TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2618988.2.1
(631 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX681374.1|BX681374 BX681374 RS Pinus pinaster cDNA clon... 141 3e-043
gb|DR111145.1|DR111145 RTS1_15_D11.g1_A029 Roots minus sulf... 134 5e-043
gb|CF472392.1|CF472392 RTDS1_9_E09.g1_A015 Drought-stressed... 134 5e-043
gb|DR091543.1|DR091543 RTAL1_22_H02.b1_A029 Roots plus adde... 133 1e-042
gb|CF393594.1|CF393594 RTDR3_15_B07.b1_A022 Loblolly pine r... 131 5e-042
gb|CF401719.1|CF401719 RTWW1_14_A04.g1_A015 Well-watered lo... 130 1e-040
gb|CO175549.1|CO175549 NDL1_55_B04.g1_A029 Needles control ... 134 1e-039
gb|DR694987.1|DR694987 EST1085080 Normalized pine embryo li... 138 1e-039
gb|DR177492.1|DR177492 RTMNUT1_5_D07.g1_A029 Roots minus mi... 125 1e-039
gb|CO161650.1|CO161650 FLD1_30_F08.b1_A029 Root flooded Pin... 133 2e-038
gb|CO161727.1|CO161727 FLD1_30_F08.g1_A029 Root flooded Pin... 133 2e-038
gb|CF666532.1|CF666532 RTCNT1_24_B10.b1_A029 Root control P... 123 2e-038
gb|DR019885.1|DR019885 STRS1_33_D06.b1_A034 Shoot tip pitch... 138 4e-038
gb|CF472330.1|CF472330 RTDS1_9_E09.b1_A015 Drought-stressed... 134 4e-038
gb|DR160864.1|DR160864 RTFE1_8_B03.g1_A029 Roots minus iron... 133 6e-038
gb|CO367803.1|CO367803 RTK1_36_E12.g1_A029 Roots minus pota... 133 6e-038
gb|DR386533.1|DR386533 RTHG1_15_G09.g1_A029 Roots plus adde... 133 6e-038
gb|CF394916.1|CF394916 RTDS2_8_F04.g1_A021 Drought-stressed... 125 8e-038
gb|CF394807.1|CF394807 RTDS2_7_F05.g1_A021 Drought-stressed... 125 8e-038
gb|CO363008.1|CO363008 RTK1_7_C07.b1_A029 Roots minus potas... 132 2e-037
gb|CO162822.1|CO162822 FLD1_37_F01.g1_A029 Root flooded Pin... 134 2e-037
gb|DR682869.1|DR682869 EST1072944 Normalized pine embryo li... 121 5e-037
gb|DR057656.1|DR057656 RTNIT1_7_C03.b1_A029 Roots minus nit... 122 6e-035
gb|CF473082.1|CF473082 RTDS1_1_H08.g1_A015 Drought-stressed... 95 1e-034
gb|DR057313.1|DR057313 RTNIT1_5_C03.b1_A029 Roots minus nit... 120 3e-034
gb|DR160776.1|DR160776 RTFE1_8_B03.b1_A029 Roots minus iron... 120 3e-034
gb|BX680435.1|BX680435 BX680435 RS Pinus pinaster cDNA clon... 143 1e-033
gb|DR057552.1|DR057552 RTNIT1_6_A10.g1_A029 Roots minus nit... 140 1e-032
gb|CO369926.1|CO369926 RTK1_55_G02.b1_A029 Roots minus pota... 138 3e-032
gb|DR088632.1|DR088632 RTAL1_3_G06.b1_A029 Roots plus added... 138 5e-032
gb|DT638838.1|DT638838 EST1153769 Normalized pine embryo li... 138 5e-032
gb|DR018056.1|DR018056 STRS1_20_E09.b1_A034 Shoot tip pitch... 136 1e-031
gb|DR388213.1|DR388213 RTHG1_26_G06.g1_A029 Roots plus adde... 136 2e-031
gb|DR015214.1|DR015214 STRS1_2_D11.b1_A034 Shoot tip pitch ... 135 3e-031
gb|DR021519.1|DR021519 STRS1_45_E08.b1_A034 Shoot tip pitch... 134 4e-031
gb|CX712559.1|CX712559 RTPQ1_3_F09.b2_A032 Roots treated wi... 133 8e-031
gb|BX249954.1|BX249954 BX249954 Pinus pinaster differenciat... 133 1e-030
gb|CF393653.1|CF393653 RTDR3_15_B07.g1_A022 Loblolly pine r... 133 2e-030
gb|CF478552.1|CF478552 RTWW3_20_C12.g1_A022 Well-watered lo... 132 2e-030
gb|BQ106995.1|BQ106995 NXLV085_C09_F NXLV (Nsf Xylem Late w... 130 1e-029
gb|CF385981.1|CF385981 RTDR1_7_E07.g1_A015 Loblolly pine ro... 130 1e-029
gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control P... 130 1e-029
gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control ... 130 1e-029
gb|CX645779.1|CX645779 COLD1_5_F07.b1_A029 Root cold Pinus ... 130 1e-029
gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch... 130 1e-029
gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch... 130 1e-029
gb|DR049066.1|DR049066 RTBOR1_13_C03.b1_A029 Roots plus add... 130 1e-029
gb|DR051169.1|DR051169 RTBOR1_28_D06.b1_A029 Roots plus add... 130 1e-029
gb|DR057749.1|DR057749 RTNIT1_7_C12.g1_A029 Roots minus nit... 102 2e-029
gb|CF474107.1|CF474107 RTWW2_18_C05.g1_A021 Well-watered lo... 129 2e-029
gb|BQ702864.1|BQ702864 NXSI_133_F03_F NXSI (Nsf Xylem Side ... 128 4e-029
gb|CF666932.1|CF666932 RTCNT1_27_C11.b1_A029 Root control P... 127 1e-028
gb|DR168393.1|DR168393 RTPHOS1_25_D11.b1_A029 Roots minus p... 127 1e-028
dbj|BD224444.1| Materials and methods for the modification ... 127 1e-028
gb|CO363000.1|CO363000 RTK1_7_B10.b1_A029 Roots minus potas... 107 1e-028
gb|CF670553.1|CF670553 RTCNT1_51_B03.b1_A029 Root control P... 105 6e-028
gb|CF385957.1|CF385957 RTDR1_7_E07.b1_A015 Loblolly pine ro... 123 1e-027
gb|DR060675.1|DR060675 RTNIT1_29_G03.b1_A029 Roots minus ni... 92 2e-027
gb|BQ698426.1|BQ698426 NXPV_069_G04_F NXPV (Nsf Xylem Plani... 122 3e-027
gb|CF474429.1|CF474429 RTWW2_20_F05.g1_A021 Well-watered lo... 122 3e-027
gb|CF478562.1|CF478562 RTWW3_20_A12.g1_A022 Well-watered lo... 121 4e-027
gb|CF400127.1|CF400127 RTWW1_3_H10.g1_A015 Well-watered lob... 120 8e-027
gb|CF471036.1|CF471036 RTDS1_16_G03.b1_A015 Drought-stresse... 119 2e-026
gb|BX681600.1|BX681600 BX681600 RS Pinus pinaster cDNA clon... 119 2e-026
gb|BX255181.1|BX255181 BX255181 Pinus pinaster differenciat... 92 3e-026
gb|CF387087.1|CF387087 RTDR1_10_C07.g1_A015 Loblolly pine r... 117 5e-026
dbj|BD224494.1| Materials and methods for the modification ... 92 6e-026
gb|CO169484.1|CO169484 NDL1_7_H09.b1_A029 Needles control P... 116 1e-025
gb|DR024108.1|DR024108 STRS1_62_A06.g1_A034 Shoot tip pitch... 77 2e-025
gb|DR015813.1|DR015813 STRS1_5_F11.g1_A034 Shoot tip pitch ... 77 2e-025
gb|BX681828.1|BX681828 BX681828 RS Pinus pinaster cDNA clon... 114 5e-025
gb|DR112323.1|DR112323 RTS1_27_H07.b1_A029 Roots minus sulf... 84 6e-025
gb|CF401652.1|CF401652 RTWW1_14_A04.b1_A015 Well-watered lo... 76 1e-024
gb|CF669253.1|CF669253 RTCNT1_41_H03.g1_A029 Root control P... 113 1e-024
gb|DR060591.1|DR060591 RTNIT1_28_F10.g1_A029 Roots minus ni... 112 2e-024
gb|DR742823.1|DR742823 RTCU1_7_E12.b2_A029 Roots plus added... 112 2e-024
gb|CX646003.1|CX646003 COLD1_6_D11.g1_A029 Root cold Pinus ... 111 3e-024
gb|DR060506.1|DR060506 RTNIT1_28_F10.b1_A029 Roots minus ni... 111 3e-024
gb|CF398051.1|CF398051 RTDS3_22_D05.b1_A022 Drought-stresse... 111 6e-024
gb|DR168289.1|DR168289 RTPHOS1_24_B04.g1_A029 Roots minus p... 95 7e-024
gb|CV134986.1|CV134986 EST846195 Sequencing ESTs from loblo... 110 9e-024
gb|DT626044.1|DT626044 EST1157968 Sequencing ESTs from lobl... 110 9e-024
gb|CO163860.1|CO163860 FLD1_44_F02.b1_A029 Root flooded Pin... 110 1e-023
gb|DR098127.1|DR098127 STRR1_39_F11.b1_A033 Stem Response R... 110 1e-023
gb|CF396075.1|CF396075 RTDS2_13_A03.g1_A021 Drought-stresse... 109 2e-023
gb|CF397219.1|CF397219 RTDS3_2_G04.b2_A022 Drought-stressed... 109 2e-023
gb|CF471539.1|CF471539 RTDS1_4_B06.b1_A015 Drought-stressed... 109 2e-023
gb|CF471631.1|CF471631 RTDS1_4_B06.g1_A015 Drought-stressed... 109 2e-023
gb|CF472572.1|CF472572 RTDS1_10_C02.g1_A015 Drought-stresse... 109 2e-023
gb|CO410810.1|CO410810 EST841195 Sequencing ESTs from loblo... 109 2e-023
gb|CO410963.1|CO410963 EST841348 Sequencing ESTs from loblo... 109 2e-023
gb|CO413888.1|CO413888 EST844273 Sequencing ESTs from loblo... 109 2e-023
gb|CO413944.1|CO413944 EST844329 Sequencing ESTs from loblo... 109 2e-023
gb|CO368412.1|CO368412 RTK1_40_B05.g1_A029 Roots minus pota... 109 2e-023
gb|CV033205.1|CV033205 RTNACL1_33_B10.b1_A029 Roots plus ad... 109 2e-023
gb|DN447754.1|DN447754 EST943553 Sequencing ESTs from loblo... 109 2e-023
gb|DR054596.1|DR054596 RTCA1_18_G11.b1_A029 Roots minus cal... 109 2e-023
gb|DR167350.1|DR167350 RTPHOS1_18_F11.b1_A029 Roots minus p... 109 2e-023
gb|DR181918.1|DR181918 RTMNUT1_41_F12.g1_A029 Roots minus m... 109 2e-023
gb|DT625922.1|DT625922 EST1157846 Sequencing ESTs from lobl... 109 2e-023
gb|DT624388.1|DT624388 EST1158663 Sequencing ESTs from lobl... 109 2e-023
gb|BQ702373.1|BQ702373 NXSI_127_H09_F NXSI (Nsf Xylem Side ... 108 3e-023
gb|DR683218.1|DR683218 EST1073294 Normalized pine embryo li... 95 3e-023
gb|BF610404.1|BF610404 NXSI_058_B08_F NXSI (Nsf Xylem Side ... 108 4e-023
gb|DR068609.1|DR068609 RTDK1_1_G05.g1_A029 Roots, dark Pinu... 95 6e-023
gb|CF402964.1|CF402964 RTWW1_24_E04.b1_A015 Well-watered lo... 95 6e-023
gb|DR018577.1|DR018577 STRS1_24_C07.b1_A034 Shoot tip pitch... 75 8e-023
gb|CF403057.1|CF403057 RTWW1_24_E04.g1_A015 Well-watered lo... 95 8e-023
gb|CF385056.1|CF385056 RTDR1_1_E08.g1_A015 Loblolly pine ro... 106 2e-022
gb|CF386347.1|CF386347 RTDR1_13_F04.g1_A015 Loblolly pine r... 106 2e-022
gb|CF387963.1|CF387963 RTDR1_17_E02.b1_A015 Loblolly pine r... 106 2e-022
gb|CF471647.1|CF471647 RTDS1_4_B03.g1_A015 Drought-stressed... 106 2e-022
gb|DR096904.1|DR096904 STRR1_31_E01.b1_A033 Stem Response R... 106 2e-022
gb|DR387418.1|DR387418 RTHG1_21_D05.g2_A029 Roots plus adde... 106 2e-022
gb|CF472144.1|CF472144 RTDS1_8_F05.g1_A015 Drought-stressed... 105 2e-022
gb|CO164324.1|CO164324 FLD1_47_F07.b1_A029 Root flooded Pin... 105 2e-022
gb|CO164398.1|CO164398 FLD1_47_F07.g1_A029 Root flooded Pin... 105 2e-022
gb|CO364719.1|CO364719 RTK1_21_H11.b1_A029 Roots minus pota... 105 2e-022
gb|CO364809.1|CO364809 RTK1_21_H11.g1_A029 Roots minus pota... 105 2e-022
gb|CO366290.1|CO366290 RTK1_27_A12.b1_A029 Roots minus pota... 105 2e-022
gb|CO366369.1|CO366369 RTK1_27_A12.g1_A029 Roots minus pota... 105 2e-022
gb|DR017842.1|DR017842 STRS1_18_G07.g1_A034 Shoot tip pitch... 105 2e-022
gb|DR389094.1|DR389094 RTHG1_32_H10.b1_A029 Roots plus adde... 105 2e-022
gb|BG039597.1|BG039597 NXSI_100_H07_F NXSI (Nsf Xylem Side ... 105 3e-022
gb|CV033279.1|CV033279 RTNACL1_33_B10.g1_A029 Roots plus ad... 105 3e-022
gb|DR386143.1|DR386143 RTHG1_13_E11.b1_A029 Roots plus adde... 105 3e-022
gb|CV035264.1|CV035264 RTNACL1_14_H03.g1_A029 Roots plus ad... 105 4e-022
gb|CO362361.1|CO362361 RTK1_3_C10.b1_A029 Roots minus potas... 104 5e-022
gb|DR023906.1|DR023906 STRS1_60_F12.g1_A034 Shoot tip pitch... 104 5e-022
gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magn... 91 7e-022
gb|DR024054.1|DR024054 STRS1_62_A06.b1_A034 Shoot tip pitch... 77 7e-022
gb|DR015728.1|DR015728 STRS1_5_F11.b1_A034 Shoot tip pitch ... 77 7e-022
gb|CF663283.1|CF663283 RTCNT1_1_H12.g1_A029 Root control Pi... 104 8e-022
gb|DR023823.1|DR023823 STRS1_60_F12.b1_A034 Shoot tip pitch... 104 8e-022
gb|CF670695.1|CF670695 RTCNT1_52_A02.b1_A029 Root control P... 103 1e-021
gb|CO197579.1|CO197579 GEO1_7_A12.g1_A029 Root gravitropism... 103 1e-021
gb|DR059072.1|DR059072 RTNIT1_15_C01.g1_A029 Roots minus ni... 103 1e-021
gb|CO165223.1|CO165223 FLD1_53_D08.b1_A029 Root flooded Pin... 91 1e-021
gb|BX678832.1|BX678832 BX678832 RS Pinus pinaster cDNA clon... 84 1e-021
gb|CF386446.1|CF386446 RTDR1_14_C12.g1_A015 Loblolly pine r... 103 1e-021
gb|CF400022.1|CF400022 RTWW1_2_A07.g1_A015 Well-watered lob... 103 1e-021
gb|CF401158.1|CF401158 RTWW1_10_D01.g1_A015 Well-watered lo... 103 1e-021
gb|CF470340.1|CF470340 RTDS1_18_D11.g1_A015 Drought-stresse... 103 1e-021
gb|CN785841.1|CN785841 EST784532 Sequencing ESTs from loblo... 103 1e-021
gb|CO165247.1|CO165247 FLD1_53_G10.b1_A029 Root flooded Pin... 103 1e-021
gb|CO201704.1|CO201704 RTCNT2_7_C09.g1_A029 Root control 2 ... 103 1e-021
gb|CV134798.1|CV134798 EST846007 Sequencing ESTs from loblo... 103 1e-021
gb|DR018897.1|DR018897 STRS1_26_B10.g1_A034 Shoot tip pitch... 103 1e-021
gb|DR051999.1|DR051999 RTCA1_1_F08.g1_A029 Roots minus calc... 103 1e-021
gb|DR388606.1|DR388606 RTHG1_29_G11.b1_A029 Roots plus adde... 103 1e-021
gb|DR745804.1|DR745804 RTCU1_32_D10.g1_A029 Roots plus adde... 103 1e-021
gb|DT625926.1|DT625926 EST1157850 Sequencing ESTs from lobl... 103 1e-021
gb|BE644117.1|BE644117 NXCI_054_F12_F NXCI (Nsf Xylem Compr... 92 2e-021
gb|BX249942.1|BX249942 BX249942 Pinus pinaster differenciat... 102 2e-021
gb|CF666281.1|CF666281 RTCNT1_22_D10.b1_A029 Root control P... 102 2e-021
gb|CF666350.1|CF666350 RTCNT1_22_D10.g1_A029 Root control P... 102 2e-021
gb|CO160820.1|CO160820 FLD1_24_E03.g1_A029 Root flooded Pin... 102 2e-021
gb|CO196958.1|CO196958 GEO1_2_H08.g1_A029 Root gravitropism... 102 2e-021
gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus adde... 92 3e-021
gb|DR743959.1|DR743959 RTCU1_19_G01.b1_A029 Roots plus adde... 92 3e-021
gb|CF392294.1|CF392294 RTDR3_7_D10.b1_A022 Loblolly pine ro... 90 3e-021
gb|CF473963.1|CF473963 RTWW2_18_C05.b1_A021 Well-watered lo... 102 3e-021
gb|DR018833.1|DR018833 STRS1_26_B10.b2_A034 Shoot tip pitch... 102 3e-021
gb|DR095142.1|DR095142 STRR1_19_C05.b1_A033 Stem Response R... 102 3e-021
gb|CO201469.1|CO201469 RTCNT2_6_A10.b1_A029 Root control 2 ... 90 3e-021
gb|CO171082.1|CO171082 NDL1_18_H08.g1_A029 Needles control ... 101 4e-021
gb|DR011191.1|DR011191 HEAT1_4_D07.b1_A029 Root at 37 C for... 69 4e-021
gb|BX255284.1|BX255284 BX255284 Pinus pinaster differenciat... 93 5e-021
gb|BE187204.1|BE187204 NXNV_160_E12_F Nsf Xylem Normal wood... 92 5e-021
gb|CF663199.1|CF663199 RTCNT1_1_H12.b1_A029 Root control Pi... 101 5e-021
gb|CF670450.1|CF670450 RTCNT1_50_F12.b1_A029 Root control P... 101 5e-021
gb|CO368218.1|CO368218 RTK1_39_G08.b1_A029 Roots minus pota... 100 7e-021
gb|CO368306.1|CO368306 RTK1_39_G08.g1_A029 Roots minus pota... 100 7e-021
gb|CO370290.1|CO370290 RTK1_67_A02.b1_A029 Roots minus pota... 100 7e-021
gb|DR180778.1|DR180778 RTMNUT1_34_F12.g1_A029 Roots minus m... 100 7e-021
gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciat... 92 9e-021
gb|AA556503.1|AA556503 358 Loblolly pine C Pinus taeda cDNA... 100 1e-020
gb|CO162696.1|CO162696 FLD1_37_A08.b1_A029 Root flooded Pin... 100 1e-020
gb|CO370199.1|CO370199 RTK1_66_E01.b1_A029 Roots minus pota... 100 1e-020
gb|DN458892.1|DN458892 EST954691 Sequencing ESTs from loblo... 100 1e-020
gb|DR169191.1|DR169191 RTPHOS1_30_E02.g1_A029 Roots minus p... 100 1e-020
gb|DR181620.1|DR181620 RTMNUT1_40_B04.b2_A029 Roots minus m... 100 1e-020
gb|DR181702.1|DR181702 RTMNUT1_40_B04.g2_A029 Roots minus m... 100 1e-020
gb|DT626677.1|DT626677 EST1159753 Sequencing ESTs from lobl... 100 1e-020
>gb|BX681374.1|BX681374 BX681374 RS Pinus pinaster cDNA clone RS58A01, mRNA sequence
Length = 637
Score = 141 bits (302), Expect(2) = 3e-043
Identities = 50/84 (59%), Positives = 70/84 (83%)
Frame = -3 / +1
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E D+ LLPEGF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ G+PM
Sbjct: 157 EADISHLLPEGFESRTRDRGLVVPSWAPQTPVLSHPSTGGFLSHCGWNSSIESILHGLPM 336
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+AWP+++EQR+N +FL +E Q+A+
Sbjct: 337 IAWPIFSEQRMNAIFLVEEKQVAI 408
Score = 54.2 bits (112), Expect(2) = 3e-043
Identities = 26/68 (38%), Positives = 37/68 (54%)
Frame = -3 / +1
Query: 377 VAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEATLT 198
VA+E G+V+ EEV VR L+E + G +KR M+ A +A+ EGG S T+
Sbjct: 400 VAIEPKKGPNGLVSKEEVERVVRELMEGESGVETKKRMKELMQTAHNAISEGGSSYNTMA 579
Query: 197 GLVDEWKR 174
L WK+
Sbjct: 580 TLASLWKQ 603
>gb|DR111145.1|DR111145 RTS1_15_D11.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_15_D11_A029 5', mRNA sequence
Length = 829
Score = 134 bits (288), Expect(2) = 5e-043
Identities = 49/81 (60%), Positives = 65/81 (80%)
Frame = -3 / -2
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
+LPEGF RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM+AWPL+
Sbjct: 642 VLPEGFETRTEDRGLVVDSWAPQIGVLSHPSTGGFLSHCGWNSTIESILHGVPMIAWPLF 463
Query: 428 AEQRLNRVFLEKEMQLAVAVE 366
AEQR+N L KEM++ + +
Sbjct: 462 AEQRMNAFLLVKEMKVGIEAQ 400
Score = 59.7 bits (124), Expect(2) = 5e-043
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -3 / -2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
++ V +E +G+V EEV R ++E DGG ++KR M +A+DA+ EGG S
Sbjct: 426 EMKVGIEAQKGADGLVKREEVERAAREVMEGDGGMEMKKRMEELMGKARDAVAEGGSSYN 247
Query: 206 TLTGLVDEWKRI 171
L + WK +
Sbjct: 246 ALAAVASVWKEM 211
>gb|CF472392.1|CF472392 RTDS1_9_E09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_E09_A015 5', mRNA sequence
Length = 819
Score = 134 bits (288), Expect(2) = 5e-043
Identities = 49/81 (60%), Positives = 65/81 (80%)
Frame = -3 / -2
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
+LPEGF RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM+AWPL+
Sbjct: 695 VLPEGFETRTEDRGLVVDSWAPQIGVLSHPSTGGFLSHCGWNSTIESILHGVPMIAWPLF 516
Query: 428 AEQRLNRVFLEKEMQLAVAVE 366
AEQR+N L KEM++ + +
Sbjct: 515 AEQRMNAFLLVKEMKVGIEAQ 453
Score = 59.7 bits (124), Expect(2) = 5e-043
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -3 / -2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
++ V +E +G+V EEV R ++E DGG ++KR M +A+DA+ EGG S
Sbjct: 479 EMKVGIEAQKGADGLVKREEVERAAREVMEGDGGMEMKKRMEELMGKARDAVAEGGSSYN 300
Query: 206 TLTGLVDEWKRI 171
L + WK +
Sbjct: 299 ALAAVASVWKEM 264
>gb|DR091543.1|DR091543 RTAL1_22_H02.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_H02_A029 3', mRNA sequence
Length = 828
Score = 133 bits (284), Expect(2) = 1e-042
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = -3 / +1
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
LLPEGF RT+D+GLVV SWAPQ VL+H S GGF+ HCGWNS LE++ GVPM+AWPL+
Sbjct: 205 LLPEGFEIRTRDQGLVVPSWAPQIPVLSHPSTGGFLCHCGWNSTLESISHGVPMIAWPLF 384
Query: 428 AEQRLNRVFLEKEMQLAV 375
AEQR+N+ L E Q+A+
Sbjct: 385 AEQRMNKFLLVNEFQVAI 438
Score = 60.2 bits (125), Expect(2) = 1e-042
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = -3 / +1
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ VA+E +G V EEV VR L+E +GG+ +R R A AL+EGG S
Sbjct: 421 EFQVAIEAKMESDGFVRKEEVERAVRELMEGEGGKRVRARARELKEAANTALQEGGSSYT 600
Query: 206 TLTGLVDEWK 177
+ +V EW+
Sbjct: 601 AMAAVVSEWR 630
>gb|CF393594.1|CF393594 RTDR3_15_B07.b1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_B07_A022 3', mRNA
sequence
Length = 556
Score = 131 bits (280), Expect(2) = 5e-042
Identities = 49/77 (63%), Positives = 61/77 (79%)
Frame = -3 / +1
Query: 605 LPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYA 426
LPEGF RT+D+GLVV SWAPQ VL+H S GGF+ HCGWNS LE++ GVPM+AWPL+A
Sbjct: 1 LPEGFEIRTRDQGLVVPSWAPQIPVLSHPSTGGFLCHCGWNSTLESISHGVPMIAWPLFA 180
Query: 425 EQRLNRVFLEKEMQLAV 375
EQR+N+ L E Q+A+
Sbjct: 181 EQRMNKFLLVNEFQVAI 231
Score = 60.2 bits (125), Expect(2) = 5e-042
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = -3 / +1
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ VA+E +G V EEV VR L+E +GG+ +R R A AL+EGG S
Sbjct: 214 EFQVAIEAKMESDGFVRKEEVERAVRELMEGEGGKRVRARARELKEAANTALQEGGSSYT 393
Query: 206 TLTGLVDEWK 177
+ +V EW+
Sbjct: 394 AMAAVVSEWR 423
>gb|CF401719.1|CF401719 RTWW1_14_A04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_A04_A015 5', mRNA sequence
Length = 750
Score = 130 bits (278), Expect(2) = 1e-040
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = -3 / +1
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
LLPEGF +RT+D+GLVV SWAPQ VL+H S GGF+ HCGWNS LE++ GVPM+AWPL+
Sbjct: 328 LLPEGFESRTRDQGLVVPSWAPQIPVLSHTSTGGFLCHCGWNSTLESISHGVPMIAWPLF 507
Query: 428 AEQRLNRVFLEKEMQLAV 375
AEQ NR L E ++A+
Sbjct: 508 AEQSTNRFLLVNEFKIAI 561
Score = 56.5 bits (117), Expect(2) = 1e-040
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = -3 / +1
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ +A+E +G V EEV R L+E +GG+ LR R +AK AL GG S
Sbjct: 544 EFKIAIEAKMESDGFVRREEVERAARELMEGEGGKRLRARAQELKEKAKTALEAGGSSCT 723
Query: 206 TLTGLVDEW 180
+ V EW
Sbjct: 724 AMAAAVSEW 750
>gb|CO175549.1|CO175549 NDL1_55_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_55_B04_A029 5', mRNA sequence
Length = 790
Score = 134 bits (287), Expect(2) = 1e-039
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = -3 / +3
Query: 623 PDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMV 444
P+L ALLP GF RTKDRGLVV SWAPQ +LAH S GGFV+HCGWNSVLE++ GVP +
Sbjct: 213 PNLSALLPPGFEQRTKDRGLVVTSWAPQVSILAHPSTGGFVSHCGWNSVLESIWFGVPFI 392
Query: 443 AWPLYAEQRLNRVFLEKEMQLAVAVE 366
AWPL A+QR FL + ++AV ++
Sbjct: 393 AWPLQADQRPVGYFLVNDSRIAVGLQ 470
Score = 49.2 bits (101), Expect(2) = 1e-039
Identities = 26/67 (38%), Positives = 33/67 (49%)
Frame = -3 / +3
Query: 377 VAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEATLT 198
+AV +GIV EEV R L++ + G+ L RT AK AL EGG S L
Sbjct: 453 IAVGLQKRKDGIVTKEEVEKAARELMDGENGKKLTVRTKELKECAKAALAEGGSSSQALA 632
Query: 197 GLVDEWK 177
+V WK
Sbjct: 633 EVVALWK 653
>gb|DR694987.1|DR694987 EST1085080 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEJ19 3' end, mRNA sequence
Length = 809
Score = 138 bits (295), Expect(2) = 1e-039
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = -3 / +1
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E D+ LLPEGF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM
Sbjct: 394 EADISHLLPEGFESRTRDRGLVVPSWAPQIPVLSHPSTGGFLSHCGWNSSIESILHGVPM 573
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+AWP++ EQR+N +FL + Q+A+
Sbjct: 574 IAWPIFGEQRMNAIFLVEANQVAI 645
Score = 45.1 bits (92), Expect(2) = 1e-039
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -3 / +1
Query: 377 VAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
VA+E G+V+ EEV VR L+E++ G +KR M+ A +A+ EGG
Sbjct: 637 VAIEPKKGQNGLVSKEEVERVVRELMEAESGVETKKRMTELMQTAHNAISEGG 795
>gb|DR177492.1|DR177492 RTMNUT1_5_D07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_5_D07_A029 5', mRNA sequence
Length = 727
Score = 125 bits (268), Expect(2) = 1e-039
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = -3 / +3
Query: 623 PDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMV 444
P+L LLP GF RTKDRGLVV SWAPQ +LAH S GG ++ CGWNSVLE+V GVP++
Sbjct: 111 PELRTLLPPGFEQRTKDRGLVVTSWAPQVAILAHPSTGGIISQCGWNSVLESVSHGVPII 290
Query: 443 AWPLYAEQRLNRVFLEKEMQLAV 375
WPL+AEQ+ L ++Q+AV
Sbjct: 291 TWPLHAEQKTTAFLLVNDIQVAV 359
Score = 57.4 bits (119), Expect(2) = 1e-039
Identities = 30/69 (43%), Positives = 38/69 (55%)
Frame = -3 / +3
Query: 383 LAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEAT 204
+ VAV + +GIV EEV VR L+E + G+ R+R A R AK A+ EGG S
Sbjct: 345 IQVAVGTHKGADGIVRKEEVEKAVRELMEGEVGKKRRERAKALKRSAKAAVAEGGSSFHA 524
Query: 203 LTGLVDEWK 177
L LV WK
Sbjct: 525 LQALVALWK 551
>gb|CO161650.1|CO161650 FLD1_30_F08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_30_F08_A029 3', mRNA sequence
Length = 851
Score = 133 bits (286), Expect(2) = 2e-038
Identities = 49/87 (56%), Positives = 67/87 (77%)
Frame = -3 / -1
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLP GF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS LE++ GVPM
Sbjct: 578 ETEISQLLPMGFESRTQDRGLVVASWAPQIPVLSHPSTGGFLSHCGWNSTLESISHGVPM 399
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAVAVE 366
+ WPL+AEQR+NR+ L E ++ ++ +
Sbjct: 398 ICWPLFAEQRMNRLLLVDEFKVGISAK 318
Score = 45.5 bits (93), Expect(2) = 2e-038
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -3 / -1
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + + V EV VR L+E +GG +R R A AL+EGG S
Sbjct: 344 EFKVGISAKMDSDDFVKRGEVERVVRELMEGEGGMRVRARVKELKEAAVSALKEGGSSYK 165
Query: 206 TLTGLVDEW 180
+ V EW
Sbjct: 164 AMAAAVSEW 138
>gb|CO161727.1|CO161727 FLD1_30_F08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_30_F08_A029 5', mRNA sequence
Length = 842
Score = 133 bits (286), Expect(2) = 2e-038
Identities = 49/87 (56%), Positives = 67/87 (77%)
Frame = -3 / -3
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLP GF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS LE++ GVPM
Sbjct: 723 ETEISQLLPMGFESRTQDRGLVVASWAPQIPVLSHPSTGGFLSHCGWNSTLESISHGVPM 544
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAVAVE 366
+ WPL+AEQR+NR+ L E ++ ++ +
Sbjct: 543 ICWPLFAEQRMNRLLLVDEFKVGISAK 463
Score = 45.5 bits (93), Expect(2) = 2e-038
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -3 / -3
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + + V EV VR L+E +GG +R R A AL+EGG S
Sbjct: 489 EFKVGISAKMDSDDFVKRGEVERVVRELMEGEGGMRVRARVKELKEAAVSALKEGGSSYK 310
Query: 206 TLTGLVDEW 180
+ V EW
Sbjct: 309 AMAAAVSEW 283
>gb|CF666532.1|CF666532 RTCNT1_24_B10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_24_B10_A029 3', mRNA sequence
Length = 659
Score = 123 bits (264), Expect(2) = 2e-038
Identities = 47/78 (60%), Positives = 59/78 (75%)
Frame = -3 / +2
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
LL EGF +RT+D+GLVV SWAPQ VL+H S G F+ HCGWNS LE++ GVPM+AWPL+
Sbjct: 53 LLHEGFQSRTRDQGLVVPSWAPQIPVLSHTSTGSFLRHCGWNSTLESISHGVPMIAWPLF 232
Query: 428 AEQRLNRVFLEKEMQLAV 375
AEQ NR L E ++A+
Sbjct: 233 AEQSTNRFLLVNEFKIAI 286
Score = 55.6 bits (115), Expect(2) = 2e-038
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = -3 / +2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ +A+E +G V EEV R L++ +GG+ LR R +AK AL GG S
Sbjct: 269 EFKIAIEAKMESDGFVRREEVERAARELMDGEGGKRLRARAQEFKEKAKTALEAGGSSCT 448
Query: 206 TLTGLVDEWK 177
+ V EW+
Sbjct: 449 AMAAAVSEWR 478
>gb|DR019885.1|DR019885 STRS1_33_D06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_D06_A034 3', mRNA sequence
Length = 846
Score = 138 bits (297), Expect(2) = 4e-038
Identities = 54/86 (62%), Positives = 67/86 (77%)
Frame = -3 / +3
Query: 623 PDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMV 444
P++ ALLP GF RTKDRGLVV SWAPQ +LAH S GGFV+HCGWNSVLE+V GVP++
Sbjct: 294 PEVSALLPPGFEQRTKDRGLVVTSWAPQVAILAHPSTGGFVSHCGWNSVLESVSHGVPII 473
Query: 443 AWPLYAEQRLNRVFLEKEMQLAVAVE 366
AWPL AEQR FL ++++A+ V+
Sbjct: 474 AWPLQAEQRTTAFFLVNDIKMAIRVQ 551
Score = 39.1 bits (79), Expect(2) = 4e-038
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -3 / +3
Query: 383 LAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEAT 204
+ +A+ +GIV EEV + L+E + G+ R AK AL EGG S
Sbjct: 528 IKMAIRVQRGADGIVGKEEVEKAAKELMEGEEGKKKTARARELRESAKAALAEGGSSSQA 707
Query: 203 LTGL 192
L +
Sbjct: 708 LAAV 719
>gb|CF472330.1|CF472330 RTDS1_9_E09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_E09_A015 3', mRNA sequence
Length = 576
Score = 134 bits (288), Expect(2) = 4e-038
Identities = 49/81 (60%), Positives = 65/81 (80%)
Frame = -3 / -1
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
+LPEGF RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM+AWPL+
Sbjct: 375 VLPEGFETRTEDRGLVVDSWAPQIGVLSHPSTGGFLSHCGWNSTIESILHGVPMIAWPLF 196
Query: 428 AEQRLNRVFLEKEMQLAVAVE 366
AEQR+N L KEM++ + +
Sbjct: 195 AEQRMNAFLLVKEMKVGIEAQ 133
Score = 43.2 bits (88), Expect(2) = 4e-038
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3 / -1
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDAL 231
++ V +E +G+V EEV R ++E DGG ++KR M +A+DA+
Sbjct: 159 EMKVGIEAQKGADGLVKREEVERAAREVMEGDGGMEMKKRMEELMGKARDAV 4
>gb|DR160864.1|DR160864 RTFE1_8_B03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_8_B03_A029 5', mRNA sequence
Length = 918
Score = 133 bits (284), Expect(2) = 6e-038
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -3 / +2
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLPEGF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM
Sbjct: 221 ETEISQLLPEGFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPM 400
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+ WPL+AEQ++NR+ L E ++ +
Sbjct: 401 ICWPLFAEQKMNRILLVDEFKVGI 472
Score = 44.6 bits (91), Expect(2) = 6e-038
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3 / +2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + +G V EV VR L+E + G +R R A +L EGG S
Sbjct: 455 EFKVGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYK 634
Query: 206 TLTGLVDEWKRI*RGTWGL 150
+ V EW I + G+
Sbjct: 635 GMAAAVSEWTTITANSEGI 691
>gb|CO367803.1|CO367803 RTK1_36_E12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_E12_A029 5', mRNA sequence
Length = 828
Score = 133 bits (284), Expect(2) = 6e-038
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -3 / -2
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLPEGF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM
Sbjct: 764 ETEISQLLPEGFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPM 585
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+ WPL+AEQ++NR+ L E ++ +
Sbjct: 584 ICWPLFAEQKMNRILLVDEFKVGI 513
Score = 44.6 bits (91), Expect(2) = 6e-038
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3 / -2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + +G V EV VR L+E + G +R R A +L EGG S
Sbjct: 530 EFKVGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYK 351
Query: 206 TLTGLVDEWKRI*RGTWGL 150
+ V EW I + G+
Sbjct: 350 GMAAAVSEWTTITANSEGI 294
>gb|DR386533.1|DR386533 RTHG1_15_G09.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_15_G09_A029 5', mRNA sequence
Length = 773
Score = 133 bits (284), Expect(2) = 6e-038
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -3 / +2
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLPEGF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM
Sbjct: 155 ETEISQLLPEGFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPM 334
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+ WPL+AEQ++NR+ L E ++ +
Sbjct: 335 ICWPLFAEQKMNRILLVDEFKVGI 406
Score = 44.6 bits (91), Expect(2) = 6e-038
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3 / +2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + +G V EV VR L+E + G +R R A +L EGG S
Sbjct: 389 EFKVGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYK 568
Query: 206 TLTGLVDEWKRI*RGTWGL 150
+ V EW I + G+
Sbjct: 569 GMAAAVSEWTTITANSEGI 625
>gb|CF394916.1|CF394916 RTDS2_8_F04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_F04_A021 5', mRNA sequence
Length = 816
Score = 125 bits (268), Expect(2) = 8e-038
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = -3 / +2
Query: 623 PDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMV 444
P+L LLP GF RTKDRGLVV SWAPQ +LAH S GG ++ CGWNSVLE+V GVP++
Sbjct: 206 PELRTLLPPGFEQRTKDRGLVVTSWAPQVAILAHPSTGGIISQCGWNSVLESVSHGVPII 385
Query: 443 AWPLYAEQRLNRVFLEKEMQLAV 375
WPL+AEQ+ L ++Q+AV
Sbjct: 386 TWPLHAEQKTTAFLLVNDIQVAV 454
Score = 51.5 bits (106), Expect(2) = 8e-038
Identities = 27/69 (39%), Positives = 36/69 (52%)
Frame = -3 / +2
Query: 383 LAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEAT 204
+ VAV + +GIV EEV R L+E + G+ R+R + AK A+ EGG S
Sbjct: 440 IQVAVGTHKGADGIVRKEEVEKAARELMEGEVGKKRRERAKELKQSAKAAVAEGGSSFHA 619
Query: 203 LTGLVDEWK 177
L LV WK
Sbjct: 620 LQALVALWK 646
>gb|CF394807.1|CF394807 RTDS2_7_F05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_7_F05_A021 5', mRNA sequence
Length = 731
Score = 125 bits (268), Expect(2) = 8e-038
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = -3 / +3
Query: 623 PDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMV 444
P+L LLP GF RTKDRGLVV SWAPQ +LAH S GG ++ CGWNSVLE+V GVP++
Sbjct: 204 PELRTLLPPGFEQRTKDRGLVVTSWAPQVAILAHPSTGGIISQCGWNSVLESVSHGVPII 383
Query: 443 AWPLYAEQRLNRVFLEKEMQLAV 375
WPL+AEQ+ L ++Q+AV
Sbjct: 384 TWPLHAEQKTTAFLLVNDIQVAV 452
Score = 51.5 bits (106), Expect(2) = 8e-038
Identities = 27/69 (39%), Positives = 36/69 (52%)
Frame = -3 / +3
Query: 383 LAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEAT 204
+ VAV + +GIV EEV R L+E + G+ R+R + AK A+ EGG S
Sbjct: 438 IQVAVGTHKGADGIVRKEEVEKAARELMEGEVGKKRRERAKELKQSAKAAVAEGGSSFHA 617
Query: 203 LTGLVDEWK 177
L LV WK
Sbjct: 618 LQALVALWK 644
>gb|CO363008.1|CO363008 RTK1_7_C07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_C07_A029 3', mRNA sequence
Length = 723
Score = 132 bits (282), Expect(2) = 2e-037
Identities = 48/81 (59%), Positives = 64/81 (79%)
Frame = -3 / +3
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLPEGF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM
Sbjct: 3 ETEISQLLPEGFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPM 182
Query: 446 VAWPLYAEQRLNRVFLEKEMQ 384
+ WPL+AEQ++NR+ L E++
Sbjct: 183 ICWPLFAEQKMNRILLVDELK 245
Score = 44.1 bits (90), Expect(2) = 2e-037
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = -3 / +2
Query: 377 VAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEATLT 198
V + +G V EV VR L+E + G +R R A +L EGG S +
Sbjct: 245 VGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYKGMA 424
Query: 197 GLVDEWKRI*RGTWGL 150
V EW I + G+
Sbjct: 425 AAVSEWTTITANSEGI 472
>gb|CO162822.1|CO162822 FLD1_37_F01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_37_F01_A029 5', mRNA sequence
Length = 858
Score = 134 bits (288), Expect(2) = 2e-037
Identities = 49/81 (60%), Positives = 65/81 (80%)
Frame = -3 / +2
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
+LPEGF RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM+AWPL+
Sbjct: 491 VLPEGFETRTEDRGLVVDSWAPQIGVLSHPSTGGFLSHCGWNSTIESILHGVPMIAWPLF 670
Query: 428 AEQRLNRVFLEKEMQLAVAVE 366
AEQR+N L KEM++ + +
Sbjct: 671 AEQRMNAFLLVKEMKVGIEAQ 733
Score = 40.9 bits (83), Expect(2) = 2e-037
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3 / +2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKD 237
++ V +E +G+V EEV R ++E DGG ++KR M +A+D
Sbjct: 707 EMKVGIEAQKGADGLVKREEVERAAREVMEGDGGMEMKKRMEELMGKARD 856
>gb|DR682869.1|DR682869 EST1072944 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC77, mRNA sequence
Length = 869
Score = 121 bits (258), Expect(2) = 5e-037
Identities = 48/83 (57%), Positives = 60/83 (72%)
Frame = -3 / -3
Query: 623 PDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMV 444
P+L LL GF RTKDRGLVV SWAPQ +LAH S GG ++ CGWNSVLE+V GVP++
Sbjct: 858 PELRTLLLPGFEQRTKDRGLVVTSWAPQVAILAHPSTGGIISQCGWNSVLESVSHGVPII 679
Query: 443 AWPLYAEQRLNRVFLEKEMQLAV 375
WPL+AEQ+ L ++Q+AV
Sbjct: 678 TWPLHAEQKTTAFLLVNDIQVAV 610
Score = 53.3 bits (110), Expect(2) = 5e-037
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = -3 / -3
Query: 383 LAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEAT 204
+ VAV + +GIV EEV VR L+E + G+ R+R + AK A+ EGG S
Sbjct: 624 IQVAVGTHKGADGIVRKEEVEKAVRELMEGEVGKKRRERAKELKQSAKAAVAEGGSSFHA 445
Query: 203 LTGLVDEWK 177
L LV WK
Sbjct: 444 LQALVALWK 418
>gb|DR057656.1|DR057656 RTNIT1_7_C03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_7_C03_A029 3', mRNA sequence
Length = 788
Score = 122 bits (262), Expect(2) = 6e-035
Identities = 44/75 (58%), Positives = 59/75 (78%)
Frame = -3 / +1
Query: 599 EGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQ 420
EGF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM+ WPL+AEQ
Sbjct: 1 EGFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQ 180
Query: 419 RLNRVFLEKEMQLAV 375
++NR+ L E ++ +
Sbjct: 181 KMNRILLVDEFKVGI 225
Score = 44.6 bits (91), Expect(2) = 6e-035
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3 / +1
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + +G V EV VR L+E + G +R R A +L EGG S
Sbjct: 208 EFKVGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYK 387
Query: 206 TLTGLVDEWKRI*RGTWGL 150
+ V EW I + G+
Sbjct: 388 GMAAAVSEWTTITANSEGI 444
>gb|CF473082.1|CF473082 RTDS1_1_H08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_1_H08_A015 5', mRNA sequence
Length = 704
Score = 94.5 bits (200), Expect(3) = 1e-034
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = -3 / +2
Query: 545 PQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFLEKEMQLAV 375
PQ VL+H S GGF++HCGWNS +E++ GVPM+AWPL+AEQR N L KEM++A+
Sbjct: 200 PQIGVLSHPSTGGFLSHCGWNSSIESISHGVPMIAWPLFAEQRTNAFLLVKEMKVAI 370
Score = 46.9 bits (96), Expect(3) = 1e-034
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = -3 / +2
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
++ VA+E +G+V EEV R L++ + G ++K M +A+ A+ EGG S
Sbjct: 353 EMKVAIEAKKGADGLVKREEVERAARELMKGEVGMEMKKVMGEMMGKARFAMAEGGSSYN 532
Query: 206 TLTGLVDEWKRI 171
L + WK +
Sbjct: 533 ALANVASVWKEM 568
Score = 43.2 bits (88), Expect(3) = 1e-034
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / +3
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWA 546
E D+ +LPEGF RT+DRG VV SWA
Sbjct: 120 EADMREVLPEGFETRTQDRGFVVDSWA 200
>gb|DR057313.1|DR057313 RTNIT1_5_C03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_5_C03_A029 3', mRNA sequence
Length = 787
Score = 120 bits (257), Expect(2) = 3e-034
Identities = 43/74 (58%), Positives = 58/74 (78%)
Frame = -3 / +3
Query: 596 GFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQR 417
GF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM+ WPL+AEQ+
Sbjct: 3 GFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQK 182
Query: 416 LNRVFLEKEMQLAV 375
+NR+ L E ++ +
Sbjct: 183 MNRILLVDEFKVGI 224
Score = 44.6 bits (91), Expect(2) = 3e-034
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3 / +3
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + +G V EV VR L+E + G +R R A +L EGG S
Sbjct: 207 EFKVGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYK 386
Query: 206 TLTGLVDEWKRI*RGTWGL 150
+ V EW I + G+
Sbjct: 387 GMAAAVSEWTTITANSEGI 443
>gb|DR160776.1|DR160776 RTFE1_8_B03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_8_B03_A029 3', mRNA sequence
Length = 782
Score = 120 bits (257), Expect(2) = 3e-034
Identities = 43/74 (58%), Positives = 58/74 (78%)
Frame = -3 / +3
Query: 596 GFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQR 417
GF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM+ WPL+AEQ+
Sbjct: 3 GFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQK 182
Query: 416 LNRVFLEKEMQLAV 375
+NR+ L E ++ +
Sbjct: 183 MNRILLVDEFKVGI 224
Score = 44.6 bits (91), Expect(2) = 3e-034
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3 / +3
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
+ V + +G V EV VR L+E + G +R R A +L EGG S
Sbjct: 207 EFKVGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYK 386
Query: 206 TLTGLVDEWKRI*RGTWGL 150
+ V EW I + G+
Sbjct: 387 GMAAAVSEWTTITANSEGI 443
>gb|BX680435.1|BX680435 BX680435 RS Pinus pinaster cDNA clone RS43D10, mRNA sequence
Length = 610
Score = 143 bits (306), Expect = 1e-033
Identities = 52/84 (61%), Positives = 70/84 (83%)
Frame = -3 / +2
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E D+ LLPEGF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM
Sbjct: 293 EADISHLLPEGFESRTRDRGLVVPSWAPQIPVLSHPSTGGFLSHCGWNSSIESILHGVPM 472
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+AWP++AEQR+N +FL +E Q+A+
Sbjct: 473 IAWPIFAEQRMNAIFLVEEKQVAI 544
>gb|DR057552.1|DR057552 RTNIT1_6_A10.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_A10_A029 5', mRNA sequence
Length = 812
Score = 140 bits (300), Expect = 1e-032
Identities = 52/92 (56%), Positives = 71/92 (77%)
Frame = -3 / +3
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLPEGF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS LE++ GVP+
Sbjct: 291 ETEISQLLPEGFESRTRDRGLVVASWAPQIHVLSHPSTGGFLSHCGWNSALESISHGVPI 470
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAVAVEGYDSD 351
+ WPL+AEQ++NR+ L KE ++A+A + D
Sbjct: 471 ICWPLFAEQKINRLLLIKEFKVAIAAKMESDD 566
>gb|CO369926.1|CO369926 RTK1_55_G02.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_G02_A029 3', mRNA sequence
Length = 615
Score = 138 bits (296), Expect = 3e-032
Identities = 56/131 (42%), Positives = 79/131 (60%)
Frame = -3 / +2
Query: 575 DRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFLE 396
++G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 44 EQGFIILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVV 223
Query: 395 KEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGE 216
E+Q+A+ +V E+V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 224 DEIQIAIEAPQRIDQNWLVTREDVQRIVKALMAEEEGKKLRERVRELKAAARAAVAEGGS 403
Query: 215 SEATLTGLVDE 183
S A L LV E
Sbjct: 404 SHANLDLLVSE 436
>gb|DR088632.1|DR088632 RTAL1_3_G06.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_3_G06_A029 3', mRNA sequence
Length = 525
Score = 138 bits (295), Expect = 5e-032
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = -3 / -2
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E D+ LLPEGF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM
Sbjct: 305 EADISHLLPEGFESRTRDRGLVVPSWAPQIPVLSHPSTGGFLSHCGWNSSIESILHGVPM 126
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+AWP++ EQR+N +FL + Q+A+
Sbjct: 125 IAWPIFGEQRMNAIFLVEANQVAI 54
>gb|DT638838.1|DT638838 EST1153769 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHK08 3' end, mRNA sequence
Length = 743
Score = 138 bits (295), Expect = 5e-032
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E D+ LLPEGF +RT+DRGLVV SWAPQ VL+H S GGF++HCGWNS +E+++ GVPM
Sbjct: 402 EADISHLLPEGFESRTRDRGLVVPSWAPQIPVLSHPSTGGFLSHCGWNSSIESILHGVPM 581
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+AWP++ EQR+N +FL + Q+A+
Sbjct: 582 IAWPIFGEQRMNAIFLVEANQVAI 653
>gb|DR018056.1|DR018056 STRS1_20_E09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_E09_A034 3', mRNA sequence
Length = 607
Score = 136 bits (292), Expect = 1e-031
Identities = 55/131 (41%), Positives = 78/131 (59%)
Frame = -3 / +3
Query: 575 DRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFLE 396
++G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 30 EQGFIILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVV 209
Query: 395 KEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGE 216
E+Q+A+ +V E+V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 210 DEIQIAIEAPQRIDQNWLVTREDVQRIVKALMAEEEGKKLRERVRELKAAARAAVAEGGS 389
Query: 215 SEATLTGLVDE 183
S A L V E
Sbjct: 390 SHANLDLFVSE 422
>gb|DR388213.1|DR388213 RTHG1_26_G06.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_26_G06_A029 5', mRNA sequence
Length = 656
Score = 136 bits (291), Expect = 2e-031
Identities = 55/131 (41%), Positives = 78/131 (59%)
Frame = -3 / -3
Query: 575 DRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFLE 396
++G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 618 EQGFIILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVV 439
Query: 395 KEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGE 216
E+Q+A+ +V E+V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 438 DEIQIAIEAPQRIDQNWLVTREDVQRIVKALMVEEEGKKLRERVRELKAAARAAVAEGGS 259
Query: 215 SEATLTGLVDE 183
S A L V E
Sbjct: 258 SHANLDLFVSE 226
>gb|DR015214.1|DR015214 STRS1_2_D11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_D11_A034 3', mRNA sequence
Length = 839
Score = 135 bits (289), Expect = 3e-031
Identities = 55/131 (41%), Positives = 77/131 (58%)
Frame = -3 / +1
Query: 575 DRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFLE 396
++G ++ WAPQ +LAH + GGF+ HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 265 EQGFIILGWAPQLSILAHPATGGFLFHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVV 444
Query: 395 KEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGE 216
E+Q+A+ +V E+V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 445 DEIQIAIEAPQRIDQNWLVTREDVQRIVKALMAEEEGKKLRERVRELKAAARAAVAEGGS 624
Query: 215 SEATLTGLVDE 183
S A L V E
Sbjct: 625 SHANLDLFVSE 657
>gb|DR021519.1|DR021519 STRS1_45_E08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_45_E08_A034 3', mRNA sequence
Length = 820
Score = 134 bits (288), Expect = 4e-031
Identities = 55/130 (42%), Positives = 76/130 (58%)
Frame = -3 / +2
Query: 572 RGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFLEK 393
+G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 254 QGFIILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVD 433
Query: 392 EMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGES 213
E+Q+A+ +V E+V V+ L+ + G LR+R A+ A+ EGG S
Sbjct: 434 EIQIAIEAPQRIDQNWLVTREDVQRIVKALMAEEEGNKLRERVRELKAAARAAVAEGGSS 613
Query: 212 EATLTGLVDE 183
A L V E
Sbjct: 614 HANLDLFVSE 643
>gb|CX712559.1|CX712559 RTPQ1_3_F09.b2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_3_F09_A032 3', mRNA sequence
Length = 794
Score = 133 bits (286), Expect = 8e-031
Identities = 55/132 (41%), Positives = 77/132 (58%)
Frame = -3 / +1
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G+++ WAPQ +L H S GGF++HCGWN+VLEA+ +PM+AWPLYAEQ N F+
Sbjct: 343 KKQGIIILDWAPQLSILGHPSTGGFLSHCGWNAVLEAMTMTLPMIAWPLYAEQHFNTKFV 522
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + GR LRKR AK A+ EGG
Sbjct: 523 VDEIQIALEAPQKVDQNWLVTRDDVERIVKALMAEEKGRELRKRVTELREAAKAAVAEGG 702
Query: 218 ESEATLTGLVDE 183
S V E
Sbjct: 703 SSHRNFDIFVSE 738
>gb|BX249954.1|BX249954 BX249954 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP030F11, mRNA sequence
Length = 673
Score = 133 bits (285), Expect = 1e-030
Identities = 55/132 (41%), Positives = 76/132 (57%)
Frame = -3 / +1
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G+++ WA Q +L H S GGF++HCGWN+VLEA+ VPM+AWPLYAEQ N F+
Sbjct: 115 KKQGIIILGWASQLSILGHPSTGGFLSHCGWNAVLEAMTMAVPMIAWPLYAEQHFNTKFV 294
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + GR LRKR AK A+ EGG
Sbjct: 295 VDEIQIALEAPQRVDQNWLVTRDDVETIVKALMSEEKGRELRKRVTELREAAKAAVAEGG 474
Query: 218 ESEATLTGLVDE 183
S V E
Sbjct: 475 SSHRNFDLFVSE 510
>gb|CF393653.1|CF393653 RTDR3_15_B07.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_B07_A022 5', mRNA
sequence
Length = 778
Score = 133 bits (284), Expect = 2e-030
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = -3 / +1
Query: 608 LLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLY 429
LLPEGF RT+D+GLVV SWAPQ VL+H S GGF+ HCGWNS LE++ GVPM+AWPL+
Sbjct: 508 LLPEGFEIRTRDQGLVVPSWAPQIPVLSHPSTGGFLCHCGWNSTLESISHGVPMIAWPLF 687
Query: 428 AEQRLNRVFLEKEMQLAV 375
AEQR+N+ L E Q+A+
Sbjct: 688 AEQRMNKFLLVNEFQVAI 741
>gb|CF478552.1|CF478552 RTWW3_20_C12.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_20_C12_A022 5', mRNA sequence
Length = 723
Score = 132 bits (283), Expect = 2e-030
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -3 / +2
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E ++ LLPEGF +RT+DRGLVV SWAPQ VL+H S GF++HCGWNS LE++ GVPM
Sbjct: 365 ETEISQLLPEGFESRTQDRGLVVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPM 544
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAV 375
+ WPL+AEQ++NR+ L E ++ +
Sbjct: 545 ICWPLFAEQKMNRILLIDEFKVGI 616
>gb|BQ106995.1|BQ106995 NXLV085_C09_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV085_C09 5' similar to Arabidopsis thaliana
sequence At3g16520 glucosyltransferase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 638
Score = 130 bits (278), Expect = 1e-029
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = -3 / +1
Query: 626 EPDLDALLPEGFLARTKDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPM 447
E DL LLPEGF ++ +DRGLVV SW PQ VL+H S+GGF+ HCGWNS L ++ GVPM
Sbjct: 310 ETDLSQLLPEGFQSQNRDRGLVVPSWVPQVPVLSHPSIGGFLCHCGWNSTLXSISHGVPM 489
Query: 446 VAWPLYAEQRLNRVFLEKEMQLAVAVE 366
+ WPL+AEQRLN+ L E ++ E
Sbjct: 490 ITWPLFAEQRLNKFLLVNEFKVXXETE 570
>gb|CF385981.1|CF385981 RTDR1_7_E07.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_7_E07_A015 5', mRNA
sequence
Length = 732
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +2
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 194 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 373
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 374 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 553
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 554 SSAKNLDLFVSE 589
>gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_C11_A029 5', mRNA sequence
Length = 801
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +1
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 226 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 405
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 406 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 585
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 586 SSAKNLDLFVSE 621
>gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_E11_A029 5', mRNA sequence
Length = 820
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +1
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 328 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 507
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 508 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 687
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 688 SSAKNLDLFVSE 723
>gb|CX645779.1|CX645779 COLD1_5_F07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_5_F07_A029 3', mRNA sequence
Length = 815
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +1
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 175 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 354
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 355 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 534
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 535 SSAKNLDLFVSE 570
>gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_F11_A034 3', mRNA sequence
Length = 792
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +3
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 258 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 437
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 438 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 617
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 618 SSAKNLDLFVSE 653
>gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_F11_A034 5', mRNA sequence
Length = 835
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +3
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 315 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 494
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 495 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 674
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 675 SSAKNLDLFVSE 710
>gb|DR049066.1|DR049066 RTBOR1_13_C03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_13_C03_A029 3', mRNA sequence
Length = 827
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +3
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 75 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 254
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 255 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 434
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 435 SSAKNLDLFVSE 470
>gb|DR051169.1|DR051169 RTBOR1_28_D06.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_28_D06_A029 3', mRNA sequence
Length = 695
Score = 130 bits (278), Expect = 1e-029
Identities = 54/132 (40%), Positives = 77/132 (58%)
Frame = -3 / +2
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 41 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFV 220
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V ++V V+ L+ + G+ LR+R A+ A+ EGG
Sbjct: 221 VDEIQIALEAPQRIDQNWLVTRDDVERIVKLLMMEEKGQELRERVRELKAVARAAVAEGG 400
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 401 SSAKNLDLFVSE 436
>gb|DR057749.1|DR057749 RTNIT1_7_C12.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_7_C12_A029 5', mRNA sequence
Length = 818
Score = 102 bits (217), Expect(2) = 2e-029
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = -3 / -3
Query: 551 WAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFLEKEMQLAV 375
WAPQ VL+H S GGF++HCGWNS +E++ GVPM+AWPL+AEQR N L KEM++A+
Sbjct: 816 WAPQIGVLSHPSTGGFLSHCGWNSTIESISHGVPMIAWPLFAEQRTNAFLLVKEMKVAI 640
Score = 46.9 bits (96), Expect(2) = 2e-029
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = -3 / -3
Query: 386 QLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGGESEA 207
++ VA+E +G+V EEV R L++ + G ++K M +A+ A+ EGG S
Sbjct: 657 EMKVAIEAKKGADGLVKREEVERAARELMKGEVGMEMKKGMGELMGKARFAMAEGGSSYN 478
Query: 206 TLTGLVDEWK 177
L + WK
Sbjct: 477 ALANVASVWK 448
>gb|CF474107.1|CF474107 RTWW2_18_C05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_18_C05_A021 5', mRNA sequence
Length = 817
Score = 129 bits (276), Expect = 2e-029
Identities = 54/132 (40%), Positives = 76/132 (57%)
Frame = -3 / +3
Query: 578 KDRGLVVRSWAPQRDVLAHASVGGFVTHCGWNSVLEAVMAGVPMVAWPLYAEQRLNRVFL 399
K +G ++ WAPQ +LAH + GGF++HCGWN+VLE GVPM+AWPLYAEQ N F+
Sbjct: 276 KKQGFIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFV 455
Query: 398 EKEMQLAVAVEGYDSDEGIVAAEEVAAKVRWLLESDGGRMLRKRTLAAMRQAKDALREGG 219
E+Q+A+ +V E+V V+ L+ + G+ LR+R + A+ EGG
Sbjct: 456 VDEIQIALEAPQRIDLNWLVTREDVERIVKMLMMEETGQELRERVGELKTAVRAAVAEGG 635
Query: 218 ESEATLTGLVDE 183
S L V E
Sbjct: 636 SSTKNLNLFVSE 671
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 267,361,428
Number of Sequences: 355925
Number of extensions: 3685929
Number of successful extensions: 38758
Number of sequences better than 1.0e-020: 207
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8575224060
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)