TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521459.2.4
(760 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO366784.1|CO366784 RTK1_30_C03.b1_A029 Roots minus pota... 264 2e-078
gb|DR024132.1|DR024132 STRS1_62_C08.g1_A034 Shoot tip pitch... 264 2e-078
gb|DR100836.1|DR100836 STRR1_68_D11.g1_A033 Stem Response R... 264 2e-078
gb|CF475712.1|CF475712 RTWW2_11_F05.g1_A021 Well-watered lo... 264 2e-078
gb|DT631887.1|DT631887 EST1146818 Normalized pine embryo li... 262 8e-078
gb|DR684091.1|DR684091 EST1074168 Normalized pine embryo li... 262 8e-078
gb|CO165801.1|CO165801 FLD1_57_E04.b1_A029 Root flooded Pin... 264 4e-075
gb|DR100804.1|DR100804 STRR1_68_D11.b1_A033 Stem Response R... 248 7e-074
gb|BX253798.1|BX253798 BX253798 Pinus pinaster differenciat... 260 2e-073
gb|BG317820.1|BG317820 NXPV_006_B01_F NXPV (Nsf Xylem Plani... 253 1e-068
gb|CO165812.1|CO165812 FLD1_57_F04.b1_A029 Root flooded Pin... 242 3e-063
gb|DR069285.1|DR069285 RTDK1_6_E03.b1_A029 Roots, dark Pinu... 238 3e-062
gb|DR024075.1|DR024075 STRS1_62_C08.b1_A034 Shoot tip pitch... 198 9e-059
gb|DR685785.1|DR685785 EST1075862 Normalized pine embryo li... 208 5e-053
gb|DT632919.1|DT632919 EST1147850 Normalized pine embryo li... 208 5e-053
gb|DR024254.1|DR024254 STRS1_63_D04.g1_A034 Shoot tip pitch... 206 2e-052
gb|CO162312.1|CO162312 FLD1_34_B10.g1_A029 Root flooded Pin... 205 3e-052
gb|DR024213.1|DR024213 STRS1_63_D04.b1_A034 Shoot tip pitch... 173 2e-051
gb|DR095848.1|DR095848 STRR1_24_B06.b1_A033 Stem Response R... 188 4e-047
gb|CF667838.1|CF667838 RTCNT1_32_G06.g1_A029 Root control P... 161 2e-046
gb|CO165868.1|CO165868 FLD1_57_E04.g1_A029 Root flooded Pin... 155 5e-046
gb|BQ701847.1|BQ701847 NXSI_121_C04_F NXSI (Nsf Xylem Side ... 184 7e-046
gb|DR025587.1|DR025587 STRS1_72_B09.g1_A034 Shoot tip pitch... 139 3e-041
gb|CO364393.1|CO364393 RTK1_15_A08.g1_A029 Roots minus pota... 138 1e-040
gb|DR069348.1|DR069348 RTDK1_6_E03.g1_A029 Roots, dark Pinu... 142 2e-040
gb|DR025125.1|DR025125 STRS1_69_F02.g1_A034 Shoot tip pitch... 139 1e-039
gb|DR054830.1|DR054830 RTCA1_19_G05.g1_A029 Roots minus cal... 159 3e-038
gb|CO197205.1|CO197205 GEO1_4_C10.g1_A029 Root gravitropism... 153 2e-036
gb|CO366854.1|CO366854 RTK1_30_C03.g1_A029 Roots minus pota... 153 2e-036
gb|DR165633.1|DR165633 RTPHOS1_6_H02.b1_A029 Roots minus ph... 123 2e-036
gb|AI813035.1|AI813035 20A4 Pine Lambda Zap Xylem library P... 145 4e-034
gb|CO170146.1|CO170146 NDL1_12_B03.b1_A029 Needles control ... 117 3e-033
gb|AW758562.1|AW758562 NXNV_085_E08_F Nsf Xylem Normal wood... 130 9e-030
gb|DR165931.1|DR165931 RTPHOS1_8_F02.b1_A029 Roots minus ph... 100 1e-029
gb|DR168264.1|DR168264 RTPHOS1_24_F12.b1_A029 Roots minus p... 68 4e-023
gb|BG317911.1|BG317911 NXPV_007_B08_F NXPV (Nsf Xylem Plani... 108 4e-023
gb|BI077254.1|BI077254 NXPV_094_G08_F NXPV (Nsf Xylem Plani... 108 4e-023
gb|DR054746.1|DR054746 RTCA1_19_G05.b1_A029 Roots minus cal... 78 7e-023
gb|DR025044.1|DR025044 STRS1_69_F02.b1_A034 Shoot tip pitch... 81 4e-022
gb|CO162234.1|CO162234 FLD1_34_B10.b1_A029 Root flooded Pin... 81 9e-022
gb|DR168338.1|DR168338 RTPHOS1_24_F12.g1_A029 Roots minus p... 88 9e-022
gb|CO165878.1|CO165878 FLD1_57_F04.g1_A029 Root flooded Pin... 74 1e-021
gb|DR687187.1|DR687187 EST1077266 Normalized pine embryo li... 102 3e-021
>gb|CO366784.1|CO366784 RTK1_30_C03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_C03_A029 3', mRNA sequence
Length = 853
Score = 264 bits (570), Expect(2) = 2e-078
Identities = 104/151 (68%), Positives = 123/151 (81%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 11 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 190
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+
Sbjct: 191 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREA 370
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 371 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 463
Score = 172 bits (371), Expect(2) = 4e-044
Identities = 85/149 (57%), Positives = 99/149 (66%)
Frame = +1 / -2
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 456 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 277
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 276 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 97
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS RS K GCSSG LYLPT SFSVS
Sbjct: 96 KGSCRSSGKNGCSSGLLYLPTFE*SFSVS 10
Score = 49.2 bits (101), Expect(2) = 2e-078
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 482 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 568
Score = 25.8 bits (50), Expect(2) = 4e-044
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -1
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 559 LNLFS*RHNPLCIKTSNQRRLNFV 488
>gb|DR024132.1|DR024132 STRS1_62_C08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_C08_A034 5', mRNA sequence
Length = 766
Score = 264 bits (570), Expect(2) = 2e-078
Identities = 104/151 (68%), Positives = 123/151 (81%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 140 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 319
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+
Sbjct: 320 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREA 499
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 500 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 592
Score = 172 bits (371), Expect(2) = 4e-044
Identities = 85/149 (57%), Positives = 99/149 (66%)
Frame = +1 / -2
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 585 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 406
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 405 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 226
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS RS K GCSSG LYLPT SFSVS
Sbjct: 225 KGSCRSSGKNGCSSGLLYLPTFE*SFSVS 139
Score = 49.2 bits (101), Expect(2) = 2e-078
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 611 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 697
Score = 25.8 bits (50), Expect(2) = 4e-044
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -1
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 688 LNLFS*RHNPLCIKTSNQRRLNFV 617
>gb|DR100836.1|DR100836 STRR1_68_D11.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_68_D11_A033 5', mRNA sequence
Length = 735
Score = 264 bits (570), Expect(2) = 2e-078
Identities = 104/151 (68%), Positives = 123/151 (81%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 162 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 341
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+
Sbjct: 342 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREA 521
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 522 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 614
Score = 172 bits (371), Expect(2) = 4e-044
Identities = 85/149 (57%), Positives = 99/149 (66%)
Frame = +1 / -3
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 607 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 428
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 427 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 248
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS RS K GCSSG LYLPT SFSVS
Sbjct: 247 KGSCRSSGKNGCSSGLLYLPTFE*SFSVS 161
Score = 49.2 bits (101), Expect(2) = 2e-078
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +3
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 633 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 719
Score = 25.8 bits (50), Expect(2) = 4e-044
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -2
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 710 LNLFS*RHNPLCIKTSNQRRLNFV 639
>gb|CF475712.1|CF475712 RTWW2_11_F05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_11_F05_A021 5', mRNA sequence
Length = 710
Score = 264 bits (570), Expect(2) = 2e-078
Identities = 104/151 (68%), Positives = 123/151 (81%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 98 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 277
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+
Sbjct: 278 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREA 457
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 458 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 550
Score = 172 bits (371), Expect(2) = 4e-044
Identities = 85/149 (57%), Positives = 99/149 (66%)
Frame = +1 / -3
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 543 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 364
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 363 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 184
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS RS K GCSSG LYLPT SFSVS
Sbjct: 183 KGSCRSSGKNGCSSGLLYLPTFE*SFSVS 97
Score = 49.2 bits (101), Expect(2) = 2e-078
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 569 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 655
Score = 25.8 bits (50), Expect(2) = 4e-044
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -2
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 646 LNLFS*RHNPLCIKTSNQRRLNFV 575
>gb|DT631887.1|DT631887 EST1146818 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFD90 3' end, mRNA sequence
Length = 842
Score = 262 bits (566), Expect(2) = 8e-078
Identities = 103/151 (68%), Positives = 122/151 (80%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 205 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 384
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI QDR+
Sbjct: 385 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRVQDREA 564
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 565 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 657
Score = 169 bits (364), Expect(2) = 4e-043
Identities = 83/149 (55%), Positives = 98/149 (65%)
Frame = +1 / -1
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S +AG + +S N ASATNFP*WIL
Sbjct: 650 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCTRIAGSYSFEESRNFASATNFP*WIL 471
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 470 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 291
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS +S K GCSSG LYLPT SFSVS
Sbjct: 290 KGSCKSSGKNGCSSGLLYLPTFE*SFSVS 204
Score = 49.2 bits (101), Expect(2) = 8e-078
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 676 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 762
Score = 25.8 bits (50), Expect(2) = 4e-043
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -3
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 753 LNLFS*RHNPLCIKTSNQRRLNFV 682
>gb|DR684091.1|DR684091 EST1074168 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAO79 3' end, mRNA sequence
Length = 780
Score = 262 bits (566), Expect(2) = 8e-078
Identities = 103/151 (68%), Positives = 122/151 (80%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 166 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 345
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI QDR+
Sbjct: 346 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRVQDREA 525
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 526 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 618
Score = 169 bits (364), Expect(2) = 4e-043
Identities = 83/149 (55%), Positives = 98/149 (65%)
Frame = +1 / -2
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S +AG + +S N ASATNFP*WIL
Sbjct: 611 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCTRIAGSYSFEESRNFASATNFP*WIL 432
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 431 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 252
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS +S K GCSSG LYLPT SFSVS
Sbjct: 251 KGSCKSSGKNGCSSGLLYLPTFE*SFSVS 165
Score = 49.2 bits (101), Expect(2) = 8e-078
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 637 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 723
Score = 25.8 bits (50), Expect(2) = 4e-043
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -1
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 714 LNLFS*RHNPLCIKTSNQRRLNFV 643
>gb|CO165801.1|CO165801 FLD1_57_E04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_E04_A029 3', mRNA sequence
Length = 788
Score = 264 bits (570), Expect(2) = 4e-075
Identities = 104/151 (68%), Positives = 123/151 (81%)
Frame = -3 / -3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 537 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 358
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+
Sbjct: 357 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREA 178
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 177 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 85
Score = 172 bits (371), Expect = 2e-042
Identities = 85/149 (57%), Positives = 99/149 (66%)
Frame = +1 / +2
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 92 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 271
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 272 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 451
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS RS K GCSSG LYLPT SFSVS
Sbjct: 452 KGSCRSSGKNGCSSGLLYLPTFE*SFSVS 538
Score = 38.2 bits (77), Expect(2) = 4e-075
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 275 PVYKIVPSLVAELYSYRIMPLT 210
PVYKI PSL+A LY+ +MPLT
Sbjct: 66 PVYKIQPSLIAGLYAQWVMPLT 1
>gb|DR100804.1|DR100804 STRR1_68_D11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_68_D11_A033 3', mRNA sequence
Length = 821
Score = 248 bits (537), Expect(2) = 7e-074
Identities = 98/144 (68%), Positives = 116/144 (80%)
Frame = -3 / +1
Query: 731 QVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRLVKE 552
+VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF ELLPR+
Sbjct: 1 KVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVELLPRIAAV 180
Query: 551 GSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTY 372
G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+ LMNLLT+
Sbjct: 181 GDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREALMNLLTF 360
Query: 371 ETVERAIEHRVEAKAKIFGQEVNI 300
E VE ++ RVE K +GQEVN+
Sbjct: 361 ENVEAMVQRRVELKTMTYGQEVNL 432
Score = 166 bits (356), Expect(2) = 4e-042
Identities = 80/141 (56%), Positives = 94/141 (66%)
Frame = +1 / -1
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 425 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 246
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 245 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 66
Query: 667 RGSGRSLEKKGCSSGPLYLPT 729
+GS RS K GCSSG LYLPT
Sbjct: 65 KGSCRSSGKNGCSSGLLYLPT 3
Score = 49.2 bits (101), Expect(2) = 7e-074
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 451 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 537
Score = 25.8 bits (50), Expect(2) = 4e-042
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -3
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 528 LNLFS*RHNPLCIKTSNQRRLNFV 457
>gb|BX253798.1|BX253798 BX253798 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP088F04, mRNA sequence
Length = 660
Score = 260 bits (563), Expect(2) = 2e-073
Identities = 103/151 (68%), Positives = 122/151 (80%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 125 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 304
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQD +
Sbjct: 305 LPRIAAMGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDGEA 484
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 485 LMNLLTFENVEAMVQRRVELKTMTYGQEVNL 577
Score = 171 bits (369), Expect = 4e-042
Identities = 85/149 (57%), Positives = 98/149 (65%)
Frame = +1 / -1
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 570 TS*PYVIVLSSTLLWTIASTFSKVNRFISASPSCARIAGSYSFEESRNFASATNFP*WIL 391
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACKQ S A+DP PS P G +S+KYI QISL +LI A GC T GYC GG+
Sbjct: 390 LEMACKQATSHTAVDP*FPSSPMAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGS 211
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GS RS K GCSSG LYLPT SFSVS
Sbjct: 210 KGSCRSSGKNGCSSGLLYLPTFE*SFSVS 124
Score = 35.9 bits (72), Expect(2) = 2e-073
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3 / +2
Query: 275 PVYKIVPSLVAELYSYRIMPL 213
PVYKI PSL+A LY+ +MPL
Sbjct: 596 PVYKIQPSLIAGLYAQWVMPL 658
>gb|BG317820.1|BG317820 NXPV_006_B01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_006_B01 5' similar to Arabidopsis
thaliana sequence At1g69370 chorismate mutase like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 600
Score = 253 bits (546), Expect(2) = 1e-068
Identities = 102/146 (69%), Positives = 117/146 (80%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 39 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 218
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR G DGN GS+A+CDT CLQALS+RIHYGKFVAEAKF+ SPE Y AI AQD++Q
Sbjct: 219 LPRFATTGDDGNYGSTAVCDTMCLQALSKRIHYGKFVAEAKFRGSPELYEVAIRAQDKEQ 398
Query: 392 LMNLLTYETVERAIEHRVEAKAKIFG 315
LMNLLT+E+VE A++ RV KAK +G
Sbjct: 399 LMNLLTFESVETAVQRRVXQKAKAYG 476
Score = 177 bits (380), Expect = 1e-043
Identities = 85/146 (58%), Positives = 99/146 (67%)
Frame = +1 / -3
Query: 316 PKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLES 495
P A TL A ST+S V +F+S S SWA +A +SG+ NLASATNFP* ILLE
Sbjct: 475 PYAFAFCXTLL*TAVSTLSNVSKFISCSLSWARIATSYSSGEPLNLASATNFP*CILLER 296
Query: 496 ACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGS 675
ACK +VSQ A+DP LPS P N G S YI QISL +LI+ A GC T GYC GG++GS
Sbjct: 295 ACKHMVSQTAVDP*LPSSPVVANRGSKLS*YILQISLFMLID*AAGCNTGGYCNGGSKGS 116
Query: 676 GRSLEKKGCSSGPLYLPTCAWSFSVS 753
G++ K GCSSG LYLPT AWS SVS
Sbjct: 115 GKASGKNGCSSGLLYLPTLAWSISVS 38
Score = 27.6 bits (54), Expect(2) = 1e-068
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -3 / +3
Query: 269 YKIVPSLVAELYSYRIMPLTK 207
YKI PSL L IMPLTK
Sbjct: 516 YKIQPSLXXXLXXDWIMPLTK 578
>gb|CO165812.1|CO165812 FLD1_57_F04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_F04_A029 3', mRNA sequence
Length = 527
Score = 242 bits (522), Expect = 3e-063
Identities = 95/134 (70%), Positives = 111/134 (82%)
Frame = -3 / -3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 408 ETEKLHSEVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 229
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+
Sbjct: 228 LPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREA 49
Query: 392 LMNLLTYETVERAI 351
LMNLLT+E VE +
Sbjct: 48 LMNLLTFENVEAMV 7
Score = 161 bits (346), Expect = 5e-039
Identities = 78/131 (59%), Positives = 89/131 (67%)
Frame = +1 / +2
Query: 361 STVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPAL 540
ST S V RF+S S S A +AG + +S N ASATNFP*WILLE ACKQ S A+DP
Sbjct: 17 STFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WILLEMACKQATSHTAVDP*F 196
Query: 541 PSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLY 720
PS P+ G +S+KYI QISL +LI A GC T GYC GG++GS RS K GCSSG LY
Sbjct: 197 PSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGSKGSCRSSGKNGCSSGLLY 376
Query: 721 LPTCAWSFSVS 753
LPT SFSVS
Sbjct: 377 LPTSE*SFSVS 409
>gb|DR069285.1|DR069285 RTDK1_6_E03.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_E03_A029 3', mRNA sequence
Length = 879
Score = 238 bits (515), Expect = 3e-062
Identities = 96/134 (71%), Positives = 109/134 (81%)
Frame = -3 / -1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 402 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 223
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
LPR G DGN GS+A+CDT CLQALS+RIHYGKFVAEAKF+ SPE Y AI AQD++Q
Sbjct: 222 LPRFATTGDDGNYGSTAVCDTMCLQALSKRIHYGKFVAEAKFRGSPELYEVAIRAQDKEQ 43
Query: 392 LMNLLTYETVERAI 351
LMNLLT+E+VE A+
Sbjct: 42 LMNLLTFESVETAV 1
Score = 171 bits (369), Expect = 4e-042
Identities = 81/133 (60%), Positives = 95/133 (71%)
Frame = +1 / +2
Query: 355 ARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDP 534
A ST+S V +F+S S SWA +A +SG+ NLASATNFP* ILLE ACK +VSQ A+DP
Sbjct: 5 AVSTLSNVSKFISCSLSWARIATSYSSGEPLNLASATNFP*CILLERACKHMVSQTAVDP 184
Query: 535 ALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGP 714
LPS P N G S YI QISL +LI+ A GC T GYC GG++GSG++ K GCSSG
Sbjct: 185 *LPSSPVVANRGSKLS*YILQISLFMLID*AAGCNTGGYCNGGSKGSGKASGKNGCSSGL 364
Query: 715 LYLPTCAWSFSVS 753
LYLPT AWS SVS
Sbjct: 365 LYLPTLAWSISVS 403
>gb|DR024075.1|DR024075 STRS1_62_C08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_C08_A034 3', mRNA sequence
Length = 763
Score = 198 bits (427), Expect(2) = 9e-059
Identities = 79/119 (66%), Positives = 95/119 (79%)
Frame = -3 / +2
Query: 656 MQYPRVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALSRRIH 477
+QYP+VLHP A +ININKEIW MYF ELLPR+ G DGN GS+A+CD CLQA+SRRIH
Sbjct: 2 LQYPQVLHPAASNININKEIWTMYFVELLPRIAAVGDDGNYGSTAVCDVACLQAISRRIH 181
Query: 476 YGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
YGKFVAEAKF++S + Y PAI AQDR+ LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 182 YGKFVAEAKFRDSSKEYEPAIRAQDREALMNLLTFENVEAMVQRRVELKTMTYGQEVNL 358
Score = 128 bits (274), Expect(2) = 7e-031
Identities = 63/116 (54%), Positives = 75/116 (64%)
Frame = +1 / -2
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 351 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 172
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYC 654
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC
Sbjct: 171 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYC 4
Score = 49.2 bits (101), Expect(2) = 9e-059
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 377 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 463
Score = 25.8 bits (50), Expect(2) = 7e-031
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -1
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 454 LNLFS*RHNPLCIKTSNQRRLNFV 383
>gb|DR685785.1|DR685785 EST1075862 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB785 3' end, mRNA sequence
Length = 784
Score = 208 bits (448), Expect = 5e-053
Identities = 84/116 (72%), Positives = 92/116 (79%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 404 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 583
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
LPR G DGN GS+A+CDT CLQALS+RIHYGKFVAEAKF+ SPE Y AI AQ
Sbjct: 584 LPRFATTGDDGNYGSTAVCDTMCLQALSKRIHYGKFVAEAKFRGSPELYEVAIRAQ 751
Score = 159 bits (342), Expect = 2e-038
Identities = 73/119 (61%), Positives = 85/119 (71%)
Frame = +1 / -2
Query: 397 SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRS 576
S+ WA +A +SG+ NLASATNFP* ILLE ACK +VSQ A+DP LPS P N G
Sbjct: 759 SQHWARIATSYSSGEPLNLASATNFP*CILLERACKHMVSQTAVDP*LPSSPVVANRGSK 580
Query: 577 SSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
S YI QISL +LI+ A GC T GYC GG++GSG++ K GCSSG LYLPT AWS SVS
Sbjct: 579 LS*YILQISLFMLID*AAGCNTGGYCNGGSKGSGKASGKNGCSSGLLYLPTLAWSISVS 403
>gb|DT632919.1|DT632919 EST1147850 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFP19 3' end, mRNA sequence
Length = 791
Score = 208 bits (448), Expect = 5e-053
Identities = 84/116 (72%), Positives = 92/116 (79%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 412 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 591
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
LPR G DGN GS+A+CDT CLQALS+RIHYGKFVAEAKF+ SPE Y AI AQ
Sbjct: 592 LPRFATTGDDGNYGSTAVCDTMCLQALSKRIHYGKFVAEAKFRGSPELYEVAIRAQ 759
Score = 159 bits (342), Expect = 2e-038
Identities = 73/119 (61%), Positives = 85/119 (71%)
Frame = +1 / -1
Query: 397 SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRS 576
S+ WA +A +SG+ NLASATNFP* ILLE ACK +VSQ A+DP LPS P N G
Sbjct: 767 SQHWARIATSYSSGEPLNLASATNFP*CILLERACKHMVSQTAVDP*LPSSPVVANRGSK 588
Query: 577 SSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
S YI QISL +LI+ A GC T GYC GG++GSG++ K GCSSG LYLPT AWS SVS
Sbjct: 587 LS*YILQISLFMLID*AAGCNTGGYCNGGSKGSGKASGKNGCSSGLLYLPTLAWSISVS 411
>gb|DR024254.1|DR024254 STRS1_63_D04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_63_D04_A034 5', mRNA sequence
Length = 749
Score = 206 bits (444), Expect = 2e-052
Identities = 80/113 (70%), Positives = 94/113 (83%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 408 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 587
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAI 414
LPR+ G DGN GS+A+CD CLQA+SR+IHYGKFVAEAKF++S + Y AI
Sbjct: 588 LPRIAAVGDDGNYGSTAVCDVACLQAISRKIHYGKFVAEAKFRDSSKEYELAI 746
Score = 144 bits (308), Expect = 9e-034
Identities = 65/105 (61%), Positives = 73/105 (69%)
Frame = +1 / -2
Query: 439 DS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILI 618
+S N ASATNFP*WI LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI
Sbjct: 721 ESRNFASATNFP*WIFLEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLI 542
Query: 619 ESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
A GC T GYC GG++GS RS K GCSSG LYLPT SFSVS
Sbjct: 541 LEAAGCSTCGYCKGGSKGSCRSSGKNGCSSGLLYLPTFE*SFSVS 407
>gb|CO162312.1|CO162312 FLD1_34_B10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_B10_A029 5', mRNA sequence
Length = 827
Score = 205 bits (442), Expect = 3e-052
Identities = 82/113 (72%), Positives = 90/113 (79%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 489 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 668
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAI 414
LPR G DGN GS+A+CDT CLQALS+RIHYGKFVAEAKF+ SPE Y AI
Sbjct: 669 LPRFATTGDDGNYGSTAVCDTMCLQALSKRIHYGKFVAEAKFRGSPELYEVAI 827
Score = 153 bits (329), Expect = 1e-036
Identities = 69/108 (63%), Positives = 79/108 (73%)
Frame = +1 / -2
Query: 430 ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLL 609
+SG+ NLASATNFP* ILLE ACK +VSQ A+DP LPS P N G S YI QISL
Sbjct: 811 SSGEPLNLASATNFP*CILLERACKHMVSQTAVDP*LPSSPVVANRGSKLS*YILQISLF 632
Query: 610 ILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+LI+ A GC T GYC GG++GSG++ K GCSSG LYLPT AWS SVS
Sbjct: 631 MLID*AAGCNTGGYCNGGSKGSGKASGKNGCSSGLLYLPTLAWSISVS 488
>gb|DR024213.1|DR024213 STRS1_63_D04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_63_D04_A034 3', mRNA sequence
Length = 778
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 71/109 (65%), Positives = 85/109 (77%)
Frame = -3 / +3
Query: 626 ADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKF 447
A +ININKEIW MYF ELLPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF
Sbjct: 3 ASNININKEIWTMYFVELLPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKF 182
Query: 446 QESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
++S + Y AI AQDR+ LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 183 RDSSKEYELAIRAQDREALMNLLTFENVEAMVQRRVELKTMTYGQEVNL 329
Score = 107 bits (228), Expect(2) = 1e-024
Identities = 56/107 (52%), Positives = 68/107 (63%)
Frame = +1 / -1
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +A + +S N ASATNFP*WIL
Sbjct: 322 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIASSYSFEESRNFASATNFP*WIL 143
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESA 627
LE ACKQ S A+DP PS P+ G +S+KYI QISL +LI A
Sbjct: 142 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEA 2
Score = 49.2 bits (101), Expect(2) = 2e-051
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +3
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 348 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 434
Score = 25.8 bits (50), Expect(2) = 1e-024
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / -3
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 425 LNLFS*RHNPLCIKTSNQRRLNFV 354
>gb|DR095848.1|DR095848 STRR1_24_B06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_24_B06_A033 3', mRNA sequence
Length = 779
Score = 188 bits (405), Expect = 4e-047
Identities = 74/100 (74%), Positives = 81/100 (81%)
Frame = -3 / -1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 302 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 123
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEA 453
LPR G DGN GS+A+CDT CLQALS+RIHYGKFVAEA
Sbjct: 122 LPRFATTGDDGNYGSTAVCDTMCLQALSKRIHYGKFVAEA 3
Score = 147 bits (315), Expect = 1e-034
Identities = 66/101 (65%), Positives = 74/101 (73%)
Frame = +1 / +1
Query: 451 LASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAM 630
LASATNFP* ILLE ACK +VSQ A+DP LPS P N G S YI QISL +LI+ A
Sbjct: 1 LASATNFP*CILLERACKHMVSQTAVDP*LPSSPVVANRGSKLS*YILQISLFMLID*AA 180
Query: 631 GCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
GC T GYC GG++GSG++ K GCSSG LYLPT AWS SVS
Sbjct: 181 GCNTGGYCNGGSKGSGKASGKNGCSSGLLYLPTLAWSISVS 303
>gb|CF667838.1|CF667838 RTCNT1_32_G06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_32_G06_A029 5', mRNA sequence
Length = 781
Score = 161 bits (347), Expect(2) = 2e-046
Identities = 63/89 (70%), Positives = 70/89 (78%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 444 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 623
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSR 486
LPR G DGN GS+A+CDT CLQALS+
Sbjct: 624 LPRFATTGDDGNYGSTAVCDTMCLQALSK 710
Score = 125 bits (268), Expect(2) = 1e-031
Identities = 55/89 (61%), Positives = 63/89 (70%)
Frame = +1 / -1
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGN 666
LE ACK +VSQ A+DP LPS P N G S YI QISL +LI+ A GC T GYC GG+
Sbjct: 709 LERACKHMVSQTAVDP*LPSSPVVANRGSKLS*YILQISLFMLID*AAGCNTGGYCNGGS 530
Query: 667 RGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+GSG++ K GCSSG LYLPT AWS SVS
Sbjct: 529 KGSGKASGKNGCSSGLLYLPTLAWSISVS 443
Score = 44.6 bits (91), Expect(2) = 2e-046
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3 / +2
Query: 488 RRIHYGKFVAEAKFQESPEAY 426
+RIHYGKFVAEAKF+ SPE Y
Sbjct: 707 QRIHYGKFVAEAKFRGSPELY 769
Score = 30.9 bits (61), Expect(2) = 1e-031
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1 / -2
Query: 430 ASGDS*NLASATNFP*WIL 486
+SG+ NLASATNFP* IL
Sbjct: 765 SSGEPLNLASATNFP*CIL 709
>gb|CO165868.1|CO165868 FLD1_57_E04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_E04_A029 5', mRNA sequence
Length = 877
Score = 155 bits (334), Expect(2) = 5e-046
Identities = 63/97 (64%), Positives = 76/97 (78%)
Frame = -3 / -2
Query: 590 MYFDELLPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAII 411
MYF ELLPR+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI
Sbjct: 873 MYFVELLPRIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIR 694
Query: 410 AQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
AQDR+ LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 693 AQDREALMNLLTFENVEAMVQRRVELKTMTYGQEVNL 583
Score = 98.2 bits (208), Expect(2) = 7e-022
Identities = 50/95 (52%), Positives = 61/95 (64%)
Frame = +1 / +2
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TS P ++ L+STL ST S V RF+S S S A +AG + +S N ASATNFP*WIL
Sbjct: 590 TS*PYVIVLSSTLLWTIASTFSKVNRFISASLSCARIAGSYSFEESRNFASATNFP*WIL 769
Query: 487 LESACKQVVSQRALDPALPSLPSFTNLGRSSSKYI 591
LE ACKQ S A+DP PS P+ G +S+KYI
Sbjct: 770 LEMACKQATSHTAVDP*FPSSPTAAIRGSNSTKYI 874
Score = 49.2 bits (101), Expect(2) = 5e-046
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 564 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 478
Score = 25.8 bits (50), Expect(2) = 7e-022
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 198 LNLFG*RHDSVAVQLGDQARNDLV 269
LNLF *RH+ + ++ +Q R + V
Sbjct: 487 LNLFS*RHNPLCIKTSNQRRLNFV 558
>gb|BQ701847.1|BQ701847 NXSI_121_C04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_C04 5' similar to Arabidopsis thaliana
sequence At3g29200 chorismate mutase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 551
Score = 184 bits (396), Expect = 7e-046
Identities = 76/116 (65%), Positives = 84/116 (72%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 204 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 383
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQ 405
L G DGN GS+A+CDT LS+ HYGKFVAEAKF+ SPE Y AI AQ
Sbjct: 384 LXXXAXTGDDGNYGSTAVCDTMXXXXLSKXXHYGKFVAEAKFRXSPELYEVAIRAQ 551
Score = 139 bits (299), Expect = 2e-032
Identities = 66/116 (56%), Positives = 77/116 (66%)
Frame = +1 / -2
Query: 406 WAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSK 585
WA +A +SG+ NLASATNFP* LLE +VSQ A+DP LPS P S
Sbjct: 550 WARIATSYSSGEXLNLASATNFP*CXLLERXXXXMVSQTAVDP*LPSSPVXAXXXSKLS* 371
Query: 586 YIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
YI QISL +LI+ A GC T GYC GG++GSG++ K GCSSG LYLPT AWS SVS
Sbjct: 370 YILQISLFMLID*AAGCNTGGYCNGGSKGSGKASGKNGCSSGLLYLPTLAWSISVS 203
>gb|DR025587.1|DR025587 STRS1_72_B09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_72_B09_A034 5', mRNA sequence
Length = 698
Score = 139 bits (299), Expect(2) = 3e-041
Identities = 56/89 (62%), Positives = 69/89 (77%)
Frame = -3 / -2
Query: 566 RLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLM 387
R+ G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+ LM
Sbjct: 697 RIAAVGDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREALM 518
Query: 386 NLLTYETVERAIEHRVEAKAKIFGQEVNI 300
NLLT+E VE ++ RVE K +GQEVN+
Sbjct: 517 NLLTFENVEAMVQRRVELKTMTYGQEVNL 431
Score = 49.2 bits (101), Expect(2) = 3e-041
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / -2
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 412 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 326
>gb|CO364393.1|CO364393 RTK1_15_A08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_A08_A029 5', mRNA sequence
Length = 866
Score = 138 bits (295), Expect(2) = 1e-040
Identities = 55/84 (65%), Positives = 67/84 (79%)
Frame = -3 / -3
Query: 551 GSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTY 372
G DGN GS+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+ LMNLLT+
Sbjct: 852 GDDGNYGSTAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREALMNLLTF 673
Query: 371 ETVERAIEHRVEAKAKIFGQEVNI 300
E VE ++ RVE K +GQEVN+
Sbjct: 672 ENVEAMVQRRVELKTMTYGQEVNL 601
Score = 49.2 bits (101), Expect(2) = 1e-040
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / -3
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 582 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 496
>gb|DR069348.1|DR069348 RTDK1_6_E03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_E03_A029 5', mRNA sequence
Length = 874
Score = 142 bits (304), Expect(2) = 2e-040
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = -3 / -2
Query: 551 GSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTY 372
G DGN GS+A+CDT CLQALS+RIHYGKFVAEAKF+ SPE Y AI AQD++QLMNLLT+
Sbjct: 867 GDDGNYGSTAVCDTMCLQALSKRIHYGKFVAEAKFRGSPELYEVAIRAQDKEQLMNLLTF 688
Query: 371 ETVERAIEHRVEAKAKIFGQEVNI 300
E+VE A++ RVE KAK +G EV++
Sbjct: 687 ESVETAVQRRVEQKAKAYGLEVSL 616
Score = 44.1 bits (90), Expect(2) = 2e-040
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -3 / -2
Query: 308 VNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
+ + ++ + YKI PSL+A LY IMPLTK VQ+ Y
Sbjct: 630 LEVSLDTTKADSTYKIQPSLIANLYGDWIMPLTKMVQVEY 511
>gb|DR025125.1|DR025125 STRS1_69_F02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_F02_A034 5', mRNA sequence
Length = 695
Score = 139 bits (298), Expect(2) = 1e-039
Identities = 57/82 (69%), Positives = 70/82 (85%)
Frame = -3 / +2
Query: 545 DGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYET 366
DGN GS+A+CDT CLQALS+RIHYGKFVAEAKF+ SPE Y AI AQD++QLMNLLT+E+
Sbjct: 2 DGNYGSTAVCDTMCLQALSKRIHYGKFVAEAKFRGSPELYEVAIRAQDKEQLMNLLTFES 181
Query: 365 VERAIEHRVEAKAKIFGQEVNI 300
VE A++ RVE KAK +G EV++
Sbjct: 182 VETAVQRRVEQKAKAYGLEVSL 247
Score = 44.1 bits (90), Expect(2) = 1e-039
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -3 / +2
Query: 308 VNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
+ + ++ + YKI PSL+A LY IMPLTK VQ+ Y
Sbjct: 233 LEVSLDTTKADSTYKIQPSLIANLYGDWIMPLTKMVQVEY 352
>gb|DR054830.1|DR054830 RTCA1_19_G05.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_19_G05_A029 5', mRNA sequence
Length = 701
Score = 159 bits (341), Expect = 3e-038
Identities = 60/84 (71%), Positives = 69/84 (82%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 449 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 628
Query: 572 LPRLVKEGSDGNAGSSALCDTTCL 501
LPR+ G DGN GS+A+CD CL
Sbjct: 629 LPRIAAVGDDGNYGSTAVCDVACL 700
Score = 106 bits (227), Expect = 1e-022
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +1 / -3
Query: 502 KQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGR 681
KQ S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG++GS R
Sbjct: 699 KQATSHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGSKGSCR 520
Query: 682 SLEKKGCSSGPLYLPTCAWSFSVS 753
S K GCSSG LYLPT SFSVS
Sbjct: 519 SSGKNGCSSGLLYLPTFE*SFSVS 448
>gb|CO197205.1|CO197205 GEO1_4_C10.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_4_C10_A029 5', mRNA sequence
Length = 772
Score = 153 bits (328), Expect = 2e-036
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 521 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 700
Query: 572 LPRLVKEGSDGNAGSSALCDTTCL 501
LPR G DGN GS+A+CDT CL
Sbjct: 701 LPRFATTGDDGNYGSTAVCDTMCL 772
Score = 116 bits (247), Expect = 2e-025
Identities = 51/84 (60%), Positives = 59/84 (70%)
Frame = +1 / -2
Query: 502 KQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGR 681
K +VSQ A+DP LPS P N G S YI QISL +LI+ A GC T GYC GG++GSG+
Sbjct: 771 KHMVSQTAVDP*LPSSPVVANRGSKLS*YILQISLFMLID*AAGCNTGGYCNGGSKGSGK 592
Query: 682 SLEKKGCSSGPLYLPTCAWSFSVS 753
+ K GCSSG LYLPT AWS SVS
Sbjct: 591 ASGKNGCSSGLLYLPTLAWSISVS 520
>gb|CO366854.1|CO366854 RTK1_30_C03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_C03_A029 5', mRNA sequence
Length = 837
Score = 153 bits (328), Expect = 2e-036
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININKEIW MYF EL
Sbjct: 597 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININKEIWTMYFVEL 776
Query: 572 LPRLVKEGSDGNAGSSALCD 513
LPR+ G DGN GS+A+CD
Sbjct: 777 LPRIAAVGDDGNYGSTAVCD 836
Score = 102 bits (217), Expect = 3e-021
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +1 / -3
Query: 514 SQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEK 693
S A+DP PS P+ G +S+KYI QISL +LI A GC T GYC GG++GS RS K
Sbjct: 835 SHTAVDP*FPSSPTAAIRGSNSTKYIVQISLFMLILEAAGCSTCGYCKGGSKGSCRSSGK 656
Query: 694 KGCSSGPLYLPTCAWSFSVS 753
GCSSG LYLPT SFSVS
Sbjct: 655 NGCSSGLLYLPTFE*SFSVS 596
>gb|DR165633.1|DR165633 RTPHOS1_6_H02.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_6_H02_A029 3', mRNA sequence
Length = 929
Score = 123 bits (263), Expect(2) = 2e-036
Identities = 49/76 (64%), Positives = 61/76 (80%)
Frame = -3 / +1
Query: 527 SALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIE 348
+A+CD CLQA+SRRIHYGKFVAEAKF++S + Y PAI AQDR+ LMNLLT+E VE ++
Sbjct: 1 TAVCDVACLQAISRRIHYGKFVAEAKFRDSSKEYEPAIRAQDREALMNLLTFENVEAMVQ 180
Query: 347 HRVEAKAKIFGQEVNI 300
RVE K +GQEVN+
Sbjct: 181 RRVELKTMTYGQEVNL 228
Score = 49.2 bits (101), Expect(2) = 2e-036
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 247 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 333
>gb|AI813035.1|AI813035 20A4 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 526
Score = 145 bits (311), Expect = 4e-034
Identities = 56/80 (70%), Positives = 62/80 (77%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D L
Sbjct: 286 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSL 465
Query: 572 LPRLVKEGSDGNAGSSALCD 513
LPR G DGN GS+A+CD
Sbjct: 466 LPRFATTGDDGNYGSTAVCD 525
Score = 111 bits (237), Expect = 6e-024
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +1 / -3
Query: 514 SQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEK 693
SQ A+DP LPS P N G S YI QISL +LI+ A GC T GYC GG++GSG++ K
Sbjct: 524 SQTAVDP*LPSSPVVANRGSKLS*YILQISLFMLID*AAGCNTGGYCNGGSKGSGKASGK 345
Query: 694 KGCSSGPLYLPTCAWSFSVS 753
GCSSG LYLPT AWS SVS
Sbjct: 344 NGCSSGLLYLPTLAWSISVS 285
>gb|CO170146.1|CO170146 NDL1_12_B03.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_12_B03_A029 3', mRNA sequence
Length = 454
Score = 117 bits (251), Expect(2) = 3e-033
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = -3 / +1
Query: 512 TTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEA 333
T CLQALS+RIHYGKFVAEAKF+ SPE Y AI AQD++QLMNLLT+E+VE A++ RVE
Sbjct: 1 TMCLQALSKRIHYGKFVAEAKFRGSPELYEVAIRAQDKEQLMNLLTFESVETAVQRRVEQ 180
Query: 332 KAKIFGQEVNI 300
KAK +G EV++
Sbjct: 181 KAKAYGLEVSL 213
Score = 44.1 bits (90), Expect(2) = 3e-033
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -3 / +1
Query: 308 VNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
+ + ++ + YKI PSL+A LY IMPLTK VQ+ Y
Sbjct: 199 LEVSLDPTKADSTYKIQPSLIANLYGDWIMPLTKMVQVEY 318
>gb|AW758562.1|AW758562 NXNV_085_E08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_085_E08 5' similar to Arabidopsis thaliana
sequence At3g29200 chorismate mutase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 238
Score = 130 bits (279), Expect = 9e-030
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = -3 / +3
Query: 740 LHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRL 561
LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW MY+D LLP
Sbjct: 6 LHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWSMYYDSLLPXX 185
Query: 560 VKEGSDGNAGSSALCDT 510
G D G +A+CDT
Sbjct: 186 ATTGDDXXYGXTAVCDT 236
>gb|DR165931.1|DR165931 RTPHOS1_8_F02.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_F02_A029 3', mRNA sequence
Length = 885
Score = 100 bits (214), Expect(2) = 1e-029
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -3 / +1
Query: 488 RRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQE 309
RRIHYGKFVAEAKF++S + Y PAI AQDR+ LMNLLT+E VE ++ RVE K +GQE
Sbjct: 1 RRIHYGKFVAEAKFRDSSKEYEPAIRAQDREALMNLLTFENVEAMVQRRVELKTMTYGQE 180
Query: 308 VNI 300
VN+
Sbjct: 181 VNL 189
Score = 49.2 bits (101), Expect(2) = 1e-029
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 208 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 294
>gb|DR168264.1|DR168264 RTPHOS1_24_F12.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_24_F12_A029 3', mRNA sequence
Length = 620
Score = 67.5 bits (141), Expect(4) = 4e-023
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -3 / -2
Query: 545 DGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLL 378
DGN GS+A D LQA+S+R+HYGKFV+E+KF P A+ P I +R L L+
Sbjct: 169 DGNYGSAATLDVEVLQAISKRVHYGKFVSESKFVSDPAAFIPHIQNPNRPALEGLI 2
Score = 35.4 bits (71), Expect(4) = 4e-023
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 752 ETEKLHAQVGRYKGPDEHPFFS 687
ETE HA+ RY PDE+PF S
Sbjct: 427 ETEAFHAKARRYTSPDEYPFTS 362
Score = 33.6 bits (67), Expect(4) = 4e-023
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 692 FSKDLPEPRLPPMQYPRVLHPIADSIN 612
F+ +LPEP L P+ +P++L+P + + N
Sbjct: 370 FTSNLPEPVLKPVDFPQILYPNSINAN 290
Score = 26.3 bits (51), Expect(4) = 4e-023
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3 / -2
Query: 623 DSININKEIWKMYFDELLPRLVKEGS 546
+SIN N+ I Y +++PR+ K +
Sbjct: 307 NSINANRSIVSFYTRQIVPRITKRST 230
>gb|BG317911.1|BG317911 NXPV_007_B08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_007_B08 5' similar to Arabidopsis
thaliana sequence At3g29200 chorismate mutase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 536
Score = 108 bits (231), Expect = 4e-023
Identities = 44/74 (59%), Positives = 47/74 (63%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ET LHA+VGRYK DEHPFF L P PP+QYP P A ININK IW MY+D L
Sbjct: 313 ETXXLHAKVGRYKXXDEHPFFPDALXXPLXPPLQYPTXXAPAAQXININKLIWSMYYDSL 492
Query: 572 LPRLVKEGSDGNAG 531
LPR G DGN G
Sbjct: 493 LPRXATTGDDGNYG 534
>gb|BI077254.1|BI077254 NXPV_094_G08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_094_G08 5' similar to Arabidopsis
thaliana sequence At1g69370 chorismate mutase like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 510
Score = 108 bits (231), Expect = 4e-023
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = -3 / +1
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFD 579
ETE LHA+VGRYK PDEHPFF LP+P LPP+QYP VLHP A SININK IW M +D
Sbjct: 313 ETEILHAKVGRYKSPDEHPFFPDALPDPLLPPLQYPPVLHPAAQSININKLIWXMXYD 486
>gb|DR054746.1|DR054746 RTCA1_19_G05.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_19_G05_A029 3', mRNA sequence
Length = 621
Score = 78.0 bits (164), Expect(2) = 7e-023
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = -3 / +2
Query: 461 AEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
AEAKF++S + Y PAI AQDR+ LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 2 AEAKFRDSSKEYEPAIRAQDREALMNLLTFENVEAMVQRRVELKTMTYGQEVNL 163
Score = 49.2 bits (101), Expect(2) = 7e-023
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 182 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 268
>gb|DR025044.1|DR025044 STRS1_69_F02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_F02_A034 3', mRNA sequence
Length = 907
Score = 80.8 bits (170), Expect(2) = 4e-022
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = -3 / +1
Query: 461 AEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
AEAKF+ SPE Y AI AQD++QLMNLLT+E+VE A++ RVE KAK +G EV++
Sbjct: 1 AEAKFRGSPELYEVAIRAQDKEQLMNLLTFESVETAVQRRVEQKAKAYGLEVSL 162
Score = 44.1 bits (90), Expect(2) = 4e-022
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -3 / +1
Query: 308 VNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
+ + ++ + YKI PSL+A LY IMPLTK VQ+ Y
Sbjct: 148 LEVSLDTTKADSTYKIQPSLIANLYGDWIMPLTKMVQVEY 267
>gb|CO162234.1|CO162234 FLD1_34_B10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_B10_A029 3', mRNA sequence
Length = 712
Score = 80.8 bits (170), Expect(2) = 9e-022
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = -3 / +2
Query: 461 AEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
AEAKF+ SPE Y AI AQD++QLMNLLT+E+VE A++ RVE KAK +G EV++
Sbjct: 2 AEAKFRGSPELYEVAIRAQDKEQLMNLLTFESVETAVQRRVEQKAKAYGLEVSL 163
Score = 42.8 bits (87), Expect(2) = 9e-022
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / +3
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YKI PSL+A LY IMPLTK VQ+ Y
Sbjct: 189 YKIQPSLIANLYGDWIMPLTKMVQVEY 269
>gb|DR168338.1|DR168338 RTPHOS1_24_F12.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_24_F12_A029 5', mRNA sequence
Length = 633
Score = 87.7 bits (185), Expect(2) = 9e-022
Identities = 38/80 (47%), Positives = 51/80 (63%)
Frame = -3 / -1
Query: 545 DGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYET 366
DGN GS+A D LQA+S+R+HYGKFV+E+KF P A+ P I +R L L+T
Sbjct: 558 DGNYGSAATLDVEVLQAISKRVHYGKFVSESKFVSDPAAFIPHIQNPNRPALEGLITKPE 379
Query: 365 VERAIEHRVEAKAKIFGQEV 306
VER + R+ KA I+ Q+V
Sbjct: 378 VERKLLQRLRKKATIYAQDV 319
Score = 35.9 bits (72), Expect(2) = 9e-022
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3 / -1
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YKI V ELY + I+PLTKEV++ Y
Sbjct: 285 YKIDVDGVVELYEHYIIPLTKEVEVDY 205
>gb|CO165878.1|CO165878 FLD1_57_F04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_F04_A029 5', mRNA sequence
Length = 706
Score = 73.9 bits (155), Expect(2) = 1e-021
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = -3 / -3
Query: 455 AKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNI 300
AKF++S + Y PAI AQDR+ LMNLLT+E VE ++ RVE K +GQEVN+
Sbjct: 704 AKFRDSSKEYEPAIRAQDREALMNLLTFENVEAMVQRRVELKTMTYGQEVNL 549
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3 / -3
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSL+A LY+ +MPLTK+VQ+ Y
Sbjct: 530 PVYKIQPSLIAGLYAQWVMPLTKKVQVEY 444
>gb|DR687187.1|DR687187 EST1077266 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABO44 3' end, mRNA sequence
Length = 731
Score = 102 bits (217), Expect = 3e-021
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININK 603
ETEKLH++VGRYK PDEHPFF +DL EP LPP+QYP+VLHP A +ININK
Sbjct: 561 ETEKLHSKVGRYKSPDEHPFFPEDLQEPLLPPLQYPQVLHPAASNININK 710
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 507,546,233
Number of Sequences: 355925
Number of extensions: 9052892
Number of successful extensions: 72396
Number of sequences better than 1.0e-020: 52
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 10783529000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)