TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591248.2.1
(1222 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U76725.1|PRU76725 Pinus radiata endo-beta-1,4-glucanase ... 200 e-109
gb|U76756.1|PRU76756 Pinus radiata endo-beta-1,4-glucanase ... 193 e-102
gb|CO363825.1|CO363825 RTK1_12_B11.b1_A029 Roots minus pota... 191 4e-090
gb|CO173387.1|CO173387 NDL1_35_G08.g1_A029 Needles control ... 189 2e-088
gb|DR100137.1|DR100137 STRR1_62_B04.b1_A033 Stem Response R... 169 2e-088
gb|DR020177.1|DR020177 STRS1_35_D09.b1_A034 Shoot tip pitch... 171 3e-086
gb|DR072431.1|DR072431 RTDK1_26_F03.b1_A029 Roots, dark Pin... 218 9e-084
gb|DR019067.1|DR019067 STRS1_27_D02.g1_A034 Shoot tip pitch... 160 6e-083
gb|DR019056.1|DR019056 STRS1_27_C02.g1_A034 Shoot tip pitch... 160 6e-083
gb|DR072072.1|DR072072 RTDK1_23_H10.g1_A029 Roots, dark Pin... 149 3e-077
gb|CF668810.1|CF668810 RTCNT1_38_G04.g1_A029 Root control P... 191 4e-076
gb|CO172882.1|CO172882 NDL1_32_B09.g1_A029 Needles control ... 191 5e-075
gb|DR179224.1|DR179224 RTMNUT1_16_F11.g1_A029 Roots minus m... 219 4e-068
gb|DR163085.1|DR163085 RTFE1_24_H02.g1_A029 Roots minus iro... 94 7e-062
gb|DR014982.1|DR014982 HEAT1_52_F11.g1_A029 Root at 37 C fo... 191 1e-061
gb|DR013159.1|DR013159 HEAT1_17_H11.b1_A029 Root at 37 C fo... 219 2e-061
gb|DR070111.1|DR070111 RTDK1_11_G12.b1_A029 Roots, dark Pin... 95 2e-058
gb|DR179146.1|DR179146 RTMNUT1_16_F11.b1_A029 Roots minus m... 219 7e-058
gb|DR099637.1|DR099637 STRR1_57_B05.b1_A033 Stem Response R... 191 1e-057
gb|DR057721.1|DR057721 RTNIT1_7_A06.g1_A029 Roots minus nit... 191 3e-057
gb|BF516953.1|BF516953 NXSI_007_C11_F NXSI (Nsf Xylem Side ... 185 3e-056
gb|BG040101.1|BG040101 NXSI_106_E02_F NXSI (Nsf Xylem Side ... 150 3e-055
gb|CO365142.1|CO365142 RTK1_23_H06.g1_A029 Roots minus pota... 183 6e-055
gb|DR161544.1|DR161544 RTFE1_12_A09.g1_A029 Roots minus iro... 183 6e-055
gb|DR099221.1|DR099221 STRR1_54_B05.b1_A033 Stem Response R... 176 1e-054
gb|CO365053.1|CO365053 RTK1_23_H06.b1_A029 Roots minus pota... 171 3e-051
gb|DR167697.1|DR167697 RTPHOS1_20_B02.g1_A029 Roots minus p... 168 3e-050
gb|CO363908.1|CO363908 RTK1_12_B11.g1_A029 Roots minus pota... 167 3e-050
gb|DR101611.1|DR101611 STRR1_74_C04.g1_A033 Stem Response R... 167 3e-050
gb|DR072510.1|DR072510 RTDK1_26_F03.g1_A029 Roots, dark Pin... 198 6e-050
gb|CF479673.1|CF479673 RTWW3_11_E04.g1_A022 Well-watered lo... 95 2e-049
gb|DR018974.1|DR018974 STRS1_27_C02.b1_A034 Shoot tip pitch... 164 4e-049
gb|DR018984.1|DR018984 STRS1_27_D02.b1_A034 Shoot tip pitch... 164 4e-049
gb|DT636766.1|DT636766 EST1151697 Normalized pine embryo li... 118 3e-047
gb|CO370530.1|CO370530 RTK1_68_B06.g1_A029 Roots minus pota... 156 2e-046
gb|DR020253.1|DR020253 STRS1_35_D09.g1_A034 Shoot tip pitch... 154 4e-046
gb|DR691236.1|DR691236 EST1081322 Normalized pine embryo li... 113 8e-046
gb|DR167624.1|DR167624 RTPHOS1_20_B02.b1_A029 Roots minus p... 147 5e-044
gb|DR161469.1|DR161469 RTFE1_12_A09.b1_A029 Roots minus iro... 146 9e-044
gb|CF663920.1|CF663920 RTCNT1_6_B08.b1_A029 Root control Pi... 146 9e-044
gb|DR070193.1|DR070193 RTDK1_11_G12.g1_A029 Roots, dark Pin... 146 9e-044
gb|DR695212.1|DR695212 EST1085305 Normalized pine embryo li... 175 7e-043
gb|CF476183.1|CF476183 RTWW2_21_G10.g1_A021 Well-watered lo... 113 7e-043
gb|CX715048.1|CX715048 RTPQ1_30_B02.g1_A032 Roots treated w... 115 2e-042
gb|CO176214.1|CO176214 NDL1_60_C02.g1_A029 Needles control ... 160 2e-042
gb|CO198819.1|CO198819 GEO1_16_G05.g1_A029 Root gravitropis... 138 1e-041
gb|BQ702998.1|BQ702998 NXSI_135_B07_F NXSI (Nsf Xylem Side ... 95 1e-040
gb|CO368326.1|CO368326 RTK1_40_A07.b1_A029 Roots minus pota... 135 6e-040
gb|CF672997.1|CF672997 RTCNT1_75_H01.b1_A029 Root control P... 99 2e-039
gb|AW056501.1|AW056501 ST52F03 Pine TriplEx shoot tip libra... 100 1e-037
gb|DR683696.1|DR683696 EST1073772 Normalized pine embryo li... 155 8e-037
gb|DT631580.1|DT631580 EST1146511 Normalized pine embryo li... 155 8e-037
gb|CO368436.1|CO368436 RTK1_40_D07.g1_A029 Roots minus pota... 151 1e-035
gb|BF220811.1|BF220811 NXCI_154_B06_F NXCI (Nsf Xylem Compr... 103 1e-035
gb|BF060615.1|BF060615 NXCI_118_B03_F NXCI (Nsf Xylem Compr... 135 1e-035
gb|BQ701766.1|BQ701766 NXSI_120_D02_F NXSI (Nsf Xylem Side ... 150 2e-035
gb|AW226414.1|AW226414 ST82A10 Pine TriplEx shoot tip libra... 95 2e-035
gb|CF663991.1|CF663991 RTCNT1_6_B08.g1_A029 Root control Pi... 93 7e-035
gb|DR683407.1|DR683407 EST1073483 Normalized pine embryo li... 145 5e-034
gb|DR095654.1|DR095654 STRR1_22_E06.g1_A033 Stem Response R... 73 5e-034
gb|CO197695.1|CO197695 GEO1_8_H01.b1_A029 Root gravitropism... 111 2e-033
gb|BE187293.1|BE187293 NXNV_162_B08_F Nsf Xylem Normal wood... 143 3e-033
gb|CF673071.1|CF673071 RTCNT1_75_H01.g1_A029 Root control P... 139 3e-032
gb|BQ702952.1|BQ702952 NXSI_134_F04_F NXSI (Nsf Xylem Side ... 105 1e-031
gb|CF668728.1|CF668728 RTCNT1_38_G04.b1_A029 Root control P... 79 4e-031
gb|DR072289.1|DR072289 RTDK1_25_G01.b1_A029 Roots, dark Pin... 103 6e-031
gb|DR167508.1|DR167508 RTPHOS1_19_F11.b1_A029 Roots minus p... 76 2e-030
gb|BF610412.1|BF610412 NXSI_058_D03_F NXSI (Nsf Xylem Side ... 102 6e-030
gb|CV035007.1|CV035007 RTNACL1_13_B12.b1_A029 Roots plus ad... 131 1e-029
gb|DR167591.1|DR167591 RTPHOS1_19_F11.g1_A029 Roots minus p... 76 7e-027
gb|BF060520.1|BF060520 NXCI_116_A05_F NXCI (Nsf Xylem Compr... 79 9e-027
gb|BQ699374.1|BQ699374 NXRV126_H08_F NXRV (Nsf Xylem Root w... 73 4e-026
gb|AA220893.1|AA220893 8 Pinus radiata somatic embryogenic ... 117 1e-025
gb|CO172809.1|CO172809 NDL1_32_B09.b1_A029 Needles control ... 71 1e-025
gb|BF778276.1|BF778276 NXSI_082_E03_F NXSI (Nsf Xylem Side ... 82 3e-025
gb|BM367436.1|BM367436 NXLV_049_B10_F NXLV (Nsf Xylem Late ... 70 1e-023
gb|BM133366.1|BM133366 NXLV_004_H12_F NXLV (Nsf Xylem Late ... 70 1e-023
gb|CV032797.1|CV032797 RTNACL1_18_H11.b1_A029 Roots plus ad... 74 3e-023
gb|DR048217.1|DR048217 RTBOR1_7_G09.b2_A029 Roots plus adde... 77 4e-023
gb|DR072362.1|DR072362 RTDK1_25_G01.g1_A029 Roots, dark Pin... 76 7e-023
gb|BX678371.1|BX678371 BX678371 RS Pinus pinaster cDNA clon... 70 2e-022
gb|AW870233.1|AW870233 NXNV_125_H06_F Nsf Xylem Normal wood... 76 6e-022
gb|DR744307.1|DR744307 RTCU1_21_D02.g1_A029 Roots plus adde... 77 8e-021
gb|DR096991.1|DR096991 STRR1_31_E11.g1_A033 Stem Response R... 77 8e-021
gb|DR078499.1|DR078499 RTFEPL1_5_C10.b1_A029 Roots plus add... 77 8e-021
gb|DR169132.1|DR169132 RTPHOS1_30_F09.b1_A029 Roots minus p... 77 8e-021
gb|CX652902.1|CX652902 COLD1_62_E09.b1_A029 Root cold Pinus... 77 8e-021
gb|CF479877.1|CF479877 RTWW3_12_D09.g1_A022 Well-watered lo... 77 8e-021
gb|BG625807.1|BG625807 NXPV_066_C10_F NXPV (Nsf Xylem Plani... 77 8e-021
gb|BQ698529.1|BQ698529 NXPV_071_A11_F NXPV (Nsf Xylem Plani... 77 8e-021
>gb|U76725.1|PRU76725 Pinus radiata endo-beta-1,4-glucanase (PrCel1) mRNA, complete cds
Length = 1928
Score = 200 bits (432), Expect(4) = e-109
Identities = 82/134 (61%), Positives = 100/134 (74%)
Frame = -1 / +2
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
++ Q +Y+PGGLL+ + SN+Q+VT SFLL Y+ YLS + V+CGS + SP +LR +
Sbjct: 1064 SYSQAKYTPGGLLYTLSDSNLQYVTSSSFLLFTYAKYLSSSKHVVTCGSMTFSPKRLRTI 1243
Query: 631 AKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPA 452
AKRQVDYILGDNPL+MSYMVGYG+ +P RIHHR SSLPS HP I C AG S A
Sbjct: 1244 AKRQVDYILGDNPLKMSYMVGYGSHYPERIHHRGSSLPSKGNHPQAIPCNAGFQSLYSNA 1423
Query: 451 PNPNLLVGAVVGGP 410
PNPN+LVGAVVGGP
Sbjct: 1424 PNPNILVGAVVGGP 1465
Score = 99.6 bits (211), Expect(4) = e-109
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = -1 / +2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWLHKATR Y YI+ LGA ++ N FGWDNKHAG VL+SKE L+ + +
Sbjct: 839 AWLHKATRNPTYLNYIQSKGQSLGADESDNIFGWDNKHAGARVLLSKEFLLRNVKSLHDY 1018
Query: 859 RVNADNFMCTLLPGIS 812
+ +ADN++C+LLPG+S
Sbjct: 1019 KGHADNYICSLLPGVS 1066
Score = 97.3 bits (206), Expect(4) = e-109
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR +DP YSKRL+ A+ VF+FADK+RG YS SL + VCP YC YSGY+DELL
Sbjct: 662 SLVFRKSDPQYSKRLIHTAMRVFDFADKHRGAYSDSLRSCVCPFYCSYSGYEDELL 829
Score = 65.7 bits (137), Expect(5) = 7e-034
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = +3 / -3
Query: 543 IRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASR 722
IR G P PT+YDI GLSP+M*STCR A S G +P T LR L *
Sbjct: 1332 IRSG*WEP*PTIYDILRGLSPNM*STCRFAIVLSLFGLKVIDPQVTTCLEELRYLA*VKS 1153
Query: 723 RNDSCVTCCMLLLPTLNSSPPGEY 794
+ + VT C LL ++ SPPG Y
Sbjct: 1152 KKEEDVTYCKLLSDSV*RSPPGVY 1081
Score = 56.1 bits (116), Expect(4) = e-109
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = -1 / +2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D D FPD R ++QSEPTTYINAP +G LAY +
Sbjct: 1451 VVGGPDSMDRFPDDRNDYEQSEPTTYINAPFVGSLAYLA 1567
Score = 48.3 bits (99), Expect(5) = 7e-034
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3 / -3
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSF 986
+ PGRR + LSA + +F + SF+ RT PACLLS PN L S AP+ F
Sbjct: 1065 DTPGRREQI*LSACPL*S*RDFTFRSKNSFDRRTRAPACLLSHPNILSDSSAPNDWPF 892
Score = 45.5 bits (93), Expect(5) = 7e-034
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +3 / -3
Query: 309 K*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
K*AR P GAL+YVVGSDC + R+SG S S P T
Sbjct: 1563 K*AREPTKGALIYVVGSDCS*SFRSSGNRSMLSGPPTT 1450
Score = 34.1 bits (68), Expect(5) = 7e-034
Identities = 23/51 (45%), Positives = 24/51 (47%)
Frame = +2 / -3
Query: 1067 YPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
YPE Q* G T R L* P LSA SNT A E GS R T +
Sbjct: 813 YPEYEQ*NGQTQDLRESL*APLCLSAKSNTLMAVCISLFEY*GSDLRNTSD 661
Score = 24.0 bits (46), Expect(5) = 7e-034
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 411 GPPTTAPT 434
GPPTTAPT
Sbjct: 1464 GPPTTAPT 1441
>gb|U76756.1|PRU76756 Pinus radiata endo-beta-1,4-glucanase (PrCel2) mRNA, complete cds
Length = 1950
Score = 193 bits (417), Expect(4) = e-102
Identities = 80/134 (59%), Positives = 96/134 (71%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y YL + V CG+ +P ++R +AKR
Sbjct: 1074 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYPKYLRVSKQVVRCGNMVVTPTRIRTLAKR 1253
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPLRMSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 1254 QVDYILGDNPLRMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 1433
Query: 442 NLLVGAVVGGPTDD 401
N LVGAVVGGP ++
Sbjct: 1434 NRLVGAVVGGPDNN 1475
Score = 93.2 bits (197), Expect(4) = e-102
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LG D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 840 AWLQRASRNVSYISYIQSHGQNLGGEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 1019
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 1020 RGHADNFVCSLLPGTPN 1070
Score = 92.7 bits (196), Expect(4) = e-102
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / +3
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 663 SMVFRTTDPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 830
Score = 76.7 bits (161), Expect(5) = 3e-039
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = +3 / -3
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC +G++ +R GN AP PTMYDIRSGLSP M*STC A+ R G PH T
Sbjct: 1375 GCW*IEGNDEPL*CMRSGNLAP*PTMYDIRSGLSPRM*STCLFASVRILVGVTTMFPHLT 1196
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
L+ * R VT C L L SSPPG Y
Sbjct: 1195 TCLETLKYFG*VKSRKVVDVTYCKLQSLIL*SSPPGVY 1082
Score = 55.6 bits (115), Expect(5) = 3e-039
Identities = 29/57 (50%), Positives = 31/57 (54%)
Frame = +2 / -3
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
H YPE Q* G T+ WR L* P LSA SNT A RR LE* GS TM+
Sbjct: 832 HSNSSLYPEYEQ*NGQTSDWRESL*APLCLSAKSNTCIAVCRRCLE*MGSVVLNTMD 662
Score = 51.9 bits (107), Expect(4) = e-102
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 1452 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 1568
Score = 44.6 bits (91), Expect(5) = 3e-039
Identities = 24/52 (46%), Positives = 27/52 (51%)
Frame = +3 / -3
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S P
Sbjct: 1063 VPGKREQTKLSACPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSPP 908
Score = 31.3 bits (62), Expect(5) = 3e-039
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +3 / -3
Query: 309 K*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
K*AR P GALM VVGS+ + R+S K S S P T
Sbjct: 1564 K*ARDPTKGALM*VVGSE*A*SLRSSEKWSLLSGPPTT 1451
Score = 27.6 bits (54), Expect(5) = 3e-039
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 411 GPPTTAPTSRF 443
GPPTTAPTS F
Sbjct: 1465 GPPTTAPTSLF 1433
>gb|CO363825.1|CO363825 RTK1_12_B11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_B11_A029 3', mRNA sequence
Length = 860
Score = 191 bits (412), Expect(4) = 4e-090
Identities = 79/134 (58%), Positives = 96/134 (71%)
Frame = -1 / -1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 521 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 342
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 341 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 162
Query: 442 NLLVGAVVGGPTDD 401
N LVGAVVGGP ++
Sbjct: 161 NRLVGAVVGGPDNN 120
Score = 95.0 bits (201), Expect(4) = 4e-090
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / -1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 755 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 576
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 575 RGHADNFVCSLLPGTPN 525
Score = 76.2 bits (160), Expect(5) = 4e-032
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = +3 / +1
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC +G++ +R GN AP PTMYDI SGLSPSM*STC A+ R G PH T
Sbjct: 220 GCW*IEGNDEPL*CMRSGNLAP*PTMYDIPSGLSPSM*STCLFASVRILVGVTTMFPHLT 399
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
L+ * R VT C L L SSPPG Y
Sbjct: 400 TCLETLKYFA*VKSRKVVDVTYCKLQSLIL*SSPPGVY 513
Score = 52.4 bits (108), Expect(4) = 4e-090
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -2 / -1
Query: 1134 YRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
+RG YS SL + VCP YC YSGY DELL
Sbjct: 848 HRGAYSDSLQSEVCPFYCSYSGYNDELL 765
Score = 51.9 bits (107), Expect(4) = 4e-090
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 143 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 27
Score = 46.4 bits (95), Expect(5) = 4e-032
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / +1
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 532 VPGKREQTKLSAWPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSAP 687
Score = 31.3 bits (62), Expect(5) = 4e-032
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +3 / +1
Query: 309 K*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
K*AR P GALM VVGS+ + R+S K S S P T
Sbjct: 31 K*ARDPTKGALM*VVGSE*A*SLRSSEKWSLLSGPPTT 144
Score = 29.9 bits (59), Expect(5) = 4e-032
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / +1
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GP 1129
H YPE Q* G T+ WR L* P
Sbjct: 763 HSNSSLYPEYEQ*NGQTSDWRESL*AP 843
Score = 27.6 bits (54), Expect(5) = 4e-032
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 411 GPPTTAPTSRF 443
GPPTTAPTS F
Sbjct: 130 GPPTTAPTSLF 162
>gb|CO173387.1|CO173387 NDL1_35_G08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_G08_A029 5', mRNA sequence
Length = 793
Score = 189 bits (408), Expect(3) = 2e-088
Identities = 79/130 (60%), Positives = 93/130 (71%)
Frame = -1 / +2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLLF++ SN+Q+VT +FLL Y+ YLS + V CG+ +P ++R AKR
Sbjct: 404 QAQYTPGGLLFQMSDSNLQYVTSATFLLFTYAKYLSVSKQVVKCGNMIVTPTKIRTSAKR 583
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGY A+FP RIHHR SSLPSV HP I C G S PNP
Sbjct: 584 QVDYILGDNPLGMSYMVGYSAKFPERIHHRGSSLPSVYEHPQTIACNDGFQSLYSNDPNP 763
Query: 442 NLLVGAVVGG 413
N+LVGAVVGG
Sbjct: 764 NILVGAVVGG 793
Score = 94.1 bits (199), Expect(3) = 2e-088
Identities = 37/74 (50%), Positives = 50/74 (67%)
Frame = -1 / +2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ N LGA D++N F WD KHAG VL++KEVL+ + +
Sbjct: 170 AWLERASRNVSYLNYIQSNGQSLGADDSVNIFSWDEKHAGTRVLLAKEVLVENSKTLGVY 349
Query: 859 RVNADNFMCTLLPG 818
R +ADNF+C+LLPG
Sbjct: 350 RGHADNFICSLLPG 391
Score = 90.4 bits (191), Expect(3) = 3e-031
Identities = 54/127 (42%), Positives = 62/127 (48%)
Frame = +3 / -2
Query: 414 PPTTAPTSRFXXXXXXXXXXXXXXQPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIRS 593
PPTTAPT F Q I GC+ T+G++ +R GN A PT+YDI S
Sbjct: 792 PPTTAPTRIFGLGSLLYKDWKPSLQAIVWGCSYTEGNDEPL*CMRSGNLAL*PTIYDIPS 613
Query: 594 GLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLN 773
GLSPSM*STC A R G PH T LR * R + VT C LL
Sbjct: 612 GLSPSM*STCLFAEVRILVGVTIMFPHFTTCLETLRYFA*VKSRKVADVTYCKLLSLIWK 433
Query: 774 SSPPGEY 794
S+PPG Y
Sbjct: 432 SNPPGVY 412
Score = 82.6 bits (174), Expect(3) = 2e-088
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -2 / +2
Query: 1209 FRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
FR + YS +LL+ A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 2 FRTTNRTYSDQLLETAMRVFDFADKHRGAYSDSLQSEVCPFYCSYSGYHDELL 160
Score = 46.4 bits (95), Expect(3) = 3e-031
Identities = 25/57 (43%), Positives = 28/57 (49%)
Frame = +3 / -2
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSF 986
+PG+ MKLSA F RTS RTL+PAC SQ N L S AP F
Sbjct: 393 VPGKSEQMKLSAWPLYTPSVLEFSTRTSLAKRTLVPACFSSQLNILTLSSAPRLWPF 223
Score = 37.3 bits (75), Expect(3) = 3e-031
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = +2 / -2
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSR 1174
H YPE Q* G T+ R L* P LSA SNT A SR
Sbjct: 162 HSNSS*YPEYEQ*NGQTSDCRESL*APLCLSAKSNTRIAVSR 37
>gb|DR100137.1|DR100137 STRR1_62_B04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_62_B04_A033 3', mRNA sequence
Length = 790
Score = 169 bits (364), Expect(3) = 2e-088
Identities = 68/112 (60%), Positives = 85/112 (75%)
Frame = -1 / -1
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
++ Q +Y+PGGLL+ + SN+Q+VT SFLL Y+ YLS + V+CGS + SP +LR +
Sbjct: 349 SYSQAKYTPGGLLYTLSDSNLQYVTSSSFLLFTYAKYLSSSKHVVTCGSMTFSPKRLRTI 170
Query: 631 AKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
AKRQVDYILGDNPL+MSYMVGYG+ +P RIHHR SSLPS A HP I C AG
Sbjct: 169 AKRQVDYILGDNPLKMSYMVGYGSHYPERIHHRGSSLPSKANHPQPIPCNAG 14
Score = 99.6 bits (211), Expect(3) = 2e-088
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = -1 / -1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWLHKATR Y YI+ LGA ++ N FGWDNKHAG VL+SKE L+ + +
Sbjct: 574 AWLHKATRNPTYLNYIQSKGQSLGADESDNIFGWDNKHAGARVLLSKEFLLRNVKSLHDY 395
Query: 859 RVNADNFMCTLLPGIS 812
+ +ADN++C+LLPG+S
Sbjct: 394 KGHADNYICSLLPGVS 347
Score = 97.3 bits (206), Expect(3) = 2e-088
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -2 / -1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR +DP YSKRL+ A+ VF+FADK+RG YS SL + VCP YC YSGY+DELL
Sbjct: 751 SLVFRKSDPQYSKRLIHTAMRVFDFADKHRGAYSDSLRSCVCPFYCSYSGYEDELL 584
Score = 62.9 bits (131), Expect(3) = 9e-023
Identities = 41/95 (43%), Positives = 48/95 (50%)
Frame = +3 / +3
Query: 510 ATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHETRPP 689
A +G E IR G P PTMYDI GLSP+M*ST R A S G +P T
Sbjct: 48 ALEGREEPL**IRSG*WEP*PTMYDILRGLSPNM*STWRFAIVLSLFGLKVIDPQVTTCL 227
Query: 690 AWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
LR L * + + VT C LL ++ SPPG Y
Sbjct: 228 EELRYLA*VKSKKEEDVTYCKLLSDSV*RSPPGVY 332
Score = 48.3 bits (99), Expect(3) = 9e-023
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3 / +3
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSF 986
+ PGRR + LSA + +F + SF+ RT PACLLS PN L S AP+ F
Sbjct: 348 DTPGRREQI*LSACPL*S*RDFTFRSKNSFDRRTRAPACLLSHPNILSDSSAPNDWPF 521
Score = 34.1 bits (68), Expect(3) = 9e-023
Identities = 23/51 (45%), Positives = 24/51 (47%)
Frame = +2 / +3
Query: 1067 YPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
YPE Q* G T R L* P LSA SNT A E GS R T +
Sbjct: 600 YPEYEQ*NGQTQDLRESL*APLCLSAKSNTLMAVCISLFEY*GSDLRNTSD 752
>gb|DR020177.1|DR020177 STRS1_35_D09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_35_D09_A034 3', mRNA sequence
Length = 906
Score = 171 bits (368), Expect(3) = 3e-086
Identities = 70/121 (57%), Positives = 85/121 (70%)
Frame = -1 / -1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 363 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 184
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 183 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 4
Query: 442 N 440
N
Sbjct: 3 N 1
Score = 95.0 bits (201), Expect(3) = 3e-086
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / -1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 597 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 418
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 417 RGHADNFVCSLLPGTPN 367
Score = 92.7 bits (196), Expect(3) = 3e-086
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / -1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 774 SMVFRTTDPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 607
Score = 76.2 bits (160), Expect(3) = 2e-032
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = +3 / +2
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC +G++ +R GN AP PTMYDI SGLSPSM*STC A+ R G PH T
Sbjct: 62 GCW*IEGNDEPL*CMRSGNLAP*PTMYDIPSGLSPSM*STCLFASVRILVGVTTMFPHLT 241
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
L+ * R VT C L L SSPPG Y
Sbjct: 242 TCLETLKYFA*VKSRKVVDVTYCKLQSLIL*SSPPGVY 355
Score = 55.6 bits (115), Expect(3) = 2e-032
Identities = 29/57 (50%), Positives = 31/57 (54%)
Frame = +2 / +2
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
H YPE Q* G T+ WR L* P LSA SNT A RR LE* GS TM+
Sbjct: 605 HSNSSLYPEYEQ*NGQTSDWRESL*APLCLSAKSNTCIAVCRRCLE*MGSVVLNTMD 775
Score = 46.4 bits (95), Expect(3) = 2e-032
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / +2
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 374 VPGKREQTKLSAWPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSAP 529
>gb|DR072431.1|DR072431 RTDK1_26_F03.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_26_F03_A029 3', mRNA sequence
Length = 667
Score = 218 bits (470), Expect(2) = 9e-084
Identities = 86/130 (66%), Positives = 102/130 (78%)
Frame = -1 / -2
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+ ++PGGL++K G SNMQHVT +SFLLLAY+NYL H+ V CGS +P +LR AKRQ
Sbjct: 390 VPFTPGGLIYKPGGSNMQHVTAISFLLLAYANYLGHSSEVVQCGSIQVTPSRLRTAAKRQ 211
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPN 440
VDYILGDNPL++SYMVGYG RFP+ IHHR SSLPSV HP I CK G+ ++ S PNPN
Sbjct: 210 VDYILGDNPLKLSYMVGYGPRFPQYIHHRGSSLPSVTEHPNHITCKGGSQFFFSKNPNPN 31
Query: 439 LLVGAVVGGP 410
LLVGAVVGGP
Sbjct: 30 LLVGAVVGGP 1
Score = 113 bits (242), Expect(2) = 9e-084
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWLHKAT+ Y YI+ N LGA + INEFGWDNKHAGINVL+SKE L+GK Q++
Sbjct: 627 AWLHKATKNHSYINYIQINGKTLGADENINEFGWDNKHAGINVLVSKEFLLGKVASLQTY 448
Query: 859 RVNADNFMCTLLPGISN 809
R AD+F+C+L+P S+
Sbjct: 447 RGYADDFICSLIPETSD 397
Score = 100 bits (213), Expect(3) = 6e-039
Identities = 51/96 (53%), Positives = 57/96 (59%)
Frame = +3 / +2
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC+ T+G++ I G R PYPTMY+ GLSPSM*ST RLA S G PH T
Sbjct: 92 GCSVTEGNDEPL**IYWGKRGPYPTMYESFRGLSPSM*STWRLAAVLSLEGVTWMLPH*T 271
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPG 788
W +*L *A RND VTCCMLL P L SPPG
Sbjct: 272 TSEEWPK*LA*AKSRNDMAVTCCMLLPPGL*ISPPG 379
Score = 71.2 bits (149), Expect(3) = 6e-039
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +3 / +2
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLL 992
++ G R MK SA K ++FP + S + RT +PACLLSQPNSLM S APS F+
Sbjct: 401 DVSGMREQMKSSAYPL*VCKEATFPSKNSLDTRTFIPACLLSQPNSLMFSSAPSVLPFI* 580
Query: 993 MYSRYSRRRVALCSHAKKNTAA 1058
M Y VALC+ A ++++
Sbjct: 581 M*LIYEWFFVALCNQAAPHSSS 646
Score = 28.6 bits (56), Expect(3) = 6e-039
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 411 GPPTTAPTSRF 443
GPPTTAPT RF
Sbjct: 2 GPPTTAPTRRF 34
>gb|DR019067.1|DR019067 STRS1_27_D02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_D02_A034 5', mRNA sequence
Length = 845
Score = 160 bits (344), Expect(3) = 6e-083
Identities = 64/109 (58%), Positives = 79/109 (72%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 493 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 672
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G
Sbjct: 673 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDG 819
Score = 95.0 bits (201), Expect(3) = 6e-083
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 259 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 438
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 439 RGHADNFVCSLLPGTPN 489
Score = 92.7 bits (196), Expect(3) = 6e-083
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / +1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 82 SMVFRTTDPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 249
Score = 76.2 bits (160), Expect(3) = 2e-032
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = +3 / -1
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC +G++ +R GN AP PTMYDI SGLSPSM*STC A+ R G PH T
Sbjct: 794 GCW*IEGNDEPL*CMRSGNLAP*PTMYDIPSGLSPSM*STCLFASVRILVGVTTMFPHLT 615
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
L+ * R VT C L L SSPPG Y
Sbjct: 614 TCLETLKYFA*VKSRKVVDVTYCKLQSLIL*SSPPGVY 501
Score = 55.6 bits (115), Expect(3) = 2e-032
Identities = 29/57 (50%), Positives = 31/57 (54%)
Frame = +2 / -1
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
H YPE Q* G T+ WR L* P LSA SNT A RR LE* GS TM+
Sbjct: 251 HSNSSLYPEYEQ*NGQTSDWRESL*APLCLSAKSNTCIAVCRRCLE*MGSVVLNTMD 81
Score = 46.4 bits (95), Expect(3) = 2e-032
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / -1
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 482 VPGKREQTKLSAWPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSAP 327
>gb|DR019056.1|DR019056 STRS1_27_C02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_C02_A034 5', mRNA sequence
Length = 823
Score = 160 bits (344), Expect(3) = 6e-083
Identities = 64/109 (58%), Positives = 79/109 (72%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 492 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 671
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G
Sbjct: 672 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDG 818
Score = 95.0 bits (201), Expect(3) = 6e-083
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 258 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 437
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 438 RGHADNFVCSLLPGTPN 488
Score = 92.7 bits (196), Expect(3) = 6e-083
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / +3
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 81 SMVFRTTDPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 248
Score = 76.2 bits (160), Expect(3) = 2e-032
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = +3 / -1
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC +G++ +R GN AP PTMYDI SGLSPSM*STC A+ R G PH T
Sbjct: 793 GCW*IEGNDEPL*CMRSGNLAP*PTMYDIPSGLSPSM*STCLFASVRILVGVTTMFPHLT 614
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
L+ * R VT C L L SSPPG Y
Sbjct: 613 TCLETLKYFA*VKSRKVVDVTYCKLQSLIL*SSPPGVY 500
Score = 55.6 bits (115), Expect(3) = 2e-032
Identities = 29/57 (50%), Positives = 31/57 (54%)
Frame = +2 / -1
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
H YPE Q* G T+ WR L* P LSA SNT A RR LE* GS TM+
Sbjct: 250 HSNSSLYPEYEQ*NGQTSDWRESL*APLCLSAKSNTCIAVCRRCLE*MGSVVLNTMD 80
Score = 46.4 bits (95), Expect(3) = 2e-032
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / -1
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 481 VPGKREQTKLSAWPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSAP 326
>gb|DR072072.1|DR072072 RTDK1_23_H10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_23_H10_A029 5', mRNA sequence
Length = 689
Score = 149 bits (321), Expect(3) = 3e-077
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 393 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 572
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSV 512
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+
Sbjct: 573 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSI 683
Score = 95.0 bits (201), Expect(3) = 3e-077
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 159 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 338
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 339 RGHADNFVCSLLPGTPN 389
Score = 84.0 bits (177), Expect(3) = 3e-077
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = -2 / +3
Query: 1197 DPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 3 DPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 149
Score = 73.5 bits (154), Expect(3) = 1e-030
Identities = 42/84 (50%), Positives = 45/84 (53%)
Frame = +3 / -2
Query: 543 IRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASR 722
+R GN AP PTMYDI SGLSPSM*STC A+ R G PH T L+ *
Sbjct: 652 MRSGNLAP*PTMYDIPSGLSPSM*STCLFASVRILVGVTTMFPHLTTCLETLKYFA*VKS 473
Query: 723 RNDSCVTCCMLLLPTLNSSPPGEY 794
R VT C L L SSPPG Y
Sbjct: 472 RKVVDVTYCKLQSLIL*SSPPGVY 401
Score = 51.9 bits (107), Expect(3) = 1e-030
Identities = 27/50 (54%), Positives = 28/50 (56%)
Frame = +2 / -2
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGS 1198
H YPE Q* G T+ WR L* P LSA SNT A RR LE* GS
Sbjct: 151 HSNSSLYPEYEQ*NGQTSDWRESL*APLCLSAKSNTCIAVCRRCLE*MGS 2
Score = 46.4 bits (95), Expect(3) = 1e-030
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / -2
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 382 VPGKREQTKLSAWPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSAP 227
>gb|CF668810.1|CF668810 RTCNT1_38_G04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_38_G04_A029 5', mRNA sequence
Length = 699
Score = 191 bits (412), Expect(3) = 4e-076
Identities = 79/134 (58%), Positives = 96/134 (71%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 232 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 411
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 412 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 591
Query: 442 NLLVGAVVGGPTDD 401
N LVGAVVGGP ++
Sbjct: 592 NRLVGAVVGGPDNN 633
Score = 93.2 bits (197), Expect(3) = 4e-076
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = -1 / +1
Query: 1036 WLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFR 857
WL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +R
Sbjct: 1 WLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEYR 180
Query: 856 VNADNFMCTLLPGISN 809
+ADNF+C+LLPG N
Sbjct: 181 GHADNFVCSLLPGTPN 228
Score = 76.2 bits (160), Expect(4) = 8e-026
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = +3 / -2
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC +G++ +R GN AP PTMYDI SGLSPSM*STC A+ R G PH T
Sbjct: 533 GCW*IEGNDEPL*CMRSGNLAP*PTMYDIPSGLSPSM*STCLFASVRILVGVTTMFPHLT 354
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
L+ * R VT C L L SSPPG Y
Sbjct: 353 TCLETLKYFA*VKSRKVVDVTYCKLQSLIL*SSPPGVY 240
Score = 46.4 bits (95), Expect(4) = 8e-026
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / -2
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 221 VPGKREQTKLSAWPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSAP 66
Score = 40.5 bits (82), Expect(3) = 4e-076
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAP 332
V G D++D F D R + SEPTTYINAP
Sbjct: 610 VVGGPDNNDHFSDERNDYAHSEPTTYINAP 699
Score = 27.6 bits (54), Expect(4) = 8e-026
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 411 GPPTTAPTSRF 443
GPPTTAPTS F
Sbjct: 623 GPPTTAPTSLF 591
Score = 22.6 bits (43), Expect(4) = 8e-026
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3 / -2
Query: 333 GALMYVVGSDCWNTARASGKASESSVGPPT 422
GALM VVGS+ + R+S K S S P T
Sbjct: 698 GALM*VVGSE*A*SLRSSEKWSLLSGPPTT 609
>gb|CO172882.1|CO172882 NDL1_32_B09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_32_B09_A029 5', mRNA sequence
Length = 815
Score = 191 bits (412), Expect(3) = 5e-075
Identities = 79/134 (58%), Positives = 96/134 (71%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 181 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 360
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 361 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 540
Query: 442 NLLVGAVVGGPTDD 401
N LVGAVVGGP ++
Sbjct: 541 NRLVGAVVGGPDNN 582
Score = 78.0 bits (164), Expect(3) = 5e-075
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = -1 / +1
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGISN 809
LGA D +N F WD+KHAG VL++KEVL+ + + +R +ADNF+C+LLPG N
Sbjct: 13 LGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEYRGHADNFVCSLLPGTPN 177
Score = 76.2 bits (160), Expect(4) = 2e-028
Identities = 45/98 (45%), Positives = 51/98 (52%)
Frame = +3 / -1
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC +G++ +R GN AP PTMYDI SGLSPSM*STC A+ R G PH T
Sbjct: 482 GCW*IEGNDEPL*CMRSGNLAP*PTMYDIPSGLSPSM*STCLFASVRILVGVTTMFPHLT 303
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
L+ * R VT C L L SSPPG Y
Sbjct: 302 TCLETLKYFA*VKSRKVVDVTYCKLQSLIL*SSPPGVY 189
Score = 51.9 bits (107), Expect(3) = 5e-075
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 559 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 675
Score = 46.4 bits (95), Expect(4) = 2e-028
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / -1
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 170 VPGKREQTKLSAWPLYSSRDLEFLSRTSLAKRTLAPACLSSQLNILTLSSAP 15
Score = 31.3 bits (62), Expect(4) = 2e-028
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +3 / -1
Query: 309 K*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
K*AR P GALM VVGS+ + R+S K S S P T
Sbjct: 671 K*ARDPTKGALM*VVGSE*A*SLRSSEKWSLLSGPPTT 558
Score = 27.6 bits (54), Expect(4) = 2e-028
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 411 GPPTTAPTSRF 443
GPPTTAPTS F
Sbjct: 572 GPPTTAPTSLF 540
>gb|DR179224.1|DR179224 RTMNUT1_16_F11.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_F11_A029 5', mRNA sequence
Length = 846
Score = 219 bits (472), Expect(2) = 4e-068
Identities = 85/130 (65%), Positives = 105/130 (80%)
Frame = -1 / +1
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+ ++PGGL++K G SNMQHVT +SFLLLAY+NYL H+ V CGS + +P +LR VAK Q
Sbjct: 148 VAHTPGGLIYKPGGSNMQHVTAISFLLLAYANYLGHSSQVVHCGSIAVTPARLRAVAKSQ 327
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPN 440
VDYILGDNP+++SYMVGYG+ FP+ IHHR SSLPSV HP+ I CK G+ Y+ S +PNPN
Sbjct: 328 VDYILGDNPMKLSYMVGYGSGFPKYIHHRGSSLPSVTHHPSHITCKGGSQYFFSKSPNPN 507
Query: 439 LLVGAVVGGP 410
LLVGAVVGGP
Sbjct: 508 LLVGAVVGGP 537
Score = 60.6 bits (126), Expect(2) = 4e-068
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = -1 / +1
Query: 931 KHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
+HAGINVLISKE L+GK + Q+++ +ADNF+C+LLP
Sbjct: 19 QHAGINVLISKEFLLGKVGFLQTYKGHADNFICSLLP 129
Score = 56.5 bits (117), Expect(5) = 7e-027
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +3 / -2
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTG 653
G T+G++ WW+ G PYPTM + GLSP+M*ST LAT RS G
Sbjct: 446 GWCVTEGNDEPLWWMYLGKPEPYPTM*ESFIGLSPNM*STWLLATARSLAG 294
Score = 38.6 bits (78), Expect(5) = 7e-027
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / -2
Query: 699 R*LE*ASRRNDSCVTCCMLLLPTLNSSPPG 788
+* *A RND VTCC+LL P L PPG
Sbjct: 248 K*FA*AKSRNDMAVTCCILLPPGL*IKPPG 159
Score = 36.8 bits (74), Expect(5) = 7e-027
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = +3 / -2
Query: 297 GCAEK*ARRPMSGALMYVVGSDCWNTARAS 386
G K AR P +GALM VVGSDC RAS
Sbjct: 647 G*PRKNARAPTNGALM*VVGSDCLKYVRAS 558
Score = 32.7 bits (65), Expect(5) = 7e-027
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3 / -2
Query: 822 GRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPAC 929
G+ MKLSA + +FP + S ++RT +PAC
Sbjct: 128 GKSEQMKLSACPLYV*RKPTFPSKNSLDIRTFIPAC 21
Score = 28.6 bits (56), Expect(5) = 7e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 411 GPPTTAPTSRF 443
GPPTTAPT RF
Sbjct: 536 GPPTTAPTRRF 504
>gb|DR163085.1|DR163085 RTFE1_24_H02.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_24_H02_A029 5', mRNA sequence
Length = 744
Score = 93.6 bits (198), Expect(3) = 7e-062
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL+ KEVL+ + + +
Sbjct: 303 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLVKEVLLRNSKSLEEY 482
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 483 RGHADNFVCSLLPGTPN 533
Score = 92.7 bits (196), Expect(3) = 7e-062
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / +3
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 126 SMVFRTTDPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 293
Score = 91.3 bits (193), Expect(3) = 7e-062
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 537 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 716
Query: 622 QVDYILGDN 596
QVDYILGDN
Sbjct: 717 QVDYILGDN 743
Score = 55.6 bits (115), Expect(3) = 5e-023
Identities = 29/57 (50%), Positives = 31/57 (54%)
Frame = +2 / -3
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
H YPE Q* G T+ WR L* P LSA SNT A RR LE* GS TM+
Sbjct: 295 HSNSSLYPEYEQ*NGQTSDWRESL*APLCLSAKSNTCIAVCRRCLE*MGSVVLNTMD 125
Score = 46.4 bits (95), Expect(3) = 5e-023
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3 / -3
Query: 816 MPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAP 971
+PG+R KLSA + F RTS RTL PACL SQ N L S AP
Sbjct: 526 VPGKREQTKLSAWPLYSSRDLEFLSRTSLTKRTLAPACLSSQLNILTLSSAP 371
Score = 44.1 bits (90), Expect(3) = 5e-023
Identities = 29/66 (43%), Positives = 31/66 (46%)
Frame = +3 / -3
Query: 597 LSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNS 776
LSPSM*STC A+ R G PH T L+ * R VT C L L S
Sbjct: 742 LSPSM*STCLFASVRILVGVTTMFPHLTTCLETLKYFA*VKSRKVVDVTYCKLQSLIL*S 563
Query: 777 SPPGEY 794
SPPG Y
Sbjct: 562 SPPGVY 545
>gb|DR014982.1|DR014982 HEAT1_52_F11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_F11_A029 5', mRNA sequence
Length = 877
Score = 191 bits (412), Expect(3) = 1e-061
Identities = 79/134 (58%), Positives = 96/134 (71%)
Frame = -1 / -2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 801 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 622
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 621 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 442
Query: 442 NLLVGAVVGGPTDD 401
N LVGAVVGGP ++
Sbjct: 441 NRLVGAVVGGPDNN 400
Score = 51.9 bits (107), Expect(3) = 1e-061
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / -2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 423 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 307
Score = 33.1 bits (66), Expect(3) = 1e-061
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 868 QSFRVNADNFMCTLLPGISN 809
+ +R +ADNF+C+LLPG N
Sbjct: 864 EEYRGHADNFVCSLLPGTPN 805
>gb|DR013159.1|DR013159 HEAT1_17_H11.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_17_H11_A029 3', mRNA sequence
Length = 827
Score = 219 bits (472), Expect(2) = 2e-061
Identities = 85/130 (65%), Positives = 105/130 (80%)
Frame = -1 / -3
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+ ++PGGL++K G SNMQHVT +SFLLLAY+NYL H+ V CGS + +P +LR VAK Q
Sbjct: 702 VAHTPGGLIYKPGGSNMQHVTAISFLLLAYANYLGHSSQVVHCGSIAVTPARLRAVAKSQ 523
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPN 440
VDYILGDNP+++SYMVGYG+ FP+ IHHR SSLPSV HP+ I CK G+ Y+ S +PNPN
Sbjct: 522 VDYILGDNPMKLSYMVGYGSGFPKYIHHRGSSLPSVTHHPSHITCKGGSQYFFSKSPNPN 343
Query: 439 LLVGAVVGGP 410
LLVGAVVGGP
Sbjct: 342 LLVGAVVGGP 313
Score = 56.5 bits (117), Expect(4) = 3e-022
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +3 / +2
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTG 653
G T+G++ WW+ G PYPTM + GLSP+M*ST LAT RS G
Sbjct: 404 GWCVTEGNDEPLWWMYLGKPEPYPTM*ESFIGLSPNM*STWLLATARSLAG 556
Score = 38.6 bits (78), Expect(4) = 3e-022
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / +2
Query: 699 R*LE*ASRRNDSCVTCCMLLLPTLNSSPPG 788
+* *A RND VTCC+LL P L PPG
Sbjct: 602 K*FA*AKSRNDMAVTCCILLPPGL*IKPPG 691
Score = 38.2 bits (77), Expect(2) = 2e-061
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = -1 / -3
Query: 901 KEVLMGKDEYFQSFRVNADNFMCTLLP 821
+E L+GK + Q+++ +ADNF+C+LLP
Sbjct: 801 QEFLLGKVGFLQTYKGHADNFICSLLP 721
Score = 36.8 bits (74), Expect(4) = 3e-022
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = +3 / +2
Query: 297 GCAEK*ARRPMSGALMYVVGSDCWNTARAS 386
G K AR P +GALM VVGSDC RAS
Sbjct: 203 G*PRKNARAPTNGALM*VVGSDCLKYVRAS 292
Score = 28.6 bits (56), Expect(4) = 3e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 411 GPPTTAPTSRF 443
GPPTTAPT RF
Sbjct: 314 GPPTTAPTRRF 346
>gb|DR070111.1|DR070111 RTDK1_11_G12.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_G12_A029 3', mRNA sequence
Length = 841
Score = 95.0 bits (201), Expect(3) = 2e-058
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 426 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 247
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 246 RGHADNFVCSLLPGTPN 196
Score = 91.8 bits (194), Expect(3) = 2e-058
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = -2 / -2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 603 SMVFRTTDPIYSSHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 436
Score = 79.4 bits (167), Expect(3) = 2e-058
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -1 / -2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 192 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 13
Query: 622 QVDY 611
QVDY
Sbjct: 12 QVDY 1
>gb|DR179146.1|DR179146 RTMNUT1_16_F11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_F11_A029 3', mRNA sequence
Length = 884
Score = 219 bits (472), Expect(2) = 7e-058
Identities = 85/130 (65%), Positives = 105/130 (80%)
Frame = -1 / +2
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+ ++PGGL++K G SNMQHVT +SFLLLAY+NYL H+ V CGS + +P +LR VAK Q
Sbjct: 62 VAHTPGGLIYKPGGSNMQHVTAISFLLLAYANYLGHSSQVVHCGSIAVTPARLRAVAKSQ 241
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPN 440
VDYILGDNP+++SYMVGYG+ FP+ IHHR SSLPSV HP+ I CK G+ Y+ S +PNPN
Sbjct: 242 VDYILGDNPMKLSYMVGYGSGFPKYIHHRGSSLPSVTHHPSHITCKGGSQYFFSKSPNPN 421
Query: 439 LLVGAVVGGP 410
LLVGAVVGGP
Sbjct: 422 LLVGAVVGGP 451
Score = 56.5 bits (117), Expect(4) = 3e-022
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +3 / -3
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTG 653
G T+G++ WW+ G PYPTM + GLSP+M*ST LAT RS G
Sbjct: 360 GWCVTEGNDEPLWWMYLGKPEPYPTM*ESFIGLSPNM*STWLLATARSLAG 208
Score = 38.6 bits (78), Expect(4) = 3e-022
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / -3
Query: 699 R*LE*ASRRNDSCVTCCMLLLPTLNSSPPG 788
+* *A RND VTCC+LL P L PPG
Sbjct: 162 K*FA*AKSRNDMAVTCCILLPPGL*IKPPG 73
Score = 36.8 bits (74), Expect(4) = 3e-022
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = +3 / -3
Query: 297 GCAEK*ARRPMSGALMYVVGSDCWNTARAS 386
G K AR P +GALM VVGSDC RAS
Sbjct: 561 G*PRKNARAPTNGALM*VVGSDCLKYVRAS 472
Score = 28.6 bits (56), Expect(4) = 3e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 411 GPPTTAPTSRF 443
GPPTTAPT RF
Sbjct: 450 GPPTTAPTRRF 418
Score = 26.3 bits (51), Expect(2) = 7e-058
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 862 FRVNADNFMCTLLP 821
++ +ADNF+C+LLP
Sbjct: 2 YKGHADNFICSLLP 43
>gb|DR099637.1|DR099637 STRR1_57_B05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_57_B05_A033 3', mRNA sequence
Length = 567
Score = 191 bits (411), Expect(2) = 1e-057
Identities = 79/131 (60%), Positives = 94/131 (71%)
Frame = -1 / -2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 443 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 264
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 263 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 84
Query: 442 NLLVGAVVGGP 410
N LVGAVVGGP
Sbjct: 83 NRLVGAVVGGP 51
Score = 53.8 bits (111), Expect(2) = 1e-057
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = -1 / -2
Query: 928 HAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGISN 809
HAG VL++KEVL+ + + +R +ADNF+C+LLPG N
Sbjct: 566 HAGARVLLAKEVLLRNSKSLEEYRGHADNFVCSLLPGTPN 447
>gb|DR057721.1|DR057721 RTNIT1_7_A06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_7_A06_A029 5', mRNA sequence
Length = 903
Score = 191 bits (412), Expect(2) = 3e-057
Identities = 79/134 (58%), Positives = 96/134 (71%)
Frame = -1 / -3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 886 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 707
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 706 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 527
Query: 442 NLLVGAVVGGPTDD 401
N LVGAVVGGP ++
Sbjct: 526 NRLVGAVVGGPDNN 485
Score = 51.9 bits (107), Expect(2) = 3e-057
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / -3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 508 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 392
>gb|BF516953.1|BF516953 NXSI_007_C11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_007_C11 5' similar to Arabidopsis thaliana
sequence At4g02290 putative endo-1,4-beta glucanase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 566
Score = 185 bits (398), Expect(3) = 3e-056
Identities = 77/129 (59%), Positives = 92/129 (71%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 61 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 240
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNP
Sbjct: 241 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNP 420
Query: 442 NLLVGAVVG 416
N LVGAVVG
Sbjct: 421 NRLVGAVVG 447
Score = 40.9 bits (83), Expect(3) = 3e-056
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SE TYINAP G AY +
Sbjct: 439 VVGXXDNNDHFSDERNDYAHSEXXTYINAPXXGXXAYLA 555
Score = 32.2 bits (64), Expect(3) = 3e-056
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 862 FRVNADNFMCTLLPGISN 809
+R +ADNF+C+LLPG N
Sbjct: 4 YRGHADNFVCSLLPGTPN 57
>gb|BG040101.1|BG040101 NXSI_106_E02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_106_E02 5' similar to Arabidopsis thaliana
sequence At4g02290 putative endo-1,4-beta glucanase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 550
Score = 150 bits (322), Expect(2) = 3e-055
Identities = 60/106 (56%), Positives = 75/106 (70%)
Frame = -1 / +2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 224 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 403
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGC 485
QVDYILGDNPL MSYMVGY A+FP RIHHR SSLPS+ H C
Sbjct: 404 QVDYILGDNPLGMSYMVGYXAKFPERIHHRGSSLPSIXQHXQIXXC 541
Score = 86.3 bits (182), Expect(2) = 3e-055
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = -1 / +2
Query: 1027 KATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNA 848
+A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +R +A
Sbjct: 2 RASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEYRGHA 181
Query: 847 DNFMCTLLPGISN 809
DNF+C+LLPG N
Sbjct: 182 DNFVCSLLPGTPN 220
>gb|CO365142.1|CO365142 RTK1_23_H06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_H06_A029 5', mRNA sequence
Length = 855
Score = 183 bits (395), Expect(2) = 6e-055
Identities = 76/129 (58%), Positives = 92/129 (71%)
Frame = -1 / +3
Query: 787 PGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYI 608
PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYI
Sbjct: 3 PGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYI 182
Query: 607 LGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVG 428
LGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNPN LVG
Sbjct: 183 LGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVG 362
Query: 427 AVVGGPTDD 401
AVVGGP ++
Sbjct: 363 AVVGGPDNN 389
Score = 51.9 bits (107), Expect(2) = 6e-055
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 366 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 482
>gb|DR161544.1|DR161544 RTFE1_12_A09.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_12_A09_A029 5', mRNA sequence
Length = 729
Score = 183 bits (395), Expect(2) = 6e-055
Identities = 76/129 (58%), Positives = 92/129 (71%)
Frame = -1 / +1
Query: 787 PGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYI 608
PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYI
Sbjct: 1 PGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYI 180
Query: 607 LGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVG 428
LGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNPN LVG
Sbjct: 181 LGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVG 360
Query: 427 AVVGGPTDD 401
AVVGGP ++
Sbjct: 361 AVVGGPDNN 387
Score = 51.9 bits (107), Expect(2) = 6e-055
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 364 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 480
>gb|DR099221.1|DR099221 STRR1_54_B05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_B05_A033 3', mRNA sequence
Length = 670
Score = 176 bits (379), Expect(2) = 1e-054
Identities = 70/120 (58%), Positives = 89/120 (74%)
Frame = -1 / +1
Query: 769 KVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPL 590
++ SN+Q+VT +FLL Y+ YL+ A V+CG + +P ++R +AKRQVDYILGDNPL
Sbjct: 1 EMSDSNLQYVTTTTFLLFTYAKYLTAAHQVVTCGGVTVTPTRIRTLAKRQVDYILGDNPL 180
Query: 589 RMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
+SYMVGYGA+FP IHHR SSLPS+ HP +I C G + S APNPN+LVGAVVGGP
Sbjct: 181 GISYMVGYGAKFPEHIHHRGSSLPSIHMHPQKISCNDGFEAFHSNAPNPNILVGAVVGGP 360
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 49/116 (42%), Positives = 56/116 (48%)
Frame = +3 / -3
Query: 411 GPPTTAPTSRFXXXXXXXXXXXXXXQPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIR 590
GPPTTAPTS F I GC +G++ + GN AP PTMY+I
Sbjct: 359 GPPTTAPTSMFGLGALLWNASKPSLHEIFCGCM*MEGNDEPL*CMCSGNLAP*PTMYEIP 180
Query: 591 SGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLL 758
SGLSPSM*STC LA R G PH T A ++ * R VT C LL
Sbjct: 179 SGLSPSM*STCLLARVRIRVGVTVTPPHVTTWWAAVKYFA*VKSRKVVVVTYCKLL 12
Score = 57.9 bits (120), Expect(2) = 1e-054
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D+SD FPD R + SEPTTYINAPL+G LAY S
Sbjct: 346 VVGGPDNSDHFPDDRNDYAHSEPTTYINAPLVGSLAYMS 462
Score = 41.4 bits (84), Expect(2) = 6e-022
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +3 / -3
Query: 312 *ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
*AR P SGALM VVGS+C + R+SGK S S P T
Sbjct: 455 *AREPTSGALM*VVGSECA*SLRSSGKWSLLSGPPTT 345
>gb|CO365053.1|CO365053 RTK1_23_H06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_H06_A029 3', mRNA sequence
Length = 875
Score = 171 bits (368), Expect(2) = 3e-051
Identities = 71/124 (57%), Positives = 87/124 (70%)
Frame = -1 / +2
Query: 772 FKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNP 593
+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYILGDNP
Sbjct: 2 YKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNP 181
Query: 592 LRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGG 413
L MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNPN LVGAVVGG
Sbjct: 182 LGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGG 361
Query: 412 PTDD 401
P ++
Sbjct: 362 PDNN 373
Score = 51.9 bits (107), Expect(2) = 3e-051
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 350 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 466
>gb|DR167697.1|DR167697 RTPHOS1_20_B02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_20_B02_A029 5', mRNA sequence
Length = 835
Score = 168 bits (361), Expect(2) = 3e-050
Identities = 70/123 (56%), Positives = 86/123 (69%)
Frame = -1 / +2
Query: 769 KVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPL 590
++ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYILGDNPL
Sbjct: 20 QMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNPL 199
Query: 589 RMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNPN LVGAVVGGP
Sbjct: 200 GMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGP 379
Query: 409 TDD 401
++
Sbjct: 380 DNN 388
Score = 51.9 bits (107), Expect(2) = 3e-050
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 365 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 481
>gb|CO363908.1|CO363908 RTK1_12_B11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_B11_A029 5', mRNA sequence
Length = 780
Score = 167 bits (360), Expect(2) = 3e-050
Identities = 70/118 (59%), Positives = 84/118 (71%)
Frame = -1 / -1
Query: 754 NMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYM 575
N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYILGDNPL MSYM
Sbjct: 768 NLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYM 589
Query: 574 VGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
VGYGA+FP RIHHR SSLPS+ HP I C G S APNPN LVGAVVGGP ++
Sbjct: 588 VGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 415
Score = 51.9 bits (107), Expect(2) = 3e-050
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 438 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 322
>gb|DR101611.1|DR101611 STRR1_74_C04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_C04_A033 5', mRNA sequence
Length = 574
Score = 167 bits (360), Expect(2) = 3e-050
Identities = 70/118 (59%), Positives = 84/118 (71%)
Frame = -1 / +3
Query: 754 NMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYM 575
N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYILGDNPL MSYM
Sbjct: 15 NLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYM 194
Query: 574 VGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
VGYGA+FP RIHHR SSLPS+ HP I C G S APNPN LVGAVVGGP ++
Sbjct: 195 VGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 368
Score = 51.9 bits (107), Expect(2) = 3e-050
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 345 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 461
>gb|DR072510.1|DR072510 RTDK1_26_F03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_26_F03_A029 5', mRNA sequence
Length = 655
Score = 198 bits (427), Expect = 6e-050
Identities = 80/116 (68%), Positives = 91/116 (78%)
Frame = -1 / -1
Query: 757 SNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSY 578
SNMQHVT +SFLLLAY+NYL H+ V CGS +P +LR AKRQVDYILGDNPL++SY
Sbjct: 655 SNMQHVTAISFLLLAYANYLGHSSEVVQCGSIQVTPSRLRTAAKRQVDYILGDNPLKLSY 476
Query: 577 MVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
MVGYG RFP+ IHHR SSLPSV HP I CK G+ ++ S PNPNLLVGAVVGGP
Sbjct: 475 MVGYGPRFPQYIHHRGSSLPSVTEHPNHITCKGGSQFFFSKNPNPNLLVGAVVGGP 308
Score = 87.7 bits (185), Expect(3) = 3e-024
Identities = 44/85 (51%), Positives = 50/85 (58%)
Frame = +3 / +3
Query: 501 GCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHET 680
GC+ T+G++ I G R PYPTMY+ GLSPSM*ST RLA S G PH T
Sbjct: 399 GCSVTEGNDEPL**IYWGKRGPYPTMYESFRGLSPSM*STWRLAAVLSLEGVTWMLPH*T 578
Query: 681 RPPAWLR*LE*ASRRNDSCVTCCML 755
W +*L *A RND VTCCML
Sbjct: 579 TSEEWPK*LA*AKSRNDMAVTCCML 653
Score = 34.1 bits (68), Expect(3) = 3e-024
Identities = 20/38 (52%), Positives = 20/38 (52%)
Frame = +3 / +3
Query: 309 K*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
K A P SGALM VVGSDC SG S S P T
Sbjct: 210 KNASAPTSGALM*VVGSDCLKFGLLSGYWSWLSGPPTT 323
Score = 28.6 bits (56), Expect(3) = 3e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 411 GPPTTAPTSRF 443
GPPTTAPT RF
Sbjct: 309 GPPTTAPTRRF 341
>gb|CF479673.1|CF479673 RTWW3_11_E04.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_11_E04_A022 5', mRNA sequence
Length = 752
Score = 95.0 bits (201), Expect(3) = 2e-049
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 421 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEY 600
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 601 RGHADNFVCSLLPGTPN 651
Score = 92.7 bits (196), Expect(3) = 2e-049
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / +1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 244 SMVFRTTDPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 411
Score = 47.8 bits (98), Expect(3) = 2e-049
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYS 707
Q QY+PGGLL+K+ N+Q+VT +FLL Y+
Sbjct: 655 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYA 750
>gb|DR018974.1|DR018974 STRS1_27_C02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_C02_A034 3', mRNA sequence
Length = 794
Score = 164 bits (352), Expect(2) = 4e-049
Identities = 69/116 (59%), Positives = 82/116 (70%)
Frame = -1 / +3
Query: 748 QHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVG 569
Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYILGDNPL MSYMVG
Sbjct: 3 QYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYMVG 182
Query: 568 YGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
YGA+FP RIHHR SSLPS+ HP I C G S APNPN LVGAVVGGP ++
Sbjct: 183 YGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 350
Score = 51.9 bits (107), Expect(2) = 4e-049
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 327 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 443
>gb|DR018984.1|DR018984 STRS1_27_D02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_D02_A034 3', mRNA sequence
Length = 791
Score = 164 bits (352), Expect(2) = 4e-049
Identities = 69/116 (59%), Positives = 82/116 (70%)
Frame = -1 / +1
Query: 748 QHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVG 569
Q+VT +FLL Y+ YL + V CG+ +P ++R +AKRQVDYILGDNPL MSYMVG
Sbjct: 1 QYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYMVG 180
Query: 568 YGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
YGA+FP RIHHR SSLPS+ HP I C G S APNPN LVGAVVGGP ++
Sbjct: 181 YGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 348
Score = 51.9 bits (107), Expect(2) = 4e-049
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 325 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 441
>gb|DT636766.1|DT636766 EST1151697 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGV55 3' end, mRNA sequence
Length = 835
Score = 118 bits (253), Expect(5) = 3e-047
Identities = 48/105 (45%), Positives = 68/105 (64%)
Frame = -1 / +1
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+Q +PGGLLF +N+Q VT SFLL YS+YL+ + C + P +L +A+ Q
Sbjct: 520 VQKTPGGLLFWQKWNNIQFVTSASFLLTVYSDYLTATHKNIQCPGGAVQPSELVSLAQSQ 699
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGC 485
+DYILGDNP SYMVGYG+ +P+++HHRASS+ S + + C
Sbjct: 700 IDYILGDNPRATSYMVGYGSNYPQQVHHRASSIVSYKVSRSFVTC 834
Score = 59.7 bits (124), Expect(5) = 3e-047
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = -2 / +1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAA 1099
SIVFR +DPAYS LL+ A +F FADKYRG Y SS+ A
Sbjct: 97 SIVFRHSDPAYSNELLNHAEQLFTFADKYRGKYDSSITVA 216
Score = 35.4 bits (71), Expect(5) = 3e-047
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1 / +1
Query: 970 GASDAINEFGWDNKHAGINVLISKEVLMGK 881
G + EF WD K+AG+ VL SK ++ G+
Sbjct: 343 GTGWKMTEFSWDVKYAGVQVLASKFLMQGR 432
Score = 27.2 bits (53), Expect(5) = 3e-047
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGAS 962
AWLH+AT Y Y+ N LG +
Sbjct: 271 AWLHEATGDLSYMNYVIDNADSLGGT 348
Score = 22.6 bits (43), Expect(5) = 3e-047
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / +1
Query: 1086 YCDYSGYQDELL 1051
Y SGY+DELL
Sbjct: 226 YASKSGYEDELL 261
>gb|CO370530.1|CO370530 RTK1_68_B06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_B06_A029 5', mRNA sequence
Length = 708
Score = 156 bits (335), Expect(2) = 2e-046
Identities = 63/104 (60%), Positives = 77/104 (74%)
Frame = -1 / -2
Query: 712 YSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHR 533
Y+ YLS + V CG+ A+P ++R +AKRQVDYILGDNPL MSYMVGYG++FP RIHHR
Sbjct: 701 YAKYLSVSNQVVRCGNIIATPTRIRTLAKRQVDYILGDNPLGMSYMVGYGSKFPERIHHR 522
Query: 532 ASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
SSLPS+ HP +I C G S PNPN+LVGAVVGGP ++
Sbjct: 521 GSSLPSIYNHPQKISCNDGFQSLYSNGPNPNILVGAVVGGPDNN 390
Score = 51.0 bits (105), Expect(2) = 2e-046
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = -1 / -2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAP +G LAY +
Sbjct: 413 VVGGPDNNDRFSDERNDYAHSEPTTYINAPFVGCLAYLA 297
>gb|DR020253.1|DR020253 STRS1_35_D09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_35_D09_A034 5', mRNA sequence
Length = 734
Score = 154 bits (330), Expect(2) = 4e-046
Identities = 65/108 (60%), Positives = 76/108 (70%)
Frame = -1 / -1
Query: 724 LLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRR 545
LL Y+ YL + V CG+ +P ++R +AKRQVDYILGDNPL MSYMVGYGA+FP R
Sbjct: 734 LLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYMVGYGAKFPER 555
Query: 544 IHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
IHHR SSLPS+ HP I C G S APNPN LVGAVVGGP ++
Sbjct: 554 IHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 411
Score = 51.9 bits (107), Expect(2) = 4e-046
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 434 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 318
>gb|DR691236.1|DR691236 EST1081322 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAD586 3' end, mRNA sequence
Length = 785
Score = 113 bits (242), Expect(5) = 8e-046
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = -1 / +2
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+Q +PGGLLF +N+Q VT SFLL YS+YL+ + C + P +L +A+ Q
Sbjct: 512 VQKTPGGLLFWQKWNNIQFVTSASFLLTVYSDYLTATHKNIQCPGGAVQPSELVSLAQSQ 691
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRAS 527
+DYILGDNP SYMVGYG+ +P+++HHRAS
Sbjct: 692 IDYILGDNPRATSYMVGYGSNYPQQVHHRAS 784
Score = 59.7 bits (124), Expect(5) = 8e-046
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAA 1099
SIVFR +DPAYS LL+ A +F FADKYRG Y SS+ A
Sbjct: 89 SIVFRHSDPAYSNELLNHAEQLFTFADKYRGKYDSSITVA 208
Score = 35.4 bits (71), Expect(5) = 8e-046
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1 / +2
Query: 970 GASDAINEFGWDNKHAGINVLISKEVLMGK 881
G + EF WD K+AG+ VL SK ++ G+
Sbjct: 335 GTGWKMTEFSWDVKYAGVQVLASKFLMQGR 424
Score = 27.2 bits (53), Expect(5) = 8e-046
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1 / +2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGAS 962
AWLH+AT Y Y+ N LG +
Sbjct: 263 AWLHEATGDLSYMNYVIDNADSLGGT 340
Score = 22.6 bits (43), Expect(5) = 8e-046
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / +2
Query: 1086 YCDYSGYQDELL 1051
Y SGY+DELL
Sbjct: 218 YASKSGYEDELL 253
>gb|DR167624.1|DR167624 RTPHOS1_20_B02.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_20_B02_A029 3', mRNA sequence
Length = 752
Score = 147 bits (315), Expect(2) = 5e-044
Identities = 62/103 (60%), Positives = 73/103 (70%)
Frame = -1 / +2
Query: 709 SNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRA 530
+ YL + V CG+ +P ++R +AKRQVDYILGDNPL MSYMVGYGA+FP RIHHR
Sbjct: 2 AKYLRVSKQVVRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYMVGYGAKFPERIHHRG 181
Query: 529 SSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
SSLPS+ HP I C G S APNPN LVGAVVGGP ++
Sbjct: 182 SSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 310
Score = 51.9 bits (107), Expect(2) = 5e-044
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 287 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 403
>gb|DR161469.1|DR161469 RTFE1_12_A09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_12_A09_A029 3', mRNA sequence
Length = 804
Score = 146 bits (313), Expect(2) = 9e-044
Identities = 60/93 (64%), Positives = 69/93 (74%)
Frame = -1 / +2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V CG+ +P ++R +AKRQVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP
Sbjct: 14 VRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHP 193
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
I C G S APNPN LVGAVVGGP ++
Sbjct: 194 QIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 292
Score = 51.9 bits (107), Expect(2) = 9e-044
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 269 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 385
>gb|CF663920.1|CF663920 RTCNT1_6_B08.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_6_B08_A029 3', mRNA sequence
Length = 774
Score = 146 bits (313), Expect(2) = 9e-044
Identities = 60/93 (64%), Positives = 69/93 (74%)
Frame = -1 / +3
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V CG+ +P ++R +AKRQVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP
Sbjct: 24 VRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHP 203
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
I C G S APNPN LVGAVVGGP ++
Sbjct: 204 QIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 302
Score = 51.9 bits (107), Expect(2) = 9e-044
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 279 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 395
>gb|DR070193.1|DR070193 RTDK1_11_G12.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_G12_A029 5', mRNA sequence
Length = 749
Score = 146 bits (313), Expect(2) = 9e-044
Identities = 60/93 (64%), Positives = 69/93 (74%)
Frame = -1 / -1
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V CG+ +P ++R +AKRQVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP
Sbjct: 719 VRCGNMVVTPTRIRTLAKRQVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHP 540
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDD 401
I C G S APNPN LVGAVVGGP ++
Sbjct: 539 QIIPCNDGFQSLYSNAPNPNRLVGAVVGGPDNN 441
Score = 51.9 bits (107), Expect(2) = 9e-044
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 464 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 348
>gb|DR695212.1|DR695212 EST1085305 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEM01 3' end, mRNA sequence
Length = 636
Score = 175 bits (376), Expect = 7e-043
Identities = 77/166 (46%), Positives = 104/166 (62%)
Frame = -1 / +2
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
N +Q +PGGLL+ +NM VT SFLL AYS+YLS AG ++ C +P +L
Sbjct: 20 NGDNVQRTPGGLLYWQKWNNMHVVTSASFLLTAYSDYLSSAGKQLQCPGGQVNPSELLAF 199
Query: 631 AKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPA 452
AK QVDYILGDNP SYMVGYG +PR++HHRASS+ S + CK G + +
Sbjct: 200 AKSQVDYILGDNPRATSYMVGYGPNYPRQVHHRASSIVSYKEDSTFVSCKGGYSIWFDRE 379
Query: 451 PNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
+ ++ V G D++D F D+R +QQ+EPTTY N+PL+G+LA
Sbjct: 380 RSDPNVLVGAVVGGPDNNDNFADSRDNYQQTEPTTYNNSPLVGVLA 517
>gb|CF476183.1|CF476183 RTWW2_21_G10.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_21_G10_A021 5', mRNA sequence
Length = 712
Score = 113 bits (242), Expect(3) = 7e-043
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = -1 / +2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWLHKAT+ Y YI+ N LGA + INEFGWDNKHAGINVL+SKE L+GK Q++
Sbjct: 443 AWLHKATKNHSYINYIQINGKTLGADENINEFGWDNKHAGINVLVSKEFLLGKVASLQTY 622
Query: 859 RVNADNFMCTLLPGISN 809
R AD+F+C+L+P S+
Sbjct: 623 RGYADDFICSLIPETSD 673
Score = 55.6 bits (115), Expect(3) = 7e-043
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSS 1111
SIVF+ +DP YS+ LL A+ VF FADKYRG YS S
Sbjct: 260 SIVFQSSDPGYSQLLLRTAIRVFGFADKYRGAYSDS 367
Score = 44.1 bits (90), Expect(3) = 7e-043
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 1119 SSSLHAAVCPCYCDYSGYQDELL 1051
S ++ A VCP YCD+ GYQDELL
Sbjct: 365 SQTVRAGVCPFYCDFDGYQDELL 433
>gb|CX715048.1|CX715048 RTPQ1_30_B02.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_30_B02_A032 5', mRNA sequence
Length = 421
Score = 115 bits (246), Expect(2) = 2e-042
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 180 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 359
Query: 622 QVDYILGDNPLRMSYMVGYG 563
QVDYILGDNPL MSYMVGYG
Sbjct: 360 QVDYILGDNPLGMSYMVGYG 419
Score = 78.0 bits (164), Expect(2) = 2e-042
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = -1 / +3
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGISN 809
LGA D +N F WD+KHAG VL++KEVL+ + + +R +ADNF+C+LLPG N
Sbjct: 12 LGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKSLEEYRGHADNFVCSLLPGTPN 176
>gb|CO176214.1|CO176214 NDL1_60_C02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_60_C02_A029 5', mRNA sequence
Length = 415
Score = 160 bits (344), Expect(2) = 2e-042
Identities = 64/109 (58%), Positives = 79/109 (72%)
Frame = -1 / +2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGLL+K+ N+Q+VT +FLL Y+ YL + V CG+ +P ++R +AKR
Sbjct: 86 QAQYTPGGLLYKMSDCNLQYVTSTTFLLFTYAKYLRVSKQVVRCGNMVVTPTRIRTLAKR 265
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
QVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G
Sbjct: 266 QVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDG 412
Score = 33.1 bits (66), Expect(2) = 2e-042
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 868 QSFRVNADNFMCTLLPGISN 809
+ +R +ADNF+C+LLPG N
Sbjct: 23 EEYRGHADNFVCSLLPGTPN 82
>gb|CO198819.1|CO198819 GEO1_16_G05.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_16_G05_A029 5', mRNA sequence
Length = 722
Score = 138 bits (297), Expect(2) = 1e-041
Identities = 57/85 (67%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 655 SPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
+P ++R +AKRQVDYILGDNPL MSYMVGYGA+FP RIHHR SSLPS+ HP I C G
Sbjct: 11 TPTRIRTLAKRQVDYILGDNPLGMSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDG 190
Query: 475 AAYYTSPAPNPNLLVGAVVGGPTDD 401
S APNPN LVGAVVGGP ++
Sbjct: 191 FQSLYSNAPNPNRLVGAVVGGPDNN 265
Score = 51.9 bits (107), Expect(2) = 1e-041
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 242 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 358
>gb|BQ702998.1|BQ702998 NXSI_135_B07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_135_B07 5' similar to Arabidopsis thaliana
sequence At1g02800 endo-1,4-beta-glucanase precursor,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 535
Score = 95.0 bits (201), Expect(2) = 1e-040
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = -1 / +2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWL +A+R Y YI+ + LGA D +N F WD+KHAG VL++KEVL+ + + +
Sbjct: 275 AWLQRASRNVSYISYIQSHGQNLGAEDNVNIFSWDDKHAGARVLLAKEVLLRNSKXXEEY 454
Query: 859 RVNADNFMCTLLPGISN 809
R +ADNF+C+LLPG N
Sbjct: 455 RGHADNFVCSLLPGTPN 505
Score = 92.7 bits (196), Expect(2) = 1e-040
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR DP YS+ LL A+ VF+FADK+RG YS SL + VCP YC YSGY DELL
Sbjct: 98 SMVFRTTDPIYSRHLLQTAMQVFDFADKHRGAYSDSLQSEVCPFYCSYSGYNDELL 265
>gb|CO368326.1|CO368326 RTK1_40_A07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_A07_A029 3', mRNA sequence
Length = 711
Score = 135 bits (290), Expect(2) = 6e-040
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = -1 / +3
Query: 655 SPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
+P ++R +AKRQVDYILGDNPL MSYMVGYGA+FP RIHHR SLPS+ HP I C G
Sbjct: 3 TPTRIRTLAKRQVDYILGDNPLGMSYMVGYGAKFPERIHHRGWSLPSIYQHPQIIPCNDG 182
Query: 475 AAYYTSPAPNPNLLVGAVVGGPTDD 401
S APNPN LVGAVVGGP ++
Sbjct: 183 FQSLYSNAPNPNRLVGAVVGGPDNN 257
Score = 49.6 bits (102), Expect(2) = 6e-040
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + EPTTYINAPL+G LAY++
Sbjct: 234 VVGGPDNNDHFSDERNDYAHFEPTTYINAPLVGSLAYWA 350
>gb|CF672997.1|CF672997 RTCNT1_75_H01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_H01_A029 3', mRNA sequence
Length = 737
Score = 99.1 bits (210), Expect(3) = 2e-039
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = -1 / +3
Query: 586 MSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPT 407
MSYMVGYGA+FP RIHHR SSLPS+ HP I C G S APNPN LVGAVVGGP
Sbjct: 108 MSYMVGYGAKFPERIHHRGSSLPSIYQHPQIIPCNDGFQSLYSNAPNPNRLVGAVVGGPD 287
Query: 406 DD 401
++
Sbjct: 288 NN 293
Score = 51.9 bits (107), Expect(3) = 2e-039
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D++D F D R + SEPTTYINAPL+G LAY +
Sbjct: 270 VVGGPDNNDHFSDERNDYAHSEPTTYINAPLVGSLAYLA 386
Score = 50.6 bits (104), Expect(3) = 2e-039
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -1 / +2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPL 590
V CG+ +P ++R +AKRQVDYILGDNPL
Sbjct: 14 VRCGNMVVTPXRIRTLAKRQVDYILGDNPL 103
>gb|AW056501.1|AW056501 ST52F03 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST52F03, mRNA sequence
Length = 475
Score = 99.6 bits (211), Expect(2) = 1e-037
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWLHKATR Y YI+ LGA ++ N FGWDNKHAG VL+SKE L+ + +
Sbjct: 31 AWLHKATRNPTYLNYIQSKGQSLGADESDNIFGWDNKHAGARVLLSKEFLLRNVKSLHDY 210
Query: 859 RVNADNFMCTLLPGIS 812
+ +ADN++C+LLPG+S
Sbjct: 211 KGHADNYICSLLPGVS 258
Score = 78.5 bits (165), Expect(2) = 1e-037
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = -1 / +1
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
++ Q +Y+PGGLL+ + SN+Q+VT SFLL Y+ YLS + + GS + P R +
Sbjct: 256 SYSQAKYTPGGLLYTLSDSNLQYVTSSSFLLFTYAKYLSSSKHXXTXGSMTXXPKXXRTI 435
Query: 631 AKRQVDYILGD 599
AKR DYI GD
Sbjct: 436 AKRXXDYIXGD 468
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 454,976,230
Number of Sequences: 355925
Number of extensions: 6276556
Number of successful extensions: 40942
Number of sequences better than 1.0e-020: 113
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 18907287160
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)