TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521865.2.1
(638 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO162271.1|CO162271 FLD1_34_F09.b1_A029 Root flooded Pin... 259 1e-068
gb|CO162352.1|CO162352 FLD1_34_F09.g1_A029 Root flooded Pin... 259 1e-068
gb|DR011092.1|DR011092 HEAT1_3_H07.b1_A029 Root at 37 C for... 259 1e-068
gb|DR023804.1|DR023804 STRS1_60_E01.b1_A034 Shoot tip pitch... 259 1e-068
gb|DR388885.1|DR388885 RTHG1_31_C03.b1_A029 Roots plus adde... 259 1e-068
gb|CF478957.1|CF478957 RTWW3_21_C10.b1_A022 Well-watered lo... 257 5e-068
gb|DR101537.1|DR101537 STRR1_74_B05.b1_A033 Stem Response R... 255 2e-067
gb|DR160314.1|DR160314 RTFE1_5_F12.b1_A029 Roots minus iron... 255 2e-067
gb|CF478251.1|CF478251 RTWW3_18_C07.b1_A022 Well-watered lo... 244 5e-064
gb|DR059112.1|DR059112 RTNIT1_15_F05.g1_A029 Roots minus ni... 237 6e-062
gb|DR110850.1|DR110850 RTS1_13_A01.g1_A029 Roots minus sulf... 237 6e-062
gb|DR741980.1|DR741980 RTCU1_1_A06.b1_A029 Roots plus added... 237 6e-062
gb|CF664834.1|CF664834 RTCNT1_12_F03.b1_A029 Root control P... 204 3e-052
gb|CF664918.1|CF664918 RTCNT1_12_F03.g1_A029 Root control P... 155 6e-047
gb|DR101601.1|DR101601 STRR1_74_B05.g1_A033 Stem Response R... 187 6e-047
gb|DR023886.1|DR023886 STRS1_60_E01.g1_A034 Shoot tip pitch... 126 1e-028
gb|CF665611.1|CF665611 RTCNT1_17_D03.b1_A029 Root control P... 107 8e-023
>gb|CO162271.1|CO162271 FLD1_34_F09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_F09_A029 3', mRNA sequence
Length = 705
Score = 259 bits (560), Expect = 1e-068
Identities = 102/118 (86%), Positives = 112/118 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
L+ GAH++GNV+V E+A+IGEGCLIGPDVAIGPGCV+E GVRLSRCTVMRGVRIKKHAC+
Sbjct: 86 LSFGAHIIGNVIVDETAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTVMRGVRIKKHACV 265
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWH TVGQWAR+ENMT+LGEDVHVCDEVYSNGGVVLPHKEIKSSI KPEIVM*
Sbjct: 266 SGSIIGWHCTVGQWARVENMTVLGEDVHVCDEVYSNGGVVLPHKEIKSSITKPEIVM* 439
Score = 151 bits (324), Expect = 5e-036
Identities = 69/116 (59%), Positives = 79/116 (68%)
Frame = -3 / -1
Query: 357 AHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEM 178
+HMTISG MLDLISL G PR V+FS AH PTV+CQP+ML E
Sbjct: 441 SHMTISGLVMLDLISLWGSTTPPLLYTSSQTCTSSPRTVMFSTLAHCPTVQCQPMMLPET 262
Query: 177 QACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAP 10
QACFLI TP MTVQR++LTP+S THPGP+ATSGPI+ PSPI A+S T T P AP
Sbjct: 261 QACFLILTPLMTVQRDNLTPASITHPGPIATSGPIKHPSPI*AVSSTITFPIM*AP 94
Score = 107 bits (228), Expect = 8e-023
Identities = 46/113 (40%), Positives = 76/113 (67%)
Frame = -2 / -3
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L +A D M +++T IA++LIT+M+ILP + H+ + PL NS +P ++A +
Sbjct: 439 SHDNFWLGDAGFDFLMGKHHTPIAIYLITNMHILP*NGHVFHSGPLPNSTMPTNDAPRNT 260
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
SML + ++ HD AA +PH L++ PR++ +I N F NL +L++ HI+NN+
Sbjct: 259 SMLFNPNSPHDRAARQPHPCLNHAPRTDCNIWPN*APFPNLSSLIYYHISNNV 101
>gb|CO162352.1|CO162352 FLD1_34_F09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_F09_A029 5', mRNA sequence
Length = 826
Score = 259 bits (560), Expect = 1e-068
Identities = 102/118 (86%), Positives = 112/118 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
L+ GAH++GNV+V E+A+IGEGCLIGPDVAIGPGCV+E GVRLSRCTVMRGVRIKKHAC+
Sbjct: 299 LSFGAHIIGNVIVDETAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTVMRGVRIKKHACV 478
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWH TVGQWAR+ENMT+LGEDVHVCDEVYSNGGVVLPHKEIKSSI KPEIVM*
Sbjct: 479 SGSIIGWHCTVGQWARVENMTVLGEDVHVCDEVYSNGGVVLPHKEIKSSITKPEIVM* 652
Score = 151 bits (324), Expect = 5e-036
Identities = 69/116 (59%), Positives = 79/116 (68%)
Frame = -3 / -2
Query: 357 AHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEM 178
+HMTISG MLDLISL G PR V+FS AH PTV+CQP+ML E
Sbjct: 654 SHMTISGLVMLDLISLWGSTTPPLLYTSSQTCTSSPRTVMFSTLAHCPTVQCQPMMLPET 475
Query: 177 QACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAP 10
QACFLI TP MTVQR++LTP+S THPGP+ATSGPI+ PSPI A+S T T P AP
Sbjct: 474 QACFLILTPLMTVQRDNLTPASITHPGPIATSGPIKHPSPI*AVSSTITFPIM*AP 307
Score = 107 bits (228), Expect = 8e-023
Identities = 46/113 (40%), Positives = 76/113 (67%)
Frame = -2 / -1
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L +A D M +++T IA++LIT+M+ILP + H+ + PL NS +P ++A +
Sbjct: 652 SHDNFWLGDAGFDFLMGKHHTPIAIYLITNMHILP*NGHVFHSGPLPNSTMPTNDAPRNT 473
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
SML + ++ HD AA +PH L++ PR++ +I N F NL +L++ HI+NN+
Sbjct: 472 SMLFNPNSPHDRAARQPHPCLNHAPRTDCNIWPN*APFPNLSSLIYYHISNNV 314
>gb|DR011092.1|DR011092 HEAT1_3_H07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_H07_A029 3', mRNA sequence
Length = 730
Score = 259 bits (560), Expect = 1e-068
Identities = 102/118 (86%), Positives = 112/118 (94%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
L+ GAH++GNV+V E+A+IGEGCLIGPDVAIGPGCV+E GVRLSRCTVMRGVRIKKHAC+
Sbjct: 106 LSFGAHIIGNVIVDETAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTVMRGVRIKKHACV 285
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWH TVGQWAR+ENMT+LGEDVHVCDEVYSNGGVVLPHKEIKSSI KPEIVM*
Sbjct: 286 SGSIIGWHCTVGQWARVENMTVLGEDVHVCDEVYSNGGVVLPHKEIKSSITKPEIVM* 459
Score = 151 bits (324), Expect = 5e-036
Identities = 69/116 (59%), Positives = 79/116 (68%)
Frame = -3 / -3
Query: 357 AHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEM 178
+HMTISG MLDLISL G PR V+FS AH PTV+CQP+ML E
Sbjct: 461 SHMTISGLVMLDLISLWGSTTPPLLYTSSQTCTSSPRTVMFSTLAHCPTVQCQPMMLPET 282
Query: 177 QACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAP 10
QACFLI TP MTVQR++LTP+S THPGP+ATSGPI+ PSPI A+S T T P AP
Sbjct: 281 QACFLILTPLMTVQRDNLTPASITHPGPIATSGPIKHPSPI*AVSSTITFPIM*AP 114
Score = 107 bits (228), Expect = 8e-023
Identities = 46/113 (40%), Positives = 76/113 (67%)
Frame = -2 / -2
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L +A D M +++T IA++LIT+M+ILP + H+ + PL NS +P ++A +
Sbjct: 459 SHDNFWLGDAGFDFLMGKHHTPIAIYLITNMHILP*NGHVFHSGPLPNSTMPTNDAPRNT 280
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
SML + ++ HD AA +PH L++ PR++ +I N F NL +L++ HI+NN+
Sbjct: 279 SMLFNPNSPHDRAARQPHPCLNHAPRTDCNIWPN*APFPNLSSLIYYHISNNV 121
>gb|DR023804.1|DR023804 STRS1_60_E01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_60_E01_A034 3', mRNA sequence
Length = 830
Score = 259 bits (560), Expect = 1e-068
Identities = 102/118 (86%), Positives = 112/118 (94%)
Frame = +2 / +3
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
L+ GAH++GNV+V E+A+IGEGCLIGPDVAIGPGCV+E GVRLSRCTVMRGVRIKKHAC+
Sbjct: 234 LSFGAHIIGNVIVDETAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTVMRGVRIKKHACV 413
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWH TVGQWAR+ENMT+LGEDVHVCDEVYSNGGVVLPHKEIKSSI KPEIVM*
Sbjct: 414 SGSIIGWHCTVGQWARVENMTVLGEDVHVCDEVYSNGGVVLPHKEIKSSITKPEIVM* 587
Score = 151 bits (324), Expect = 5e-036
Identities = 69/116 (59%), Positives = 79/116 (68%)
Frame = -3 / -2
Query: 357 AHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEM 178
+HMTISG MLDLISL G PR V+FS AH PTV+CQP+ML E
Sbjct: 589 SHMTISGLVMLDLISLWGSTTPPLLYTSSQTCTSSPRTVMFSTLAHCPTVQCQPMMLPET 410
Query: 177 QACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAP 10
QACFLI TP MTVQR++LTP+S THPGP+ATSGPI+ PSPI A+S T T P AP
Sbjct: 409 QACFLILTPLMTVQRDNLTPASITHPGPIATSGPIKHPSPI*AVSSTITFPIM*AP 242
Score = 107 bits (228), Expect = 8e-023
Identities = 46/113 (40%), Positives = 76/113 (67%)
Frame = -2 / -1
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L +A D M +++T IA++LIT+M+ILP + H+ + PL NS +P ++A +
Sbjct: 587 SHDNFWLGDAGFDFLMGKHHTPIAIYLITNMHILP*NGHVFHSGPLPNSTMPTNDAPRNT 408
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
SML + ++ HD AA +PH L++ PR++ +I N F NL +L++ HI+NN+
Sbjct: 407 SMLFNPNSPHDRAARQPHPCLNHAPRTDCNIWPN*APFPNLSSLIYYHISNNV 249
>gb|DR388885.1|DR388885 RTHG1_31_C03.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_31_C03_A029 3', mRNA sequence
Length = 793
Score = 259 bits (560), Expect = 1e-068
Identities = 102/118 (86%), Positives = 112/118 (94%)
Frame = +2 / -3
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
L+ GAH++GNV+V E+A+IGEGCLIGPDVAIGPGCV+E GVRLSRCTVMRGVRIKKHAC+
Sbjct: 437 LSFGAHIIGNVIVDETAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTVMRGVRIKKHACV 258
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWH TVGQWAR+ENMT+LGEDVHVCDEVYSNGGVVLPHKEIKSSI KPEIVM*
Sbjct: 257 SGSIIGWHCTVGQWARVENMTVLGEDVHVCDEVYSNGGVVLPHKEIKSSITKPEIVM* 84
Score = 151 bits (324), Expect = 5e-036
Identities = 69/116 (59%), Positives = 79/116 (68%)
Frame = -3 / +1
Query: 357 AHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEM 178
+HMTISG MLDLISL G PR V+FS AH PTV+CQP+ML E
Sbjct: 82 SHMTISGLVMLDLISLWGSTTPPLLYTSSQTCTSSPRTVMFSTLAHCPTVQCQPMMLPET 261
Query: 177 QACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAP 10
QACFLI TP MTVQR++LTP+S THPGP+ATSGPI+ PSPI A+S T T P AP
Sbjct: 262 QACFLILTPLMTVQRDNLTPASITHPGPIATSGPIKHPSPI*AVSSTITFPIM*AP 429
Score = 107 bits (228), Expect = 8e-023
Identities = 46/113 (40%), Positives = 76/113 (67%)
Frame = -2 / +3
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L +A D M +++T IA++LIT+M+ILP + H+ + PL NS +P ++A +
Sbjct: 84 SHDNFWLGDAGFDFLMGKHHTPIAIYLITNMHILP*NGHVFHSGPLPNSTMPTNDAPRNT 263
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
SML + ++ HD AA +PH L++ PR++ +I N F NL +L++ HI+NN+
Sbjct: 264 SMLFNPNSPHDRAARQPHPCLNHAPRTDCNIWPN*APFPNLSSLIYYHISNNV 422
>gb|CF478957.1|CF478957 RTWW3_21_C10.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_21_C10_A022 3', mRNA sequence
Length = 733
Score = 257 bits (556), Expect = 5e-068
Identities = 102/118 (86%), Positives = 111/118 (94%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
L+ GAH+ GNV+V E+A+IGEGCLIGPDVAIGPGCV+E GVRLSRCTVMRGVRIKKHAC+
Sbjct: 79 LSFGAHIXGNVIVDETAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTVMRGVRIKKHACV 258
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWH TVGQWAR+ENMT+LGEDVHVCDEVYSNGGVVLPHKEIKSSI KPEIVM*
Sbjct: 259 SGSIIGWHCTVGQWARVENMTVLGEDVHVCDEVYSNGGVVLPHKEIKSSITKPEIVM* 432
Score = 151 bits (324), Expect = 5e-036
Identities = 69/116 (59%), Positives = 79/116 (68%)
Frame = -3 / -3
Query: 357 AHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEM 178
+HMTISG MLDLISL G PR V+FS AH PTV+CQP+ML E
Sbjct: 434 SHMTISGLVMLDLISLWGSTTPPLLYTSSQTCTSSPRTVMFSTLAHCPTVQCQPMMLPET 255
Query: 177 QACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAP 10
QACFLI TP MTVQR++LTP+S THPGP+ATSGPI+ PSPI A+S T T P AP
Sbjct: 254 QACFLILTPLMTVQRDNLTPASITHPGPIATSGPIKHPSPI*AVSSTITFPIM*AP 87
Score = 104 bits (221), Expect = 8e-022
Identities = 45/113 (39%), Positives = 75/113 (66%)
Frame = -2 / -2
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L +A D M +++T IA++LIT+M+ILP + H+ + PL NS +P ++A +
Sbjct: 432 SHDNFWLGDAGFDFLMGKHHTPIAIYLITNMHILP*NGHVFHSGPLPNSTMPTNDAPRNT 253
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
SML + ++ HD AA +PH L++ PR++ +I N F NL +L++ HI+ N+
Sbjct: 252 SMLFNPNSPHDRAARQPHPCLNHAPRTDCNIWPN*APFPNLSSLIYYHISXNV 94
>gb|DR101537.1|DR101537 STRR1_74_B05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_B05_A033 3', mRNA sequence
Length = 858
Score = 255 bits (551), Expect = 2e-067
Identities = 102/118 (86%), Positives = 111/118 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LATG ++VGNV+V +A+IGEGCLIGPDVAIGPGC +E GVRLSRCT+MRGVRIKKHAC+
Sbjct: 143 LATGVNIVGNVIVDSTAQIGEGCLIGPDVAIGPGCAIEAGVRLSRCTIMRGVRIKKHACV 322
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWHSTVGQWAR+ENMTILGEDVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*
Sbjct: 323 SGSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKSSILKPEIVM* 496
Score = 160 bits (343), Expect = 1e-038
Identities = 71/118 (60%), Positives = 82/118 (69%)
Frame = -3 / -1
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISG R+LDLISL GR P IV+FS RAH PTVECQP++L + Q
Sbjct: 495 HMTISGLRILDLISL*GRTTPPLLYTSSETWTSSPNIVMFSTRAHWPTVECQPMILPDTQ 316
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAPVAS 1
ACFL+RTPR+ V R+SLTP+S PGPMATSGPIRQPSPI A+ T T PT PVA+
Sbjct: 315 ACFLMRTPRIMVHRDSLTPASIAQPGPMATSGPIRQPSPICAVLSTITFPTMLTPVAN 142
Score = 106 bits (227), Expect = 1e-022
Identities = 46/113 (40%), Positives = 72/113 (63%)
Frame = -2 / -3
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L+N D FM +++T+IAV+LI +M+ILPQ H+ PL NS +P ++
Sbjct: 496 SHDNFWLENTGFDFFMRKDHTSIAVYLIRNMDILPQYCHVFNASPLANSRMPTNDTSRHT 317
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
S+ LD H+ H+ A + H+ L+ T +NG I NQ T +NL + ++ HI+NN+
Sbjct: 316 SVFLDAHSTHNGAP*QSHSCLNRTTWANGHIWPNQATLTNLCSAVNYHISNNV 158
>gb|DR160314.1|DR160314 RTFE1_5_F12.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_5_F12_A029 3', mRNA sequence
Length = 734
Score = 255 bits (551), Expect = 2e-067
Identities = 102/118 (86%), Positives = 111/118 (94%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LATG ++VGNV+V +A+IGEGCLIGPDVAIGPGC +E GVRLSRCT+MRGVRIKKHAC+
Sbjct: 7 LATGVNIVGNVIVDSTAQIGEGCLIGPDVAIGPGCAIEAGVRLSRCTIMRGVRIKKHACV 186
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SIIGWHSTVGQWAR+ENMTILGEDVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*
Sbjct: 187 SGSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKSSILKPEIVM* 360
Score = 160 bits (343), Expect = 1e-038
Identities = 71/118 (60%), Positives = 82/118 (69%)
Frame = -3 / -1
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISG R+LDLISL GR P IV+FS RAH PTVECQP++L + Q
Sbjct: 359 HMTISGLRILDLISL*GRTTPPLLYTSSETWTSSPNIVMFSTRAHWPTVECQPMILPDTQ 180
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAPVAS 1
ACFL+RTPR+ V R+SLTP+S PGPMATSGPIRQPSPI A+ T T PT PVA+
Sbjct: 179 ACFLMRTPRIMVHRDSLTPASIAQPGPMATSGPIRQPSPICAVLSTITFPTMLTPVAN 6
Score = 106 bits (227), Expect = 1e-022
Identities = 46/113 (40%), Positives = 72/113 (63%)
Frame = -2 / -3
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L+N D FM +++T+IAV+LI +M+ILPQ H+ PL NS +P ++
Sbjct: 360 SHDNFWLENTGFDFFMRKDHTSIAVYLIRNMDILPQYCHVFNASPLANSRMPTNDTSRHT 181
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
S+ LD H+ H+ A + H+ L+ T +NG I NQ T +NL + ++ HI+NN+
Sbjct: 180 SVFLDAHSTHNGAP*QSHSCLNRTTWANGHIWPNQATLTNLCSAVNYHISNNV 22
>gb|CF478251.1|CF478251 RTWW3_18_C07.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_18_C07_A022 3', mRNA sequence
Length = 573
Score = 244 bits (527), Expect = 5e-064
Identities = 97/109 (88%), Positives = 104/109 (95%)
Frame = +2 / +3
Query: 29 NVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHS 208
NV+V E+A+IGEGCLIGPDVAIGPGCV+E GVRLSRCTVMRGVRIKKHAC+S SIIGWH
Sbjct: 3 NVIVDETAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTVMRGVRIKKHACVSGSIIGWHC 182
Query: 209 TVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
TVGQWAR+ENMT+LGEDVHVCDEVYSNGGVVLPHKEIKSSI KPEIVM*
Sbjct: 183 TVGQWARVENMTVLGEDVHVCDEVYSNGGVVLPHKEIKSSITKPEIVM* 329
Score = 144 bits (308), Expect = 8e-034
Identities = 65/109 (59%), Positives = 76/109 (69%)
Frame = -3 / -3
Query: 357 AHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEM 178
+HMTISG +LDLISL G PR V+FS AH PTV+CQP+ML E
Sbjct: 331 SHMTISGLVILDLISLWGSTTPPLLYTSSQTCTSSPRTVMFSTLAHCPTVQCQPMMLPET 152
Query: 177 QACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTST 31
QACFLI TP MTVQR++LTP+S THPGP+ATSGPI+ PSPI A+S T T
Sbjct: 151 QACFLILTPLMTVQRDNLTPASITHPGPIATSGPIKHPSPI*AVSSTIT 5
Score = 101 bits (215), Expect = 5e-021
Identities = 44/109 (40%), Positives = 71/109 (65%)
Frame = -2 / -2
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+ L + D M +++T IA++LIT+M+ILP + H+ + PL NS +P ++A D
Sbjct: 329 SHDNFWLGDTGFDFLMGKHHTPIAIYLITNMHILP*NGHVFHSGPLPNSTMPTNDAPRDT 150
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHI 29
SML + ++ HD AA +PH L++ PR++ +I N F NL +L++ HI
Sbjct: 149 SMLFNPNSPHDRAARQPHPCLNHAPRTDCNIWPN*APFPNLSSLIYYHI 3
>gb|DR059112.1|DR059112 RTNIT1_15_F05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_15_F05_A029 5', mRNA sequence
Length = 716
Score = 237 bits (512), Expect = 6e-062
Identities = 93/118 (78%), Positives = 106/118 (89%)
Frame = +2 / -3
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G+ GNVL+ ES +IGEGCLIGPDV+IGPGC++E GVRLS C +M GVRIKKHAC+
Sbjct: 420 LASGSQFQGNVLIDESVQIGEGCLIGPDVSIGPGCIIEAGVRLSNCAIMSGVRIKKHACV 241
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SI+GWHSTVGQWAR ENMTILGEDVH+ DE+YSNGGVVLPHKEIKS+ILKPEIVM*
Sbjct: 240 SWSIVGWHSTVGQWARAENMTILGEDVHISDEIYSNGGVVLPHKEIKSNILKPEIVM* 67
Score = 148 bits (318), Expect = 3e-035
Identities = 74/130 (56%), Positives = 81/130 (62%)
Frame = -3 / +2
Query: 390 KLRMYCS*NWRAHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PT 211
+LR *+ HMTISG RMLDLISL G P+IVIFS AH PT
Sbjct: 32 QLRYISM*HKTFHMTISGLRMLDLISL*GSTTPPLLYISSLICTSSPKIVIFSALAHCPT 211
Query: 210 VECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTST 31
VECQP ML E QACFLI TP + Q ESLTP+S PGP+ TSGPIRQPSPI LS ST
Sbjct: 212 VECQPTMLHETQACFLILTPLIIAQFESLTPASIIQPGPIETSGPIRQPSPIWTLSSMST 391
Query: 30 LPTTCAPVAS 1
LP P+AS
Sbjct: 392 LP*N*EPLAS 421
Score = 111 bits (236), Expect = 6e-024
Identities = 52/110 (47%), Positives = 73/110 (66%)
Frame = -2 / +1
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+LRL+N DLFM ++T I V+LIT+M IL +SHIL P PL+N *+PA+ A *D
Sbjct: 67 SHDNLRLENVRFDLFMR*HHTTITVYLITYMYILT*NSHILCPSPLSNC*MPANYAP*DT 246
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIA 26
MLLD++ H+ + + + T + +IRTNQT F NL +++HIA
Sbjct: 247 GMLLDSNTTHNCTI*ESYPSFNYTAWTYRNIRTNQTAFPNLDTFINEHIA 396
>gb|DR110850.1|DR110850 RTS1_13_A01.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_13_A01_A029 5', mRNA sequence
Length = 665
Score = 237 bits (512), Expect = 6e-062
Identities = 93/118 (78%), Positives = 106/118 (89%)
Frame = +2 / -2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G+ GNVL+ ES +IGEGCLIGPDV+IGPGC++E GVRLS C +M GVRIKKHAC+
Sbjct: 475 LASGSQFQGNVLIDESVQIGEGCLIGPDVSIGPGCIIEAGVRLSNCAIMSGVRIKKHACV 296
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SI+GWHSTVGQWAR ENMTILGEDVH+ DE+YSNGGVVLPHKEIKS+ILKPEIVM*
Sbjct: 295 SWSIVGWHSTVGQWARAENMTILGEDVHISDEIYSNGGVVLPHKEIKSNILKPEIVM* 122
Score = 148 bits (318), Expect = 3e-035
Identities = 74/130 (56%), Positives = 81/130 (62%)
Frame = -3 / +3
Query: 390 KLRMYCS*NWRAHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PT 211
+LR *+ HMTISG RMLDLISL G P+IVIFS AH PT
Sbjct: 87 QLRYISM*HKTFHMTISGLRMLDLISL*GSTTPPLLYISSLICTSSPKIVIFSALAHCPT 266
Query: 210 VECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTST 31
VECQP ML E QACFLI TP + Q ESLTP+S PGP+ TSGPIRQPSPI LS ST
Sbjct: 267 VECQPTMLHETQACFLILTPLIIAQFESLTPASIIQPGPIETSGPIRQPSPIWTLSSMST 446
Query: 30 LPTTCAPVAS 1
LP P+AS
Sbjct: 447 LP*N*EPLAS 476
Score = 111 bits (236), Expect = 6e-024
Identities = 52/110 (47%), Positives = 73/110 (66%)
Frame = -2 / +2
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+LRL+N DLFM ++T I V+LIT+M IL +SHIL P PL+N *+PA+ A *D
Sbjct: 122 SHDNLRLENVRFDLFMR*HHTTITVYLITYMYILT*NSHILCPSPLSNC*MPANYAP*DT 301
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIA 26
MLLD++ H+ + + + T + +IRTNQT F NL +++HIA
Sbjct: 302 GMLLDSNTTHNCTI*ESYPSFNYTAWTYRNIRTNQTAFPNLDTFINEHIA 451
>gb|DR741980.1|DR741980 RTCU1_1_A06.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_1_A06_A029 3', mRNA sequence
Length = 557
Score = 237 bits (512), Expect = 6e-062
Identities = 93/118 (78%), Positives = 106/118 (89%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G+ GNVL+ ES +IGEGCLIGPDV+IGPGC++E GVRLS C +M GVRIKKHAC+
Sbjct: 52 LASGSQFQGNVLIDESVQIGEGCLIGPDVSIGPGCIIEAGVRLSNCAIMSGVRIKKHACV 231
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SI+GWHSTVGQWAR ENMTILGEDVH+ DE+YSNGGVVLPHKEIKS+ILKPEIVM*
Sbjct: 232 SWSIVGWHSTVGQWARAENMTILGEDVHISDEIYSNGGVVLPHKEIKSNILKPEIVM* 405
Score = 148 bits (318), Expect = 3e-035
Identities = 74/130 (56%), Positives = 81/130 (62%)
Frame = -3 / -1
Query: 390 KLRMYCS*NWRAHMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PT 211
+LR *+ HMTISG RMLDLISL G P+IVIFS AH PT
Sbjct: 440 QLRYISM*HKTFHMTISGLRMLDLISL*GSTTPPLLYISSLICTSSPKIVIFSALAHCPT 261
Query: 210 VECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTST 31
VECQP ML E QACFLI TP + Q ESLTP+S PGP+ TSGPIRQPSPI LS ST
Sbjct: 260 VECQPTMLHETQACFLILTPLIIAQFESLTPASIIQPGPIETSGPIRQPSPIWTLSSMST 81
Query: 30 LPTTCAPVAS 1
LP P+AS
Sbjct: 80 LP*N*EPLAS 51
Score = 111 bits (236), Expect = 6e-024
Identities = 52/110 (47%), Positives = 73/110 (66%)
Frame = -2 / -3
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHD+LRL+N DLFM ++T I V+LIT+M IL +SHIL P PL+N *+PA+ A *D
Sbjct: 405 SHDNLRLENVRFDLFMR*HHTTITVYLITYMYILT*NSHILCPSPLSNC*MPANYAP*DT 226
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIA 26
MLLD++ H+ + + + T + +IRTNQT F NL +++HIA
Sbjct: 225 GMLLDSNTTHNCTI*ESYPSFNYTAWTYRNIRTNQTAFPNLDTFINEHIA 76
>gb|CF664834.1|CF664834 RTCNT1_12_F03.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_12_F03_A029 3', mRNA sequence
Length = 637
Score = 204 bits (441), Expect = 3e-052
Identities = 82/90 (91%), Positives = 87/90 (96%)
Frame = +2 / +2
Query: 86 VAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVH 265
VAIGPGCV+E GVRLSRCT+MRGVRIKKHAC+S SIIGWHSTVGQWAR+ENMTILGEDVH
Sbjct: 2 VAIGPGCVIEAGVRLSRCTIMRGVRIKKHACVSGSIIGWHSTVGQWARVENMTILGEDVH 181
Query: 266 VCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
V DEVY+NGGVVLPHKEIKSSILKPEIVM*
Sbjct: 182 VSDEVYTNGGVVLPHKEIKSSILKPEIVM* 271
Score = 126 bits (269), Expect = 2e-028
Identities = 56/90 (62%), Positives = 64/90 (71%)
Frame = -3 / -2
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISG RMLDLISL GR P IV+FS RAH*PTVECQP++L + Q
Sbjct: 270 HMTISGLRMLDLISL*GRTTPPLVYTSSETWTSSPNIVMFSTRAH*PTVECQPMILPDTQ 91
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMAT 85
ACFL+RTPR+ V R+SLTP+S T PGPMAT
Sbjct: 90 ACFLMRTPRIMVHRDSLTPASITQPGPMAT 1
>gb|CF664918.1|CF664918 RTCNT1_12_F03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_12_F03_A029 5', mRNA sequence
Length = 552
Score = 155 bits (334), Expect(2) = 6e-047
Identities = 60/73 (82%), Positives = 68/73 (93%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LATG ++VGNV+V +A+IGEGCLIGPDVAIGPGCV+E GVRLSRCT+MRGVRIKKHAC+
Sbjct: 269 LATGVNIVGNVIVDSTAQIGEGCLIGPDVAIGPGCVIEAGVRLSRCTIMRGVRIKKHACV 448
Query: 182 SNSIIGWHSTVGQ 220
S SIIGWHSTVGQ
Sbjct: 449 SGSIIGWHSTVGQ 487
Score = 120 bits (256), Expect = 1e-026
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = -3 / -1
Query: 219 *PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSC 40
*PTVECQP++L + QACFL+RTPR+ V R+SLTP+S T PGPMATSGPI+QPSPI A+
Sbjct: 486 *PTVECQPMILPDTQACFLMRTPRIMVHRDSLTPASITQPGPMATSGPIKQPSPICAVLS 307
Query: 39 TSTLPTTCAPVAS 1
T T PT PVA+
Sbjct: 306 TITFPTMLTPVAN 268
Score = 51.9 bits (107), Expect(2) = 6e-047
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2 / +3
Query: 218 QWARIENMTILGEDVHVCDEVY 283
+WAR+ENMTILGEDVHV DEVY
Sbjct: 486 KWARVENMTILGEDVHVSDEVY 551
>gb|DR101601.1|DR101601 STRR1_74_B05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_B05_A033 5', mRNA sequence
Length = 745
Score = 187 bits (403), Expect = 6e-047
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LATG ++VGNV+V +A+IGEGCLIGPDVAIGPGC +E GVRLSRCT+MRGVRIKKHAC+
Sbjct: 485 LATGVNIVGNVIVDSTAQIGEGCLIGPDVAIGPGCAIEAGVRLSRCTIMRGVRIKKHACV 664
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDV 262
S SIIGWHSTVGQWAR+ENMTILGEDV
Sbjct: 665 SGSIIGWHSTVGQWARVENMTILGEDV 745
Score = 133 bits (284), Expect = 2e-030
Identities = 55/82 (67%), Positives = 65/82 (79%)
Frame = -3 / -2
Query: 246 IVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQ 67
IV+FS RAH PTVECQP++L + QACFL+RTPR+ V R+SLTP+S PGPMATSGPIRQ
Sbjct: 729 IVMFSTRAHWPTVECQPMILPDTQACFLMRTPRIMVHRDSLTPASIAQPGPMATSGPIRQ 550
Query: 66 PSPILALSCTSTLPTTCAPVAS 1
PSPI A+ T T PT PVA+
Sbjct: 549 PSPICAVLSTITFPTMLTPVAN 484
>gb|DR023886.1|DR023886 STRS1_60_E01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_60_E01_A034 5', mRNA sequence
Length = 537
Score = 126 bits (270), Expect = 1e-028
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
L+ GAH++GNV+V E+A IGEGCLIGPDVAIGPGCV+E GVRLS CTVMRGVRIKKHAC+
Sbjct: 352 LSFGAHIIGNVIVDETAHIGEGCLIGPDVAIGPGCVIEAGVRLSLCTVMRGVRIKKHACV 531
Query: 182 S 184
S
Sbjct: 532 S 534
>gb|CF665611.1|CF665611 RTCNT1_17_D03.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_17_D03_A029 3', mRNA sequence
Length = 644
Score = 107 bits (228), Expect = 8e-023
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +2 / -3
Query: 53 KIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARI 232
++G+G +G + G + GVRLSRCTVMRGVRIKKHAC+S SIIGWH TVGQWAR+
Sbjct: 195 RLGKGA*LGQMLQSVLGA*LRQGVRLSRCTVMRGVRIKKHACVSGSIIGWHCTVGQWARV 16
Query: 233 ENMTI 247
ENMT+
Sbjct: 15 ENMTV 1
Score = 81.7 bits (172), Expect(2) = 5e-021
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +2 / -2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDG 121
L+ GAH++GNV+V E+A+IGEGCLIGPDVAIGPGCV+E G
Sbjct: 247 LSFGAHIIGNVIVDETAQIGEGCLIGPDVAIGPGCVIEAG 128
Score = 39.1 bits (79), Expect(2) = 5e-021
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1 / -2
Query: 121 REAFPLHCHARRAYQEACLHLKQHYRLALNCWSMGTDREYD 243
RE LH H +ACL +H+ LAL CW+MG ++D
Sbjct: 127 REVVSLHGHEGS*D*KACLCFWEHHWLALYCWAMGQSGKHD 5
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 335,249,680
Number of Sequences: 355925
Number of extensions: 4657530
Number of successful extensions: 51912
Number of sequences better than 1.0e-020: 20
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 8626823200
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)