEHPHQDPWAWSWQGCRPHLLGERCSYDRRCLQ 553
+A +G++PL Q C EA * H +R +HPH+D W+ CR LLG+R D RC
Sbjct: 293 KACRGKKPLFQFRCREACC*SRHCVRFSKHPHEDKRPRPWKSCRSDLLGKRG*NDSRCF* 472
Query: 554 V*QDRCREVHRPCQDR*GY*EDLDPXQQGHQLPDPF 661
+ Q+ E++ C + G *+D +P QQG+ L + F
Sbjct: 473 IGQNCR*EINSSC*NSRGN*KDFNPQQQGN*LSNSF 580
>gb|DR180298.1|DR180298 RTMNUT1_27_E10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_E10_A029 5', mRNA sequence
Length = 688
Score = 290 bits (627), Expect(2) = 2e-087
Identities = 126/154 (81%), Positives = 132/154 (85%)
Frame = +3 / +2
Query: 267 KCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADII 446
KCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK CRG+NLFFS+DVEKHV EADII
Sbjct: 155 KCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVKGCRGKNLFFSSDVEKHVLEADII 334
Query: 447 FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILT 626
FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILT
Sbjct: 335 FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILT 514
Query: 627 HXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
H +KGIN+QILS A +DL PD LI
Sbjct: 515 HNTKGINFQILSNPEFLAEGTAIQDLLNPDRVLI 616
Score = 222 bits (480), Expect(2) = 7e-064
Identities = 105/149 (70%), Positives = 115/149 (77%)
Frame = -3 / -2
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RS A ERIW L+PL+ V+IFSIASAV TGTVDFSTTILSD ETSAI
Sbjct: 603 SGFRRS*IAVPSARNSGFERIWKLIPLVLCVRIFSIASAVFTGTVDFSTTILSDFETSAI 424
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAALSQ VRSAA PAP PRVLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRP
Sbjct: 423 IRAALSQYVRSAAFPAPRPRVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRP 244
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTSMSGH 269
GS*IG SLF A++ E+STTTTSM+GH
Sbjct: 243 GS*IGSWSLFHAAILADEISTTTTSMAGH 157
Score = 55.1 bits (114), Expect(2) = 2e-087
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIA 263
KMVKICC+GAGYVGGPTMA+IA
Sbjct: 88 KMVKICCLGAGYVGGPTMAIIA 153
Score = 41.8 bits (85), Expect(2) = 7e-064
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3 / -3
Query: 262 AMTAMVGPPT*PAPMQQIFTILS 194
AM A+VGPPT PAP QQIFTI +
Sbjct: 152 AMMAIVGPPTYPAPRQQIFTIFT 84
>gb|BF169605.1|BF169605 NXCI_125_B12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_125_B12 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 526
Score = 321 bits (695), Expect = 1e-086
Identities = 135/155 (87%), Positives = 142/155 (91%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 59 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 238
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CRG+NLFFS+DVEKHV EADIIFVSVNTPTKTRGLGAG A TYWESAARMIADVSKS
Sbjct: 239 GCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGXXAXXTYWESAARMIADVSKS 418
Query: 558 DKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILS 662
DKIVVEKSTVPVKTAE IEKILTH +KGIN+QILS
Sbjct: 419 DKIVVEKSTVPVKTAEXIEKILTHNTKGINFQILS 523
Score = 246 bits (531), Expect = 2e-064
Identities = 112/156 (71%), Positives = 124/156 (79%)
Frame = -3 / -2
Query: 661 ERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPAPS 482
ERIW L+PL+ V+IFS SAV TGTVDFSTTILSD ETSAIIRAALSQ V A PAP
Sbjct: 522 ERIWKLIPLVLCVRIFSXXSAVFTGTVDFSTTILSDFETSAIIRAALSQYVXXAXXPAPR 343
Query: 481 PRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLE 302
PRVLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRPGS*IG SLF A++ E
Sbjct: 342 PRVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRPGS*IGSWSLFHAAILADE 163
Query: 301 MSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
+STTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 162 ISTTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 55
>gb|BG040464.1|BG040464 NXSI_108_E06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_108_E06 5' similar to Arabidopsis thaliana
sequence At1g26570 UDP-glucose dehydrogenase like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 548
Score = 292 bits (631), Expect = 8e-078
Identities = 121/153 (79%), Positives = 134/153 (87%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 89 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 268
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAG ADLTYWE ARMIADVSK
Sbjct: 269 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGXXADLTYWEXXARMIADVSKXX 448
Query: 561 KIVVEKSTVPVKTAEAIEKILTHXSKGINYQIL 659
KIVV STVPVKTAEA KILTH +KG ++ L
Sbjct: 449 KIVVXXSTVPVKTAEAXXKILTHNNKGXHFXXL 547
Score = 241 bits (520), Expect = 5e-063
Identities = 111/149 (74%), Positives = 121/149 (81%)
Frame = -3 / -3
Query: 640 PLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPAPSPRVLVGV 461
PLL WV+I SIASAV TGTV STTIL +TSAIIRA SQ*VRSA PAPSPRVLVGV
Sbjct: 528 PLLLWVRIXSIASAVFTGTVXXSTTILXXFDTSAIIRAXXSQ*VRSAXXPAPSPRVLVGV 349
Query: 460 FTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTS 281
TET +SASATCFSTS LKKRFLP TTSSRPGS IGR SLFQA +R EMSTTTTS
Sbjct: 348 LTETNTISASATCFSTSELKKRFLPRQSRTTSSRPGSNIGRRSLFQALIRDTEMSTTTTS 169
Query: 280 MSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 168 ISGHLSAIMAIVGPPTYPAPMQQIFTMVA 82
>gb|BX255050.1|BX255050 BX255050 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP109H04, mRNA sequence
Length = 569
Score = 273 bits (591), Expect = 3e-072
Identities = 112/124 (90%), Positives = 119/124 (95%)
Frame = +3 / +3
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVK+CCIGAGYVGGPTMAVIALKCP IEVVVVDIS+PRI+AWNSD LPIYEPGLD+VVK
Sbjct: 198 KMVKVCCIGAGYVGGPTMAVIALKCPAIEVVVVDISEPRIDAWNSDQLPIYEPGLDEVVK 377
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CRG+NLFFS+DVEKHVAEADI+FVSVNTPTKTRGLG GKAADLTYWESAARMIADV KS
Sbjct: 378 ACRGKNLFFSSDVEKHVAEADIVFVSVNTPTKTRGLGHGKAADLTYWESAARMIADVFKS 557
Query: 558 DKIV 569
DKIV
Sbjct: 558 DKIV 569
Score = 216 bits (467), Expect = 1e-055
Identities = 100/124 (80%), Positives = 104/124 (83%)
Frame = -3 / -2
Query: 568 TILSDLETSAIIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFL 389
TILSDL+TSAII AALSQ*VRSAA P P P V VGVFTET MSASATCFSTS LKKRF
Sbjct: 568 TILSDLKTSAIILAALSQ*VRSAAFPWPRPLVFVGVFTETNTMSASATCFSTSELKKRFF 389
Query: 388 PLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQI 209
PL TTSSRPGS*IG SLF AS+RG EMSTTTTSM+GH RA+TAMVGPPT PAPMQQ
Sbjct: 388 PLQALTTSSRPGS*IGS*SLFHASIRGSEMSTTTTSMAGHFRAITAMVGPPTYPAPMQQT 209
Query: 208 FTIL 197
FTIL
Sbjct: 208 FTIL 197
Score = 126 bits (269), Expect = 2e-028
Identities = 58/123 (47%), Positives = 75/123 (60%)
Frame = +2 / +2
Query: 197 QDGEDLLHRCWLCRWPNHGCHCPQVPRH*GCRC*HLQAPH*GLEQRHPPDLRARPR*CCE 376
QDGE LLHR +C WP+HGC ++PRH* *HL A * +EQR DL P * C+
Sbjct: 197 QDGEGLLHRSRVCGWPHHGCDSSEMPRH*SRSS*HL*ASD*RVEQRSASDL*TWP**SCQ 376
Query: 377 AVQGQEPLLQH*C*EARR*G*HHLRLGEHPHQDPWAWSWQGCRPHLLGERCSYDRRCLQV 556
++QG++PL Q C*EA * H +R +HPH+D W+ CR LLG+R D RC +
Sbjct: 377 SLQGKKPLFQFRC*EACC*SRHCVRFSKHPHEDKRPRPWKSCRSDLLGKRG*NDSRCF*I 556
Query: 557 *QD 565
Q+
Sbjct: 557 RQN 565
Score = 105 bits (223), Expect = 5e-022
Identities = 52/117 (44%), Positives = 71/117 (60%)
Frame = -2 / -1
Query: 545 IGDHTSSALPVGEVGSLASSKPTGLGGGVHRDEXXXXXXXXXLNISAEEEVPAPALLHNI 366
IG H+S A PVG++ S + ++ + L GGV+ +E LNI E+EV +PA N
Sbjct: 545 IGYHSSRAFPVGQICSFSMAEASCLRGGVY*NEHNVGFSNMLLNIGTEKEVFSPAGFDNF 366
Query: 365 IEAGLVDREGVAVPGLNAGLGDVNNDNLNVWALEGNDSHGWATDIASTDAADLHHLV 195
I+A +DR+ +AVP +N L DVN + N A + SHG AT I +DAADLHHLV
Sbjct: 365 IKARFIDRKLIAVPRVNPRLRDVNYYDFNGGAFQSYHSHGGATHIPCSDAADLHHLV 195
>gb|AW985236.1|AW985236 NXNV_132_G09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_132_G09 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 450
Score = 271 bits (586), Expect = 1e-071
Identities = 124/149 (83%), Positives = 130/149 (87%)
Frame = +3 / +2
Query: 282 EVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVN 461
EVVVVDIS RI AWNSD LPIYEPGLD+VVK CRG+NLFFS+DVEKHV EADIIFVSVN
Sbjct: 2 EVVVVDISSARIAAWNSDQLPIYEPGLDEVVKGCRGKNLFFSSDVEKHVLEADIIFVSVN 181
Query: 462 TPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKG 641
TPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA IEKILTH +KG
Sbjct: 182 TPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAXXIEKILTHNTKG 361
Query: 642 INYQILSXXXXXAXXXXXEDLXXPDXXLI 728
IN+QILS A + L PD LI
Sbjct: 362 INFQILSNPEFLAXXXAIQXLXXPDRVLI 448
Score = 203 bits (438), Expect = 1e-051
Identities = 94/127 (74%), Positives = 103/127 (81%)
Frame = -3 / -1
Query: 661 ERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPAPS 482
ERIW L+PL+ V+IFS AV TGTVDFSTTILSD ETSAIIRAALSQ VRSAA PAP
Sbjct: 381 ERIWKLIPLVLCVRIFSXXXAVFTGTVDFSTTILSDFETSAIIRAALSQYVRSAAFPAPR 202
Query: 481 PRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLE 302
PRVLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRPGS*IG SLF A++ E
Sbjct: 201 PRVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRPGS*IGSWSLFHAAILADE 22
Query: 301 MSTTTTS 281
+STTTTS
Sbjct: 21 ISTTTTS 1
>gb|CV145879.1|CV145879 EST857088 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDQ19 5' end, mRNA sequence
Length = 915
Score = 263 bits (569), Expect = 3e-069
Identities = 113/144 (78%), Positives = 124/144 (86%)
Frame = +3 / +3
Query: 297 DISKPRIEAWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKT 476
DIS RI AWNSD LPI+EPGL++VV+ CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKT
Sbjct: 30 DISVSRINAWNSDRLPIFEPGLEEVVRLCRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKT 209
Query: 477 RGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQI 656
RGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTH +KGI++QI
Sbjct: 210 RGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNNKGIHFQI 389
Query: 657 LSXXXXXAXXXXXEDLXXPDXXLI 728
LS A EDL PD LI
Sbjct: 390 LSNPEFLAEGTAIEDLEKPDRVLI 461
Score = 209 bits (451), Expect = 2e-053
Identities = 103/145 (71%), Positives = 109/145 (75%)
Frame = -3 / -3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 448 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 269
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 268 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 89
Query: 355 GS*IGRVSLFQASMRGLEMSTTTTS 281
GS IGR SLFQA +R EMS TS
Sbjct: 88 GSNIGRRSLFQALIRDTEMSDFDTS 14
>gb|BQ702114.1|BQ702114 NXSI_125_D01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_125_D01 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 520
Score = 202 bits (435), Expect(2) = 3e-069
Identities = 82/95 (86%), Positives = 87/95 (91%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 112 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 291
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRG 482
CRG+NLFFS+DVEKHV EADIIFVSVNTPTKT G
Sbjct: 292 GCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTXG 396
Score = 151 bits (324), Expect(2) = 7e-050
Identities = 67/96 (69%), Positives = 76/96 (79%)
Frame = -3 / -3
Query: 481 PRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLE 302
P VLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRPGS*IG SLF A++ E
Sbjct: 395 PXVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRPGS*IGSWSLFHAAILADE 216
Query: 301 MSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
+STTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 215 ISTTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 108
Score = 82.2 bits (173), Expect(2) = 3e-069
Identities = 37/47 (78%), Positives = 37/47 (78%)
Frame = +3 / +2
Query: 465 PTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAE 605
P K A A LTYWESAARMIADVSKSDKIVVEKSTVPVKTAE
Sbjct: 380 PLKXXXXXAXXXAXLTYWESAARMIADVSKSDKIVVEKSTVPVKTAE 520
Score = 66.6 bits (139), Expect(2) = 7e-050
Identities = 32/39 (82%), Positives = 32/39 (82%)
Frame = -3 / -2
Query: 604 SAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPA 488
SAV TGTVDFSTTILSD ETSAIIRAALSQ VR A A
Sbjct: 519 SAVFTGTVDFSTTILSDFETSAIIRAALSQYVRXAXFXA 403
>gb|BX251300.1|BX251300 BX251300 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP047H06 similar to UDP GLUCOSE 6
DEHYDROGENASE, mRNA sequence
Length = 672
Score = 260 bits (562), Expect = 2e-068
Identities = 112/136 (82%), Positives = 118/136 (86%)
Frame = +3 / +3
Query: 321 AWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKA 500
AWNSD LPIYEPGLD+VVK CRG+NLFFS+DVEKHV EADIIFVSVNTPTKTRGLGAGKA
Sbjct: 3 AWNSDQLPIYEPGLDEVVKGCRGKNLFFSSDVEKHVLEADIIFVSVNTPTKTRGLGAGKA 182
Query: 501 ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXA 680
ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTH +KGIN+QILS A
Sbjct: 183 ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNTKGINFQILSNPEFLA 362
Query: 681 XXXXXEDLXXPDXXLI 728
+DL PD LI
Sbjct: 363 EGTAIQDLLNPDRVLI 410
Score = 202 bits (435), Expect = 3e-051
Identities = 96/132 (72%), Positives = 102/132 (77%)
Frame = -3 / -3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RS A ERIW L+PL+ V+IFSIASAV TGTVDFSTTILSD ETSAI
Sbjct: 397 SGFRRS*IAVPSARNSGFERIWKLIPLVLCVRIFSIASAVFTGTVDFSTTILSDFETSAI 218
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAALSQ*VRSAA PAP PRVLVGVFT+T +MSAS TCFSTS LK +F PL FTTSSRP
Sbjct: 217 IRAALSQ*VRSAAFPAPRPRVLVGVFTDTNIMSASKTCFSTSELKNKFFPLQPFTTSSRP 38
Query: 355 GS*IGRVSLFQA 320
GS*IG SLF A
Sbjct: 37 GS*IGSWSLFHA 2
>gb|CF391377.1|CF391377 RTDR3_1_F02.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_F02_A022 5', mRNA
sequence
Length = 581
Score = 258 bits (558), Expect = 9e-068
Identities = 105/120 (87%), Positives = 115/120 (95%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 221 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 400
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 560
CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
Sbjct: 401 CRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 580
Score = 205 bits (443), Expect = 2e-052
Identities = 95/122 (77%), Positives = 104/122 (85%)
Frame = -3 / -3
Query: 559 SDLETSAIIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLH 380
SD +TSAIIRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP
Sbjct: 579 SDFDTSAIIRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQ 400
Query: 379 CFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTI 200
TTSSRPGS IGR SLFQA +R EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+
Sbjct: 399 SRTTSSRPGSNIGRRSLFQALIRDTEMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTM 220
Query: 199 LS 194
++
Sbjct: 219 VA 214
>gb|AW010207.1|AW010207 ST03D02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST03D02, mRNA sequence
Length = 656
Score = 256 bits (553), Expect = 4e-067
Identities = 112/152 (73%), Positives = 121/152 (79%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 142 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 321
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CRG+NLFFS+DVEKHV ADIIFVSVNTPTK G GAGK A+LT ESA M A VSKS
Sbjct: 322 GCRGKNLFFSSDVEKHVLXADIIFVSVNTPTKXXGPGAGKXANLT*LESATXMXAGVSKS 501
Query: 558 DKIVVEKSTVPVKTAEAIEKILTHXSKGINYQ 653
DK VV KST+PVKT + I K GI +Q
Sbjct: 502 DKXVVXKSTIPVKTTKXI*KXPHIIXXGIXFQ 597
Score = 203 bits (438), Expect = 1e-051
Identities = 94/153 (61%), Positives = 104/153 (67%)
Frame = -3 / -1
Query: 652 W*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPAPSPRV 473
W +P F I VLTG VDF TT LSD ET A I ALS VR A PAP P
Sbjct: 596 WKXIPXXIMCGXFQIXFVVLTGIVDFXTTXLSDFETPAXIXVALSNYVRFAXFPAPGPXX 417
Query: 472 LVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMST 293
LVGVFT+T +MSA TCFSTS LK +F PL FTTSSRPGS*IG SLF A++ E+ST
Sbjct: 416 LVGVFTDTNIMSAXKTCFSTSELKNKFFPLQPFTTSSRPGS*IGSWSLFHAAILADEIST 237
Query: 292 TTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
TTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 236 TTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 138
>gb|BQ696241.1|BQ696241 NXPV_037_A06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_037_A06 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 475
Score = 252 bits (545), Expect = 5e-066
Identities = 107/135 (79%), Positives = 118/135 (87%)
Frame = +3 / +1
Query: 321 AWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKA 500
AWNSD LPI+EPGL++VV+ CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKA
Sbjct: 1 AWNSDRLPIFEPGLEEVVRLCRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKA 180
Query: 501 ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXA 680
ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A
Sbjct: 181 ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLA 360
Query: 681 XXXXXEDLXXPDXXL 725
EDL PD L
Sbjct: 361 EGTAIEDLEKPDRVL 405
Score = 198 bits (426), Expect = 5e-050
Identities = 96/131 (73%), Positives = 101/131 (77%)
Frame = -3 / -3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 395 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 216
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 215 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 36
Query: 355 GS*IGRVSLFQ 323
GS IGR SLFQ
Sbjct: 35 GSNIGRRSLFQ 3
>gb|BE451961.1|BE451961 NXCI_006_G11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_006_G11 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 483
Score = 250 bits (540), Expect = 3e-065
Identities = 104/125 (83%), Positives = 109/125 (87%)
Frame = +3 / +3
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 108 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 287
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
C +NLFFS+DVEKHV EADIIFVSVNTPTKT GLGAGK A LTYWES RMIADVSKS
Sbjct: 288 GCXXKNLFFSSDVEKHVLEADIIFVSVNTPTKTXGLGAGKXAXLTYWESXXRMIADVSKS 467
Query: 558 DKIVV 572
DK V
Sbjct: 468 DKXXV 482
Score = 187 bits (403), Expect = 7e-047
Identities = 86/126 (68%), Positives = 95/126 (75%)
Frame = -3 / -3
Query: 571 TTILSDLETSAIIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRF 392
T LSD ETSAIIR LSQ VR A PAP P VLVGVFT+T +MSAS TCFSTS LK +F
Sbjct: 481 TXXLSDFETSAIIRXXLSQYVRXAXFPAPRPXVLVGVFTDTNIMSASKTCFSTSELKNKF 302
Query: 391 LPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQ 212
L FTTSSRPGS*IG SLF A++ E+STTTTSM+GH AM A+VGPPT PAP QQ
Sbjct: 301 FXLQPFTTSSRPGS*IGSWSLFHAAILADEISTTTTSMAGHFSAMMAIVGPPTYPAPRQQ 122
Query: 211 IFTILS 194
IFTI +
Sbjct: 121 IFTIFT 104
>gb|BG318777.1|BG318777 NXPV_016_G04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_016_G04 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 490
Score = 248 bits (535), Expect = 1e-064
Identities = 104/125 (83%), Positives = 109/125 (87%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 116 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 295
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKS 557
CRG+NLFFS+DVEKHV EADIIFVSVNT RGLGAGK A TYWESA RMIADVSKS
Sbjct: 296 XCRGKNLFFSSDVEKHVLEADIIFVSVNTXX*NRGLGAGKXAXXTYWESAXRMIADVSKS 475
Query: 558 DKIVV 572
D IVV
Sbjct: 476 DXIVV 490
Score = 182 bits (392), Expect = 2e-045
Identities = 84/126 (66%), Positives = 93/126 (73%)
Frame = -3 / -2
Query: 571 TTILSDLETSAIIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRF 392
TT SD ETSAIIR ALSQ V A PAP PR VFT+T +MSAS TCFSTS LK +F
Sbjct: 489 TTXXSDFETSAIIRXALSQYVXXAXFPAPRPRF*XXVFTDTNIMSASKTCFSTSELKNKF 310
Query: 391 LPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQ 212
PL FTTSSRPGS*IG SLF A++ E+STTTTSM+GH AM A+VGPPT PAP QQ
Sbjct: 309 FPLQXFTTSSRPGS*IGSWSLFHAAILADEISTTTTSMAGHFSAMMAIVGPPTYPAPRQQ 130
Query: 211 IFTILS 194
IFTI +
Sbjct: 129 IFTIFT 112
>gb|BF221092.1|BF221092 NXCI_163_C10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_163_C10 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 397
Score = 246 bits (532), Expect = 3e-064
Identities = 100/113 (88%), Positives = 106/113 (93%)
Frame = +3 / +3
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICCIGAGYVGGPTMAVIALKCP IEVVVVDIS PRI+AWNSD LPIYEPGLD+VVK
Sbjct: 57 KMVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISNPRIDAWNSDQLPIYEPGLDEVVK 236
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARM 536
CRG+NLFFS++VEKHVAEADI+FVSVNTPTKTRGLG GKAADLTYWESA M
Sbjct: 237 ACRGKNLFFSSNVEKHVAEADIVFVSVNTPTKTRGLGHGKAADLTYWESAXXM 395
Score = 195 bits (420), Expect = 3e-049
Identities = 89/114 (78%), Positives = 93/114 (81%)
Frame = -3 / -1
Query: 538 IIRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSR 359
I ALSQ*VRSAA P P P V VGVFTET MSASATCFST LKKRF PL TTSSR
Sbjct: 397 IXXXALSQ*VRSAAFPWPRPLVFVGVFTETNTMSASATCFSTLELKKRFFPLQALTTSSR 218
Query: 358 PGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTIL 197
PGS*IG SLF AS+RGL+MSTTTTSM+GH RA+TAMVGPPT PAPMQQIFTIL
Sbjct: 217 PGS*IGS*SLFHASIRGLDMSTTTTSMAGHFRAITAMVGPPTYPAPMQQIFTIL 56
Score = 121 bits (259), Expect = 5e-027
Identities = 53/114 (46%), Positives = 71/114 (62%)
Frame = +2 / +2
Query: 197 QDGEDLLHRCWLCRWPNHGCHCPQVPRH*GCRC*HLQAPH*GLEQRHPPDLRARPR*CCE 376
QDGEDLLHR +C WP+HGC ++PRH* *H+ + +* +EQR DL P * C+
Sbjct: 56 QDGEDLLHRSRVCGWPHHGCDSSEMPRH*SRSS*HI*SSN*CVEQRSASDL*TWP**SCQ 235
Query: 377 AVQGQEPLLQH*C*EARR*G*HHLRLGEHPHQDPWAWSWQGCRPHLLGERCSYD 538
++QG++PL Q C EA * H +R +HPH+D W+ CR LLG+R D
Sbjct: 236 SLQGKKPLFQFQCREACC*SRHCVRFSKHPHEDKRPRPWKSCRSDLLGKRXXXD 397
>gb|BG832837.1|BG832837 NXPV_081_C11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_081_C11 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 418
Score = 242 bits (523), Expect = 5e-063
Identities = 107/135 (79%), Positives = 117/135 (86%)
Frame = +3 / +1
Query: 321 AWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKA 500
AWNSD LPI+EPGL++VV+ CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKA
Sbjct: 1 AWNSDRLPIFEPGLEEVVRLCRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKA 180
Query: 501 ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXA 680
ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTH +KGI+ ILS A
Sbjct: 181 ADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNNKGIHXXILSNPEFLA 360
Query: 681 XXXXXEDLXXPDXXL 725
E PD L
Sbjct: 361 XGTAIEXXEKPDXXL 405
Score = 193 bits (416), Expect = 1e-048
Identities = 95/131 (72%), Positives = 100/131 (76%)
Frame = -3 / -3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG SS A + +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 395 SGFSXSSMAVPXARNSGLDNXXKWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 216
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 215 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 36
Query: 355 GS*IGRVSLFQ 323
GS IGR SLFQ
Sbjct: 35 GSNIGRRSLFQ 3
>gb|DR013127.1|DR013127 HEAT1_17_E04.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_17_E04_A029 3', mRNA sequence
Length = 859
Score = 233 bits (504), Expect = 2e-060
Identities = 100/127 (78%), Positives = 111/127 (87%)
Frame = +3 / -1
Query: 348 YEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESA 527
+EPGL++VV+ CRG+NLFFS+DVEKHVAEA+I+FVSVNTPTKTRGLGAGKAADLTYWESA
Sbjct: 856 FEPGLEEVVRLCRGKNLFFSSDVEKHVAEAEIVFVSVNTPTKTRGLGAGKAADLTYWESA 677
Query: 528 ARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXXXAXXXXXEDLX 707
ARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTH +KGI++QILS A EDL
Sbjct: 676 ARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEFLAEGTAIEDLE 497
Query: 708 XPDXXLI 728
PD LI
Sbjct: 496 KPDRVLI 476
Score = 185 bits (399), Expect = 3e-046
Identities = 89/122 (72%), Positives = 94/122 (77%)
Frame = -3 / +3
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 489 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 668
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRP 356
IRAA SQ*VRSAALPAPSPRVLVGV TET +SASATCFSTS LKKRFLP TTSSRP
Sbjct: 669 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRP 848
Query: 355 GS 350
GS
Sbjct: 849 GS 854
>gb|BQ698027.1|BQ698027 NXPV_063_F12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_063_F12 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 459
Score = 227 bits (491), Expect = 1e-058
Identities = 92/110 (83%), Positives = 97/110 (88%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD PIYEPGLD+VVK
Sbjct: 127 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDXXPIYEPGLDEVVK 306
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESA 527
CRG+NLFFS+DVEKHV DIIFVSVNTPTKTRGLGAGK A TYWESA
Sbjct: 307 XCRGKNLFFSSDVEKHVLXXDIIFVSVNTPTKTRGLGAGKXAXXTYWESA 456
Score = 168 bits (362), Expect = 3e-041
Identities = 75/111 (67%), Positives = 84/111 (75%)
Frame = -3 / -2
Query: 526 ALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS* 347
ALSQ V A PAP PRVLVGVFT+T +MS TCFSTS LK +F PL FTTSSRPGS*
Sbjct: 455 ALSQYVXXAXFPAPRPRVLVGVFTDTNIMSXXKTCFSTSELKNKFFPLQXFTTSSRPGS* 276
Query: 346 IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
IG SLF A++ E+STTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 275 IGXXSLFHAAILADEISTTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 123
>gb|BG039542.1|BG039542 NXSI_100_B12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_100_B12 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 442
Score = 215 bits (464), Expect = 7e-055
Identities = 89/109 (81%), Positives = 95/109 (87%)
Frame = +3 / +3
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVV+IS RI AWNSD LPIYEPGLD+VVK
Sbjct: 114 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVNISSARIAAWNSDQLPIYEPGLDEVVK 293
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWES 524
CRG+NLFFS+DVEK V EADIIFVSVNT TKT LGAGK A TYWES
Sbjct: 294 GCRGKNLFFSSDVEKXVLEADIIFVSVNTXTKTXXLGAGKXAXXTYWES 440
Score = 153 bits (329), Expect = 1e-036
Identities = 72/111 (64%), Positives = 81/111 (72%)
Frame = -3 / -1
Query: 526 ALSQ*VRSAALPAPSPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS* 347
ALSQ V A PAP VLV VFT+T +MSAS T FSTS LK +F PL FTTSSRPGS*
Sbjct: 442 ALSQYVXXAXFPAPXXXVLVXVFTDTNIMSASKTXFSTSELKNKFFPLQPFTTSSRPGS* 263
Query: 346 IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
IG SLF A++ E+ TTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 262 IGSWSLFHAAILADEIFTTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 110
>gb|BF169499.1|BF169499 NXCI_120_B12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_120_B12 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 354
Score = 189 bits (407), Expect = 4e-047
Identities = 76/95 (80%), Positives = 86/95 (90%)
Frame = +3 / +1
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 61 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 240
Query: 381 CRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGL 485
CRG+NLFFS+DVEKHVAEA+I+FVSVNT RGL
Sbjct: 241 CRGKNLFFSSDVEKHVAEAEIVFVSVNTXXXXRGL 345
Score = 152 bits (326), Expect = 3e-036
Identities = 69/97 (71%), Positives = 77/97 (79%)
Frame = -3 / -2
Query: 484 SPRVLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGL 305
SPR V TET +SASATCFSTS LKKRFLP TTSSRPGS IGR SLFQA +R
Sbjct: 344 SPRXXXXVLTETNTISASATCFSTSELKKRFLPRQSRTTSSRPGSNIGRRSLFQALIRDT 165
Query: 304 EMSTTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
EMSTTTTS+SGHL A+ A+VGPPT PAPMQQIFT+++
Sbjct: 164 EMSTTTTSISGHLSAIMAIVGPPTYPAPMQQIFTMVA 54
>gb|BG040630.1|BG040630 NXSI_113_C12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_113_C12 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 393
Score = 184 bits (396), Expect = 1e-045
Identities = 75/93 (80%), Positives = 80/93 (86%)
Frame = +3 / +3
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS I AWNSD LPIYEPGLD+VV
Sbjct: 114 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSAXIAAWNSDQLPIYEPGLDEVVX 293
Query: 378 QCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKT 476
C +NLFFS+DVEKHV DIIFVSVNTPTKT
Sbjct: 294 XCXXKNLFFSSDVEKHVLXXDIIFVSVNTPTKT 392
Score = 138 bits (297), Expect = 3e-032
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -3 / -3
Query: 475 VLVGVFTETKMMSASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMS 296
VLVGVFT+T +MS TCFSTS LK +F FTTSSRPGS*IG SLF A++ E+S
Sbjct: 391 VLVGVFTDTNIMSXXKTCFSTSELKNKFFXXXXFTTSSRPGS*IGSWSLFHAAIXADEIS 212
Query: 295 TTTTSMSGHLRAMTAMVGPPT*PAPMQQIFTILS 194
TTTTSM+GH AM A+VGPPT PAP QQIFTI +
Sbjct: 211 TTTTSMAGHFSAMMAIVGPPTYPAPRQQIFTIFT 110
>gb|CN785813.1|CN785813 EST784504 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAB379 5' end, mRNA sequence
Length = 748
Score = 177 bits (382), Expect = 1e-043
Identities = 79/99 (79%), Positives = 84/99 (84%)
Frame = +3 / +3
Query: 432 EADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 611
EA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI
Sbjct: 3 EAEIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 182
Query: 612 EKILTHXSKGINYQILSXXXXXAXXXXXEDLXXPDXXLI 728
EKILTH +KGI++QILS A EDL PD LI
Sbjct: 183 EKILTHNNKGIHFQILSNPEFLAEGTAIEDLEKPDRVLI 299
Score = 137 bits (294), Expect = 8e-032
Identities = 67/95 (70%), Positives = 72/95 (75%)
Frame = -3 / -1
Query: 715 SGXXRSSXXXXXAXXXXXERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAI 536
SG RSS A + I +PLL WV+IFSIASAV TGTVDFSTTILSD +TSAI
Sbjct: 286 SGFSRSSMAVPSARNSGLDNI*KWIPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAI 107
Query: 535 IRAALSQ*VRSAALPAPSPRVLVGVFTETKMMSAS 431
IRAA SQ*VRSAALPAPSPRVLVGV TET +SAS
Sbjct: 106 IRAADSQ*VRSAALPAPSPRVLVGVLTETNTISAS 2
>gb|BF609646.1|BF609646 NXSI_047_F05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_047_F05 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 338
Score = 163 bits (351), Expect = 2e-039
Identities = 65/79 (82%), Positives = 73/79 (92%)
Frame = +3 / +2
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVKQ 380
MVKICCIGAGYVGGPTMA+IALKCP+IEVVVVDIS RI AWNSD LPI+EPGL++VV+
Sbjct: 89 MVKICCIGAGYVGGPTMAMIALKCPEIEVVVVDISVSRINAWNSDRLPIFEPGLEEVVRL 268
Query: 381 CRGRNLFFSTDVEKHVAEA 437
CRG+NLFFS+DVEKHVA A
Sbjct: 269 CRGKNLFFSSDVEKHVAXA 325
Score = 134 bits (287), Expect = 7e-031
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = -3 / -3
Query: 436 ASATCFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAM 257
A ATCFSTS LKKRFLP TTSSRPGS IGR SLFQA +R EMSTTTTS+SGHL A+
Sbjct: 324 AXATCFSTSELKKRFLPRQSRTTSSRPGSNIGRRSLFQALIRDTEMSTTTTSISGHLSAI 145
Query: 256 TAMVGPPT*PAPMQQIFTILS 194
A+VGPPT PAPMQQIFT+++
Sbjct: 144 MAIVGPPTYPAPMQQIFTMVA 82
>gb|BX255245.1|BX255245 BX255245 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP113D11 similar to UDP GLUCOSE 6
DEHYDROGENASE, mRNA sequence
Length = 389
Score = 160 bits (345), Expect = 1e-038
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS RI AWNSD LPIYEPGLD+VVK
Sbjct: 163 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSARIAAWNSDQLPIYEPGLDEVVK 342
Query: 378 QCRGRNLFFSTDVEK 422
CRG+NLFFS+DVEK
Sbjct: 343 GCRGKNLFFSSDVEK 387
Score = 120 bits (256), Expect = 1e-026
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = -3 / -1
Query: 424 CFSTSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMV 245
CFSTS LK +F PL FTTSSRPGS*IG SLF A++ E+STTTTSM+GH AM A+V
Sbjct: 389 CFSTSELKNKFFPLQPFTTSSRPGS*IGSWSLFHAAILADEISTTTTSMAGHFSAMMAIV 210
Query: 244 GPPT*PAPMQQIFTILS 194
GPPT PAP QQIFTI +
Sbjct: 209 GPPTYPAPRQQIFTIFT 159
>gb|AW784126.1|AW784126 NXNV_103_D08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_103_D08 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 263
Score = 160 bits (344), Expect = 2e-038
Identities = 69/74 (93%), Positives = 73/74 (98%)
Frame = +3 / +3
Query: 441 IIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKI 620
I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKI
Sbjct: 6 IVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKI 185
Query: 621 LTHXSKGINYQILS 662
LTH +KGI++QILS
Sbjct: 186 LTHNNKGIHFQILS 227
Score = 125 bits (268), Expect = 3e-028
Identities = 57/65 (87%), Positives = 60/65 (92%)
Frame = -3 / -2
Query: 643 MPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPAPSPRVLVG 464
+PLL WV+IFSIASAV TGTVDFSTTILSD +TSAIIRAA SQ*VRSAALPAPSPRVLVG
Sbjct: 208 IPLLLWVRIFSIASAVFTGTVDFSTTILSDFDTSAIIRAADSQ*VRSAALPAPSPRVLVG 29
Query: 463 VFTET 449
V TET
Sbjct: 28 VLTET 14
>gb|BX253218.1|BX253218 BX253218 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP079H07 similar to UDP GLUCOSE 6
DEHYDROGENASE, mRNA sequence
Length = 233
Score = 151 bits (324), Expect = 1e-035
Identities = 65/68 (95%), Positives = 67/68 (98%)
Frame = +3 / +1
Query: 459 NTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSK 638
NTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTH +K
Sbjct: 1 NTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNTK 180
Query: 639 GINYQILS 662
GIN+QILS
Sbjct: 181 GINFQILS 204
Score = 123 bits (264), Expect = 1e-027
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = -3 / -1
Query: 661 ERIW*LMPLLXWVKIFSIASAVLTGTVDFSTTILSDLETSAIIRAALSQ*VRSAALPAPS 482
ERIW L+PL+ V+IFSIASAV TGTVDFSTTILSD ETSAIIRAALSQ*VRSAA PAP
Sbjct: 203 ERIWKLIPLVLCVRIFSIASAVFTGTVDFSTTILSDFETSAIIRAALSQ*VRSAAFPAPR 24
Query: 481 PRVLVGV 461
PRVLVGV
Sbjct: 23 PRVLVGV 3
>gb|BQ696209.1|BQ696209 NXPV_039_F04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_039_F04 5' similar to Arabidopsis
thaliana sequence At1g26570 UDP-glucose dehydrogenase
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 234
Score = 110 bits (234), Expect(2) = 1e-033
Identities = 42/54 (77%), Positives = 50/54 (92%)
Frame = +3 / +1
Query: 321 AWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRG 482
AWNSD LPI+EPGL++VV+ CRG+NLFFS+DVEKHVAEA+I+FVSV TPTKT G
Sbjct: 1 AWNSDRLPIFEPGLEEVVRLCRGKNLFFSSDVEKHVAEAEIVFVSVKTPTKTLG 162
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +3 / +3
Query: 465 PTKTRGLGAGKAADLTYWESAARMIAD 545
P K LGAGK ADLTYWESAARMIAD
Sbjct: 144 PNKNPWLGAGKXADLTYWESAARMIAD 224
>gb|BE607184.1|BE607184 NXCI_038_A08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_038_A08 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 327
Score = 133 bits (284), Expect = 3e-030
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVV IS I AWNSD LPIY PGLD+VVK
Sbjct: 121 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVXISSAXIAAWNSDXLPIYXPGLDEVVK 300
Query: 378 QCRGRNLFF 404
C G+N F
Sbjct: 301 GCXGKNXXF 327
>gb|BE123762.1|BE123762 NXNV_156_A02_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_156_A02 5' similar to Arabidopsis thaliana
sequence At1g26570 UDP-glucose dehydrogenase like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 255
Score = 129 bits (277), Expect = 3e-029
Identities = 60/78 (76%), Positives = 63/78 (80%)
Frame = +3 / +2
Query: 495 KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXX 674
KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTH +KGI++QILS
Sbjct: 2 KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNNKGIHFQILSNPEF 181
Query: 675 XAXXXXXEDLXXPDXXLI 728
EDL PD LI
Sbjct: 182 LXEGTXIEDLEKPDRVLI 235
>gb|AW290177.1|AW290177 NXNV015C07F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV015C07 5', mRNA sequence
Length = 283
Score = 128 bits (275), Expect = 5e-029
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +3 / +2
Query: 495 KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXX 674
KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA AIEKILTH +KGIN+QILS
Sbjct: 2 KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA*AIEKILTHNTKGINFQILSNPEF 181
Query: 675 XAXXXXXEDLXXPDXXLI 728
A +DL PD LI
Sbjct: 182 LAEGTAIQDLLNPDRVLI 235
>gb|CD026846.1|CD026846 NXNV015C07 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV015C07 5' similar to Arabidopsis thaliana sequence
At1g26570 UDP-glucose dehydrogenase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 283
Score = 128 bits (275), Expect = 5e-029
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +3 / +2
Query: 495 KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHXSKGINYQILSXXXX 674
KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA AIEKILTH +KGIN+QILS
Sbjct: 2 KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA*AIEKILTHNTKGINFQILSNPEF 181
Query: 675 XAXXXXXEDLXXPDXXLI 728
A +DL PD LI
Sbjct: 182 LAEGTAIQDLLNPDRVLI 235
>gb|BE451977.1|BE451977 NXCI_007_A01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_007_A01 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 244
Score = 127 bits (273), Expect = 1e-028
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +3 / +2
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVV IS I AWNSD LPIYEPGLD+VVK
Sbjct: 59 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVXISSAXIAAWNSDXLPIYEPGLDEVVK 238
Query: 378 QC 383
C
Sbjct: 239 GC 244
>gb|BF609500.1|BF609500 NXSI_043_D01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_043_D01 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 308
Score = 122 bits (262), Expect = 3e-027
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +3 / +3
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVVDIS I AWNSD LPIYEPGLD+ K
Sbjct: 123 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVDISSAXIAAWNSDQLPIYEPGLDEXXK 302
>gb|BF221303.1|BF221303 NXCI_157_B06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_157_B06 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 292
Score = 116 bits (249), Expect = 2e-025
Identities = 46/57 (80%), Positives = 49/57 (85%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDD 368
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVV IS I AWN D LPIYEPGLD+
Sbjct: 121 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVXISSAXIAAWNXDXLPIYEPGLDE 291
>gb|BF221328.1|BF221328 NXCI_157_D10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_157_D10 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 300
Score = 116 bits (247), Expect = 4e-025
Identities = 46/60 (76%), Positives = 49/60 (81%)
Frame = +3 / +1
Query: 198 KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 377
KMVKICC+GAGYVGGPTMA+IALKCP IEVVVV IS I AWN D PIYEPGLD+ K
Sbjct: 121 KMVKICCLGAGYVGGPTMAIIALKCPAIEVVVVXISSAXIAAWNXDXXPIYEPGLDEXXK 300
>gb|AW736991.1|AW736991 NXNV_082_G09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_082_G09 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 214
Score = 113 bits (242), Expect = 2e-024
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +3 / +1
Query: 201 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGL 362
MVKICCIGAGYVGGPT A+IALKCP+IEVVVVDI RI AWNSD LPI+EPGL
Sbjct: 49 MVKICCIGAGYVGGPTXAMIALKCPEIEVVVVDIXXSRINAWNSDRLPIFEPGL 210
>gb|CD023213.1|CD023213 NXPV_103_C04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_103_C04 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 173
Score = 113 bits (241), Expect = 2e-024
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +3 / +1
Query: 321 AWNSDTLPIYEPGLDDVVKQCRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGA 491
AWNSD LPI+EPGL++VV+ CRG+NLFFS+DV KHVAEA+I+ VSVNTPTKTR LGA
Sbjct: 1 AWNSDRLPIFEPGLEEVVRLCRGKNLFFSSDVXKHVAEAEIVXVSVNTPTKTRXLGA 171
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 327,722,976
Number of Sequences: 355925
Number of extensions: 5047101
Number of successful extensions: 47265
Number of sequences better than 1.0e-020: 83
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 10244352550
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)