TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478065.2.2
(688 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX248947.1|BX248947 BX248947 Pinus pinaster differenciat... 275 2e-073
gb|BX249705.1|BX249705 BX249705 Pinus pinaster differenciat... 275 2e-073
gb|BX252578.1|BX252578 BX252578 Pinus pinaster differenciat... 275 2e-073
gb|BX253886.1|BX253886 BX253886 Pinus pinaster differenciat... 275 2e-073
gb|BX255547.1|BX255547 BX255547 Pinus pinaster differenciat... 275 2e-073
gb|BQ291015.1|BQ291015 NXRV054_E11_F NXRV (Nsf Xylem Root w... 271 3e-072
gb|CX715269.1|CX715269 RTPQ1_33_B11.b1_A032 Roots treated w... 271 3e-072
gb|DR387646.1|DR387646 RTHG1_23_E10.b1_A029 Roots plus adde... 271 3e-072
gb|DR387724.1|DR387724 RTHG1_23_E10.g2_A029 Roots plus adde... 271 3e-072
gb|BX249288.1|BX249288 BX249288 Pinus pinaster differenciat... 270 5e-072
gb|BX667544.1|BX667544 BX667544 RN Pinus pinaster cDNA clon... 270 5e-072
gb|BX250663.1|BX250663 BX250663 Pinus pinaster differenciat... 270 7e-072
gb|BX677322.1|BX677322 BX677322 RN Pinus pinaster cDNA clon... 270 7e-072
gb|DR013608.1|DR013608 HEAT1_20_H04.b1_A029 Root at 37 C fo... 270 7e-072
gb|DR385428.1|DR385428 RTHG1_8_D02.g1_A029 Roots plus added... 270 7e-072
gb|DR386621.1|DR386621 RTHG1_16_H12.b1_A029 Roots plus adde... 270 7e-072
gb|DR386817.1|DR386817 RTHG1_17_D05.g1_A029 Roots plus adde... 270 7e-072
gb|BX676937.1|BX676937 BX676937 RN Pinus pinaster cDNA clon... 269 2e-071
gb|DR013688.1|DR013688 HEAT1_20_H04.g1_A029 Root at 37 C fo... 268 3e-071
gb|DR097417.1|DR097417 STRR1_34_C01.g3_A033 Stem Response R... 268 3e-071
gb|BF777970.1|BF777970 NXSI_079_D10_F NXSI (Nsf Xylem Side ... 268 3e-071
gb|BG039395.1|BG039395 NXSI_098_E10_F NXSI (Nsf Xylem Side ... 268 3e-071
gb|BG275739.1|BG275739 NXSI_145_D02_F NXSI (Nsf Xylem Side ... 268 3e-071
gb|BQ290653.1|BQ290653 NXRV047_H09_F NXRV (Nsf Xylem Root w... 267 7e-071
gb|BG040412.1|BG040412 NXSI_108_A01_F NXSI (Nsf Xylem Side ... 266 1e-070
gb|BQ702743.1|BQ702743 NXSI_132_A12_F NXSI (Nsf Xylem Side ... 266 1e-070
gb|BQ699739.1|BQ699739 NXRV128_C07_F NXRV (Nsf Xylem Root w... 262 2e-069
gb|CX712546.1|CX712546 RTPQ1_3_E03.b2_A032 Roots treated wi... 260 6e-069
gb|AW985283.1|AW985283 NXNV_135_D03_F Nsf Xylem Normal wood... 260 8e-069
gb|BG275297.1|BG275297 NXSI_142_B05_F NXSI (Nsf Xylem Side ... 260 8e-069
gb|CX712625.1|CX712625 RTPQ1_3_E03.g1_A032 Roots treated wi... 259 2e-068
gb|DR384373.1|DR384373 RTHG1_1_G04.g1_A029 Roots plus added... 257 5e-068
gb|BG039741.1|BG039741 NXSI_103_E05_F NXSI (Nsf Xylem Side ... 257 7e-068
gb|AW043150.1|AW043150 ST29H12 Pine TriplEx shoot tip libra... 256 1e-067
gb|DR384292.1|DR384292 RTHG1_1_G04.b1_A029 Roots plus added... 256 1e-067
gb|DR097342.1|DR097342 STRR1_34_C01.b1_A033 Stem Response R... 255 2e-067
gb|BF609742.1|BF609742 NXSI_048_H06_F NXSI (Nsf Xylem Side ... 253 7e-067
gb|BF517570.1|BF517570 NXSI_026_B07_F NXSI (Nsf Xylem Side ... 253 1e-066
gb|BF010697.1|BF010697 NXCI_066_D05_F NXCI (Nsf Xylem Compr... 252 2e-066
gb|BX255612.1|BX255612 BX255612 Pinus pinaster differenciat... 244 4e-064
gb|CR394462.1|CR394462 CR394462 RN Pinus pinaster cDNA clon... 244 5e-064
gb|BF517130.1|BF517130 NXSI_009_G11_F NXSI (Nsf Xylem Side ... 243 1e-063
gb|BE762025.1|BE762025 NXCI_076_B04_F NXCI (Nsf Xylem Compr... 240 9e-063
gb|AW981694.1|AW981694 PC15F02 Pine TriplEx pollen cone lib... 136 2e-062
gb|BX682457.1|BX682457 BX682457 Pinus pinaster differenciat... 236 2e-061
gb|BQ701976.1|BQ701976 NXSI_122_H02_F NXSI (Nsf Xylem Side ... 235 2e-061
gb|DR682025.1|DR682025 EST1072100 Normalized pine embryo li... 224 4e-058
gb|DR682026.1|DR682026 EST1072101 Normalized pine embryo li... 224 4e-058
gb|BQ699273.1|BQ699273 NXRV121_F03_F NXRV (Nsf Xylem Root w... 209 2e-056
gb|AW981749.1|AW981749 PC18C01 Pine TriplEx pollen cone lib... 154 1e-054
gb|AA557107.1|AA557107 949 Loblolly pine N Pinus taeda cDNA... 169 7e-052
gb|BQ634458.1|BQ634458 NXRV069_B09_F NXRV (Nsf Xylem Root w... 188 1e-051
gb|CR392530.1|CR392530 CR392530 RN Pinus pinaster cDNA clon... 202 3e-051
gb|DR094147.1|DR094147 STRR1_12_F02.g1_A033 Stem Response R... 191 4e-048
gb|CR394394.1|CR394394 CR394394 RN Pinus pinaster cDNA clon... 187 7e-047
gb|BE209354.1|BE209354 NXNV_166_G05_F Nsf Xylem Normal wood... 182 2e-045
gb|BM133330.1|BM133330 NXLV_004_A07_F NXLV (Nsf Xylem Late ... 182 2e-045
gb|BX253489.1|BX253489 BX253489 Pinus pinaster differenciat... 182 2e-045
gb|BX681171.1|BX681171 BX681171 RS Pinus pinaster cDNA clon... 127 4e-041
gb|BM492793.1|BM492793 NXRV_031_B05_F NXRV (Nsf Xylem Root ... 163 1e-039
gb|BF609354.1|BF609354 NXSI_045_C11_F NXSI (Nsf Xylem Side ... 159 2e-038
gb|AW290226.1|AW290226 NXNV015D07F Nsf Xylem Normal wood Ve... 151 4e-036
gb|CD026856.1|CD026856 NXNV015D07 Nsf Xylem Normal wood Ver... 151 4e-036
gb|AW064852.1|AW064852 ST36F03 Pine TriplEx shoot tip libra... 134 4e-034
gb|AW754980.1|AW754980 PC09B02 Pine TriplEx pollen cone lib... 130 1e-029
gb|BM428059.1|BM428059 NXRV_008_C04_F NXRV (Nsf Xylem Root ... 125 4e-028
gb|BQ655215.1|BQ655215 NXRV091_E09_F NXRV (Nsf Xylem Root w... 123 1e-027
gb|BQ634511.1|BQ634511 NXRV069_H01_F NXRV (Nsf Xylem Root w... 90 2e-026
gb|DN629401.1|DN629401 EST980217 Subtracted pine embryo lib... 115 4e-025
gb|BE762167.1|BE762167 NXCI_082_G08_F NXCI (Nsf Xylem Compr... 115 4e-025
gb|DT629796.1|DT629796 EST1154208 Subtracted pine embryo li... 112 2e-024
gb|DT630082.1|DT630082 EST1154494 Subtracted pine embryo li... 112 2e-024
gb|DN629125.1|DN629125 EST979941 Subtracted pine embryo lib... 111 7e-024
gb|DN630723.1|DN630723 EST981539 Subtracted pine embryo lib... 111 7e-024
gb|DR386700.1|DR386700 RTHG1_16_H12.g1_A029 Roots plus adde... 110 1e-023
gb|BX784111.1|BX784111 BX784111 Pinus pinaster differenciat... 108 3e-023
gb|CD023432.1|CD023432 NXPV_126_C08_F NXPV (Nsf Xylem Plani... 102 2e-021
gb|BI644005.1|BI644005 NXPV_138_D12_F NXPV (Nsf Xylem Plani... 101 6e-021
>gb|BX248947.1|BX248947 BX248947 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP003A06 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 514
Score = 275 bits (595), Expect = 2e-073
Identities = 114/138 (82%), Positives = 125/138 (90%)
Frame = +1 / +3
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 75 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 254
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+
Sbjct: 255 SNKKTRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDIL 434
Query: 484 VTNKLARLRSQEDE*TVS 537
VTNKLA+LRSQEDE* V+
Sbjct: 435 VTNKLAKLRSQEDE*LVT 488
Score = 130 bits (278), Expect(2) = 6e-034
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -1
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 484 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 305
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 304 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 188
Score = 127 bits (273), Expect = 6e-029
Identities = 54/121 (44%), Positives = 83/121 (68%)
Frame = -2 / -3
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
+ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 509 NESTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 330
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 329 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 150
Query: 198 V 196
V
Sbjct: 149 V 147
Score = 114 bits (244), Expect = 6e-025
Identities = 57/121 (47%), Positives = 76/121 (62%)
Frame = +3 / +2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W
Sbjct: 74 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLW 253
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+
Sbjct: 254 V*QEDQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YS 433
Query: 483 G 485
G
Sbjct: 434 G 436
Score = 34.1 bits (68), Expect(2) = 6e-034
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 139 GLLNFLMRFFTIFLFSRGVAIF 74
>gb|BX249705.1|BX249705 BX249705 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP027D03 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 670
Score = 275 bits (595), Expect = 2e-073
Identities = 114/138 (82%), Positives = 125/138 (90%)
Frame = +1 / +3
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 99 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 278
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+
Sbjct: 279 SNKKTRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDIL 458
Query: 484 VTNKLARLRSQEDE*TVS 537
VTNKLA+LRSQEDE* V+
Sbjct: 459 VTNKLAKLRSQEDE*LVT 512
Score = 130 bits (278), Expect(2) = 6e-034
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -1
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 508 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 329
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 328 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 212
Score = 128 bits (274), Expect = 4e-029
Identities = 54/121 (44%), Positives = 84/121 (69%)
Frame = -2 / -3
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
++ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 533 NASTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 354
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 353 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 174
Query: 198 V 196
V
Sbjct: 173 V 171
Score = 114 bits (244), Expect = 6e-025
Identities = 57/121 (47%), Positives = 76/121 (62%)
Frame = +3 / +2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W
Sbjct: 98 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLW 277
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+
Sbjct: 278 V*QEDQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YS 457
Query: 483 G 485
G
Sbjct: 458 G 460
Score = 34.1 bits (68), Expect(2) = 6e-034
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 163 GLLNFLMRFFTIFLFSRGVAIF 98
>gb|BX252578.1|BX252578 BX252578 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP066G01 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 594
Score = 275 bits (595), Expect = 2e-073
Identities = 114/138 (82%), Positives = 125/138 (90%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 31 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 210
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+
Sbjct: 211 SNKKTRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDIL 390
Query: 484 VTNKLARLRSQEDE*TVS 537
VTNKLA+LRSQEDE* V+
Sbjct: 391 VTNKLAKLRSQEDE*LVT 444
Score = 130 bits (278), Expect(2) = 6e-034
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -2
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 440 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 261
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 260 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 144
Score = 127 bits (273), Expect = 6e-029
Identities = 54/121 (44%), Positives = 83/121 (68%)
Frame = -2 / -1
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
+ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 465 NESTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 286
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 285 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 106
Query: 198 V 196
V
Sbjct: 105 V 103
Score = 114 bits (244), Expect = 6e-025
Identities = 57/121 (47%), Positives = 76/121 (62%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W
Sbjct: 30 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLW 209
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+
Sbjct: 210 V*QEDQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YS 389
Query: 483 G 485
G
Sbjct: 390 G 392
Score = 34.1 bits (68), Expect(2) = 6e-034
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 95 GLLNFLMRFFTIFLFSRGVAIF 30
>gb|BX253886.1|BX253886 BX253886 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP090A03 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 485
Score = 275 bits (595), Expect = 2e-073
Identities = 114/138 (82%), Positives = 125/138 (90%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 46 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 225
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+
Sbjct: 226 SNKKTRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDIL 405
Query: 484 VTNKLARLRSQEDE*TVS 537
VTNKLA+LRSQEDE* V+
Sbjct: 406 VTNKLAKLRSQEDE*LVT 459
Score = 130 bits (278), Expect(2) = 6e-034
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -1
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 455 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 276
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 275 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 159
Score = 127 bits (273), Expect = 6e-029
Identities = 54/121 (44%), Positives = 83/121 (68%)
Frame = -2 / -3
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
+ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 480 NESTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 301
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 300 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 121
Query: 198 V 196
V
Sbjct: 120 V 118
Score = 114 bits (244), Expect = 6e-025
Identities = 57/121 (47%), Positives = 76/121 (62%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W
Sbjct: 45 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLW 224
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+
Sbjct: 225 V*QEDQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YS 404
Query: 483 G 485
G
Sbjct: 405 G 407
Score = 34.1 bits (68), Expect(2) = 6e-034
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 110 GLLNFLMRFFTIFLFSRGVAIF 45
>gb|BX255547.1|BX255547 BX255547 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP007A09 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 700
Score = 275 bits (595), Expect = 2e-073
Identities = 114/138 (82%), Positives = 125/138 (90%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 214 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 393
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+
Sbjct: 394 SNKKTRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDIL 573
Query: 484 VTNKLARLRSQEDE*TVS 537
VTNKLA+LRSQEDE* V+
Sbjct: 574 VTNKLAKLRSQEDE*LVT 627
Score = 130 bits (278), Expect(2) = 6e-034
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -3
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 623 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 444
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 443 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 327
Score = 128 bits (274), Expect = 4e-029
Identities = 54/121 (44%), Positives = 84/121 (69%)
Frame = -2 / -2
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
++ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 648 NASTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 469
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 468 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 289
Query: 198 V 196
V
Sbjct: 288 V 286
Score = 114 bits (244), Expect = 6e-025
Identities = 57/121 (47%), Positives = 76/121 (62%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W
Sbjct: 213 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLW 392
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+
Sbjct: 393 V*QEDQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YS 572
Query: 483 G 485
G
Sbjct: 573 G 575
Score = 34.1 bits (68), Expect(2) = 6e-034
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 278 GLLNFLMRFFTIFLFSRGVAIF 213
>gb|BQ291015.1|BQ291015 NXRV054_E11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV054_E11 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 736
Score = 271 bits (587), Expect = 3e-072
Identities = 112/137 (81%), Positives = 124/137 (90%)
Frame = +1 / +1
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 7 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 186
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLD
Sbjct: 187 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLD 366
Query: 478 IVVTNKLARLRSQEDE* 528
IVVTNKLA+LRSQEDE*
Sbjct: 367 IVVTNKLAKLRSQEDE* 417
Score = 130 bits (278), Expect(2) = 1e-033
Identities = 55/107 (51%), Positives = 80/107 (74%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 417 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 238
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 237 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 97
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 377 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 198
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 197 LDP*PILGIRAQPLNFLLTRESIP 126
Score = 111 bits (238), Expect = 4e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 12 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 191
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+
Sbjct: 192 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YR 371
Query: 483 GHQ 491
G Q
Sbjct: 372 GDQ 380
Score = 33.1 bits (66), Expect(2) = 1e-033
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 77 GLLNFFTRFFTIFLFMRGIAIF 12
>gb|CX715269.1|CX715269 RTPQ1_33_B11.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_33_B11_A032 3', mRNA sequence
Length = 807
Score = 271 bits (587), Expect = 3e-072
Identities = 112/137 (81%), Positives = 124/137 (90%)
Frame = +1 / -3
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 766 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 587
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLD
Sbjct: 586 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLD 407
Query: 478 IVVTNKLARLRSQEDE* 528
IVVTNKLA+LRSQEDE*
Sbjct: 406 IVVTNKLAKLRSQEDE* 356
Score = 130 bits (278), Expect(2) = 1e-033
Identities = 55/107 (51%), Positives = 80/107 (74%)
Frame = -2 / +2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 356 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 535
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 536 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 676
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / +3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 396 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 575
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 576 LDP*PILGIRAQPLNFLLTRESIP 647
Score = 111 bits (238), Expect = 4e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / -2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 761 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 582
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+
Sbjct: 581 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YR 402
Query: 483 GHQ 491
G Q
Sbjct: 401 GDQ 393
Score = 33.1 bits (66), Expect(2) = 1e-033
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 696 GLLNFFTRFFTIFLFMRGIAIF 761
>gb|DR387646.1|DR387646 RTHG1_23_E10.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_23_E10_A029 3', mRNA sequence
Length = 831
Score = 271 bits (587), Expect = 3e-072
Identities = 112/137 (81%), Positives = 124/137 (90%)
Frame = +1 / +1
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 31 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 210
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLD
Sbjct: 211 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLD 390
Query: 478 IVVTNKLARLRSQEDE* 528
IVVTNKLA+LRSQEDE*
Sbjct: 391 IVVTNKLAKLRSQEDE* 441
Score = 130 bits (278), Expect(2) = 1e-033
Identities = 55/107 (51%), Positives = 80/107 (74%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 441 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 262
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 261 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 121
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 401 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 222
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 221 LDP*PILGIRAQPLNFLLTRESIP 150
Score = 111 bits (238), Expect = 4e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 36 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 215
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+
Sbjct: 216 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YR 395
Query: 483 GHQ 491
G Q
Sbjct: 396 GDQ 404
Score = 33.1 bits (66), Expect(2) = 1e-033
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 101 GLLNFFTRFFTIFLFMRGIAIF 36
>gb|DR387724.1|DR387724 RTHG1_23_E10.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_23_E10_A029 5', mRNA sequence
Length = 610
Score = 271 bits (587), Expect = 3e-072
Identities = 112/137 (81%), Positives = 124/137 (90%)
Frame = +1 / +1
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 28 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 207
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLD
Sbjct: 208 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLD 387
Query: 478 IVVTNKLARLRSQEDE* 528
IVVTNKLA+LRSQEDE*
Sbjct: 388 IVVTNKLAKLRSQEDE* 438
Score = 130 bits (278), Expect(2) = 1e-033
Identities = 55/107 (51%), Positives = 80/107 (74%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 438 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 259
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 258 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 118
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 398 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 219
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 218 LDP*PILGIRAQPLNFLLTRESIP 147
Score = 111 bits (238), Expect = 4e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 33 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 212
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+
Sbjct: 213 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YR 392
Query: 483 GHQ 491
G Q
Sbjct: 393 GDQ 401
Score = 33.1 bits (66), Expect(2) = 1e-033
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 98 GLLNFFTRFFTIFLFMRGIAIF 33
>gb|BX249288.1|BX249288 BX249288 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP022C07 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 664
Score = 270 bits (585), Expect = 5e-072
Identities = 112/136 (82%), Positives = 123/136 (90%)
Frame = +1 / +1
Query: 130 AVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSD 309
A PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS+
Sbjct: 1 ATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGSN 180
Query: 310 KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVT 489
KKTRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+VT
Sbjct: 181 KKTRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDILVT 360
Query: 490 NKLARLRSQEDE*TVS 537
NKLA+LRSQEDE* V+
Sbjct: 361 NKLAKLRSQEDE*LVT 408
Score = 130 bits (278), Expect(2) = 5e-032
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -3
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 404 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 225
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 224 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 108
Score = 127 bits (273), Expect = 6e-029
Identities = 54/121 (44%), Positives = 83/121 (68%)
Frame = -2 / -2
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
+ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 429 NESTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 250
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 249 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 70
Query: 198 V 196
V
Sbjct: 69 V 67
Score = 109 bits (233), Expect = 2e-023
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = +3 / +3
Query: 135 AAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QE 314
++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W+*QE
Sbjct: 6 SSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLWV*QE 185
Query: 315 DQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
DQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+ G
Sbjct: 186 DQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YSG 356
Score = 27.6 bits (54), Expect(2) = 5e-032
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSG 135
GLLN L RFFTIF + G
Sbjct: 59 GLLNFLMRFFTIFLFSRG 6
>gb|BX667544.1|BX667544 BX667544 RN Pinus pinaster cDNA clone RN09D02, mRNA sequence
Length = 506
Score = 270 bits (585), Expect = 5e-072
Identities = 112/136 (82%), Positives = 123/136 (90%)
Frame = +1 / +1
Query: 130 AVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSD 309
A PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS+
Sbjct: 1 ATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGSN 180
Query: 310 KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVT 489
KKTRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+VT
Sbjct: 181 KKTRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDILVT 360
Query: 490 NKLARLRSQEDE*TVS 537
NKLA+LRSQEDE* V+
Sbjct: 361 NKLAKLRSQEDE*LVT 408
Score = 130 bits (278), Expect(2) = 5e-032
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -1
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 404 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 225
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 224 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 108
Score = 128 bits (274), Expect = 4e-029
Identities = 54/121 (44%), Positives = 84/121 (69%)
Frame = -2 / -3
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
++ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 429 NASTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 250
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 249 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 70
Query: 198 V 196
V
Sbjct: 69 V 67
Score = 109 bits (233), Expect = 2e-023
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = +3 / +3
Query: 135 AAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QE 314
++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W+*QE
Sbjct: 6 SSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLWV*QE 185
Query: 315 DQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
DQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+ G
Sbjct: 186 DQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YSG 356
Score = 27.6 bits (54), Expect(2) = 5e-032
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSG 135
GLLN L RFFTIF + G
Sbjct: 59 GLLNFLMRFFTIFLFSRG 6
>gb|BX250663.1|BX250663 BX250663 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP039G04 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 651
Score = 270 bits (584), Expect = 7e-072
Identities = 111/137 (81%), Positives = 124/137 (90%)
Frame = +1 / +3
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 21 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 200
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLD
Sbjct: 201 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLD 380
Query: 478 IVVTNKLARLRSQEDE* 528
I+VTNKLA+LRSQEDE*
Sbjct: 381 ILVTNKLAKLRSQEDE* 431
Score = 126 bits (270), Expect(2) = 1e-032
Identities = 54/107 (50%), Positives = 79/107 (73%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G ++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 431 LLILLATQLR*LVGHQDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 252
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 251 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 111
Score = 126 bits (269), Expect = 2e-028
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT +SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 391 VTKISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 212
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 211 LDP*PILGIRAQPLNFLLTRESIP 140
Score = 112 bits (240), Expect = 2e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / +2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 26 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 205
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+
Sbjct: 206 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YL 385
Query: 483 GHQ 491
G Q
Sbjct: 386 GDQ 394
Score = 33.1 bits (66), Expect(2) = 1e-032
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 91 GLLNFFTRFFTIFLFMRGIAIF 26
>gb|BX677322.1|BX677322 BX677322 RN Pinus pinaster cDNA clone RN20F04, mRNA sequence
Length = 439
Score = 270 bits (584), Expect = 7e-072
Identities = 111/137 (81%), Positives = 124/137 (90%)
Frame = +1 / +1
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 19 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 198
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLD
Sbjct: 199 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLD 378
Query: 478 IVVTNKLARLRSQEDE* 528
I+VTNKLA+LRSQEDE*
Sbjct: 379 ILVTNKLAKLRSQEDE* 429
Score = 126 bits (270), Expect(2) = 1e-032
Identities = 54/107 (50%), Positives = 79/107 (73%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G ++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 429 LLILLATQLR*LVGHQDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 250
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 249 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 109
Score = 126 bits (269), Expect = 2e-028
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT +SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 389 VTKISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 210
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 209 LDP*PILGIRAQPLNFLLTRESIP 138
Score = 112 bits (240), Expect = 2e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 24 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 203
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+
Sbjct: 204 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YL 383
Query: 483 GHQ 491
G Q
Sbjct: 384 GDQ 392
Score = 33.1 bits (66), Expect(2) = 1e-032
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 89 GLLNFFTRFFTIFLFMRGIAIF 24
>gb|DR013608.1|DR013608 HEAT1_20_H04.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_H04_A029 3', mRNA sequence
Length = 782
Score = 270 bits (584), Expect = 7e-072
Identities = 111/135 (82%), Positives = 123/135 (91%)
Frame = +1 / +3
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 30 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 209
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 210 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 389
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+LRSQEDE*
Sbjct: 390 VTNKLAKLRSQEDE* 434
Score = 127 bits (272), Expect(2) = 3e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 394 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 215
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 214 LDP*PIFGIRAHPLNFLLTRESIP 143
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 434 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 255
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 254 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 102
Score = 111 bits (237), Expect = 5e-024
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +3 / +2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 29 ENGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 208
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 209 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 388
Query: 483 G 485
G
Sbjct: 389 G 391
Score = 31.3 bits (62), Expect(2) = 3e-032
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 94 GRLNFLMRFFTIFLFSRGVAIF 29
>gb|DR385428.1|DR385428 RTHG1_8_D02.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_D02_A029 5', mRNA sequence
Length = 852
Score = 270 bits (584), Expect = 7e-072
Identities = 111/135 (82%), Positives = 123/135 (91%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 67 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 246
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 247 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 426
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+LRSQEDE*
Sbjct: 427 VTNKLAKLRSQEDE* 471
Score = 127 bits (272), Expect(2) = 3e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 431 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 252
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 251 LDP*PIFGIRAHPLNFLLTRESIP 180
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 471 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 292
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 291 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 139
Score = 111 bits (237), Expect = 5e-024
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 66 ENGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 245
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 246 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 425
Query: 483 G 485
G
Sbjct: 426 G 428
Score = 31.3 bits (62), Expect(2) = 3e-032
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 131 GRLNFLMRFFTIFLFSRGVAIF 66
>gb|DR386621.1|DR386621 RTHG1_16_H12.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_16_H12_A029 3', mRNA sequence
Length = 724
Score = 270 bits (584), Expect = 7e-072
Identities = 111/135 (82%), Positives = 123/135 (91%)
Frame = +1 / +3
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 36 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 215
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 216 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 395
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+LRSQEDE*
Sbjct: 396 VTNKLAKLRSQEDE* 440
Score = 127 bits (272), Expect(2) = 3e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 400 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 221
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 220 LDP*PIFGIRAHPLNFLLTRESIP 149
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -3
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 440 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 261
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 260 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 108
Score = 111 bits (237), Expect = 5e-024
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +3 / +2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 35 ENGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 214
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 215 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 394
Query: 483 G 485
G
Sbjct: 395 G 397
Score = 31.3 bits (62), Expect(2) = 3e-032
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 100 GRLNFLMRFFTIFLFSRGVAIF 35
>gb|DR386817.1|DR386817 RTHG1_17_D05.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_D05_A029 5', mRNA sequence
Length = 758
Score = 270 bits (584), Expect = 7e-072
Identities = 111/135 (82%), Positives = 123/135 (91%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 64 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 243
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 244 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 423
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+LRSQEDE*
Sbjct: 424 VTNKLAKLRSQEDE* 468
Score = 127 bits (272), Expect(2) = 3e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 428 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 249
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 248 LDP*PIFGIRAHPLNFLLTRESIP 177
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -3
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 468 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 289
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 288 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 136
Score = 111 bits (237), Expect = 5e-024
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 63 ENGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 242
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 243 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 422
Query: 483 G 485
G
Sbjct: 423 G 425
Score = 31.3 bits (62), Expect(2) = 3e-032
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 128 GRLNFLMRFFTIFLFSRGVAIF 63
>gb|BX676937.1|BX676937 BX676937 RN Pinus pinaster cDNA clone RN14D01, mRNA sequence
Length = 515
Score = 269 bits (581), Expect = 2e-071
Identities = 111/134 (82%), Positives = 122/134 (91%)
Frame = +1 / +3
Query: 136 PLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKK 315
PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS+KK
Sbjct: 6 PLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGSNKK 185
Query: 316 TRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNK 495
TRHYLPN FKKFVVHNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+VTNK
Sbjct: 186 TRHYLPNGFKKFVVHNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDILVTNK 365
Query: 496 LARLRSQEDE*TVS 537
LA+LRSQEDE* V+
Sbjct: 366 LAKLRSQEDE*LVT 407
Score = 130 bits (278), Expect(2) = 5e-032
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / -2
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 403 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 224
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 223 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 107
Score = 128 bits (274), Expect = 4e-029
Identities = 54/121 (44%), Positives = 84/121 (69%)
Frame = -2 / -1
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
++ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 428 NASTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 249
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 248 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 69
Query: 198 V 196
V
Sbjct: 68 V 66
Score = 109 bits (233), Expect = 2e-023
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = +3 / +2
Query: 135 AAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QE 314
++ + ED EEA Q VQ+A RP + Q KLA+A GY ++ GM A +W+W+*QE
Sbjct: 5 SSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTR*EKI*GMCPYAKYWLWV*QE 184
Query: 315 DQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
DQ L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ *+ G
Sbjct: 185 DQTLPAQWL*EVCCPQCS*PRPSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*YSG 355
Score = 27.6 bits (54), Expect(2) = 5e-032
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSG 135
GLLN L RFFTIF + G
Sbjct: 58 GLLNFLMRFFTIFLFSRG 5
>gb|DR013688.1|DR013688 HEAT1_20_H04.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_H04_A029 5', mRNA sequence
Length = 715
Score = 268 bits (580), Expect = 3e-071
Identities = 110/135 (81%), Positives = 123/135 (91%)
Frame = +1 / +3
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
+MA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 3 EMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 182
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 183 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 362
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+LRSQEDE*
Sbjct: 363 VTNKLAKLRSQEDE* 407
Score = 127 bits (272), Expect(2) = 2e-031
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 367 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 188
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 187 LDP*PIFGIRAHPLNFLLTRESIP 116
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -3
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 407 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 228
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 227 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 75
Score = 109 bits (232), Expect = 3e-023
Identities = 56/120 (46%), Positives = 73/120 (60%)
Frame = +3 / +2
Query: 126 DGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL 305
+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W+
Sbjct: 5 NGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLWV 184
Query: 306 *QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ * G
Sbjct: 185 *QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CSG 364
Score = 28.6 bits (56), Expect(2) = 2e-031
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAI 126
G LN L RFFTIF + G AI
Sbjct: 67 GRLNFLMRFFTIFLFSRGVAI 5
>gb|DR097417.1|DR097417 STRR1_34_C01.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_34_C01_A033 5', mRNA sequence
Length = 716
Score = 268 bits (580), Expect = 3e-071
Identities = 110/135 (81%), Positives = 123/135 (91%)
Frame = +1 / +3
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
+MA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 12 EMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 191
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 192 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 371
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+LRSQEDE*
Sbjct: 372 VTNKLAKLRSQEDE* 416
Score = 127 bits (272), Expect(2) = 2e-031
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 376 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 197
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 196 LDP*PIFGIRAHPLNFLLTRESIP 125
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 416 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 237
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 236 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 84
Score = 109 bits (232), Expect = 3e-023
Identities = 56/120 (46%), Positives = 73/120 (60%)
Frame = +3 / +2
Query: 126 DGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL 305
+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W+
Sbjct: 14 NGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLWV 193
Query: 306 *QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ * G
Sbjct: 194 *QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CSG 373
Score = 28.6 bits (56), Expect(2) = 2e-031
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAI 126
G LN L RFFTIF + G AI
Sbjct: 76 GRLNFLMRFFTIFLFSRGVAI 14
>gb|BF777970.1|BF777970 NXSI_079_D10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_079_D10 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 578
Score = 268 bits (579), Expect = 3e-071
Identities = 110/134 (82%), Positives = 122/134 (91%)
Frame = +1 / +2
Query: 127 MAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 306
MA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 23 MATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGS 202
Query: 307 DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 486
+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++V
Sbjct: 203 NKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVLV 382
Query: 487 TNKLARLRSQEDE* 528
TNKLA+LRSQEDE*
Sbjct: 383 TNKLAKLRSQEDE* 424
Score = 127 bits (272), Expect(2) = 1e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 384 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 205
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 204 LDP*PIFGIRAHPLNFLLTRESIP 133
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 424 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 245
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 244 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 92
Score = 110 bits (234), Expect = 1e-023
Identities = 56/120 (46%), Positives = 74/120 (61%)
Frame = +3 / +1
Query: 126 DGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL 305
+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W+
Sbjct: 22 NGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLWV 201
Query: 306 *QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ * G
Sbjct: 202 *QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CSG 381
Score = 32.7 bits (65), Expect(2) = 1e-032
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AI+
Sbjct: 84 GLLNFLMRFFTIFLFSRGVAIY 19
>gb|BG039395.1|BG039395 NXSI_098_E10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_098_E10 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 555
Score = 268 bits (579), Expect = 3e-071
Identities = 110/134 (82%), Positives = 122/134 (91%)
Frame = +1 / +2
Query: 127 MAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 306
MA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 23 MATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGS 202
Query: 307 DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 486
+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++V
Sbjct: 203 NKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVLV 382
Query: 487 TNKLARLRSQEDE* 528
TNKLA+LRSQEDE*
Sbjct: 383 TNKLAKLRSQEDE* 424
Score = 127 bits (272), Expect(2) = 1e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 384 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 205
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 204 LDP*PIFGIRAHPLNFLLTRESIP 133
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -3
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 424 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 245
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 244 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 92
Score = 110 bits (234), Expect = 1e-023
Identities = 56/120 (46%), Positives = 74/120 (61%)
Frame = +3 / +1
Query: 126 DGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL 305
+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W+
Sbjct: 22 NGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLWV 201
Query: 306 *QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ * G
Sbjct: 202 *QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CSG 381
Score = 32.7 bits (65), Expect(2) = 1e-032
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AI+
Sbjct: 84 GLLNFLMRFFTIFLFSRGVAIY 19
>gb|BG275739.1|BG275739 NXSI_145_D02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_145_D02 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 524
Score = 268 bits (579), Expect = 3e-071
Identities = 110/134 (82%), Positives = 122/134 (91%)
Frame = +1 / +2
Query: 127 MAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 306
MA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 23 MATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGS 202
Query: 307 DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 486
+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++V
Sbjct: 203 NKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVLV 382
Query: 487 TNKLARLRSQEDE* 528
TNKLA+LRSQEDE*
Sbjct: 383 TNKLAKLRSQEDE* 424
Score = 127 bits (272), Expect(2) = 1e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 384 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 205
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 204 LDP*PIFGIRAHPLNFLLTRESIP 133
Score = 126 bits (270), Expect = 1e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 424 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 245
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 244 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 92
Score = 110 bits (234), Expect = 1e-023
Identities = 56/120 (46%), Positives = 74/120 (61%)
Frame = +3 / +1
Query: 126 DGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL 305
+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W+
Sbjct: 22 NGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLWV 201
Query: 306 *QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ * G
Sbjct: 202 *QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CSG 381
Score = 32.7 bits (65), Expect(2) = 1e-032
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AI+
Sbjct: 84 GLLNFLMRFFTIFLFSRGVAIY 19
>gb|BQ290653.1|BQ290653 NXRV047_H09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV047_H09 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 771
Score = 267 bits (577), Expect = 7e-071
Identities = 110/135 (81%), Positives = 122/135 (90%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 142 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 321
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 322 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 501
Query: 484 VTNKLARLRSQEDE* 528
VT KLA+LRSQEDE*
Sbjct: 502 VTXKLAKLRSQEDE* 546
Score = 127 bits (272), Expect(2) = 3e-032
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 506 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 327
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 326 LDP*PIFGIRAHPLNFLLTRESIP 255
Score = 126 bits (269), Expect = 2e-028
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 546 LLVFLATQLS*LVXHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 367
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 366 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 214
Score = 112 bits (240), Expect = 2e-024
Identities = 60/133 (45%), Positives = 78/133 (58%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 141 ENGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 320
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 321 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 500
Query: 483 GHQ*ACPSPQPGR 521
G + PGR
Sbjct: 501 GDXQVS*AA*PGR 539
Score = 31.3 bits (62), Expect(2) = 3e-032
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 206 GRLNFLMRFFTIFLFSRGVAIF 141
>gb|BG040412.1|BG040412 NXSI_108_A01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_108_A01 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 550
Score = 266 bits (575), Expect = 1e-070
Identities = 109/135 (80%), Positives = 121/135 (89%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 25 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 204
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 205 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 384
Query: 484 VTNKLARLRSQEDE* 528
VTNK +LRSQEDE*
Sbjct: 385 VTNKXXKLRSQEDE* 429
Score = 127 bits (272), Expect = 8e-029
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 389 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 210
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 209 LDP*PIFGIRAHPLNFLLTRESIP 138
Score = 127 bits (272), Expect(2) = 4e-033
Identities = 53/111 (47%), Positives = 79/111 (71%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 429 LLVFLATQLXXLVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 250
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 249 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 97
Score = 112 bits (239), Expect = 3e-024
Identities = 57/121 (47%), Positives = 75/121 (61%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 24 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 203
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 204 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 383
Query: 483 G 485
G
Sbjct: 384 G 386
Score = 34.1 bits (68), Expect(2) = 4e-033
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 89 GLLNFLMRFFTIFLFSRGVAIF 24
>gb|BQ702743.1|BQ702743 NXSI_132_A12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_132_A12 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 467
Score = 266 bits (575), Expect = 1e-070
Identities = 109/133 (81%), Positives = 120/133 (90%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 25 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 204
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 205 SNKKTRHYLPNGFKKFVVYNVHDLXLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 384
Query: 484 VTNKLARLRSQED 522
VTNKLA+LRSQED
Sbjct: 385 VTNKLAKLRSQED 423
Score = 125 bits (268), Expect(2) = 1e-032
Identities = 59/84 (70%), Positives = 64/84 (76%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S TL TTNFL LGR*CLVFL
Sbjct: 389 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRXRS*TL*TTNFLKPLGR*CLVFL 210
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 209 LDP*PIFGIRAHPLNFLLTRESIP 138
Score = 123 bits (263), Expect = 1e-027
Identities = 51/109 (46%), Positives = 76/109 (69%)
Frame = -2 / -3
Query: 522 IFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLL 343
+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK+ + NIV +KLL
Sbjct: 423 VFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKXXVMNIVDNKLL 244
Query: 342 KLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
K +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 243 KAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 97
Score = 112 bits (240), Expect = 2e-024
Identities = 57/121 (47%), Positives = 75/121 (61%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 24 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 203
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 204 V*QEDQTLPAQWL*EVCCLQCS*PXPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 383
Query: 483 G 485
G
Sbjct: 384 G 386
Score = 34.1 bits (68), Expect(2) = 1e-032
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 89 GLLNFLMRFFTIFLFSRGVAIF 24
>gb|BQ699739.1|BQ699739 NXRV128_C07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV128_C07 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 658
Score = 262 bits (567), Expect = 2e-069
Identities = 108/135 (80%), Positives = 120/135 (88%)
Frame = +1 / +2
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 50 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 229
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+A NVST KRK I ERAAQLD
Sbjct: 230 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAXNVSTLKRKSIXERAAQLD 409
Query: 478 IVVTNKLARLRSQED 522
IVVTNKLA+LRSQED
Sbjct: 410 IVVTNKLAKLRSQED 454
Score = 124 bits (265), Expect(2) = 7e-032
Identities = 53/107 (49%), Positives = 77/107 (71%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
L I LA + L+G H++KL SSL + L +V C+FST CPVVHHK++Q+ NI+++K
Sbjct: 460 LXILLATQLR*LVGHHDIKLCSSLXNRFPLQC*NVXCNFSTECPVVHHKKVQIFNIMYNK 281
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 280 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 140
Score = 121 bits (259), Expect = 5e-027
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARS I F V+TL A SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 420 VTTISSCAARSXIDFLFNVETLXATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 241
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 240 LDP*PILGIRAQPLNFLLTRESIP 169
Score = 111 bits (236), Expect = 7e-024
Identities = 55/123 (44%), Positives = 78/123 (63%)
Frame = +3 / +1
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 55 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 234
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ QR + E + ASC+ *+
Sbjct: 235 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCXQRFNIEEEIYXXASCTT*YR 414
Query: 483 GHQ 491
G Q
Sbjct: 415 GDQ 423
Score = 33.1 bits (66), Expect(2) = 7e-032
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 120 GLLNFFTRFFTIFLFMRGIAIF 55
>gb|CX712546.1|CX712546 RTPQ1_3_E03.b2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_3_E03_A032 3', mRNA sequence
Length = 658
Score = 260 bits (563), Expect = 6e-069
Identities = 107/132 (81%), Positives = 120/132 (90%)
Frame = +1 / +2
Query: 142 LTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTR 321
L +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS+KKTR
Sbjct: 2 LNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGSNKKTR 181
Query: 322 HYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLA 501
HYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++VTNKLA
Sbjct: 182 HYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVLVTNKLA 361
Query: 502 RLRSQEDE*TVS 537
+LRSQEDE* V+
Sbjct: 362 KLRSQEDE*LVT 397
Score = 131 bits (280), Expect(2) = 4e-032
Identities = 55/121 (45%), Positives = 85/121 (70%)
Frame = -2 / -1
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
++ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 418 NASTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 239
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +
Sbjct: 238 I*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTS 59
Query: 198 V 196
V
Sbjct: 58 V 56
Score = 128 bits (274), Expect = 4e-029
Identities = 63/99 (63%), Positives = 68/99 (68%)
Frame = -3 / -2
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 393 TSYSSSWLRSLANLLVTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*T 214
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 213 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 97
Score = 111 bits (238), Expect = 4e-024
Identities = 56/114 (49%), Positives = 71/114 (62%)
Frame = +3 / +1
Query: 144 DSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QEDQA 323
+ ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W+*QEDQ
Sbjct: 4 EQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLWV*QEDQT 183
Query: 324 LSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
L +Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ * G
Sbjct: 184 LPAQWL*EVCCLQCS*PRSSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*CSG 345
Score = 27.2 bits (53), Expect(2) = 4e-032
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF 150
GLLN L RFFTIF
Sbjct: 48 GLLNFLMRFFTIF 10
>gb|AW985283.1|AW985283 NXNV_135_D03_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_135_D03 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 532
Score = 260 bits (562), Expect = 8e-069
Identities = 108/137 (78%), Positives = 120/137 (87%)
Frame = +1 / +1
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 64 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 243
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST K K IVERAAQLD
Sbjct: 244 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKXKSIVERAAQLD 423
Query: 478 IVVTNKLARLRSQEDE* 528
IVVTNKLA+LRS E*
Sbjct: 424 IVVTNKLAKLRSXXXE* 474
Score = 128 bits (275), Expect(2) = 3e-033
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 434 VTTISSCAARSTIDXXFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 255
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 254 LDP*PILGIRAQPLNFLLTRESIP 183
Score = 125 bits (268), Expect = 3e-028
Identities = 53/107 (49%), Positives = 78/107 (72%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL A + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 474 LLXXXATQLR*LVGHHDIKLCSSLYNRFXLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 295
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 294 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 154
Score = 111 bits (236), Expect = 7e-024
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 69 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 248
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E ASC+ *+
Sbjct: 249 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEXXIYCRASCTT*YR 428
Query: 483 GHQ 491
G Q
Sbjct: 429 GDQ 437
Score = 33.1 bits (66), Expect(2) = 3e-033
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 134 GLLNFFTRFFTIFLFMRGIAIF 69
>gb|BG275297.1|BG275297 NXSI_142_B05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_142_B05 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 533
Score = 260 bits (562), Expect = 8e-069
Identities = 106/133 (79%), Positives = 118/133 (88%)
Frame = +1 / +2
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 17 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 196
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLD
Sbjct: 197 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLD 376
Query: 478 IVVTNKLARLRSQ 516
IVVTNKL +LR Q
Sbjct: 377 IVVTNKLXKLRXQ 415
Score = 128 bits (275), Expect(2) = 3e-033
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 387 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 208
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 207 LDP*PILGIRAQPLNFLLTRESIP 136
Score = 123 bits (263), Expect = 1e-027
Identities = 50/96 (52%), Positives = 74/96 (77%)
Frame = -2 / -2
Query: 495 LIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLLKLVGKIVPG 316
L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++KLLK + +IVPG
Sbjct: 394 LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNKLLKAIWQIVPG 215
Query: 315 LLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 214 LLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 107
Score = 111 bits (238), Expect = 4e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / +1
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 22 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 201
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+
Sbjct: 202 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YR 381
Query: 483 GHQ 491
G Q
Sbjct: 382 GDQ 390
Score = 33.1 bits (66), Expect(2) = 3e-033
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 87 GLLNFFTRFFTIFLFMRGIAIF 22
>gb|CX712625.1|CX712625 RTPQ1_3_E03.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_3_E03_A032 5', mRNA sequence
Length = 676
Score = 259 bits (559), Expect = 2e-068
Identities = 106/130 (81%), Positives = 119/130 (91%)
Frame = +1 / +3
Query: 148 QKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHY 327
+KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS+KKTRHY
Sbjct: 6 RKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGSNKKTRHY 185
Query: 328 LPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARL 507
LPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++VTNKLA+L
Sbjct: 186 LPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVLVTNKLAKL 365
Query: 508 RSQEDE*TVS 537
RSQEDE* V+
Sbjct: 366 RSQEDE*LVT 395
Score = 131 bits (280), Expect(2) = 4e-032
Identities = 55/121 (45%), Positives = 85/121 (70%)
Frame = -2 / -3
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
++ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 416 NASTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 237
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +
Sbjct: 236 I*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTS 57
Query: 198 V 196
V
Sbjct: 56 V 54
Score = 128 bits (274), Expect = 4e-029
Identities = 63/99 (63%), Positives = 68/99 (68%)
Frame = -3 / -1
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 391 TSYSSSWLRSLANLLVTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*T 212
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 211 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 95
Score = 111 bits (236), Expect = 7e-024
Identities = 56/112 (50%), Positives = 70/112 (62%)
Frame = +3 / +2
Query: 150 EDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QEDQALS 329
ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W+*QEDQ L
Sbjct: 8 EDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLWV*QEDQTLP 187
Query: 330 SQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCG 485
+Q +*EVC QC * +YDAQQDILC*NRTQ + + N C+ * G
Sbjct: 188 AQWL*EVCCLQCS*PRSSYDAQQDILC*NRTQCFIIKEESNCRTCCTT*CSG 343
Score = 27.2 bits (53), Expect(2) = 4e-032
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF 150
GLLN L RFFTIF
Sbjct: 46 GLLNFLMRFFTIF 8
>gb|DR384373.1|DR384373 RTHG1_1_G04.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_G04_A029 5', mRNA sequence
Length = 746
Score = 257 bits (556), Expect = 5e-068
Identities = 106/129 (82%), Positives = 117/129 (90%)
Frame = +1 / +2
Query: 142 LTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTR 321
+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIGYGS+KKTR
Sbjct: 2 MNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIGYGSNKKTR 181
Query: 322 HYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLA 501
HYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLDIVVTNKLA
Sbjct: 182 HYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLDIVVTNKLA 361
Query: 502 RLRSQEDE* 528
+LRSQEDE*
Sbjct: 362 KLRSQEDE* 388
Score = 130 bits (278), Expect(2) = 4e-032
Identities = 55/107 (51%), Positives = 80/107 (74%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 388 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 209
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 208 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 68
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 348 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 169
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 168 LDP*PILGIRAQPLNFLLTRESIP 97
Score = 108 bits (230), Expect = 5e-023
Identities = 54/116 (46%), Positives = 75/116 (64%)
Frame = +3 / +1
Query: 144 DSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QEDQA 323
+ ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W+*QEDQA
Sbjct: 4 EQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLWI*QEDQA 183
Query: 324 LSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCGHQ 491
L ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+ G Q
Sbjct: 184 LFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YRGDQ 351
Score = 28.1 bits (55), Expect(2) = 4e-032
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF 150
GLLN TRFFTIF
Sbjct: 48 GLLNFFTRFFTIF 10
>gb|BG039741.1|BG039741 NXSI_103_E05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_103_E05 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 517
Score = 257 bits (555), Expect = 7e-068
Identities = 107/135 (79%), Positives = 117/135 (86%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 46 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 225
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQ
Sbjct: 226 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQXXXX 405
Query: 484 VTNKLARLRSQEDE* 528
VTN A+LRSQEDE*
Sbjct: 406 VTNXXAKLRSQEDE* 450
Score = 124 bits (265), Expect(2) = 4e-032
Identities = 58/84 (69%), Positives = 63/84 (75%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 410 VTXXXXCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 231
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 230 LDP*PIFGIRAHPLNFLLTRESIP 159
Score = 117 bits (250), Expect = 8e-026
Identities = 50/111 (45%), Positives = 75/111 (67%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + + L S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 450 LLVFLATQLSXXVSHXXXXLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 271
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 270 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 118
Score = 111 bits (236), Expect = 7e-024
Identities = 55/116 (47%), Positives = 73/116 (62%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 45 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 224
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCS 470
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+
Sbjct: 225 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCT 392
Score = 34.1 bits (68), Expect(2) = 4e-032
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 110 GLLNFLMRFFTIFLFSRGVAIF 45
>gb|AW043150.1|AW043150 ST29H12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST29H12, mRNA sequence
Length = 601
Score = 256 bits (554), Expect = 1e-067
Identities = 105/131 (80%), Positives = 117/131 (89%)
Frame = +1 / +3
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 9 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 188
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV + +LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 189 SNKKTRHYLPNGFKKFVVYNVHDPDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 368
Query: 484 VTNKLARLRSQ 516
VTN LA+LRSQ
Sbjct: 369 VTNXLAKLRSQ 401
Score = 127 bits (273), Expect(2) = 3e-033
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 373 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSGS*TL*TTNFLKPLGR*CLVFL 194
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 193 LDP*PIFGIRAHPLNFLLTRESIP 122
Score = 117 bits (250), Expect = 8e-026
Identities = 49/107 (45%), Positives = 74/107 (69%)
Frame = -2 / -3
Query: 516 LAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLLKL 337
LA + + N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +KLLK
Sbjct: 401 LATQLS*XVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKVWVMNIVDNKLLKA 222
Query: 336 VGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
+G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 221 IGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 81
Score = 112 bits (239), Expect = 3e-024
Identities = 57/121 (47%), Positives = 75/121 (61%)
Frame = +3 / +2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 8 ENGDSSAEQEDCEEAHQEVQKASKRPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 187
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 188 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 367
Query: 483 G 485
G
Sbjct: 368 G 370
Score = 34.1 bits (68), Expect(2) = 3e-033
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 73 GLLNFLMRFFTIFLFSRGVAIF 8
>gb|DR384292.1|DR384292 RTHG1_1_G04.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_G04_A029 3', mRNA sequence
Length = 732
Score = 256 bits (554), Expect = 1e-067
Identities = 106/127 (83%), Positives = 116/127 (91%)
Frame = +1 / +2
Query: 148 QKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHY 327
+KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIGYGS+KKTRHY
Sbjct: 5 KKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIGYGSNKKTRHY 184
Query: 328 LPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARL 507
LPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLDIVVTNKLA+L
Sbjct: 185 LPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLDIVVTNKLAKL 364
Query: 508 RSQEDE* 528
RSQEDE*
Sbjct: 365 RSQEDE* 385
Score = 130 bits (278), Expect(2) = 4e-032
Identities = 55/107 (51%), Positives = 80/107 (74%)
Frame = -2 / -3
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 385 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 206
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 205 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 65
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 345 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 166
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 165 LDP*PILGIRAQPLNFLLTRESIP 94
Score = 108 bits (230), Expect = 5e-023
Identities = 54/116 (46%), Positives = 75/116 (64%)
Frame = +3 / +1
Query: 144 DSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QEDQA 323
+ ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W+*QEDQA
Sbjct: 1 EQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLWI*QEDQA 180
Query: 324 LSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HCGHQ 491
L ++ +*EVC C +G +YDAQQDILC*+ TQR + E + ASC+ *+ G Q
Sbjct: 181 LFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEEIYCRASCTT*YRGDQ 348
Score = 28.1 bits (55), Expect(2) = 4e-032
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF 150
GLLN TRFFTIF
Sbjct: 45 GLLNFFTRFFTIF 7
>gb|DR097342.1|DR097342 STRR1_34_C01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_34_C01_A033 3', mRNA sequence
Length = 718
Score = 255 bits (552), Expect = 2e-067
Identities = 107/135 (79%), Positives = 119/135 (88%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR +K SWRRPKGIDSRV RKFKGC LMPNIGYG
Sbjct: 28 KMATPLLNRKIVKKRIKKFKRPQSDRGIWVKESWRRPKGIDSRVGRKFKGCALMPNIGYG 207
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 208 FNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 387
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+L SQEDE*
Sbjct: 388 VTNKLAKLGSQEDE* 432
Score = 123 bits (263), Expect = 1e-027
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = -3 / -3
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL
Sbjct: 392 VTKTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFL 213
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
P P+ GI+ HPLNF TRESIP
Sbjct: 212 LNP*PIFGIRAHPLNFLPTRESIP 141
Score = 123 bits (263), Expect(2) = 4e-031
Identities = 51/111 (45%), Positives = 78/111 (70%)
Frame = -2 / -2
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FLA + L+ N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +K
Sbjct: 432 LLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNK 253
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLV+ I+N+ H+G SL+ P+T ++TL P P +L+ +V
Sbjct: 252 LLKAIGQVVSGLLVKPITNIWHKGTSLKFSPNT*INTLRPPPTFLDPNTSV 100
Score = 111 bits (237), Expect = 5e-024
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 27 ENGDSSAEQEDCEEAHQEVQTASERPRYLGQGKLAEA*GY*FTCWEKI*GMCPYAKYWLW 206
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 207 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CF 386
Query: 483 G 485
G
Sbjct: 387 G 389
Score = 31.3 bits (62), Expect(2) = 4e-031
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 92 GRLNFLMRFFTIFLFSRGVAIF 27
>gb|BF609742.1|BF609742 NXSI_048_H06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_048_H06 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 465
Score = 253 bits (548), Expect = 7e-067
Identities = 105/135 (77%), Positives = 116/135 (85%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 46 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 225
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L LLMMHN YCAEIAHNVS+ K IV RAAQLD++
Sbjct: 226 SNKKTRHYLPNGFKKFVVYNVHDLXLLMMHNXXYCAEIAHNVSSLKXXAIVXRAAQLDVL 405
Query: 484 VTNKLARLRSQEDE* 528
VTNKLA+LR QEDE*
Sbjct: 406 VTNKLAKLRXQEDE* 450
Score = 119 bits (254), Expect(2) = 1e-030
Identities = 56/84 (66%), Positives = 61/84 (72%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AAR TI+ F +TLCAISAQY LCII S TL TTNFL LGR*CLVFL
Sbjct: 410 VTRTSSCAARXTIAXXFNDETLCAISAQYXXLCIIRRXRS*TL*TTNFLKPLGR*CLVFL 231
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 230 LDP*PIFGIRAHPLNFLLTRESIP 159
Score = 115 bits (246), Expect = 3e-025
Identities = 50/111 (45%), Positives = 75/111 (67%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL+FL + L+ N+KL S+ ++ L ++VCDFS V VVHHK+ + NIV +K
Sbjct: 450 LLVFLXTQLS*LVSHQNIKLCSTXYNCXXL***NIVCDFSAVXXVVHHKKXXVMNIVDNK 271
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLK +G++V GLLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 270 LLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 118
Score = 105 bits (223), Expect = 4e-022
Identities = 51/101 (50%), Positives = 66/101 (65%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ+A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 45 ENGDSSAEQEDCEEAHQEVQKASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 224
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQ 425
+*QEDQ L +Q +*EVC QC * +YDAQ IL *NRTQ
Sbjct: 225 V*QEDQTLPAQWL*EVCCLQCS*PXPSYDAQXXILR*NRTQ 347
Score = 34.1 bits (68), Expect(2) = 1e-030
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN L RFFTIF + G AIF
Sbjct: 110 GLLNFLMRFFTIFLFSRGVAIF 45
>gb|BF517570.1|BF517570 NXSI_026_B07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_026_B07 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 481
Score = 253 bits (546), Expect = 1e-066
Identities = 105/137 (76%), Positives = 116/137 (84%)
Frame = +1 / +3
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 39 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 218
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHN +L MMHN +CAE+AHNVST K K IVERAAQLD
Sbjct: 219 YGSNKKTRHYLPNXFKKFVVHNXKXXDLXMMHNXXFCAEVAHNVSTLKXKSIVERAAQLD 398
Query: 478 IVVTNKLARLRSQEDE* 528
IVVTNKLA+LRSQE E*
Sbjct: 399 IVVTNKLAKLRSQEXE* 449
Score = 122 bits (262), Expect(2) = 2e-031
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ LCII S S LCTTNFL G+*CLVFL
Sbjct: 409 VTTISSCAARSTIDXLFNVETLCATSAQNXXLCIIXRSXSLXLCTTNFLXXFGK*CLVFL 230
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 229 LDP*PILGIRAQPLNFLLTRESIP 158
Score = 105 bits (224), Expect = 3e-022
Identities = 48/107 (44%), Positives = 72/107 (67%)
Frame = -2 / -3
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LL LA + L+G H++KL SSL++ L +VVC+FST VVHH ++ I+++K
Sbjct: 449 LLXLLATQLR*LVGHHDIKLCSSLYNRFXLQC*NVVCNFSTEXXVVHHXKVXXFXIMYNK 270
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IV GLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 269 LLKXIWQIVSGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 129
Score = 33.1 bits (66), Expect(2) = 2e-031
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 109 GLLNFFTRFFTIFLFMRGIAIF 44
>gb|BF010697.1|BF010697 NXCI_066_D05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_066_D05 5' similar to Arabidopsis
thaliana sequence At4g18100 ribosomal protein L32 -like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 399
Score = 252 bits (544), Expect = 2e-066
Identities = 103/126 (81%), Positives = 113/126 (89%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 22 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 201
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKKFVV+NV +L LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD++
Sbjct: 202 SNKKTRHYLPNGFKKFVVYNVHDLXLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDVL 381
Query: 484 VTNKLA 501
VTNKLA
Sbjct: 382 VTNKLA 399
Score = 125 bits (268), Expect(2) = 9e-032
Identities = 59/84 (70%), Positives = 64/84 (76%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT SS AARSTI+ F +TLCAISAQYVLLCII S TL TTNFL LGR*CLVFL
Sbjct: 386 VTRTSSCAARSTIAFLFNDETLCAISAQYVLLCIIRRXRS*TL*TTNFLKPLGR*CLVFL 207
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ GI+ HPLNF LTRESIP
Sbjct: 206 LDP*PIFGIRAHPLNFLLTRESIP 135
Score = 115 bits (246), Expect = 3e-025
Identities = 48/100 (48%), Positives = 71/100 (71%)
Frame = -2 / -1
Query: 495 LIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLLKLVGKIVPG 316
L+ N+KL S+ ++ L ++VCDFS VCPVVHHK+ + NIV +KLLK +G++V G
Sbjct: 393 LVSHQNIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKX*VMNIVDNKLLKAIGQVVSG 214
Query: 315 LLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
LLVR I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 213 LLVRPITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 94
Score = 111 bits (238), Expect = 4e-024
Identities = 57/121 (47%), Positives = 74/121 (61%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 21 ENGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 200
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 201 V*QEDQTLPAQWL*EVCCLQCS*PXPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT*CS 380
Query: 483 G 485
G
Sbjct: 381 G 383
Score = 31.3 bits (62), Expect(2) = 9e-032
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 86 GRLNFLMRFFTIFLFSRGVAIF 21
>gb|BX255612.1|BX255612 BX255612 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP007G02 similar to 60S RIBOSOMAL PROTEIN
L32, mRNA sequence
Length = 673
Score = 244 bits (528), Expect = 4e-064
Identities = 101/120 (84%), Positives = 109/120 (90%)
Frame = +1 / -3
Query: 178 FKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVV 357
FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS+KKTRHYLPN FKKFVV
Sbjct: 671 FKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGSNKKTRHYLPNGFKKFVV 492
Query: 358 HNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE*TVS 537
HNV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLDI+VTNKLA+LRSQEDE* V+
Sbjct: 491 HNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDILVTNKLAKLRSQEDE*LVT 312
Score = 130 bits (278), Expect = 1e-029
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -3 / +1
Query: 533 TVYXXXXXXXXXXXLVTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCT 354
T Y LVT +SS AARSTI+ F +TLCAISAQYVLLCII S S TL T
Sbjct: 316 TSYSSSWLRSLANLLVTRISSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TLWT 495
Query: 353 TNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
TNFL LGR*CLVFL +P P+ GI+ HPLNF LTRESIP
Sbjct: 496 TNFLKPLGR*CLVFLLDP*PIFGIRAHPLNFLLTRESIP 612
Score = 127 bits (273), Expect = 6e-029
Identities = 54/121 (44%), Positives = 83/121 (68%)
Frame = -2 / +3
Query: 558 HSKTTASRNSLLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQ 379
+ T + + LL+FLA + L+ N+KL S+ ++ L ++VCDFSTVCPVVHHK+
Sbjct: 291 NESTCKNCHKLLVFLATQLS*LVSHQNIKLCSTFYNCFPL***NIVCDFSTVCPVVHHKK 470
Query: 378 LQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEALVA 199
+ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+ ++TL P P +L+A +
Sbjct: 471 V*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNA*INTLRPPPTFLDADTS 650
Query: 198 V 196
V
Sbjct: 651 V 653
>gb|CR394462.1|CR394462 CR394462 RN Pinus pinaster cDNA clone RN79F01, mRNA sequence
Length = 377
Score = 244 bits (527), Expect = 5e-064
Identities = 98/124 (79%), Positives = 111/124 (89%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 4 KMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIGYG 183
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIV 483
S+KKTRHYLPN FKK+VVHNV +L+LLMMHNRT+CAE+AHNVST RK IVERAAQLDI+
Sbjct: 184 SNKKTRHYLPNGFKKYVVHNVKDLDLLMMHNRTFCAEVAHNVSTLPRKSIVERAAQLDIL 363
Query: 484 VTNK 495
VTNK
Sbjct: 364 VTNK 375
Score = 118 bits (252), Expect(2) = 4e-030
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT +SS AARSTI V+TLCA SAQ VLLCII S S TLCTT FL G+*CLVFL
Sbjct: 368 VTKISSCAARSTIDFLGNVETLCATSAQNVLLCIIRRSRSLTLCTTYFLKPFGK*CLVFL 189
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 188 LDP*PILGIRAQPLNFLLTRESIP 117
Score = 115 bits (246), Expect = 3e-025
Identities = 48/96 (50%), Positives = 71/96 (73%)
Frame = -2 / -3
Query: 495 LIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLLKLVGKIVPG 316
L+G ++KL SSL++ +VVC+FST CPVVHHK++Q+ NI++D LLK + +IVPG
Sbjct: 375 LVGHQDIKLCSSLYNRFPRQC*NVVCNFSTECPVVHHKKVQIFNIMYDILLKAIWQIVPG 196
Query: 315 LLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 195 LLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 88
Score = 113 bits (242), Expect = 1e-024
Identities = 56/123 (45%), Positives = 79/123 (64%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 3 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 182
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA*HC 482
+*QEDQAL ++ +*EVCR C +G +YDAQQDILC*+ TQR + + ASC+ *+
Sbjct: 183 I*QEDQALFAKWL*EVCRT*C*RSGPSYDAQQDILC*SCTQRFNIAEEIYCRASCTT*YL 362
Query: 483 GHQ 491
G Q
Sbjct: 363 GDQ 371
Score = 33.1 bits (66), Expect(2) = 4e-030
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 68 GLLNFFTRFFTIFLFMRGIAIF 3
>gb|BF517130.1|BF517130 NXSI_009_G11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_009_G11 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 424
Score = 243 bits (524), Expect = 1e-063
Identities = 100/130 (76%), Positives = 112/130 (86%)
Frame = +1 / +3
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LM NIG
Sbjct: 33 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMXNIG 212
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHN +L+LLMMH +CAE+AHNVST KRK IVERAAQLD
Sbjct: 213 YGSNKKTRHYLPNGFKKFVVHNXKDLDLLMMHXXXFCAEVAHNVSTLKRKSIVERAAQLD 392
Query: 478 IVVTNKLARL 507
IVVTNKLA+L
Sbjct: 393 IVVTNKLAKL 422
Score = 115 bits (245), Expect(2) = 4e-029
Identities = 53/84 (63%), Positives = 59/84 (70%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ CII S S LCTTNFL G+*CLVFL
Sbjct: 403 VTTISSCAARSTIDFLFNVETLCATSAQNXXXCIIRRSRSXXLCTTNFLKPFGK*CLVFL 224
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+ I+ PLNF LTRESIP
Sbjct: 223 LDP*PIXXIRAQPLNFLLTRESIP 152
Score = 109 bits (232), Expect = 3e-023
Identities = 46/96 (47%), Positives = 70/96 (72%)
Frame = -2 / -3
Query: 495 LIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLLKLVGKIVPG 316
L+G H++KL SSL++ L +VVC+FST VHHK++Q+ I+++KLLK + +IVPG
Sbjct: 410 LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTEXXXVHHKKVQIFXIMYNKLLKAIWQIVPG 231
Query: 315 LLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 230 LLVRSITNIXHKGTALELSPHT*INTLWSPPVLLDS 123
Score = 33.1 bits (66), Expect(2) = 4e-029
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 103 GLLNFFTRFFTIFLFMRGIAIF 38
>gb|BE762025.1|BE762025 NXCI_076_B04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_076_B04 5' similar to Arabidopsis
thaliana sequence At4g18100 ribosomal protein L32 -like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 378
Score = 240 bits (518), Expect = 9e-063
Identities = 97/119 (81%), Positives = 107/119 (89%)
Frame = +1 / +1
Query: 124 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 303
KMA PLL +KIVKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYG
Sbjct: 22 KMATPLLNRKIVKKRIKKFKRPQSDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYG 201
Query: 304 SDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDI 480
S+KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ KRK IVERAAQLD+
Sbjct: 202 SNKKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLKRKAIVERAAQLDV 378
Score = 124 bits (265), Expect(2) = 2e-031
Identities = 58/80 (72%), Positives = 63/80 (78%)
Frame = -3 / -2
Query: 476 SS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFLSEPY 297
SS AARSTI+ F +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL +P
Sbjct: 374 SSCAARSTIAFLFNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFLLDP* 195
Query: 296 PMLGIKVHPLNFRLTRESIP 237
P+ GI+ HPLNF LTRESIP
Sbjct: 194 PIFGIRAHPLNFLLTRESIP 135
Score = 113 bits (242), Expect = 1e-024
Identities = 47/95 (49%), Positives = 70/95 (73%)
Frame = -2 / -1
Query: 480 NVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLLKLVGKIVPGLLVRA 301
N+KL S+ ++ L ++VCDFS VCPVVHHK++ + NIV +KLLK +G++V GLLVR
Sbjct: 378 NIKLCSTFYNCFPL***NIVCDFSAVCPVVHHKKV*VMNIVDNKLLKAIGQVVSGLLVRP 199
Query: 300 ISNVRHQGASLELPPDTGVDTLGPAPAWLEALVAV 196
I+N+ H+G SL+ P+T ++TL P P +L+A +V
Sbjct: 198 ITNIWHKGTSLKFSPNT*INTLRPPPTFLDADTSV 94
Score = 110 bits (235), Expect = 1e-023
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +3 / +3
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G ++ + ED EEA Q VQ A RP + Q KLA+A GY C ++ GM A +W+W
Sbjct: 21 ENGDSSAEQEDCEEAHQEVQTASERPTYLRQGKLAEA*GY*FTC*EKI*GMCPYAKYWLW 200
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCSA* 476
+*QEDQ L +Q +*EVC QC * +YDAQQDIL *NRTQ + + N C+ *
Sbjct: 201 V*QEDQTLPAQWL*EVCCLQCS*PRPSYDAQQDILR*NRTQCFIIKEESNCRTCCTT* 374
Score = 31.3 bits (62), Expect(2) = 2e-031
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
G LN L RFFTIF + G AIF
Sbjct: 86 GRLNFLMRFFTIFLFSRGVAIF 21
>gb|AW981694.1|AW981694 PC15F02 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC15F02, mRNA sequence
Length = 584
Score = 136 bits (291), Expect(2) = 2e-062
Identities = 54/72 (75%), Positives = 61/72 (84%)
Frame = +1 / +3
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR + +W RPKGIDSRVRRKFKGC LMPNIG
Sbjct: 63 RRKMAIPLMNKKIVKKRVKKFKRPXSDRXITVXENWXRPKGIDSRVRRKFKGCALMPNIG 242
Query: 298 YGSDKKTRHYLP 333
YGS+KKTRHYLP
Sbjct: 243 YGSNKKTRHYLP 278
Score = 123 bits (264), Expect(2) = 2e-062
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1 / +2
Query: 334 NKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARLRS 513
N FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLDIV NKL +LR+
Sbjct: 278 NGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLDIVGXNKLXKLRN 457
Query: 514 QEDE 525
QEDE
Sbjct: 458 QEDE 469
Score = 81.7 bits (172), Expect(3) = 4e-031
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = -2 / -2
Query: 525 LIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKL 346
LI L + L+ H+VKL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++KL
Sbjct: 469 LILLVTQLRXLVXPHDVKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNKL 290
Query: 345 LKLVGK 328
LK +GK
Sbjct: 289 LKAIGK 272
Score = 74.4 bits (156), Expect(2) = 6e-022
Identities = 36/50 (72%), Positives = 37/50 (74%)
Frame = -3 / -3
Query: 482 TMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLL 333
TMSS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL L
Sbjct: 426 TMSSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPL 277
Score = 57.9 bits (120), Expect(3) = 4e-031
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -3 / -2
Query: 344 LNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
L +G+*CLVFL P P+LGI+ PLNF LTRESIP
Sbjct: 289 LKAIGK*CLVFLLXP*PILGIRAQPLNFLLTRESIP 182
Score = 49.6 bits (102), Expect(2) = 6e-022
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = -2 / -1
Query: 330 KIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAP 223
+IVPGLLVR I+N+ H+G +LEL P T ++TL P
Sbjct: 275 QIVPGLLVRXITNIGHKGTALELSPHT*INTLWSPP 168
Score = 33.1 bits (66), Expect(3) = 4e-031
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 133 GLLNFFTRFFTIFLFMRGIAIF 68
>gb|BX682457.1|BX682457 BX682457 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 116H06 similar to 60S ribosomal protein L32,
mRNA sequence
Length = 650
Score = 236 bits (509), Expect = 2e-061
Identities = 98/131 (74%), Positives = 112/131 (85%)
Frame = +1 / +1
Query: 136 PLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKK 315
P Q+ ++ ++ KRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIGYGS+KK
Sbjct: 52 PSHEQEDCEEAREEVKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIGYGSNKK 231
Query: 316 TRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNK 495
TRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST KRK IVERAAQLDI+VTNK
Sbjct: 232 TRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERAAQLDILVTNK 411
Query: 496 LARLRSQEDE* 528
LA+LRSQEDE*
Sbjct: 412 LAKLRSQEDE* 444
Score = 126 bits (270), Expect(2) = 2e-030
Identities = 54/107 (50%), Positives = 79/107 (73%)
Frame = -2 / -3
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G ++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 444 LLILLATQLR*LVGHQDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 265
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 264 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 124
Score = 126 bits (269), Expect = 2e-028
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = -3 / -1
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VT +SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 404 VTKISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 225
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 224 LDP*PILGIRAQPLNFLLTRESIP 153
Score = 96.8 bits (205), Expect(2) = 2e-024
Identities = 45/93 (48%), Positives = 64/93 (68%)
Frame = +3 / +3
Query: 213 QAKLAQAQGYRLPCQAEVQGMHLDA*HWIWL*QEDQALSSQQV*EVCRAQCF*AGVAYDA 392
Q +LA+ +GY C+ +VQG+ A +W+W+*QEDQAL ++ +*EVC C +G +YDA
Sbjct: 129 QGELAETKGY*FTCEEKVQGLCPYAQYWLWI*QEDQALFAKWL*EVCCT*C*RSGPSYDA 308
Query: 393 QQDILC*NRTQRVH*EAQGNRGASCSA*HCGHQ 491
QQDILC*+ TQR + E + ASC+ *+ G Q
Sbjct: 309 QQDILC*SCTQRFNIEEEIYCRASCTT*YLGDQ 407
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1 / +2
Query: 118 RLKMAVPLLTQKIVKKRVKQ 177
R KMA+PL+ +KIVKKRVK+
Sbjct: 35 RRKMAIPLMNKKIVKKRVKK 94
Score = 26.3 bits (51), Expect(2) = 2e-030
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3 / -3
Query: 182 LNCLTRFFTIF*VNSGTAIF 123
L+ TRFFTIF G AIF
Sbjct: 99 LDFFTRFFTIFLFMRGIAIF 40
>gb|BQ701976.1|BQ701976 NXSI_122_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_122_H02 5' similar to Arabidopsis thaliana
sequence At5g46430 ribosomal protein L32 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 421
Score = 235 bits (508), Expect = 2e-061
Identities = 96/127 (75%), Positives = 107/127 (84%)
Frame = +1 / +3
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 39 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 218
Query: 298 YGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLD 477
YGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNRT+CAE+AHNVST K K IVERAAQ
Sbjct: 219 YGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNRTFCAEVAHNVSTLKXKSIVERAAQXX 398
Query: 478 IVVTNKL 498
NKL
Sbjct: 399 XXXXNKL 419
Score = 119 bits (255), Expect(2) = 2e-030
Identities = 54/77 (70%), Positives = 59/77 (76%)
Frame = -3 / -1
Query: 467 AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFLSEPYPML 288
AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL +P P+L
Sbjct: 388 AARSTIDXLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFLLDP*PIL 209
Query: 287 GIKVHPLNFRLTRESIP 237
GI+ PLNF LTRESIP
Sbjct: 208 GIRAQPLNFLLTRESIP 158
Score = 111 bits (236), Expect = 7e-024
Identities = 47/96 (48%), Positives = 69/96 (71%)
Frame = -2 / -3
Query: 495 LIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDKLLKLVGKIVPG 316
L+ L SSL++ L +VVC+FST CPVVHHK++Q+ NI+++KLLK + +IVPG
Sbjct: 416 LVXXXXXXLCSSLYNRFXLQC*NVVCNFSTECPVVHHKKVQIFNIMYNKLLKAIWQIVPG 237
Query: 315 LLVRAISNVRHQGASLELPPDTGVDTLGPAPAWLEA 208
LLVR+I+N+ H+G +LEL P T ++TL P L++
Sbjct: 236 LLVRSITNIGHKGTALELSPHT*INTLWSPPVLLDS 129
Score = 105 bits (225), Expect = 2e-022
Identities = 53/116 (45%), Positives = 74/116 (63%)
Frame = +3 / +2
Query: 123 EDGGAAVDSEDREEAGQAVQEAPPRPLQVPQAKLAQAQGYRLPCQAEVQGMHLDA*HWIW 302
E+G + + ED EEA + VQEA Q +LA+ +GY C+ +VQG+ A +W+W
Sbjct: 44 ENGDPSHEQEDCEEAREEVQEASE*SSYYCQGELAETKGY*FTCEEKVQGLCPYAQYWLW 223
Query: 303 L*QEDQALSSQQV*EVCRAQCF*AGVAYDAQQDILC*NRTQRVH*EAQGNRGASCS 470
+*QEDQAL ++ +*EVC C +G +YDAQQDILC*+ TQR + E ASC+
Sbjct: 224 I*QEDQALFAKWL*EVCCT*C*RSGPSYDAQQDILC*SCTQRFNIEEXIYCRASCT 391
Score = 33.1 bits (66), Expect(2) = 2e-030
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 109 GLLNFFTRFFTIFLFMRGIAIF 44
>gb|DR682025.1|DR682025 EST1072100 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA565, mRNA sequence
Length = 604
Score = 224 bits (484), Expect = 4e-058
Identities = 91/103 (88%), Positives = 98/103 (95%)
Frame = +1 / -2
Query: 220 SWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNR 399
+WRRPKGIDSRVRRKFKGC LMPNIGYGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNR
Sbjct: 600 NWRRPKGIDSRVRRKFKGCALMPNIGYGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNR 421
Query: 400 TYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE* 528
T+CAE+AHNVST KRK IVERAAQLDIVVTNKLA+LRSQEDE*
Sbjct: 420 TFCAEVAHNVSTLKRKSIVERAAQLDIVVTNKLAKLRSQEDE* 292
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / +2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 332 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 511
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 512 LDP*PILGIRAQPLNFLLTRESIP 583
Score = 127 bits (273), Expect = 6e-029
Identities = 54/102 (52%), Positives = 77/102 (75%)
Frame = -2 / +1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 292 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 471
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAP 223
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P
Sbjct: 472 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPP 597
>gb|DR682026.1|DR682026 EST1072101 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA565 3' end, mRNA sequence
Length = 601
Score = 224 bits (484), Expect = 4e-058
Identities = 91/103 (88%), Positives = 98/103 (95%)
Frame = +1 / +2
Query: 220 SWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNR 399
+WRRPKGIDSRVRRKFKGC LMPNIGYGS+KKTRHYLPN FKKFVVHNV +L+LLMMHNR
Sbjct: 5 NWRRPKGIDSRVRRKFKGCALMPNIGYGSNKKTRHYLPNGFKKFVVHNVKDLDLLMMHNR 184
Query: 400 TYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE* 528
T+CAE+AHNVST KRK IVERAAQLDIVVTNKLA+LRSQEDE*
Sbjct: 185 TFCAEVAHNVSTLKRKSIVERAAQLDIVVTNKLAKLRSQEDE* 313
Score = 128 bits (275), Expect = 3e-029
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = -3 / -2
Query: 488 VTTMSS*AARSTISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFL 309
VTT+SS AARSTI F V+TLCA SAQ VLLCII S S TLCTTNFL G+*CLVFL
Sbjct: 273 VTTISSCAARSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTLCTTNFLKPFGK*CLVFL 94
Query: 308 SEPYPMLGIKVHPLNFRLTRESIP 237
+P P+LGI+ PLNF LTRESIP
Sbjct: 93 LDP*PILGIRAQPLNFLLTRESIP 22
Score = 127 bits (273), Expect = 6e-029
Identities = 54/102 (52%), Positives = 77/102 (75%)
Frame = -2 / -1
Query: 528 LLIFLAAETGKLIGDHNVKLSSSLHDFLALLSGHVVCDFSTVCPVVHHKQLQLRNIVHDK 349
LLI LA + L+G H++KL SSL++ L +VVC+FST CPVVHHK++Q+ NI+++K
Sbjct: 313 LLILLATQLR*LVGHHDIKLCSSLYNRFPLQC*NVVCNFSTECPVVHHKKVQIFNIMYNK 134
Query: 348 LLKLVGKIVPGLLVRAISNVRHQGASLELPPDTGVDTLGPAP 223
LLK + +IVPGLLVR+I+N+ H+G +LEL P T ++TL P
Sbjct: 133 LLKAIWQIVPGLLVRSITNIGHKGTALELSPHT*INTLWSPP 8
>gb|BQ699273.1|BQ699273 NXRV121_F03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV121_F03 5' similar to Arabidopsis thaliana
sequence At4g18100 ribosomal protein L32 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 407
Score = 209 bits (450), Expect(2) = 2e-056
Identities = 84/109 (77%), Positives = 93/109 (85%)
Frame = +1 / +1
Query: 130 AVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSD 309
A PLL +K VKKR+K+FKRP DR C+K SWRRPKGIDSRVRRKFKGC LMPNIGYGS+
Sbjct: 34 ATPLLNRKXVKKRIKKFKRPQXDRRICVKESWRRPKGIDSRVRRKFKGCALMPNIGYGSN 213
Query: 310 KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIV 456
KKTRHYLPN FKKFVV+NV +L+LLMMHNRTYCAEIAHNVS+ IV
Sbjct: 214 KKTRHYLPNGFKKFVVYNVHDLDLLMMHNRTYCAEIAHNVSSLXXXXIV 360
Score = 111 bits (236), Expect = 7e-024
Identities = 51/73 (69%), Positives = 55/73 (75%)
Frame = -3 / -1
Query: 455 TISLRFLVDTLCAISAQYVLLCIISNSSSETLCTTNFLNLLGR*CLVFLSEPYPMLGIKV 276
TI +TLCAISAQYVLLCII S S TL TTNFL LGR*CLVFL +P P+ GI+
Sbjct: 359 TIXXXXNDETLCAISAQYVLLCIIRRSRS*TL*TTNFLKPLGR*CLVFLLDP*PIFGIRA 180
Query: 275 HPLNFRLTRESIP 237
HPLNF LTRESIP
Sbjct: 179 HPLNFLLTRESIP 141
Score = 107 bits (228), Expect = 9e-023
Identities = 42/78 (53%), Positives = 61/78 (78%)
Frame = -2 / -3
Query: 429 HVVCDFSTVCPVVHHKQLQLRNIVHDKLLKLVGKIVPGLLVRAISNVRHQGASLELPPDT 250
++VCDFS VCPVVHHK++ + NIV +KLLK +G++V GLLVR I+N+ H+G SL+ P+T
Sbjct: 333 NIVCDFSAVCPVVHHKKV*VMNIVDNKLLKAIGQVVSGLLVRPITNIWHKGTSLKFSPNT 154
Query: 249 GVDTLGPAPAWLEALVAV 196
++TL P P +L+A +V
Sbjct: 153 *INTLRPPPTFLDADTSV 100
Score = 30.4 bits (60), Expect(2) = 2e-056
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1 / +2
Query: 460 RAAQLDIVVTNKLA 501
RAAQLD++VTNKLA
Sbjct: 365 RAAQLDVLVTNKLA 406
>gb|AW981749.1|AW981749 PC18C01 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC18C01, mRNA sequence
Length = 477
Score = 154 bits (331), Expect(3) = 1e-054
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = +1 / +2
Query: 118 RLKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIG 297
R KMA+PL+ +KIVKKRVK+FKRP DR +K +WRRPKGIDSRVRRKFKGC LMPNIG
Sbjct: 41 RRKMAIPLMNKKIVKKRVKKFKRPQSDRRITVKENWRRPKGIDSRVRRKFKGCALMPNIG 220
Query: 298 YGSDKKTRHYLPNKFKKFVV 357
YGS+KKTRHY PN FKKFVV
Sbjct: 221 YGSNKKTRHYSPNGFKKFVV 280
Score = 73.9 bits (155), Expect(3) = 1e-054
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +1 / +1
Query: 358 HNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQL 474
HNV +L+LLMMHNRT+CAE+AHNVST KRK IVER L
Sbjct: 280 HNVKDLDLLMMHNRTFCAEVAHNVSTLKRKSIVERLHNL 396
Score = 67.0 bits (140), Expect(3) = 6e-024
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = -3 / -1
Query: 362 LCTTNFLNLLGR*CLVFLSEPYPMLGIKVHPLNFRLTRESIP 237
+ TTNFL G *CLVFL +P P+LGI+ PLNF LTRESIP
Sbjct: 285 IMTTNFLKPFGE*CLVFLLDP*PILGIRAQPLNFLLTRESIP 160
Score = 48.3 bits (99), Expect(3) = 6e-024
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -3 / -2
Query: 464 ARSTISLRFLVDTLCAISAQYVLLCIISNSSSETL 360
+RSTI F V+TLCA SAQ VLLCII S S TL
Sbjct: 386 SRSTIDFLFNVETLCATSAQNVLLCIIRRSRSLTL 282
Score = 33.1 bits (66), Expect(3) = 6e-024
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 188 GLLNCLTRFFTIF*VNSGTAIF 123
GLLN TRFFTIF G AIF
Sbjct: 111 GLLNFFTRFFTIFLFMRGIAIF 46
Score = 24.0 bits (46), Expect(3) = 1e-054
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 466 AQLDIVVTNKL 498
AQLD VVTNKL
Sbjct: 387 AQLDXVVTNKL 419
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 324,570,043
Number of Sequences: 355925
Number of extensions: 4349031
Number of successful extensions: 35855
Number of sequences better than 1.0e-020: 115
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9489505520
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)