TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2486118.2.1
(635 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR690019.1|DR690019 EST1080105 Normalized pine embryo li... 255 2e-067
gb|DT631440.1|DT631440 EST1146371 Normalized pine embryo li... 246 1e-064
gb|DR100267.1|DR100267 STRR1_62_H11.g1_A033 Stem Response R... 237 8e-062
gb|CO158223.1|CO158223 FLD1_5_A09.g1_A029 Root flooded Pinu... 184 4e-046
gb|DR160218.1|DR160218 RTFE1_4_D09.g1_A029 Roots minus iron... 170 1e-041
gb|BF010489.1|BF010489 NXCI_084_F04_F NXCI (Nsf Xylem Compr... 164 5e-040
gb|CR394273.1|CR394273 CR394273 RN Pinus pinaster cDNA clon... 157 6e-038
gb|BX251307.1|BX251307 BX251307 Pinus pinaster differenciat... 152 2e-036
gb|CX647876.1|CX647876 COLD1_25_C03.b1_A029 Root cold Pinus... 152 2e-036
gb|DR017425.1|DR017425 STRS1_16_E10.b1_A034 Shoot tip pitch... 152 2e-036
gb|DR089385.1|DR089385 RTAL1_8_G12.b1_A029 Roots plus added... 152 2e-036
gb|DR689610.1|DR689610 EST1079696 Normalized pine embryo li... 152 2e-036
gb|DT635390.1|DT635390 EST1150321 Normalized pine embryo li... 152 2e-036
gb|DR684943.1|DR684943 EST1075020 Normalized pine embryo li... 151 3e-036
gb|DR687054.1|DR687054 EST1077132 Normalized pine embryo li... 151 3e-036
gb|DR692054.1|DR692054 EST1082141 Normalized pine embryo li... 151 3e-036
gb|DT632612.1|DT632612 EST1147543 Normalized pine embryo li... 151 3e-036
gb|DT633819.1|DT633819 EST1148750 Normalized pine embryo li... 151 3e-036
gb|BV079716.1| Pp_CesA4 Pinus pinaster megagametophytes Pin... 151 5e-036
gb|CO369885.1|CO369885 RTK1_55_A04.b1_A029 Roots minus pota... 150 7e-036
gb|DR683559.1|DR683559 EST1073635 Normalized pine embryo li... 150 9e-036
gb|CF478733.1|CF478733 RTWW3_16_G10.g1_A022 Well-watered lo... 149 2e-035
gb|CV031645.1|CV031645 RTNACL1_2_G07.g1_A029 Roots plus add... 149 2e-035
gb|DR096386.1|DR096386 STRR1_27_D08.g1_A033 Stem Response R... 149 2e-035
gb|AY262821.1| Pinus radiata cellulose synthase (CesA2) mRN... 149 2e-035
gb|BF186257.1|BF186257 NXCI_135_B10_F NXCI (Nsf Xylem Compr... 148 4e-035
gb|DR163320.1|DR163320 RTFE1_42_F04.b1_A029 Roots minus iro... 147 8e-035
gb|AY262820.1| Pinus radiata cellulose synthase (CesA10) mR... 146 2e-034
dbj|BD236020.1| Materials and method for modification of pl... 145 2e-034
gb|AY639654.1| Pinus radiata cellulose synthase catalytic s... 145 2e-034
gb|AH014290.1|SEG_AY764673S Pinus taeda isolate 11 cellulos... 145 2e-034
gb|AY764674.1|AY764673S2 Pinus taeda isolate 11 cellulose s... 145 2e-034
gb|AH014291.1|SEG_AY764675S Pinus taeda isolate 16 cellulos... 145 2e-034
gb|AY764676.1|AY764675S2 Pinus taeda isolate 16 cellulose s... 145 2e-034
gb|AH014292.1|SEG_AY764677S Pinus taeda isolate 25 cellulos... 145 2e-034
gb|AY764678.1|AY764677S2 Pinus taeda isolate 25 cellulose s... 145 2e-034
gb|AH014293.1|SEG_AY764679S Pinus taeda isolate 7 cellulose... 145 2e-034
gb|AY764680.1|AY764679S2 Pinus taeda isolate 7 cellulose sy... 145 2e-034
gb|AH014294.1|SEG_AY764681S Pinus taeda isolate 6 cellulose... 145 2e-034
gb|AY764682.1|AY764681S2 Pinus taeda isolate 6 cellulose sy... 145 2e-034
gb|AH014295.1|SEG_AY764683S Pinus taeda isolate 4 cellulose... 145 2e-034
gb|AY764684.1|AY764683S2 Pinus taeda isolate 4 cellulose sy... 145 2e-034
gb|AH014296.1|SEG_AY764685S Pinus taeda isolate 26 cellulos... 145 2e-034
gb|AY764686.1|AY764685S2 Pinus taeda isolate 26 cellulose s... 145 2e-034
gb|AH014297.1|SEG_AY764687S Pinus taeda isolate 9 cellulose... 145 2e-034
gb|AY764688.1|AY764687S2 Pinus taeda isolate 9 cellulose sy... 145 2e-034
gb|AH014298.1|SEG_AY764689S Pinus taeda isolate 23 cellulos... 145 2e-034
gb|AY764690.1|AY764689S2 Pinus taeda isolate 23 cellulose s... 145 2e-034
gb|AH014299.1|SEG_AY764691S Pinus taeda isolate 13 cellulos... 145 2e-034
gb|AY764692.1|AY764691S2 Pinus taeda isolate 13 cellulose s... 145 2e-034
gb|AH014300.1|SEG_AY764693S Pinus taeda isolate 30 cellulos... 145 2e-034
gb|AY764694.1|AY764693S2 Pinus taeda isolate 30 cellulose s... 145 2e-034
gb|AH014301.1|SEG_AY764695S Pinus taeda isolate 22 cellulos... 145 2e-034
gb|AY764696.1|AY764695S2 Pinus taeda isolate 22 cellulose s... 145 2e-034
gb|AH014302.1|SEG_AY764697S Pinus taeda isolate 32 cellulos... 145 2e-034
gb|AY764698.1|AY764697S2 Pinus taeda isolate 32 cellulose s... 145 2e-034
gb|AH014303.1|SEG_AY764699S Pinus taeda isolate 18 cellulos... 145 2e-034
gb|AY764700.1|AY764699S2 Pinus taeda isolate 18 cellulose s... 145 2e-034
gb|AH014304.1|SEG_AY764701S Pinus taeda isolate 10 cellulos... 145 2e-034
gb|AY764702.1|AY764701S2 Pinus taeda isolate 10 cellulose s... 145 2e-034
gb|AH014305.1|SEG_AY764703S Pinus taeda isolate 14 cellulos... 145 2e-034
gb|AY764704.1|AY764703S2 Pinus taeda isolate 14 cellulose s... 145 2e-034
gb|AH014306.1|SEG_AY764705S Pinus taeda isolate 21 cellulos... 145 2e-034
gb|AY764706.1|AY764705S2 Pinus taeda isolate 21 cellulose s... 145 2e-034
gb|AH014307.1|SEG_AY764707S Pinus taeda isolate 31 cellulos... 145 2e-034
gb|AY764708.1|AY764707S2 Pinus taeda isolate 31 cellulose s... 145 2e-034
gb|AH014308.1|SEG_AY764709S Pinus taeda isolate 5 cellulose... 145 2e-034
gb|AY764710.1|AY764709S2 Pinus taeda isolate 5 cellulose sy... 145 2e-034
gb|AH014309.1|SEG_AY764711S Pinus taeda isolate 2 cellulose... 145 2e-034
gb|AY764712.1|AY764711S2 Pinus taeda isolate 2 cellulose sy... 145 2e-034
gb|AH014310.1|SEG_AY764713S Pinus taeda isolate 3 cellulose... 145 2e-034
gb|AY764714.1|AY764713S2 Pinus taeda isolate 3 cellulose sy... 145 2e-034
gb|AH014311.1|SEG_AY764715S Pinus taeda isolate 19 cellulos... 145 2e-034
gb|AY764716.1|AY764715S2 Pinus taeda isolate 19 cellulose s... 145 2e-034
gb|AH014312.1|SEG_AY764717S Pinus taeda isolate 28 cellulos... 145 2e-034
gb|AY764718.1|AY764717S2 Pinus taeda isolate 28 cellulose s... 145 2e-034
gb|AH014313.1|SEG_AY764719S Pinus taeda isolate 17 cellulos... 145 2e-034
gb|AY764720.1|AY764719S2 Pinus taeda isolate 17 cellulose s... 145 2e-034
gb|AH014314.1|SEG_AY764721S Pinus taeda isolate 8 cellulose... 145 2e-034
gb|AY764722.1|AY764721S2 Pinus taeda isolate 8 cellulose sy... 145 2e-034
gb|AH014315.1|SEG_AY764723S Pinus taeda isolate 15 cellulos... 145 2e-034
gb|AY764724.1|AY764723S2 Pinus taeda isolate 15 cellulose s... 145 2e-034
gb|AH014316.1|SEG_AY764725S Pinus taeda isolate 1 cellulose... 145 2e-034
gb|AY764726.1|AY764725S2 Pinus taeda isolate 1 cellulose sy... 145 2e-034
gb|AH014317.1|SEG_AY764727S Pinus taeda isolate 29 cellulos... 145 2e-034
gb|AY764728.1|AY764727S2 Pinus taeda isolate 29 cellulose s... 145 2e-034
gb|AH014318.1|SEG_AY764729S Pinus taeda isolate 20 cellulos... 145 2e-034
gb|AY764730.1|AY764729S2 Pinus taeda isolate 20 cellulose s... 145 2e-034
gb|AH014319.1|SEG_AY764731S Pinus taeda isolate 27 cellulos... 145 2e-034
gb|AY764732.1|AY764731S2 Pinus taeda isolate 27 cellulose s... 145 2e-034
gb|AH014320.1|SEG_AY764733S Pinus taeda isolate 12 cellulos... 145 2e-034
gb|AY764734.1|AY764733S2 Pinus taeda isolate 12 cellulose s... 145 2e-034
gb|AH014321.1|SEG_AY764735S Pinus taeda isolate 24 cellulos... 145 2e-034
gb|AY764736.1|AY764735S2 Pinus taeda isolate 24 cellulose s... 145 2e-034
gb|AY789652.1| Pinus taeda cellulose synthase catalytic sub... 145 2e-034
gb|DR096307.1|DR096307 STRR1_27_D08.b1_A033 Stem Response R... 145 3e-034
gb|BX254022.1|BX254022 BX254022 Pinus pinaster differenciat... 144 4e-034
gb|BX254483.1|BX254483 BX254483 Pinus pinaster differenciat... 144 4e-034
gb|BX254948.1|BX254948 BX254948 Pinus pinaster differenciat... 144 4e-034
gb|CO168623.1|CO168623 NDL1_1_A02.g1_A029 Needles control P... 144 4e-034
gb|AY789650.1| Pinus taeda cellulose synthase catalytic sub... 144 4e-034
gb|DR682518.1|DR682518 EST1072593 Normalized pine embryo li... 144 6e-034
gb|BG039685.1|BG039685 NXSI_102_H08_F NXSI (Nsf Xylem Side ... 143 1e-033
gb|BG040499.1|BG040499 NXSI_108_H05_F NXSI (Nsf Xylem Side ... 143 1e-033
gb|AY262815.1| Pinus radiata cellulose synthase (CesA3) mRN... 143 1e-033
gb|BX784298.1|BX784298 BX784298 Pinus pinaster differenciat... 142 3e-033
gb|BX255349.1|BX255349 BX255349 Pinus pinaster differenciat... 141 4e-033
gb|BX252761.1|BX252761 BX252761 Pinus pinaster differenciat... 140 1e-032
gb|BX254358.1|BX254358 BX254358 Pinus pinaster differenciat... 140 1e-032
gb|CF476470.1|CF476470 RTWW3_1_C10.g1_A022 Well-watered lob... 140 1e-032
gb|CF668221.1|CF668221 RTCNT1_35_D11.b1_A029 Root control P... 140 1e-032
gb|CO369260.1|CO369260 RTK1_46_B01.b1_A029 Roots minus pota... 140 1e-032
gb|DR110744.1|DR110744 RTS1_12_E03.g1_A029 Roots minus sulf... 140 1e-032
gb|AY789651.1| Pinus taeda cellulose synthase catalytic sub... 140 1e-032
gb|AY262814.1| Pinus radiata cellulose synthase (CesA11) mR... 140 1e-032
gb|AY262816.1| Pinus radiata cellulose synthase (CesA5) mRN... 140 1e-032
gb|AY262817.1| Pinus radiata cellulose synthase (CesA6) mRN... 140 1e-032
gb|AY262818.1| Pinus radiata cellulose synthase (CesA7) mRN... 140 1e-032
gb|AY262819.1| Pinus radiata cellulose synthase (CesA8) mRN... 140 1e-032
gb|BF609565.1|BF609565 NXSI_046_C11_F NXSI (Nsf Xylem Side ... 139 1e-032
gb|BG275218.1|BG275218 NXSI_138_C06_F NXSI (Nsf Xylem Side ... 139 2e-032
gb|CR394345.1|CR394345 CR394345 RN Pinus pinaster cDNA clon... 135 4e-032
gb|BG832808.1|BG832808 NXPV_080_C10_F NXPV (Nsf Xylem Plani... 137 7e-032
gb|BM428045.1|BM428045 NXRV_008_A09_F NXRV (Nsf Xylem Root ... 137 7e-032
gb|BE209216.1|BE209216 NXNV_147_D10_F Nsf Xylem Normal wood... 136 1e-031
gb|BQ703105.1|BQ703105 NXSI_136_D09_F NXSI (Nsf Xylem Side ... 133 8e-031
gb|BQ696934.1|BQ696934 NXPV_047_A09_F NXPV (Nsf Xylem Plani... 133 1e-030
gb|BQ698421.1|BQ698421 NXPV_069_F11_F NXPV (Nsf Xylem Plani... 130 1e-029
gb|BX249614.1|BX249614 BX249614 Pinus pinaster differenciat... 128 3e-029
gb|BG040950.1|BG040950 NXSI_117_A06_F NXSI (Nsf Xylem Side ... 125 3e-028
gb|DR110657.1|DR110657 RTS1_12_E03.b1_A029 Roots minus sulf... 125 3e-028
gb|BQ702475.1|BQ702475 NXSI_129_A10_F NXSI (Nsf Xylem Side ... 125 3e-028
gb|AW042872.1|AW042872 ST26D09 Pine TriplEx shoot tip libra... 124 5e-028
gb|AW064806.1|AW064806 ST36A06 Pine TriplEx shoot tip libra... 123 9e-028
gb|BG832804.1|BG832804 NXPV_080_B12_F NXPV (Nsf Xylem Plani... 118 4e-026
gb|BF610213.1|BF610213 NXSI_056_B10_F NXSI (Nsf Xylem Side ... 116 2e-025
gb|DR118030.1|DR118030 RTMG1_10_E11.g1_A029 Roots minus mag... 114 5e-025
gb|BF609149.1|BF609149 NXSI_040_H08_F NXSI (Nsf Xylem Side ... 101 6e-025
gb|BQ695648.1|BQ695648 NXPV_030_H04_F NXPV (Nsf Xylem Plani... 113 1e-024
gb|BQ697774.1|BQ697774 NXPV_052_F10_F NXPV (Nsf Xylem Plani... 113 1e-024
gb|BG039408.1|BG039408 NXSI_098_F10_F NXSI (Nsf Xylem Side ... 111 5e-024
gb|CF666027.1|CF666027 RTCNT1_20_E07.b1_A029 Root control P... 111 5e-024
gb|DR017506.1|DR017506 STRS1_16_E10.g1_A034 Shoot tip pitch... 110 9e-024
gb|DR060720.1|DR060720 RTNIT1_29_C08.g1_A029 Roots minus ni... 109 2e-023
gb|DR746030.1|DR746030 RTCU1_34_F01.b1_A029 Roots plus adde... 105 2e-022
gb|BE209203.1|BE209203 NXNV_147_C08_F Nsf Xylem Normal wood... 105 4e-022
gb|AW698152.1|AW698152 NXNV_073_G04_F Nsf Xylem Normal wood... 100 1e-020
>gb|DR690019.1|DR690019 EST1080105 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACQ16 3' end, mRNA sequence
Length = 846
Score = 255 bits (551), Expect = 2e-067
Identities = 102/120 (85%), Positives = 110/120 (91%)
Frame = +2 / +2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+D+DD F DLYIVKWTSLMIPPI IMMVNLI IAVGFSR IYSEIPQWSKL+GGVFFS
Sbjct: 482 GGEDIDDMFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRAIYSEIPQWSKLIGGVFFS 661
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTFP* 361
FWVLAHLYPFAKGLMGRRG+TPTIVFVW+GLL+ITISLLWVAINPP+ + IGG F FP*
Sbjct: 662 FWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAITISLLWVAINPPAGSSGIGGGFQFP* 841
Score = 160 bits (344), Expect = 8e-039
Identities = 73/120 (60%), Positives = 85/120 (70%)
Frame = -3 / -1
Query: 360 HGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQK 181
+GN PPI GG +ATH S+MV+ RRP TKT+VGV PL PI+PLANG RCASTQK
Sbjct: 840 YGN*KPPPIPELPAGGFIATHRSDMVIARRPDHTKTIVGVFPLLPIKPLANG*RCASTQK 661
Query: 180 LKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
LKKTPP SLLH GISL*+ NPTA+ +R TI+I +GGII +VH TM R SPP
Sbjct: 660 LKKTPPMSLLH*GISL*IALENPTAIAMRLTIIIVIGGIIREVHFTM*RSANISSISSPP 481
>gb|DT631440.1|DT631440 EST1146371 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF879 3' end, mRNA sequence
Length = 880
Score = 246 bits (532), Expect = 1e-064
Identities = 99/118 (83%), Positives = 108/118 (91%)
Frame = +2 / +2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+D+DD F DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYSEIPQWSKL+GGVFFS
Sbjct: 524 GGEDIDDMFADLYIVKWTSLMIPPITIMMVNLIVIAVGFSRTIYSEIPQWSKLIGGVFFS 703
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQNQQIGGSFTF 355
FWVLAHLYPFAKGLMGRRG+TPTIVFVW+GLL+ITISLLWVAINPP+ + G+F F
Sbjct: 704 FWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAITISLLWVAINPPAVVHESVGAFNF 877
Score = 155 bits (333), Expect = 3e-037
Identities = 69/106 (65%), Positives = 80/106 (75%)
Frame = -3 / -2
Query: 318 GGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGI 139
GG +ATH S+MV+ RRP TKT+VGV PL PI+PLANG RCASTQKLKKTPP SLLH GI
Sbjct: 840 GGFIATHRSDMVIARRPDHTKTIVGVFPLLPIKPLANG*RCASTQKLKKTPPMSLLH*GI 661
Query: 138 SL*MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
SL*+V NPTA+ +R TI+I +GGII +VH TM R SPP
Sbjct: 660 SL*IVLENPTAITMRLTIIIVIGGIIREVHFTM*RSANISSISSPP 523
>gb|DR100267.1|DR100267 STRR1_62_H11.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_62_H11_A033 5', mRNA sequence
Length = 549
Score = 237 bits (511), Expect = 8e-062
Identities = 94/104 (90%), Positives = 100/104 (96%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD+DDEF DLYIVKWTSLMIPPI IMM+NLIGIAVGFSRTIYS+ P+WSKLLGGVFFS
Sbjct: 237 GGDDIDDEFADLYIVKWTSLMIPPITIMMINLIGIAVGFSRTIYSQNPEWSKLLGGVFFS 416
Query: 182 FWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAIN 313
FWVLAHLYPFAKGLMGR GRTPTIVFVW+GLL+ITISLLWVAIN
Sbjct: 417 FWVLAHLYPFAKGLMGRMGRTPTIVFVWSGLLAITISLLWVAIN 548
Score = 146 bits (313), Expect = 2e-034
Identities = 64/103 (62%), Positives = 77/103 (74%)
Frame = -3 / -3
Query: 309 MATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQKLKKTPPSSLLHCGISL* 130
+ATHSSE+V+ RRP T TMVGV P+ P+ PLANG R A+TQKLKKTPPSSLLH G L*
Sbjct: 544 IATHSSEIVIARRPDHTNTMVGVLPILPMSPLANG*R*ANTQKLKKTPPSSLLHSGF*L* 365
Query: 129 MVRLNPTAMPIRFTIMITMGGIISDVHLTMYRXXXXXXXXSPP 1
+V NPTA+P+R IM+ +GGIIS+VH T+YR SPP
Sbjct: 364 IVLENPTAIPMRLIIMMVIGGIISEVHFTIYRSANSSSISSPP 236
>gb|CO158223.1|CO158223 FLD1_5_A09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_5_A09_A029 5', mRNA sequence
Length = 852
Score = 184 bits (397), Expect = 4e-046
Identities = 75/85 (88%), Positives = 79/85 (92%)
Frame = +2 / +1
Query: 107 AVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSIT 286
AVGFSRTIYSE P+WSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW+GLL+IT
Sbjct: 1 AVGFSRTIYSENPEWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAIT 180
Query: 287 ISLLWVAINPPSQNQQIGGSFTFP* 361
ISLLWVAINPP + IGGSF FP*
Sbjct: 181 ISLLWVAINPPQGSTGIGGSFQFP* 255
Score = 117 bits (250), Expect = 8e-026
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = -3 / -2
Query: 360 HGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQK 181
+GN PPI GG +ATHSSE+V+ RRP T TMVGV PL P+ PLANG R A+TQK
Sbjct: 254 YGN*KLPPIPVLPCGGFIATHSSEIVIARRPDHTNTMVGVLPLLPMSPLANG*R*ANTQK 75
Query: 180 LKKTPPSSLLHCGISL*MVRLNPT 109
LKKTPPSSLLH G SL*+V NPT
Sbjct: 74 LKKTPPSSLLHSGFSL*IVLENPT 3
>gb|DR160218.1|DR160218 RTFE1_4_D09.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_4_D09_A029 5', mRNA sequence
Length = 756
Score = 170 bits (365), Expect = 1e-041
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = +2 / +2
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GGDD+DDEF DLYIVKWTSLMIPPI IMM+NLIGIAVGFSRTIYSE P+WSKLLGGVFFS
Sbjct: 533 GGDDIDDEFADLYIVKWTSLMIPPITIMMINLIGIAVGFSRTIYSENPEWSKLLGGVFFS 712
Query: 182 FWVLAHLYPFAKG 220
FWVLAHLYPFA+G
Sbjct: 713 FWVLAHLYPFARG 751
Score = 107 bits (229), Expect = 6e-023
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3 / -1
Query: 219 PLANGYRCASTQKLKKTPPSSLLHCGISL*MVRLNPTAMPIRFTIMITMGGIISDVHLTM 40
PLANG R A+TQKLKKTPPSSLLH G SL*+V NPTA+P+R IM+ +GGIIS+VH T+
Sbjct: 750 PLANG*R*ANTQKLKKTPPSSLLHSGFSL*IVLENPTAIPMRLIIMMVIGGIISEVHFTI 571
Query: 39 YRXXXXXXXXSPP 1
YR SPP
Sbjct: 570 YRSANSSSISSPP 532
>gb|BF010489.1|BF010489 NXCI_084_F04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_084_F04 5' similar to Arabidopsis
thaliana sequence At3g03050 putative cellulose synthase
catalytic subunit see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 391
Score = 164 bits (353), Expect = 5e-040
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +2 / +2
Query: 137 EIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
EIPQWSKL+GGVFFSFWVLAHLYPFAKGLMGRRG+TPTIVFVW+GLL+ITISLLWVAINP
Sbjct: 2 EIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAITISLLWVAINP 181
Query: 317 PSQNQQIGGSFTFP*KL 367
P+ + IGG F FP* L
Sbjct: 182 PAGSSGIGGGFQFP*GL 232
Score = 115 bits (245), Expect = 4e-025
Identities = 51/75 (68%), Positives = 57/75 (76%)
Frame = -3 / -2
Query: 360 HGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQK 181
+GN PPI GG +ATH S+MV+ RRP TKT+VGV PL PI+PLANG RCASTQK
Sbjct: 225 YGN*KPPPIPELPAGGFIATHRSDMVIARRPDHTKTIVGVFPLLPIKPLANG*RCASTQK 46
Query: 180 LKKTPPSSLLHCGIS 136
LKKTPP SLLH GIS
Sbjct: 45 LKKTPPMSLLH*GIS 1
>gb|CR394273.1|CR394273 CR394273 RN Pinus pinaster cDNA clone RN76A07, mRNA sequence
Length = 298
Score = 157 bits (338), Expect = 6e-038
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +2 / +1
Query: 146 QWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINPPSQ 325
+WSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW+GLL+ITISLLWVAINPP
Sbjct: 10 RWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINPPQG 189
Query: 326 NQQIGGSFTFP* 361
+ IGGSF FP*
Sbjct: 190 STGIGGSFQFP* 225
Score = 102 bits (218), Expect = 2e-021
Identities = 47/71 (66%), Positives = 53/71 (74%)
Frame = -3 / -3
Query: 360 HGNVNDPPICWFWDGGLMATHSSEMVMERRPAQTKTMVGVRPLRPIRPLANGYRCASTQK 181
+GN PPI GG +ATHSSE+V+ RRP T TMVGV PL P+ PLANG R A+TQK
Sbjct: 224 YGN*KLPPIPVLPCGGFIATHSSEIVIARRPDHTNTMVGVLPLLPMSPLANG*R*ANTQK 45
Query: 180 LKKTPPSSLLH 148
LKKTPPSSLLH
Sbjct: 44 LKKTPPSSLLH 12
>gb|BX251307.1|BX251307 BX251307 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP048A02, mRNA sequence
Length = 671
Score = 152 bits (327), Expect = 2e-036
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV
Sbjct: 119 DEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWV 298
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 299 IVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 424
>gb|CX647876.1|CX647876 COLD1_25_C03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_25_C03_A029 3', mRNA sequence
Length = 847
Score = 152 bits (327), Expect = 2e-036
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / +3
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV
Sbjct: 54 DEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWV 233
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 234 IVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 359
>gb|DR017425.1|DR017425 STRS1_16_E10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_16_E10_A034 3', mRNA sequence
Length = 852
Score = 152 bits (327), Expect = 2e-036
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV
Sbjct: 251 DEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWV 430
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 431 IVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 556
>gb|DR089385.1|DR089385 RTAL1_8_G12.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_8_G12_A029 3', mRNA sequence
Length = 751
Score = 152 bits (327), Expect = 2e-036
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV
Sbjct: 44 DEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWV 223
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 224 IVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 349
>gb|DR689610.1|DR689610 EST1079696 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACK80 3' end, mRNA sequence
Length = 707
Score = 152 bits (327), Expect = 2e-036
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / +1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV
Sbjct: 175 DEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWV 354
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 355 IVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 480
>gb|DT635390.1|DT635390 EST1150321 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGG33 3' end, mRNA sequence
Length = 761
Score = 152 bits (327), Expect = 2e-036
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +2 / +1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV
Sbjct: 175 DEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWV 354
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 355 IVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 480
>gb|DR684943.1|DR684943 EST1075020 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAY38 3' end, mRNA sequence
Length = 859
Score = 151 bits (325), Expect = 3e-036
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP +++VNLIG+ G S I + W L G +FF+FWV+
Sbjct: 265 DDDFSELYAFKWTTLLIPPTTLLIVNLIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIV 444
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 445 HLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRINP 564
>gb|DR687054.1|DR687054 EST1077132 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABM78 3' end, mRNA sequence
Length = 740
Score = 151 bits (325), Expect = 3e-036
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP +++VNLIG+ G S I + W L G +FF+FWV+
Sbjct: 360 DDDFSELYAFKWTTLLIPPTTLLIVNLIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIV 539
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 540 HLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRINP 659
>gb|DR692054.1|DR692054 EST1082141 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADH43 3' end, mRNA sequence
Length = 770
Score = 151 bits (325), Expect = 3e-036
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP +++VNLIG+ G S I + W L G +FF+FWV+
Sbjct: 20 DDDFSELYAFKWTTLLIPPTTLLIVNLIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIV 199
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 200 HLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRINP 319
>gb|DT632612.1|DT632612 EST1147543 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFL85 3' end, mRNA sequence
Length = 771
Score = 151 bits (325), Expect = 3e-036
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP +++VNLIG+ G S I + W L G +FF+FWV+
Sbjct: 273 DDDFSELYAFKWTTLLIPPTTLLIVNLIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIV 452
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 453 HLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRINP 572
>gb|DT633819.1|DT633819 EST1148750 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFZ11 3' end, mRNA sequence
Length = 688
Score = 151 bits (325), Expect = 3e-036
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
DD+F +LY KWT+L+IPP +++VNLIG+ G S I + W L G +FF+FWV+
Sbjct: 368 DDDFSELYAFKWTTLLIPPTTLLIVNLIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIV 547
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV INP
Sbjct: 548 HLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRINP 667
>gb|BV079716.1| Pp_CesA4 Pinus pinaster megagametophytes Pinus pinaster STS
genomic, sequence tagged site
Length = 489
Score = 151 bits (324), Expect = 5e-036
Identities = 55/102 (53%), Positives = 75/102 (73%)
Frame = +2 / -1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++N++G+ G S+ I S W LLG +FF+FWV
Sbjct: 471 DEDGDFAELYLFKWTALLIPPTTLLVINIVGVVAGISQAISSGYAAWGPLLGKLFFAFWV 292
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 291 IVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 166
>gb|CO369885.1|CO369885 RTK1_55_A04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_A04_A029 3', mRNA sequence
Length = 768
Score = 150 bits (323), Expect = 7e-036
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV+
Sbjct: 2 DGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWVIV 181
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 182 HLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 301
>gb|DR683559.1|DR683559 EST1073635 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAI64 3' end, mRNA sequence
Length = 717
Score = 150 bits (322), Expect = 9e-036
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +2 / +3
Query: 2 GGDDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFS 181
GG+D+DD F DLYIVKWTSLMIPPI IMMVNLI IAVGFSRTIYSEIPQWSKL+GGVFFS
Sbjct: 516 GGEDIDDMFADLYIVKWTSLMIPPITIMMVNLIVIAVGFSRTIYSEIPQWSKLIGGVFFS 695
Query: 182 FWVLAHL 202
FWVLAHL
Sbjct: 696 FWVLAHL 716
>gb|CF478733.1|CF478733 RTWW3_16_G10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_G10_A022 5', mRNA sequence
Length = 695
Score = 149 bits (320), Expect = 2e-035
Identities = 54/102 (52%), Positives = 74/102 (72%)
Frame = +2 / +3
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++N++G+ G S+ I S W L G +FF+FWV
Sbjct: 72 DEDGDFAELYLFKWTALLIPPTTLLVINIVGVVAGISQAISSGYAAWGPLFGKLFFAFWV 251
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 252 IVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 377
>gb|CV031645.1|CV031645 RTNACL1_2_G07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_G07_A029 5', mRNA sequence
Length = 796
Score = 149 bits (320), Expect = 2e-035
Identities = 54/102 (52%), Positives = 74/102 (72%)
Frame = +2 / +2
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++N++G+ G S+ I S W L G +FF+FWV
Sbjct: 344 DEDGDFAELYLFKWTALLIPPTTLLVINIVGVVAGISQAISSGYAAWGPLFGKLFFAFWV 523
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 524 IVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 649
>gb|DR096386.1|DR096386 STRR1_27_D08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_D08_A033 5', mRNA sequence
Length = 744
Score = 149 bits (320), Expect = 2e-035
Identities = 54/102 (52%), Positives = 74/102 (72%)
Frame = +2 / -1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++N++G+ G S+ I S W L G +FF+FWV
Sbjct: 702 DEDGDFAELYLFKWTALLIPPTTLLVINIVGVVAGISQAISSGYAAWGPLFGKLFFAFWV 523
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 522 IVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 397
>gb|AY262821.1| Pinus radiata cellulose synthase (CesA2) mRNA, partial cds
Length = 3603
Score = 149 bits (320), Expect = 2e-035
Identities = 54/102 (52%), Positives = 74/102 (72%)
Frame = +2 / +1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D +F +LY+ KWT+L+IPP ++++N++G+ G S+ I S W L G +FF+FWV
Sbjct: 2842 DEDGDFAELYLFKWTALLIPPTTLLVINIVGVVAGISQAISSGYAAWGPLFGKLFFAFWV 3021
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 3022 IVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 3147
>gb|BF186257.1|BF186257 NXCI_135_B10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_135_B10 5' similar to Arabidopsis
thaliana sequence At5g05170 cellulose synthase catalytic
subunit (Ath-B) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 371
Score = 148 bits (317), Expect = 4e-035
Identities = 56/98 (57%), Positives = 70/98 (71%)
Frame = +2 / +1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D D EF +LY+ KWTSL+IPP +++VNL+G+ G S+ I S W L G +FFS WV
Sbjct: 52 DEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWV 231
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWV 304
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV
Sbjct: 232 IVHLYPFLKGLMGRQNRTPTIVIVWSILLAXIFSLLWV 345
>gb|DR163320.1|DR163320 RTFE1_42_F04.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_42_F04_A029 3', mRNA sequence
Length = 835
Score = 147 bits (315), Expect = 8e-035
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / -3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY+ KWT+L+IPP ++++N+IG+ G S I + W L G +FF+FWV+
Sbjct: 788 DGEFSELYLFKWTNLLIPPTTLLVINIIGVVAGVSDAINNGYASWGPLFGKMFFAFWVIV 609
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMG++ RTPTIV VW+ LL+ SL+WV INP
Sbjct: 608 HLYPFLKGLMGKQNRTPTIVIVWSVLLASLFSLIWVRINP 489
>gb|AY262820.1| Pinus radiata cellulose synthase (CesA10) mRNA, complete cds
Length = 4428
Score = 146 bits (313), Expect = 2e-034
Identities = 53/102 (51%), Positives = 73/102 (71%)
Frame = +2 / +1
Query: 11 DVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWV 190
D +F +LYI+KWT+L+IPP ++++N++G+ G S I + W L G +FF+FWV
Sbjct: 3580 DEGGDFAELYIIKWTALLIPPTTLLIINIVGVVAGISYAISTGYRSWGPLFGKLFFAFWV 3759
Query: 191 LAHLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
+ HLYPF KGLMGR+ RTPTIV VW+ LL+ SLLWV I+P
Sbjct: 3760 IVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDP 3885
>dbj|BD236020.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 3851
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +3
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 3054 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 3233
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 3234 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 3353
>gb|AY639654.1| Pinus radiata cellulose synthase catalytic subunit (CesA1) mRNA,
complete cds
Length = 3911
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 3070 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 3249
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 3250 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 3369
>gb|AH014290.1|SEG_AY764673S Pinus taeda isolate 11 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764674.1|AY764673S2 Pinus taeda isolate 11 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014291.1|SEG_AY764675S Pinus taeda isolate 16 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764676.1|AY764675S2 Pinus taeda isolate 16 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014292.1|SEG_AY764677S Pinus taeda isolate 25 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764678.1|AY764677S2 Pinus taeda isolate 25 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014293.1|SEG_AY764679S Pinus taeda isolate 7 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764680.1|AY764679S2 Pinus taeda isolate 7 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014294.1|SEG_AY764681S Pinus taeda isolate 6 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764682.1|AY764681S2 Pinus taeda isolate 6 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014295.1|SEG_AY764683S Pinus taeda isolate 4 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764684.1|AY764683S2 Pinus taeda isolate 4 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014296.1|SEG_AY764685S Pinus taeda isolate 26 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764686.1|AY764685S2 Pinus taeda isolate 26 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014297.1|SEG_AY764687S Pinus taeda isolate 9 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764688.1|AY764687S2 Pinus taeda isolate 9 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014298.1|SEG_AY764689S Pinus taeda isolate 23 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764690.1|AY764689S2 Pinus taeda isolate 23 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
>gb|AH014299.1|SEG_AY764691S Pinus taeda isolate 13 cellulose synthase genes, partial cds
Length = 1023
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +2
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 602 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 781
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 782 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 901
>gb|AY764692.1|AY764691S2 Pinus taeda isolate 13 cellulose synthase gene, partial cds
Length = 452
Score = 145 bits (312), Expect = 2e-034
Identities = 53/100 (53%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 17 DDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLA 196
D EF +LY KWT+L+IPP ++++NL+G+ VG + I + W LLG +FF+FWV+
Sbjct: 31 DGEFGELYAFKWTTLLIPPTTLLVINLVGVVVGVADAINNGFQSWGPLLGKLFFAFWVIV 210
Query: 197 HLYPFAKGLMGRRGRTPTIVFVWAGLLSITISLLWVAINP 316
HLYPF KGLMGR+ RTPTIV +W+ LL+ SL WV I+P
Sbjct: 211 HLYPFLKGLMGRQNRTPTIVVIWSILLASVFSLFWVRIDP 330
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 326,109,142
Number of Sequences: 355925
Number of extensions: 4745371
Number of successful extensions: 47978
Number of sequences better than 1.0e-020: 180
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8683771200
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)