TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448637.2.1
(1190 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX648234.1|CX648234 COLD1_27_H06.b1_A029 Root cold Pinus... 339 7e-096
gb|CO165491.1|CO165491 FLD1_54_H04.g1_A029 Root flooded Pin... 339 2e-092
gb|CF477415.1|CF477415 RTWW3_7_G07.g1_A022 Well-watered lob... 327 4e-092
gb|CX648317.1|CX648317 COLD1_27_H06.g1_A029 Root cold Pinus... 335 5e-091
gb|CO361124.1|CO361124 NDL2_2_H09.g1_A029 Needles control 2... 333 2e-090
gb|CO165781.1|CO165781 FLD1_57_B08.b1_A029 Root flooded Pin... 326 1e-088
gb|CF478695.1|CF478695 RTWW3_16_A03.g1_A022 Well-watered lo... 321 5e-087
gb|CO200550.1|CO200550 GEO2_8_C12.b1_A032 Root gravitropism... 319 2e-086
gb|CO369603.1|CO369603 RTK1_48_F07.b1_A029 Roots minus pota... 314 1e-084
gb|CF393159.1|CF393159 RTDR3_17_B10.g1_A022 Loblolly pine r... 312 3e-084
gb|DR056364.1|DR056364 RTCA1_29_F12.g1_A029 Roots minus cal... 299 9e-084
gb|CV034557.1|CV034557 RTNACL1_10_A06.b1_A029 Roots plus ad... 310 1e-083
gb|CV034621.1|CV034621 RTNACL1_10_A06.g1_A029 Roots plus ad... 308 4e-083
gb|DR056287.1|DR056287 RTCA1_29_F12.b1_A029 Roots minus cal... 303 2e-081
gb|DR742450.1|DR742450 RTCU1_4_D01.b1_A029 Roots plus added... 302 3e-081
gb|CO368668.1|CO368668 RTK1_42_C01.b1_A029 Roots minus pota... 301 6e-081
gb|CF672241.1|CF672241 RTCNT1_62_G02.b1_A029 Root control P... 300 1e-080
gb|CX713945.1|CX713945 RTPQ1_15_G12.b1_A032 Roots treated w... 299 3e-080
gb|DR120678.1|DR120678 RTMG1_31_F04.b1_A029 Roots minus mag... 294 9e-079
gb|CO368744.1|CO368744 RTK1_42_C01.g1_A029 Roots minus pota... 285 4e-076
gb|CO166187.1|CO166187 FLD1_60_A12.b1_A029 Root flooded Pin... 284 1e-075
gb|BX249925.1|BX249925 BX249925 Pinus pinaster differenciat... 253 3e-073
gb|CF672326.1|CF672326 RTCNT1_62_G02.g1_A029 Root control P... 245 6e-071
gb|CF470504.1|CF470504 RTDS1_13_D09.b1_A015 Drought-stresse... 267 1e-070
gb|BQ634357.1|BQ634357 NXRV067_H08_F NXRV (Nsf Xylem Root w... 261 8e-069
gb|DR013276.1|DR013276 HEAT1_18_G05.b1_A029 Root at 37 C fo... 255 5e-067
gb|BQ654722.1|BQ654722 NXRV084_G12_F NXRV (Nsf Xylem Root w... 247 1e-064
gb|BF221274.1|BF221274 NXCI_156_G07_F NXCI (Nsf Xylem Compr... 246 2e-064
gb|BQ696330.1|BQ696330 NXPV_040_B04_F NXPV (Nsf Xylem Plani... 240 2e-062
gb|CF470607.1|CF470607 RTDS1_13_D09.g1_A015 Drought-stresse... 228 5e-059
gb|DR090523.1|DR090523 RTAL1_15_D10.g1_A029 Roots plus adde... 187 2e-055
gb|DR387675.1|DR387675 RTHG1_23_H11.b1_A029 Roots plus adde... 204 5e-055
gb|AI920150.1|AI920150 1680 Pine Lambda Zap Xylem library P... 195 7e-055
gb|CO169862.1|CO169862 NDL1_10_D06.b1_A029 Needles control ... 213 2e-054
gb|BF220484.1|BF220484 NXCI_147_B05_F NXCI (Nsf Xylem Compr... 207 1e-052
gb|AW698003.1|AW698003 NXNV_079_D09_F Nsf Xylem Normal wood... 206 3e-052
gb|AA739773.1|AA739773 538 PtIFG2 Pinus taeda cDNA clone 88... 203 3e-051
gb|CO368658.1|CO368658 RTK1_42_B01.b1_A029 Roots minus pota... 203 3e-051
gb|AW736869.1|AW736869 NXNV_083_H08_F Nsf Xylem Normal wood... 200 1e-050
gb|CF476401.1|CF476401 RTWW3_1_A12.b1_A022 Well-watered lob... 187 2e-046
gb|DR168719.1|DR168719 RTPHOS1_27_H08.b1_A029 Roots minus p... 187 2e-046
gb|CO165410.1|CO165410 FLD1_54_H04.b1_A029 Root flooded Pin... 155 3e-044
gb|BE810198.1|BE810198 NXCI_061_C04_F NXCI (Nsf Xylem Compr... 171 1e-041
gb|CF393740.1|CF393740 RTDS2_1_A05.b1_A021 Drought-stressed... 169 4e-041
gb|CF393839.1|CF393839 RTDS2_1_A05.g1_A021 Drought-stressed... 151 2e-040
gb|BE496570.1|BE496570 NXCI_020_G05_F NXCI (Nsf Xylem Compr... 164 1e-039
gb|BE520016.1|BE520016 NXCI_028_B08_F NXCI (Nsf Xylem Compr... 160 2e-038
gb|CF476510.1|CF476510 RTWW3_1_A12.g1_A022 Well-watered lob... 131 5e-037
gb|DR168796.1|DR168796 RTPHOS1_27_H08.g1_A029 Roots minus p... 90 9e-035
gb|CO361058.1|CO361058 NDL2_2_H09.b1_A029 Needles control 2... 147 1e-034
gb|AW626638.1|AW626638 NXNV067G01 Nsf Xylem Normal wood Ver... 144 2e-033
gb|CO164509.1|CO164509 FLD1_48_A12.g1_A029 Root flooded Pin... 95 1e-032
gb|CF477362.1|CF477362 RTWW3_7_G07.b1_A022 Well-watered lob... 84 9e-031
gb|AW056602.1|AW056602 ST53C10 Pine TriplEx shoot tip libra... 111 4e-030
gb|DR180707.1|DR180707 RTMNUT1_34_G11.b1_A029 Roots minus m... 132 6e-030
gb|CO164434.1|CO164434 FLD1_48_A12.b1_A029 Root flooded Pin... 130 2e-029
gb|CO200632.1|CO200632 GEO2_8_C12.g1_A032 Root gravitropism... 123 3e-027
gb|BM902723.1|BM902723 NXLV_073_D01_F NXLV (Nsf Xylem Late ... 120 2e-026
gb|BX678846.1|BX678846 BX678846 RS Pinus pinaster cDNA clon... 117 2e-025
gb|CF391995.1|CF391995 RTDR3_12_D08.b1_A022 Loblolly pine r... 114 1e-024
gb|BF220384.1|BF220384 NXCI_144_F07_F NXCI (Nsf Xylem Compr... 110 2e-023
gb|CF396022.1|CF396022 RTDS2_20_H10.g1_A021 Drought-stresse... 74 2e-023
gb|AI919971.1|AI919971 1501 Pine Lambda Zap Xylem library P... 89 7e-023
gb|BE187179.1|BE187179 NXNV_160_C01_F Nsf Xylem Normal wood... 80 7e-021
>gb|CX648234.1|CX648234 COLD1_27_H06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_H06_A029 3', mRNA sequence
Length = 802
Score = 339 bits (735), Expect(2) = 7e-096
Identities = 130/210 (61%), Positives = 173/210 (82%)
Frame = -3 / -1
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 646 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 467
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFAN 655
PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN
Sbjct: 466 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFAN 287
Query: 654 KAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVS 475
+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S
Sbjct: 286 QAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPAS 107
Query: 474 FDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+D+A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 106 YDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 17
Score = 171 bits (368), Expect(2) = 2e-043
Identities = 101/211 (47%), Positives = 116/211 (54%)
Frame = +2 / +3
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 18 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 197
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 198 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 377
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 378 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 557
Query: 926 TY*RAIAATLS*RCISYGN*KAIVSTDLKLQ 1018
TY*RAIAAT S + +S N AIV+TDL+ +
Sbjct: 558 TY*RAIAATFSRKWLS*VNWNAIVNTDLRFE 650
Score = 102 bits (217), Expect(2) = 4e-024
Identities = 58/167 (34%), Positives = 88/167 (52%)
Frame = +1 / +2
Query: 514 RQVRVALFH*FRDV*E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGA 693
R + + L + + E F + V++ V R +LQ N+ F HVQPCL+C+ K+R L
Sbjct: 146 R*ISITLLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRT 325
Query: 694 AQNSIWMMPEHFQQCFTSSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRL 873
A + I M+P+ FQ T K H + + L NP+ K F R+ P ++* +
Sbjct: 326 AHDCI*MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKCFWSPRRWPWANM*IQS 505
Query: 874 GGRYSHRHSLHSRNDTTNILTGHCCNAVLKVHLIRELKGDCQHRSQI 1014
Y H + L +TT+ILT H C+ +V LI +L+ + QHRSQI
Sbjct: 506 RRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQI 646
Score = 32.7 bits (65), Expect(2) = 7e-096
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 721 TLDLASALEVGSTGTRTSGDS 659
Score = 29.9 bits (59), Expect(2) = 4e-024
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1 / +2
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRY 462
SH+GP+ + E AV + ++LP Y
Sbjct: 17 SHKGPIHKHENDAVGTVFVIQNLPSY 94
Score = 25.4 bits (49), Expect(2) = 2e-043
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 1034 SPEAWGAAEPTSRLDAKSSV 1093
SP+ +PTSR +AKS+V
Sbjct: 663 SPDVLVPVDPTSRAEAKSNV 722
>gb|CO165491.1|CO165491 FLD1_54_H04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H04_A029 5', mRNA sequence
Length = 815
Score = 339 bits (735), Expect = 2e-092
Identities = 130/210 (61%), Positives = 173/210 (82%)
Frame = -3 / -1
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 758 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 579
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFAN 655
PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN
Sbjct: 578 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFAN 399
Query: 654 KAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVS 475
+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S
Sbjct: 398 QAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPAS 219
Query: 474 FDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+D+A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 218 YDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 129
Score = 171 bits (368), Expect = 9e-042
Identities = 101/211 (47%), Positives = 116/211 (54%)
Frame = +2 / +1
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 130 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 309
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 310 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 489
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 490 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 669
Query: 926 TY*RAIAATLS*RCISYGN*KAIVSTDLKLQ 1018
TY*RAIAAT S + +S N AIV+TDL+ +
Sbjct: 670 TY*RAIAATFSRKWLS*VNWNAIVNTDLRFE 762
Score = 102 bits (217), Expect(2) = 4e-024
Identities = 58/167 (34%), Positives = 88/167 (52%)
Frame = +1 / +3
Query: 514 RQVRVALFH*FRDV*E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGA 693
R + + L + + E F + V++ V R +LQ N+ F HVQPCL+C+ K+R L
Sbjct: 258 R*ISITLLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRT 437
Query: 694 AQNSIWMMPEHFQQCFTSSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRL 873
A + I M+P+ FQ T K H + + L NP+ K F R+ P ++* +
Sbjct: 438 AHDCI*MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKCFWSPRRWPWANM*IQS 617
Query: 874 GGRYSHRHSLHSRNDTTNILTGHCCNAVLKVHLIRELKGDCQHRSQI 1014
Y H + L +TT+ILT H C+ +V LI +L+ + QHRSQI
Sbjct: 618 RRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQI 758
Score = 29.9 bits (59), Expect(2) = 4e-024
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1 / +3
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRY 462
SH+GP+ + E AV + ++LP Y
Sbjct: 129 SHKGPIHKHENDAVGTVFVIQNLPSY 206
>gb|CF477415.1|CF477415 RTWW3_7_G07.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_7_G07_A022 5', mRNA sequence
Length = 752
Score = 327 bits (708), Expect(2) = 4e-092
Identities = 125/205 (60%), Positives = 167/205 (81%)
Frame = -3 / +1
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 136 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 315
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFAN 655
PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN
Sbjct: 316 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFAN 495
Query: 654 KAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVS 475
+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S
Sbjct: 496 QAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPAS 675
Query: 474 FDQAVAWKVLGEDSNIHCLAFCFVN 400
+D+ +AWKVL ++ + HC+ F F+N
Sbjct: 676 YDRVIAWKVLNDEDSTHCIVFMFMN 750
Score = 161 bits (346), Expect(2) = 2e-040
Identities = 97/207 (46%), Positives = 112/207 (54%)
Frame = +2 / -1
Query: 398 QLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAFLP 577
Q QW+L SS TF A S E PI + H P GR A*PC I S P
Sbjct: 752 QFINMKTMQWVLSSSFRTFQAITRSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLLRP 573
Query: 578 DSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPSD 757
SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S A
Sbjct: 572 FSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQS 393
Query: 758 *LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY*R 937
+ S P W *L Q A V+ASG P L P EG IA+ TL T TLRTY*R
Sbjct: 392 ARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY*R 213
Query: 938 AIAATLS*RCISYGN*KAIVSTDLKLQ 1018
AIAAT S + +S N AIV+TDL+ +
Sbjct: 212 AIAATFSRKWLS*VNWNAIVNTDLRFE 132
Score = 102 bits (217), Expect(2) = 6e-022
Identities = 58/167 (34%), Positives = 88/167 (52%)
Frame = +1 / -3
Query: 514 RQVRVALFH*FRDV*E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGA 693
R + + L + + E F + V++ V R +LQ N+ F HVQPCL+C+ K+R L
Sbjct: 636 R*ISITLLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRT 457
Query: 694 AQNSIWMMPEHFQQCFTSSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRL 873
A + I M+P+ FQ T K H + + L NP+ K F R+ P ++* +
Sbjct: 456 AHDCI*MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKCFWSPRRWPWANM*IQS 277
Query: 874 GGRYSHRHSLHSRNDTTNILTGHCCNAVLKVHLIRELKGDCQHRSQI 1014
Y H + L +TT+ILT H C+ +V LI +L+ + QHRSQI
Sbjct: 276 RRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQI 136
Score = 32.7 bits (65), Expect(2) = 4e-092
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 61 TLDLASALEVGSTGTRTSGDS 123
Score = 25.4 bits (49), Expect(2) = 2e-040
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / -1
Query: 1034 SPEAWGAAEPTSRLDAKSSV 1093
SP+ +PTSR +AKS+V
Sbjct: 119 SPDVLVPVDPTSRAEAKSNV 60
Score = 22.6 bits (43), Expect(2) = 6e-022
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +3 / -2
Query: 423 SGCCYPRRAPSTLQLGRKKHGGPFLTCTRLTAGTRSPV 536
SG C PS L G K P+L +PV
Sbjct: 727 SGYCLRHSEPSKLLPGHMKQACPYLRDISQQVDKHNPV 614
>gb|CX648317.1|CX648317 COLD1_27_H06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_H06_A029 5', mRNA sequence
Length = 809
Score = 335 bits (725), Expect = 5e-091
Identities = 128/208 (61%), Positives = 171/208 (82%)
Frame = -3 / -2
Query: 1008 RSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFP 829
RSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G P
Sbjct: 808 RSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTP 629
Query: 828 EAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKA 649
EA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN+A
Sbjct: 628 EALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQA 449
Query: 648 GLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFD 469
GLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S+D
Sbjct: 448 GLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYD 269
Query: 468 QAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 268 RAIAWKVLNDEDSTHCIVFMFMNWSFM* 185
Score = 169 bits (364), Expect = 3e-041
Identities = 101/208 (48%), Positives = 114/208 (54%)
Frame = +2 / +3
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 186 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 365
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 366 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 545
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 546 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 725
Query: 926 TY*RAIAATLS*RCISYGN*KAIVSTDL 1009
TY*RAIAAT S + +S N AIV+TDL
Sbjct: 726 TY*RAIAATFSRKWLS*VNWNAIVNTDL 809
Score = 98.2 bits (208), Expect(2) = 7e-023
Identities = 56/165 (33%), Positives = 86/165 (52%)
Frame = +1 / +2
Query: 514 RQVRVALFH*FRDV*E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGA 693
R + + L + + E F + V++ V R +LQ N+ F HVQPCL+C+ K+R L
Sbjct: 314 R*ISITLLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRT 493
Query: 694 AQNSIWMMPEHFQQCFTSSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRL 873
A + I M+P+ FQ T K H + + L NP+ K F R+ P ++* +
Sbjct: 494 AHDCI*MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKCFWSPRRWPWANM*IQS 673
Query: 874 GGRYSHRHSLHSRNDTTNILTGHCCNAVLKVHLIRELKGDCQHRS 1008
Y H + L +TT+ILT H C+ +V LI +L+ + QHRS
Sbjct: 674 RRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRS 808
Score = 29.9 bits (59), Expect(2) = 7e-023
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1 / +2
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRY 462
SH+GP+ + E AV + ++LP Y
Sbjct: 185 SHKGPIHKHENDAVGTVFVIQNLPSY 262
>gb|CO361124.1|CO361124 NDL2_2_H09.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_2_H09_A029 5', mRNA sequence
Length = 826
Score = 333 bits (721), Expect = 2e-090
Identities = 128/203 (63%), Positives = 170/203 (83%)
Frame = -3 / +1
Query: 993 IAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATL 814
IAFQF +E HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G PEA TL
Sbjct: 1 IAFQFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTL 180
Query: 813 ARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDML 634
ARWVCQSY +HLG+ELL + E+LLK LWHH DA++CCS K P+FTFAN+AGLDML
Sbjct: 181 ARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDML 360
Query: 633 ETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAW 454
ET+LVALQD++L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S MGR S+D+A+AW
Sbjct: 361 ETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAW 540
Query: 453 KVLGEDSNIHCLAFCFVNWSFV* 385
KVL ++ N HC+AF F+NWSFV*
Sbjct: 541 KVLNDEENPHCIAFMFMNWSFV* 609
Score = 172 bits (370), Expect = 5e-042
Identities = 98/201 (48%), Positives = 110/201 (54%)
Frame = +2 / -3
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 605 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 426
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPA 748
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 425 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 246
Query: 749 PSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRT 928
L +S P+W *L QT A V+ASG P L P P EG A+ TLCT T RT
Sbjct: 245 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 66
Query: 929 Y*RAIAATLS*RCISYGN*KA 991
Y*RA+ AT S + S N KA
Sbjct: 65 Y*RAMDATFSRKWFSKVNWKA 3
Score = 73.5 bits (154), Expect(2) = 2e-021
Identities = 39/119 (32%), Positives = 67/119 (56%)
Frame = +1 / -2
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRYSLVERNMXXXXXXXXXXRQVRVALFH*FRDV*E* 564
S++GP+ + E A+ + ++ E LP S V + R + ++L H ++*
Sbjct: 609 SNKGPIHKHECYAMGIFLIIEDLPSNSPVIGSRPAHARNTHSSR*IGISLLHNLSNI*AK 430
Query: 565 CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNSIWMMPEHFQQCF 741
F + +V+ L * +LQ N+ CF*HV+ CL+ K ++R L+GA + I ++P+ FQQ F
Sbjct: 429 AFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGIRVVPKCFQQRF 253
Score = 49.6 bits (102), Expect(2) = 2e-021
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +1 / -2
Query: 781 MVVITLANPSSKCGSFREARKHPMPSI*TRLGGRYSHRHSLHSRNDTTNILTGHCCNAVL 960
M +TL NP+ K F AR+ P P +*T+ H + LH +TT+ILT H CN +
Sbjct: 213 MESVTLTNPTCKGKCFWGARR*PRPKM*TQSRRG*GHGNPLHGCYNTTHILTSHGCNILP 34
Query: 961 KVHLIRELKGD 993
+ L EL+ +
Sbjct: 33 *MVLKSELESN 1
>gb|CO165781.1|CO165781 FLD1_57_B08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_B08_A029 3', mRNA sequence
Length = 757
Score = 326 bits (707), Expect = 1e-088
Identities = 125/200 (62%), Positives = 167/200 (83%)
Frame = -3 / +1
Query: 984 QFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARW 805
QF +E HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G PEA TLARW
Sbjct: 1 QFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARW 180
Query: 804 VCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETS 625
VCQSY +HLG+ELL + E+LLK LWHH DA++CCS K P+FTFAN+AGLDMLET+
Sbjct: 181 VCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETT 360
Query: 624 LVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVL 445
LVALQD++L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S MGR S+D+A+AWKVL
Sbjct: 361 LVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVL 540
Query: 444 GEDSNIHCLAFCFVNWSFV* 385
++ N HC+AF F+NWSFV*
Sbjct: 541 NDEENPHCIAFMFMNWSFV* 600
Score = 170 bits (365), Expect = 2e-041
Identities = 96/198 (48%), Positives = 108/198 (54%)
Frame = +2 / -3
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 596 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 417
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPA 748
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 416 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 237
Query: 749 PSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRT 928
L +S P+W *L QT A V+ASG P L P P EG A+ TLCT T RT
Sbjct: 236 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 57
Query: 929 Y*RAIAATLS*RCISYGN 982
Y*RA+ AT S + S N
Sbjct: 56 Y*RAMDATFSRKWFSKVN 3
Score = 112 bits (240), Expect = 4e-024
Identities = 64/189 (33%), Positives = 102/189 (53%)
Frame = +1 / -2
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRYSLVERNMXXXXXXXXXXRQVRVALFH*FRDV*E* 564
S++GP+ + E A+ + ++ E LP S V + R + ++L H ++*
Sbjct: 600 SNKGPIHKHECYAMGIFLIIEDLPSNSPVIGSRPAHARNTHSSR*IGISLLHNLSNI*AK 421
Query: 565 CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNSIWMMPEHFQQCFT 744
F + +V+ L * +LQ N+ CF*HV+ CL+ K ++R L+GA + I ++P+ FQQ F
Sbjct: 420 AFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGIRVVPKCFQQRFI 241
Query: 745 SSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRLGGRYSHRHSLHSRNDTT 924
K ++ M +TL NP+ K F AR+ P P +*T+ H + LH +TT
Sbjct: 240 DLRIRSKKLYSQMESVTLTNPTCKGKCFWGARR*PRPKM*TQSRRG*GHGNPLHGCYNTT 61
Query: 925 NILTGHCCN 951
+ILT H CN
Sbjct: 60 HILTSHGCN 34
>gb|CF478695.1|CF478695 RTWW3_16_A03.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_16_A03_A022 5', mRNA sequence
Length = 733
Score = 321 bits (696), Expect = 5e-087
Identities = 133/226 (58%), Positives = 173/226 (76%)
Frame = -3 / +3
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNL 1009
ID D +PL+ RVI LD DG TLDLASSL++GSA + S D + NL
Sbjct: 54 IDASLADSSPLLPSGFRVIPLDSGMDGSSPNRTLDLASSLEIGSAGARTSVDYGGNSGNL 233
Query: 1008 RSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFP 829
RSVLTIAFQF +E HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G P
Sbjct: 234 RSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTP 413
Query: 828 EAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKA 649
EA TLARWVCQSY +HLG+ELL + E+LLK LWHH DA++CCS K P+FTFAN+A
Sbjct: 414 EALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQA 593
Query: 648 GLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPS 511
GLDMLET+LVALQD++L+KI D++GRK+ SDI+++M+QGYAYLP+
Sbjct: 594 GLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPA 731
Score = 167 bits (360), Expect = 1e-040
Identities = 102/227 (44%), Positives = 119/227 (52%)
Frame = +2 / -1
Query: 509 PDGRYA*PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLK 688
P GR A PC I +SE P SS I S+ SC ATR VSNMS PA FA V G K
Sbjct: 733 PAGR*AYPCCII*AISEQKLLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFK 554
Query: 689 EQHRTASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRP 868
EQH AS CQS+F+ S L +S P+W *L QT A V+ASG P L P P
Sbjct: 553 EQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEP 374
Query: 869 DWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIVSTDLKLQSSGDASPEAW 1048
EG A+ TLCT T RTY*RA+ AT S + S N KAIV+TDL+L S +
Sbjct: 373 SREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWKAIVNTDLRLPEFPP*STDVR 194
Query: 1049 GAAEPTSRLDAKSSVXPXXTPSXFTSSXMTRXXXXINGASSXXXXSI 1189
A+P SR +A+S+V PS S MT G S SI
Sbjct: 193 APADPISREEARSNVRFGLEPSIPESKGMTLKPEGSKGELSAKDASI 53
Score = 109 bits (232), Expect = 5e-023
Identities = 61/168 (36%), Positives = 97/168 (57%)
Frame = +1 / -3
Query: 514 RQVRVALFH*FRDV*E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGA 693
R + ++L H ++* F + +V+ L * +LQ N+ CF*HV+ CL+ K ++R L+GA
Sbjct: 728 R*IGISLLHNLSNI*AKAFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGA 549
Query: 694 AQNSIWMMPEHFQQCFTSSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRL 873
+ I ++P+ FQQ F K ++ M +TL NP+ K F AR+ P P +*T+
Sbjct: 548 THDGIRVVPKCFQQRFIDLRIRSKKLYSQMESVTLTNPTCKGKCFWGARR*PRPKM*TQS 369
Query: 874 GGRYSHRHSLHSRNDTTNILTGHCCNAVLKVHLIRELKGDCQHRSQIA 1017
H + LH +TT+ILT H CN + + L EL+ +CQ+ S++A
Sbjct: 368 RRG*GHGNPLHGCYNTTHILTSHGCNILP*MVLKSELESNCQY*SEVA 225
>gb|CO200550.1|CO200550 GEO2_8_C12.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_C12_A032 3', mRNA sequence
Length = 833
Score = 319 bits (691), Expect = 2e-086
Identities = 122/194 (62%), Positives = 163/194 (84%)
Frame = -3 / +2
Query: 966 HLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYH 787
HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G PEA TLARWVCQSY
Sbjct: 5 HLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYR 184
Query: 786 YHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQD 607
+HLG+ELL + E+LLK LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD
Sbjct: 185 FHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQD 364
Query: 606 LTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNI 427
++L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S MGR S+D+A+AWKVL ++ N
Sbjct: 365 ISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENP 544
Query: 426 HCLAFCFVNWSFV* 385
HC+AF F+NWSFV*
Sbjct: 545 HCIAFMFMNWSFV* 586
Score = 169 bits (364), Expect = 3e-041
Identities = 94/190 (49%), Positives = 105/190 (55%)
Frame = +2 / -3
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 582 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 403
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPA 748
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 402 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 223
Query: 749 PSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRT 928
L +S P+W *L QT A V+ASG P L P P EG A+ TLCT T RT
Sbjct: 222 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 43
Query: 929 Y*RAIAATLS 958
Y*RA+ AT S
Sbjct: 42 Y*RAMDATFS 13
Score = 112 bits (240), Expect = 4e-024
Identities = 64/189 (33%), Positives = 102/189 (53%)
Frame = +1 / -2
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRYSLVERNMXXXXXXXXXXRQVRVALFH*FRDV*E* 564
S++GP+ + E A+ + ++ E LP S V + R + ++L H ++*
Sbjct: 586 SNKGPIHKHECYAMGIFLIIEDLPSNSPVIGSRPAHARNTHSSR*IGISLLHNLSNI*AK 407
Query: 565 CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNSIWMMPEHFQQCFT 744
F + +V+ L * +LQ N+ CF*HV+ CL+ K ++R L+GA + I ++P+ FQQ F
Sbjct: 406 AFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGIRVVPKCFQQRFI 227
Query: 745 SSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRLGGRYSHRHSLHSRNDTT 924
K ++ M +TL NP+ K F AR+ P P +*T+ H + LH +TT
Sbjct: 226 DLRIRSKKLYSQMESVTLTNPTCKGKCFWGARR*PRPKM*TQSRRG*GHGNPLHGCYNTT 47
Query: 925 NILTGHCCN 951
+ILT H CN
Sbjct: 46 HILTSHGCN 20
>gb|CO369603.1|CO369603 RTK1_48_F07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_F07_A029 3', mRNA sequence
Length = 707
Score = 314 bits (679), Expect = 1e-084
Identities = 120/192 (62%), Positives = 161/192 (83%)
Frame = -3 / +2
Query: 960 QDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYH 781
+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G PEA TLARWVCQSY +H
Sbjct: 2 RENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFH 181
Query: 780 LGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLT 601
LG+ELL + E+LLK LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++
Sbjct: 182 LGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDIS 361
Query: 600 LDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHC 421
L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S MGR S+D+A+AWKVL ++ N HC
Sbjct: 362 LEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHC 541
Query: 420 LAFCFVNWSFV* 385
+AF F+NWSFV*
Sbjct: 542 IAFMFMNWSFV* 577
Score = 169 bits (364), Expect = 3e-041
Identities = 94/190 (49%), Positives = 105/190 (55%)
Frame = +2 / -3
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 573 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 394
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPA 748
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 393 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 214
Query: 749 PSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRT 928
L +S P+W *L QT A V+ASG P L P P EG A+ TLCT T RT
Sbjct: 213 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 34
Query: 929 Y*RAIAATLS 958
Y*RA+ AT S
Sbjct: 33 Y*RAMDATFS 4
Score = 112 bits (240), Expect = 4e-024
Identities = 64/189 (33%), Positives = 102/189 (53%)
Frame = +1 / -2
Query: 385 SHEGPVDEAERQAVDVAILAEHLPRYSLVERNMXXXXXXXXXXRQVRVALFH*FRDV*E* 564
S++GP+ + E A+ + ++ E LP S V + R + ++L H ++*
Sbjct: 577 SNKGPIHKHECYAMGIFLIIEDLPSNSPVIGSRPAHARNTHSSR*IGISLLHNLSNI*AK 398
Query: 565 CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNSIWMMPEHFQQCFT 744
F + +V+ L * +LQ N+ CF*HV+ CL+ K ++R L+GA + I ++P+ FQQ F
Sbjct: 397 AFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGIRVVPKCFQQRFI 218
Query: 745 SSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRLGGRYSHRHSLHSRNDTT 924
K ++ M +TL NP+ K F AR+ P P +*T+ H + LH +TT
Sbjct: 217 DLRIRSKKLYSQMESVTLTNPTCKGKCFWGARR*PRPKM*TQSRRG*GHGNPLHGCYNTT 38
Query: 925 NILTGHCCN 951
+ILT H CN
Sbjct: 37 HILTSHGCN 11
>gb|CF393159.1|CF393159 RTDR3_17_B10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_17_B10_A022 5', mRNA
sequence
Length = 710
Score = 312 bits (676), Expect = 3e-084
Identities = 130/222 (58%), Positives = 168/222 (75%)
Frame = -3 / +1
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNL 1009
ID D +PL+ RVI LD DG TLDLASSL++GSA + S D + NL
Sbjct: 43 IDASLADSSPLLPSGFRVIPLDSGMDGSSPNRTLDLASSLEIGSAGARTSVDYGGNSGNL 222
Query: 1008 RSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFP 829
RSVLTIAFQF +E HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G P
Sbjct: 223 RSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTP 402
Query: 828 EAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKA 649
EA TLARWVCQSY +HLG+ELL + E+LLK LWHH DA++CCS K P+FTFAN+A
Sbjct: 403 EALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQA 582
Query: 648 GLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYA 523
GLDMLET+LVALQD++L+KI D+ GRK+ SDI+++M+QGYA
Sbjct: 583 GLDMLETTLVALQDISLEKILDDXGRKSFCSDIAQIMQQGYA 708
Score = 163 bits (351), Expect = 2e-039
Identities = 98/220 (44%), Positives = 115/220 (52%)
Frame = +2 / -1
Query: 530 PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTAS 709
PC I +SE P SS I S+ SC ATR VSNMS PA FA V G KEQH AS
Sbjct: 701 PCCII*AISEQKLLRPXSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMAS 522
Query: 710 G*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIA 889
CQS+F+ S L +S P+W *L QT A V+ASG P L P P EG A
Sbjct: 521 EWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARA 342
Query: 890 IDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIVSTDLKLQSSGDASPEAWGAAEPTS 1069
+ TLCT T RTY*RA+ AT S + S N KAIV+TDL+L S + A+P S
Sbjct: 341 MATLCTDATTPRTY*RAMDATFSRKWFSKVNWKAIVNTDLRLPEFPP*STDVRAPADPIS 162
Query: 1070 RLDAKSSVXPXXTPSXFTSSXMTRXXXXINGASSXXXXSI 1189
R +A+S+V PS S MT G S SI
Sbjct: 161 REEARSNVRFGLEPSIPESKGMTLKPEGSKGELSAKDASI 42
Score = 108 bits (230), Expect = 9e-023
Identities = 60/164 (36%), Positives = 95/164 (57%)
Frame = +1 / -3
Query: 526 VALFH*FRDV*E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGAAQNS 705
++L H ++* F + +V+ L * +LQ N+ CF*HV+ CL+ K ++R L+GA +
Sbjct: 705 ISLLHNLSNI*AKAFAAXVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDG 526
Query: 706 IWMMPEHFQQCFTSSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRLGGRY 885
I ++P+ FQQ F K ++ M +TL NP+ K F AR+ P P +*T+
Sbjct: 525 IRVVPKCFQQRFIDLRIRSKKLYSQMESVTLTNPTCKGKCFWGARR*PRPKM*TQSRRG* 346
Query: 886 SHRHSLHSRNDTTNILTGHCCNAVLKVHLIRELKGDCQHRSQIA 1017
H + LH +TT+ILT H CN + + L EL+ +CQ+ S++A
Sbjct: 345 GHGNPLHGCYNTTHILTSHGCNILP*MVLKSELESNCQY*SEVA 214
>gb|DR056364.1|DR056364 RTCA1_29_F12.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_F12_A029 5', mRNA sequence
Length = 638
Score = 299 bits (647), Expect(2) = 9e-084
Identities = 117/186 (62%), Positives = 154/186 (82%)
Frame = -3 / +2
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 80 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 259
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFAN 655
PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN
Sbjct: 260 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFAN 439
Query: 654 KAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVS 475
+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S
Sbjct: 440 QAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPAS 619
Query: 474 FDQAVA 457
+D+A+A
Sbjct: 620 YDRAIA 637
Score = 146 bits (314), Expect(2) = 6e-036
Identities = 90/187 (48%), Positives = 104/187 (55%)
Frame = +2 / -3
Query: 458 ATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSN 637
A A S E PI + H P GR A*PC I S P SS+ILS SC+AT VS+
Sbjct: 636 AIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLLRPFSSRILSKDISCNATNVVSS 457
Query: 638 MSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLAS 817
MS+PA FANV G EQH AS CQS F+ S A + S P W *L Q A
Sbjct: 456 MSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQSARNRSTPMWSL*L*QIQRAR 277
Query: 818 VAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIV 997
V+ASG P L P EG IA+ TL T TLRTY*RAIAAT S + +S N AIV
Sbjct: 276 VSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY*RAIAATFSRKWLS*VNWNAIV 97
Query: 998 STDLKLQ 1018
+TDL+ +
Sbjct: 96 NTDLRFE 76
Score = 102 bits (217), Expect = 6e-021
Identities = 58/167 (34%), Positives = 88/167 (52%)
Frame = +1 / -2
Query: 514 RQVRVALFH*FRDV*E*CFPS*LVEDLV*RQVLQRNKRCF*HVQPCLVCKRKHRFLLKGA 693
R + + L + + E F + V++ V R +LQ N+ F HVQPCL+C+ K+R L
Sbjct: 580 R*ISITLLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRT 401
Query: 694 AQNSIWMMPEHFQQCFTSSI*LIK*FHT*MVVITLANPSSKCGSFREARKHPMPSI*TRL 873
A + I M+P+ FQ T K H + + L NP+ K F R+ P ++* +
Sbjct: 400 AHDCI*MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKCFWSPRRWPWANM*IQS 221
Query: 874 GGRYSHRHSLHSRNDTTNILTGHCCNAVLKVHLIRELKGDCQHRSQI 1014
Y H + L +TT+ILT H C+ +V LI +L+ + QHRSQI
Sbjct: 220 RRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQI 80
Score = 32.7 bits (65), Expect(2) = 9e-084
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +2
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 5 TLDLASALEVGSTGTRTSGDS 67
Score = 25.4 bits (49), Expect(2) = 6e-036
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 1034 SPEAWGAAEPTSRLDAKSSV 1093
SP+ +PTSR +AKS+V
Sbjct: 63 SPDVLVPVDPTSRAEAKSNV 4
>gb|CV034557.1|CV034557 RTNACL1_10_A06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A06_A029 3', mRNA sequence
Length = 813
Score = 310 bits (672), Expect = 1e-083
Identities = 117/197 (59%), Positives = 161/197 (81%)
Frame = -3 / +3
Query: 975 YEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQ 796
+E HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQ
Sbjct: 18 HEGHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQ 197
Query: 795 SYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVA 616
SY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVA
Sbjct: 198 SYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVA 377
Query: 615 LQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGED 436
LQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++
Sbjct: 378 LQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDE 557
Query: 435 SNIHCLAFCFVNWSFV* 385
+ HC+ F F+NWSF+*
Sbjct: 558 DSTHCIVFMFMNWSFM* 608
Score = 158 bits (339), Expect = 9e-038
Identities = 93/191 (48%), Positives = 103/191 (53%)
Frame = +2 / -3
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 607 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 428
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 427 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 248
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 247 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 68
Query: 926 TY*RAIAATLS 958
TY*RAIAAT S
Sbjct: 67 TY*RAIAATFS 35
>gb|CV034621.1|CV034621 RTNACL1_10_A06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A06_A029 5', mRNA sequence
Length = 731
Score = 308 bits (668), Expect = 4e-083
Identities = 116/194 (59%), Positives = 159/194 (81%)
Frame = -3 / +3
Query: 966 HLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYH 787
HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY
Sbjct: 3 HLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYR 182
Query: 786 YHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQD 607
H+G++L A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD
Sbjct: 183 LHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQD 362
Query: 606 LTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNI 427
++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ +
Sbjct: 363 ISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDST 542
Query: 426 HCLAFCFVNWSFV* 385
HC+ F F+NWSF+*
Sbjct: 543 HCIVFMFMNWSFM* 584
Score = 158 bits (339), Expect = 9e-038
Identities = 93/191 (48%), Positives = 103/191 (53%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 583 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 404
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 403 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 224
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 223 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 44
Query: 926 TY*RAIAATLS 958
TY*RAIAAT S
Sbjct: 43 TY*RAIAATFS 11
>gb|DR056287.1|DR056287 RTCA1_29_F12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_F12_A029 3', mRNA sequence
Length = 782
Score = 303 bits (656), Expect = 2e-081
Identities = 114/192 (59%), Positives = 157/192 (81%)
Frame = -3 / +1
Query: 960 QDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYH 781
+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY H
Sbjct: 1 RENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLH 180
Query: 780 LGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLT 601
+G++L A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++
Sbjct: 181 IGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDIS 360
Query: 600 LDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHC 421
LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + HC
Sbjct: 361 LDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHC 540
Query: 420 LAFCFVNWSFV* 385
+ F F+NWSF+*
Sbjct: 541 IVFMFMNWSFM* 576
Score = 158 bits (339), Expect = 9e-038
Identities = 93/191 (48%), Positives = 103/191 (53%)
Frame = +2 / -1
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 575 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 396
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 395 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 216
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 215 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 36
Query: 926 TY*RAIAATLS 958
TY*RAIAAT S
Sbjct: 35 TY*RAIAATFS 3
>gb|DR742450.1|DR742450 RTCU1_4_D01.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_4_D01_A029 3', mRNA sequence
Length = 702
Score = 302 bits (654), Expect = 3e-081
Identities = 115/193 (59%), Positives = 156/193 (80%)
Frame = -3 / -1
Query: 963 LQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHY 784
L +VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY
Sbjct: 702 LARNVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRL 523
Query: 783 HLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDL 604
H+G++L A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD+
Sbjct: 522 HIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDI 343
Query: 603 TLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIH 424
+LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + H
Sbjct: 342 SLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTH 163
Query: 423 CLAFCFVNWSFV* 385
C+ F F+NWSF+*
Sbjct: 162 CIVFMFMNWSFM* 124
Score = 156 bits (335), Expect = 3e-037
Identities = 92/189 (48%), Positives = 102/189 (53%)
Frame = +2 / +2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 125 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 304
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 305 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 484
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 485 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 664
Query: 926 TY*RAIAAT 952
TY*RAIAAT
Sbjct: 665 TY*RAIAAT 691
>gb|CO368668.1|CO368668 RTK1_42_C01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C01_A029 3', mRNA sequence
Length = 784
Score = 301 bits (652), Expect = 6e-081
Identities = 113/192 (58%), Positives = 156/192 (81%)
Frame = -3 / +2
Query: 960 QDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYH 781
+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY H
Sbjct: 2 RENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLH 181
Query: 780 LGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLT 601
+G++L A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+ VALQD++
Sbjct: 182 IGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTFVALQDIS 361
Query: 600 LDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHC 421
LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + HC
Sbjct: 362 LDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHC 541
Query: 420 LAFCFVNWSFV* 385
+ F F+NWSF+*
Sbjct: 542 IVFMFMNWSFM* 577
Score = 158 bits (339), Expect = 9e-038
Identities = 93/191 (48%), Positives = 103/191 (53%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 576 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 397
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 396 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 217
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 216 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 37
Query: 926 TY*RAIAATLS 958
TY*RAIAAT S
Sbjct: 36 TY*RAIAATFS 4
>gb|CF672241.1|CF672241 RTCNT1_62_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_G02_A029 3', mRNA sequence
Length = 784
Score = 300 bits (650), Expect = 1e-080
Identities = 113/192 (58%), Positives = 156/192 (81%)
Frame = -3 / +2
Query: 960 QDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYH 781
+++VAAMAR YVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY H
Sbjct: 2 RENVAAMARPYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLH 181
Query: 780 LGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLT 601
+G++L A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++
Sbjct: 182 IGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDIS 361
Query: 600 LDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHC 421
LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + HC
Sbjct: 362 LDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHC 541
Query: 420 LAFCFVNWSFV* 385
+ F F+NWSF+*
Sbjct: 542 IVFMFMNWSFM* 577
Score = 155 bits (334), Expect = 4e-037
Identities = 92/191 (48%), Positives = 102/191 (53%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 576 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 397
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 396 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 217
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 216 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 37
Query: 926 TY*RAIAATLS 958
TY RAIAAT S
Sbjct: 36 TYGRAIAATFS 4
>gb|CX713945.1|CX713945 RTPQ1_15_G12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_15_G12_A032 3', mRNA sequence
Length = 774
Score = 299 bits (647), Expect = 3e-080
Identities = 115/188 (61%), Positives = 154/188 (81%)
Frame = -3 / +1
Query: 948 AAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGME 769
AAM RQYVR+VI++VQRV++A++PSQ + G R+ G PEA TL RW+ QSY HLG+E
Sbjct: 1 AAMTRQYVRNVIASVQRVAIALAPSQQSPHIGPRLPPGTPEALTLTRWIFQSYRMHLGLE 180
Query: 768 LLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKI 589
L+ + E++LK+LWHH D ++CCS+K P+FTFAN+AGLDMLET+LVALQD++L+KI
Sbjct: 181 LIGDNSEPNESVLKLLWHHSDGIMCCSWKPLPVFTFANQAGLDMLETTLVALQDISLEKI 360
Query: 588 FDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFC 409
DE+GRK L SD +++M+QGYAYLPSG+C+S MGR VS+D+A+AWKVL ++ IHC+AF
Sbjct: 361 LDENGRKRLCSDFTQIMQQGYAYLPSGICISSMGRPVSYDRAIAWKVLNDEDVIHCIAFM 540
Query: 408 FVNWSFV* 385
F+NWSFV*
Sbjct: 541 FLNWSFV* 564
Score = 118 bits (252), Expect = 9e-026
Identities = 61/119 (51%), Positives = 70/119 (58%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
HTKDQ A Q + SS STFHA A S ET PI +MH P+GR A*PC I SE+S
Sbjct: 563 HTKDQFKNMKAMQ*ITSSSLSTFHAIARSYETGLPILEMHIPEGR*A*PCCIICVKSEHS 384
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNAS 742
P SS I S+ SC AT+ VS++SSPA FANV G +EQH S C FN S
Sbjct: 383 LLRPFSSSIFSNDISCRATKVVSSISSPA*FANVKTGNGFQEQHMIPSEWCHRSFNTDS 207
>gb|DR120678.1|DR120678 RTMG1_31_F04.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_F04_A029 3', mRNA sequence
Length = 782
Score = 294 bits (636), Expect = 9e-079
Identities = 112/180 (62%), Positives = 149/180 (82%)
Frame = -3 / -3
Query: 924 RSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGA 745
R V+++VQRV+MA++PS+ G + G R+ G PEA TLARWVCQSY +HLG+ELL +
Sbjct: 780 RGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEV 601
Query: 744 GEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKA 565
E+LLK LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++L+KI D++GRK+
Sbjct: 600 NESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKS 421
Query: 564 LFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
SDI+++M+QGYAYLP+GVC+S MGR S+D+A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 420 FCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 241
Score = 154 bits (330), Expect = 1e-036
Identities = 86/179 (48%), Positives = 96/179 (53%)
Frame = +2 / +2
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 245 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 424
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPA 748
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 425 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 604
Query: 749 PSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
L +S P+W *L QT A V+ASG P L P P EG A+ TLCT T R
Sbjct: 605 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPR 781
>gb|CO368744.1|CO368744 RTK1_42_C01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C01_A029 5', mRNA sequence
Length = 758
Score = 285 bits (617), Expect = 4e-076
Identities = 106/182 (58%), Positives = 146/182 (80%)
Frame = -3 / +1
Query: 930 YVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSD 751
YVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY H+G++L
Sbjct: 25 YVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADC 204
Query: 750 GAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGR 571
A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+ VALQD++LDKI DE+GR
Sbjct: 205 EASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTFVALQDISLDKILDENGR 384
Query: 570 KALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSF 391
K+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + HC+ F F+NWSF
Sbjct: 385 KSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSF 564
Query: 390 V* 385
+*
Sbjct: 565 M* 570
Score = 143 bits (306), Expect = 3e-033
Identities = 85/182 (46%), Positives = 95/182 (52%)
Frame = +2 / -1
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 569 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 390
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 389 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 210
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 209 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATL*TDATTLR 30
Query: 926 TY 931
TY
Sbjct: 29 TY 24
>gb|CO166187.1|CO166187 FLD1_60_A12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_60_A12_A029 3', mRNA sequence
Length = 751
Score = 284 bits (614), Expect = 1e-075
Identities = 106/181 (58%), Positives = 146/181 (80%)
Frame = -3 / +2
Query: 927 VRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDG 748
VRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY H+G++L
Sbjct: 2 VRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCE 181
Query: 747 AGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRK 568
A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++LDKI DE+GRK
Sbjct: 182 ASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRK 361
Query: 567 ALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV 388
+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + HC+ F F+NWSF+
Sbjct: 362 SFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 541
Query: 387 * 385
*
Sbjct: 542 * 544
Score = 140 bits (301), Expect = 1e-032
Identities = 84/181 (46%), Positives = 94/181 (51%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 543 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 364
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 363 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 184
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLR 925
A + S P W *L Q A V+ASG P L P EG IA+ TL T TLR
Sbjct: 183 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 4
Query: 926 T 928
T
Sbjct: 3 T 1
>gb|BX249925.1|BX249925 BX249925 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP030D04, mRNA sequence
Length = 681
Score = 253 bits (546), Expect(3) = 3e-073
Identities = 101/167 (60%), Positives = 134/167 (80%)
Frame = -3 / +3
Query: 1029 SPDDCNLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGH 850
S + NLRSVLTIAFQF YE H +++VAAMARQYVRSV+++VQRV+MA++PS+ + G
Sbjct: 180 SGTNSNLRSVLTIAFQFTYESHSRENVAAMARQYVRSVVASVQRVAMALAPSRLNSHVGP 359
Query: 849 RMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPM 670
R G PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+
Sbjct: 360 RPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKALPV 539
Query: 669 FTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQG 529
FTFAN+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QG
Sbjct: 540 FTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQG 680
Score = 117 bits (250), Expect(2) = 3e-027
Identities = 75/163 (46%), Positives = 89/163 (54%)
Frame = +2 / -3
Query: 530 PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTAS 709
PC I S P SS+ILS SC+AT VS+MS+PA FANV G + EQH AS
Sbjct: 679 PC*II*P*SVKKLLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNAFTEQHMIAS 500
Query: 710 G*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIA 889
CQS F+ S A + S P *L Q A V+ASG P L P EG A
Sbjct: 499 EWCQSSFSTDSLASQSARNRSTPMCSL*L*QIQRARVSASGVPGGGLGPTCEFSREGANA 320
Query: 890 IDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIVSTDLKLQ 1018
+ TL T TLRTY*RAIAAT S +S N A+V+TDL+ +
Sbjct: 319 MATLWTDATTLRTY*RAIAATFSREWLS*VNWNAMVNTDLRFE 191
Score = 32.7 bits (65), Expect(3) = 3e-073
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 120 TLDLASALEVGSTGTRTSGDS 182
Score = 29.9 bits (59), Expect(3) = 3e-073
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3 / +3
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDG 1108
ID DDAPL+ RVI L+ DG
Sbjct: 21 IDESFADDAPLLPSGFRVIPLESRTDG 101
Score = 25.4 bits (49), Expect(2) = 3e-027
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 1034 SPEAWGAAEPTSRLDAKSSV 1093
SP+ +PTSR +AKS+V
Sbjct: 178 SPDVLVPVDPTSRAEAKSNV 119
>gb|CF672326.1|CF672326 RTCNT1_62_G02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_G02_A029 5', mRNA sequence
Length = 787
Score = 245 bits (529), Expect(3) = 6e-071
Identities = 100/161 (62%), Positives = 128/161 (79%)
Frame = -3 / +1
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 247 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 426
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFAN 655
PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN
Sbjct: 427 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFAN 606
Query: 654 KAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQ 532
+AGLDMLET+LVALQD++LDKI DE+GRK+ + KL +
Sbjct: 607 QAGLDMLETTLVALQDISLDKILDENGRKSFSQIMVKLFNR 729
Score = 126 bits (270), Expect(3) = 2e-032
Identities = 74/148 (50%), Positives = 87/148 (58%)
Frame = +2 / -3
Query: 575 PDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPS 754
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S A
Sbjct: 686 PFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQ 507
Query: 755 D*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY* 934
+ S P W *L Q A V+ASG P L P EG IA+ TL T TLRTY*
Sbjct: 506 SARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY* 327
Query: 935 RAIAATLS*RCISYGN*KAIVSTDLKLQ 1018
RAIAAT S + +S N AIV+TDL+ +
Sbjct: 326 RAIAATFSRKWLS*VNWNAIVNTDLRFE 243
Score = 32.7 bits (65), Expect(3) = 6e-071
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 172 TLDLASALEVGSTGTRTSGDS 234
Score = 29.9 bits (59), Expect(3) = 6e-071
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3 / +1
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDG 1108
ID DDAPL+ RVI L+ DG
Sbjct: 73 IDESFADDAPLLPSGFRVIPLESRTDG 153
Score = 25.8 bits (50), Expect(3) = 2e-032
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -1
Query: 476 ETWRPIPDMHTPDGRYA*PC 535
E PI + H P GR A*PC
Sbjct: 784 EAGLPILERHIPAGR*A*PC 725
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 1034 SPEAWGAAEPTSRLDAKSSV 1093
SP+ +PTSR +AKS+V
Sbjct: 230 SPDVLVPVDPTSRAEAKSNV 171
>gb|CF470504.1|CF470504 RTDS1_13_D09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_D09_A015 3', mRNA sequence
Length = 649
Score = 267 bits (577), Expect = 1e-070
Identities = 101/157 (64%), Positives = 130/157 (82%)
Frame = -3 / +2
Query: 855 GHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEK 676
G R+ G PEA TLARWVCQSY +HLG+ELL + E+LLK LWHH DA++CCS K
Sbjct: 2 GPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSL 181
Query: 675 PMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMS 496
P+FTFAN+AGLDMLET+LVALQD++L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S
Sbjct: 182 PVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVS 361
Query: 495 GMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
MGR S+D+A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 362 SMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 472
Score = 137 bits (294), Expect = 1e-031
Identities = 76/156 (48%), Positives = 85/156 (54%)
Frame = +2 / -2
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 468 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 289
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPA 748
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 288 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 109
Query: 749 PSD*LSNSIPRW***LWQTHLASVAASGKPESILCP 856
L +S P+W *L QT A V+ASG P L P
Sbjct: 108 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGP 1
>gb|BQ634357.1|BQ634357 NXRV067_H08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_H08 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 651
Score = 261 bits (564), Expect = 8e-069
Identities = 98/151 (64%), Positives = 126/151 (83%)
Frame = -3 / +2
Query: 837 GFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFA 658
G P A TLARWVCQSY +HLG+ELL + E+LLK LWHH DA++CCS K P+FTFA
Sbjct: 11 GTPXALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFA 190
Query: 657 NKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHV 478
N+AGLDMLET+LVALQD++L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S MGR
Sbjct: 191 NQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPA 370
Query: 477 SFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
S+D+A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 371 SYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 463
Score = 133 bits (286), Expect = 2e-030
Identities = 73/150 (48%), Positives = 82/150 (54%)
Frame = +2 / -1
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 459 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 280
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPA 748
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 279 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 100
Query: 749 PSD*LSNSIPRW***LWQTHLASVAASGKP 838
L +S P+W *L QT A V+A G P
Sbjct: 99 SELGLRSSTPKWNL*L*QTQRARVSAXGVP 10
>gb|DR013276.1|DR013276 HEAT1_18_G05.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_18_G05_A029 3', mRNA sequence
Length = 678
Score = 255 bits (551), Expect = 5e-067
Identities = 93/159 (58%), Positives = 127/159 (79%)
Frame = -3 / +1
Query: 861 NAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFK 682
+ G R G PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K
Sbjct: 7 HVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVK 186
Query: 681 EKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVC 502
P+FTFAN+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C
Sbjct: 187 SLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGIC 366
Query: 501 MSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
+S MGR S+D+A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 367 LSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 483
Score = 125 bits (267), Expect = 7e-028
Identities = 73/157 (46%), Positives = 82/157 (52%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 482 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 303
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 302 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 123
Query: 746 APSD*LSNSIPRW***LWQTHLASVAASGKPESILCP 856
A + S P W *L Q A V+ASG P L P
Sbjct: 122 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGP 12
>gb|BQ654722.1|BQ654722 NXRV084_G12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV084_G12 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 549
Score = 247 bits (534), Expect = 1e-064
Identities = 104/181 (57%), Positives = 132/181 (72%)
Frame = -3 / +3
Query: 1170 DDAPLIXXXXRVIXLDVXXDGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTI 991
D +PL+ RVI LD DG TLDLASSL++GSA + S D + NLRSVLTI
Sbjct: 6 DSSPLLPSGFRVIPLDSGMDGSSPNRTLDLASSLEIGSAGARTSVDYGGNSGNLRSVLTI 185
Query: 990 AFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLA 811
AFQF +E HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G PEA TLA
Sbjct: 186 AFQFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLA 365
Query: 810 RWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLE 631
RWVCQSY +HLG+ELL + E+LLK LWHH DA++CCS P+FTFAN+AGLDM
Sbjct: 366 RWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLXSLPVFTFANQAGLDMXX 545
Query: 630 T 628
T
Sbjct: 546 T 548
Score = 132 bits (282), Expect = 6e-030
Identities = 78/170 (45%), Positives = 93/170 (54%)
Frame = +2 / -3
Query: 629 VSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTH 808
V NMS PA FA V G KEQH AS CQS+F+ S L +S P+W *L QT
Sbjct: 547 VXNMSRPA*FAKVKTGNXXKEQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQ 368
Query: 809 LASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN*K 988
A V+ASG P L P P EG A+ TLCT T RTY*RA+ AT S + S N K
Sbjct: 367 RARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWK 188
Query: 989 AIVSTDLKLQSSGDASPEAWGAAEPTSRLDAKSSVXPXXTPSXFTSSXMT 1138
AIV+TDL+L S + A+P SR +A+S+V PS S MT
Sbjct: 187 AIVNTDLRLPEFPP*STDVRAPADPISREEARSNVRFGLEPSIPESKGMT 38
>gb|BF221274.1|BF221274 NXCI_156_G07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_156_G07 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 528
Score = 246 bits (532), Expect = 2e-064
Identities = 98/163 (60%), Positives = 129/163 (79%)
Frame = -3 / +2
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 38 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 217
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFAN 655
PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFAN
Sbjct: 218 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFAN 397
Query: 654 KAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGY 526
+A MLET+ ALQD++LDKI DE+GRK+ F+D ++++QGY
Sbjct: 398 QAXXXMLETTXXALQDISLDKILDENGRKSFFTDYGQIIQQGY 526
Score = 121 bits (259), Expect = 9e-027
Identities = 77/165 (46%), Positives = 89/165 (53%)
Frame = +2 / -1
Query: 524 A*PCSISFEMSENSAFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRT 703
A*PC I S P SS+ILS SC+A VS+M A FANV G EQH
Sbjct: 528 A*PC*II*P*SVKKLLRPFSSRILSKDISCNAXXVVSSMXXXA*FANVKTGNDFTEQHMI 349
Query: 704 ASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGD 883
AS CQS F+ S A + S P W *L Q A V+ASG P L P EG
Sbjct: 348 ASEWCQSSFSTDSLASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGA 169
Query: 884 IAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIVSTDLKLQ 1018
IA+ TL T TLRTY*RAIAAT S + +S N AIV+TDL+ +
Sbjct: 168 IAMATLWTDATTLRTY*RAIAATFSRKWLS*VNWNAIVNTDLRFE 34
>gb|BQ696330.1|BQ696330 NXPV_040_B04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_040_B04 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 543
Score = 240 bits (518), Expect = 2e-062
Identities = 101/176 (57%), Positives = 128/176 (72%)
Frame = -3 / +3
Query: 1164 APLIXXXXRVIXLDVXXDGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAF 985
+PL+ RVI LD DG TLDLASSL++GSA + S D + NLRSVLTIAF
Sbjct: 3 SPLLPSGFRVIPLDSGMDGSSPNRTLDLASSLEIGSAGARTSVDYGGNSGNLRSVLTIAF 182
Query: 984 QFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARW 805
QF +E HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G PEA TLARW
Sbjct: 183 QFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARW 362
Query: 804 VCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDM 637
VCQSY +HLG+ELL + E+LLK LWHH DA++CCS K P+FTFAN LDM
Sbjct: 363 VCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANXXXLDM 530
Score = 123 bits (264), Expect = 2e-027
Identities = 74/167 (44%), Positives = 89/167 (53%)
Frame = +2 / -3
Query: 638 MSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLAS 817
MS FA V G KEQH AS CQS+F+ S L +S P+W *L QT A
Sbjct: 529 MSXXXXFAKVKTGNDFKEQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQRAR 350
Query: 818 VAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIV 997
V+ASG P L P P EG A+ TLCT T RTY*RA+ AT S + S N KAIV
Sbjct: 349 VSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWKAIV 170
Query: 998 STDLKLQSSGDASPEAWGAAEPTSRLDAKSSVXPXXTPSXFTSSXMT 1138
+TDL+L S + A+P SR +A+S+V PS S MT
Sbjct: 169 NTDLRLPEFPP*STDVRAPADPISREEARSNVRFGLEPSIPESKGMT 29
>gb|CF470607.1|CF470607 RTDS1_13_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_D09_A015 5', mRNA sequence
Length = 784
Score = 228 bits (493), Expect = 5e-059
Identities = 96/173 (55%), Positives = 123/173 (71%)
Frame = -3 / +3
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNL 1009
ID D +PL+ RVI LD DG TLDLASSL++GSA + S D + NL
Sbjct: 264 IDASLADSSPLLPSGFRVIPLDSGMDGSSPNRTLDLASSLEIGSAGARTSVDYGGNSGNL 443
Query: 1008 RSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFP 829
RSVLTIAFQF +E HL+++VA+MARQYVR V+++VQRV+MA++PS+ G + G R+ G P
Sbjct: 444 RSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTP 623
Query: 828 EAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPM 670
EA TLARWVCQSY +HLG+ELL + E+LLK LWHH DA++CCS K P+
Sbjct: 624 EALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPV 782
Score = 116 bits (249), Expect = 2e-025
Identities = 73/172 (42%), Positives = 88/172 (51%)
Frame = +2 / -1
Query: 674 GFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW***LWQTHLASVAASGKPESILC 853
G KEQH AS CQS+F+ S L +S P+W *L QT A V+ASG P L
Sbjct: 778 GNDFKEQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLG 599
Query: 854 PAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN*KAIVSTDLKLQSSGDA 1033
P P EG A+ TLCT T RTY*RA+ AT S + S N KAIV+TDL+L
Sbjct: 598 PRCEPSREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWKAIVNTDLRLPEFPP* 419
Query: 1034 SPEAWGAAEPTSRLDAKSSVXPXXTPSXFTSSXMTRXXXXINGASSXXXXSI 1189
S + A+P SR +A+S+V PS S MT G S SI
Sbjct: 418 STDVRAPADPISREEARSNVRFGLEPSIPESKGMTLKPEGSKGELSAKDASI 263
>gb|DR090523.1|DR090523 RTAL1_15_D10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_15_D10_A029 5', mRNA sequence
Length = 762
Score = 187 bits (402), Expect(2) = 2e-055
Identities = 74/159 (46%), Positives = 105/159 (66%)
Frame = -3 / +2
Query: 867 GLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCS 688
G G R LSG E L + + SY + GM+LL + E L KM+WHH DA++CC+
Sbjct: 119 GSTLGLRNLSGTTEVLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALICCT 298
Query: 687 FKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSG 508
K P F FAN+A LDMLET+ L DL D+ DE+ +K +SD +K+M+QG+AYLP+G
Sbjct: 299 CKSLPEFIFANEAALDMLETTSGGLHDLRWDQTLDETEKKNAYSDFTKVMQQGFAYLPAG 478
Query: 507 VCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSF 391
+ +S MGR V++++A+AW V ++ + C+AF FVNWSF
Sbjct: 479 IRLSSMGRPVAYERAMAWSVANDNERMPCVAFMFVNWSF 595
Score = 108 bits (231), Expect(2) = 7e-026
Identities = 64/158 (40%), Positives = 81/158 (51%)
Frame = +2 / -1
Query: 395 DQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAFL 574
DQLT A +L S +T HA A S T RPI + P GRYA PC I+ SE + F
Sbjct: 591 DQLTNMKATHGILSLSLATLHAIALS*ATGRPILERRIPAGRYANPCCITLVKSE*AFFF 412
Query: 575 PDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPS 754
SS++ S +RSC VS++S A FAN+N G L QH AS CQ+I ++S
Sbjct: 411 SVSSRV*SHLRSCKPPDVVSSISKAASFANMNSGNDLHVQHIRASEWCQTILKSSSSFEG 232
Query: 755 D*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRP 868
L SIP++ *L S S PE L P+ P
Sbjct: 231 CFLKRSIPKFIL*LPTIRWTSARTSVVPERFLKPSVEP 118
Score = 50.6 bits (104), Expect(2) = 2e-055
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = -3 / +2
Query: 981 FPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISP 877
F YE H DSV+ AR+Y+R+V+++VQRV+MAI+P
Sbjct: 8 FGYETHNCDSVSVAARKYMRTVVASVQRVAMAIAP 112
Score = 29.5 bits (58), Expect(2) = 7e-026
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2 / -1
Query: 878 GDIAIDTLCTAEMTLRTY*RAIAATLS*RCISYGN* 985
G IAI T T T+R Y RA TLS C+S N*
Sbjct: 111 GAIAIATR*TEATTVRMYLRAATDTLSQLCVS*PN* 4
>gb|DR387675.1|DR387675 RTHG1_23_H11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_23_H11_A029 3', mRNA sequence
Length = 760
Score = 204 bits (439), Expect(2) = 5e-055
Identities = 80/135 (59%), Positives = 106/135 (78%)
Frame = -3 / +3
Query: 936 RQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQ 757
RQYVRSV+++VQRV+MAI+PS+ + G R G PEA TLARW+CQSY H+G++L
Sbjct: 3 RQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRA 182
Query: 756 SDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDES 577
A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++LDKI DE+
Sbjct: 183 DCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDEN 362
Query: 576 GRKALFSDISKLMEQ 532
GRK+ F+D +L +
Sbjct: 363 GRKSFFTDYGQLFNR 407
Score = 101 bits (216), Expect(2) = 6e-031
Identities = 60/121 (49%), Positives = 68/121 (56%)
Frame = +2 / -1
Query: 575 PDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPS 754
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S A
Sbjct: 364 PFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQ 185
Query: 755 D*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY* 934
+ S P W *L Q A V+ASG P L P EG IA+ TL T TLRTY*
Sbjct: 184 SARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY* 5
Query: 935 R 937
R
Sbjct: 4 R 2
Score = 94.1 bits (199), Expect(3) = 4e-029
Identities = 31/59 (52%), Positives = 47/59 (79%)
Frame = -3 / +2
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
F + +++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 377 FHRLWSIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 553
Score = 53.3 bits (110), Expect(2) = 6e-031
Identities = 25/50 (50%), Positives = 27/50 (54%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PC 535
H KDQ QW+L SS TF A A S E PI + H P GR A*PC
Sbjct: 552 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC 403
Score = 38.2 bits (77), Expect(3) = 4e-029
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2 / +2
Query: 934 SICS*CHFCCAKSVDGYISLPIWSKCWA*DAFWLP*SCHTC*MGLPELSLPSRYG 770
SIC+*C C + G S CW W S ++C + L EL P R G
Sbjct: 5 SICA*CCSICPEGCHGNSSFSTEFTCWPKATSWDSRSTYSCPLDLSELQTPHRGG 169
Score = 34.5 bits (69), Expect(3) = 4e-029
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -1 / +1
Query: 719 GIIQMLFCAAPLRRNLCLRLQTRQGWTC*K 630
G IQM CA R L L Q +QGWTC K
Sbjct: 220 GTIQMQSCAVL*SRCLFLHSQIKQGWTCWK 309
Score = 31.8 bits (63), Expect(2) = 5e-055
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -2 / +1
Query: 535 TGLRVPAVRRVHVRNGPPCFFRPSCSVEGARRG*QHPLPGVLLRQLVLRVT 383
TGL + + ++ G CF P S+EG+ Q+PL + +LVL VT
Sbjct: 403 TGLCLSTCWDMSLKYGQACFI*PGNSLEGSE*RRQYPLHRFHVYELVLYVT 555
>gb|AI920150.1|AI920150 1680 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
g3_PL2CSUH, mRNA sequence
Length = 680
Score = 195 bits (420), Expect(2) = 7e-055
Identities = 73/110 (66%), Positives = 96/110 (87%)
Frame = -3 / +3
Query: 714 HPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLME 535
H D ++CCS+K P+FTFAN+AGLDMLET+LVALQD++L+KI DE+GRK L SD +++M+
Sbjct: 162 HSDGIMCCSWKPLPVFTFANQAGLDMLETTLVALQDISLEKILDENGRKRLCSDFTQIMQ 341
Query: 534 QGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
QGYAYLPSG+C+S MGR VS+D+A+AWKVL ++ IHC+AF F+NWSFV*
Sbjct: 342 QGYAYLPSGICISSMGRPVSYDRAIAWKVLNDEDVIHCIAFMFLNWSFV* 491
Score = 111 bits (238), Expect = 7e-024
Identities = 57/108 (52%), Positives = 66/108 (61%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
HTKDQ A Q + SS STFHA A S ET PI +MH P+GR A*PC I SE+S
Sbjct: 490 HTKDQFKNMKAMQ*ITSSSLSTFHAIARSYETGLPILEMHIPEGR*A*PCCIICVKSEHS 311
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTAS 709
P SS I S+ SC AT+ VS++SSPA FANV G +EQH S
Sbjct: 310 LLRPFSSSIFSNDISCRATKVVSSISSPA*FANVKTGNGFQEQHMIPS 167
Score = 40.0 bits (81), Expect(2) = 7e-055
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3 / +3
Query: 831 PEAATLARWVCQSYHYHLGMEL 766
P+A TL RW+ QSY HLG+EL
Sbjct: 45 PKALTLTRWIFQSYRMHLGLEL 110
>gb|CO169862.1|CO169862 NDL1_10_D06.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_10_D06_A029 3', mRNA sequence
Length = 544
Score = 213 bits (460), Expect = 2e-054
Identities = 79/119 (66%), Positives = 104/119 (87%)
Frame = -3 / +3
Query: 741 EALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAL 562
E+LLK LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++L+KI D++GRK+
Sbjct: 9 ESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSF 188
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
SDI+++M+QGYAYLP+GVC+S MGR S+D+A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 189 CSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 365
Score = 116 bits (247), Expect = 4e-025
Identities = 60/118 (50%), Positives = 66/118 (55%)
Frame = +2 / -1
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 361 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 182
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNAS 742
P SS I S+ SC ATR VSNMS PA FA V G KEQH AS CQS+F+ S
Sbjct: 181 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDS 8
>gb|BF220484.1|BF220484 NXCI_147_B05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_147_B05 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 462
Score = 207 bits (446), Expect = 1e-052
Identities = 86/141 (60%), Positives = 109/141 (77%)
Frame = -3 / +2
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 38 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 217
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFAN 655
PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K FT AN
Sbjct: 218 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHXDAIMCCSVKXLXXFTXAN 397
Query: 654 KAGLDMLETSLVALQDLTLDK 592
+A L MLET+LVALQD++ K
Sbjct: 398 QAXLXMLETTLVALQDISXXK 460
Score = 105 bits (225), Expect = 5e-022
Identities = 64/137 (46%), Positives = 75/137 (54%)
Frame = +2 / -1
Query: 608 SCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPSD*LSNSIPRW* 787
SC+AT VS+M A FA V EQH AS CQS F+ S A + S P W
Sbjct: 444 SCNATNVVSSMXXXA*FAXVKXXXXFTEQHMIASXWCQSSFSTDSLASQSARNRSTPMWS 265
Query: 788 **LWQTHLASVAASGKPESILCPAFRPDWEGDIAIDTLCTAEMTLRTY*RAIAATLS*RC 967
*L Q A V+ASG P L P EG IA+ TL T TLRTY*RAIAAT S +
Sbjct: 264 L*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY*RAIAATFSRKW 85
Query: 968 ISYGN*KAIVSTDLKLQ 1018
+S N AIV+TDL+ +
Sbjct: 84 LS*VNWNAIVNTDLRFE 34
>gb|AW698003.1|AW698003 NXNV_079_D09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_079_D09 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 394
Score = 206 bits (444), Expect = 3e-052
Identities = 73/121 (60%), Positives = 102/121 (84%)
Frame = -3 / +3
Query: 747 AGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRK 568
A E++LK+LWHH DA++CCS K P+FTFAN+AGLDMLET+LVALQD++LDKI DE+GRK
Sbjct: 24 ASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRK 203
Query: 567 ALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV 388
+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AW L ++ + HC+ F F+NWSF+
Sbjct: 204 SFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWXXLNDEDSTHCIVFMFMNWSFM 383
Query: 387 * 385
*
Sbjct: 384 * 386
Score = 105 bits (224), Expect = 6e-022
Identities = 58/121 (47%), Positives = 65/121 (53%)
Frame = +2 / -1
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ QW+L SS F A A S E PI + H P GR A*PC I S
Sbjct: 385 HIKDQFINMKTMQWVLSSSFRXFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 206
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SS+ILS SC+AT VS+MS+PA FANV G EQH AS CQS F+ S
Sbjct: 205 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 26
Query: 746 A 748
A
Sbjct: 25 A 23
>gb|AA739773.1|AA739773 538 PtIFG2 Pinus taeda cDNA clone 8871M 3', mRNA sequence
Length = 663
Score = 203 bits (437), Expect = 3e-051
Identities = 76/119 (63%), Positives = 100/119 (84%)
Frame = -3 / +2
Query: 741 EALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAL 562
E LK LWHH DA++C S K P+FTF N+AGLDMLET+LVALQD++L+KI D++GRK+
Sbjct: 122 EFXLKTLWHHSDAIMCXSLKSLPVFTFXNQAGLDMLETTLVALQDISLEKILDDNGRKSF 301
Query: 561 FSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
SDI+++M+QGYAYLP+GVC+S MGR S+D+A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 302 CSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 478
Score = 111 bits (236), Expect = 1e-023
Identities = 58/118 (49%), Positives = 64/118 (54%)
Frame = +2 / -1
Query: 389 TKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSA 568
TKDQ NA QW SS TF A A S E P+ + HTP GR A PC I +SE
Sbjct: 474 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 295
Query: 569 FLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNAS 742
P SS I S+ SC ATR VSNMS PA F V G K QH AS CQS+F+ S
Sbjct: 294 LRPLSSSIFSNDISCKATRVVSNMSRPA*FXKVKTGNDFKXQHMMASEWCQSVFSXNS 121
>gb|CO368658.1|CO368658 RTK1_42_B01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_B01_A029 3', mRNA sequence
Length = 558
Score = 203 bits (437), Expect = 3e-051
Identities = 72/121 (59%), Positives = 101/121 (83%)
Frame = -3 / +1
Query: 747 AGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRK 568
A E++LK+LWHH DA++CC K P+FTFAN+AGLDMLET+ VALQD++LDKI DE+GRK
Sbjct: 7 ASESVLKLLWHHSDAIMCCFVKSLPVFTFANQAGLDMLETTFVALQDISLDKILDENGRK 186
Query: 567 ALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV 388
+ F+D ++++QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + C+ F F+NWSF+
Sbjct: 187 SFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTQCIVFMFMNWSFM 366
Query: 387 * 385
*
Sbjct: 367 * 369
Score = 105 bits (223), Expect = 9e-022
Identities = 58/121 (47%), Positives = 65/121 (53%)
Frame = +2 / -2
Query: 386 HTKDQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENS 565
H KDQ W+L SS TF A A S E PI + H P GR A*PC I S
Sbjct: 368 HIKDQFINMKTMHWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 189
Query: 566 AFLPDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASP 745
P SSKILS SC+AT VS+MS+PA FANV G +QH AS CQS F+ S
Sbjct: 188 LLRPFSSKILSKDISCNATNVVSSMSNPA*FANVKTGNDFTKQHMIASEWCQSSFSTDSL 9
Query: 746 A 748
A
Sbjct: 8 A 6
>gb|AW736869.1|AW736869 NXNV_083_H08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_083_H08 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 389
Score = 200 bits (432), Expect = 1e-050
Identities = 73/122 (59%), Positives = 98/122 (80%)
Frame = -3 / +2
Query: 837 GFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFA 658
G PEA TLARW+CQSY H+G++L A E++LK+LWHH DA++CCS K P+FTFA
Sbjct: 17 GTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFA 196
Query: 657 NKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHV 478
N+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+C+S MG
Sbjct: 197 NQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGXXA 376
Query: 477 SF 472
+
Sbjct: 377 XY 382
>gb|CF476401.1|CF476401 RTWW3_1_A12.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_1_A12_A022 3', mRNA sequence
Length = 537
Score = 187 bits (402), Expect = 2e-046
Identities = 67/110 (60%), Positives = 93/110 (84%)
Frame = -3 / +1
Query: 714 HPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLME 535
H DA++CCS K P+FTFAN+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++
Sbjct: 1 HSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQ 180
Query: 534 QGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
QGYAYLP+G+C+S MGR S+D+A+AWKVL ++ + HC+ F F+NWS +*
Sbjct: 181 QGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFRFMNWSLM* 330
>gb|DR168719.1|DR168719 RTPHOS1_27_H08.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_27_H08_A029 3', mRNA sequence
Length = 713
Score = 187 bits (402), Expect = 2e-046
Identities = 74/159 (46%), Positives = 105/159 (66%)
Frame = -3 / +1
Query: 867 GLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCS 688
G G R LSG E L + + SY + GM+LL + E L KM+WHH DA++CC+
Sbjct: 37 GSTLGLRNLSGTTEVLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALICCT 216
Query: 687 FKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSG 508
K P F FAN+A LDMLET+ L DL D+ DE+ +K +SD +K+M+QG+AYLP+G
Sbjct: 217 CKSLPEFIFANEAALDMLETTSGGLHDLRWDQTLDETEKKNAYSDFTKVMQQGFAYLPAG 396
Query: 507 VCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSF 391
+ +S MGR V++++A+AW V ++ + C+AF FVNWSF
Sbjct: 397 IRLSSMGRPVAYERAMAWSVANDNERMPCVAFMFVNWSF 513
Score = 108 bits (231), Expect = 7e-023
Identities = 64/158 (40%), Positives = 81/158 (51%)
Frame = +2 / -1
Query: 395 DQLTKQNARQWMLLSSPSTFHATAWSKETWRPIPDMHTPDGRYA*PCSISFEMSENSAFL 574
DQLT A +L S +T HA A S T RPI + P GRYA PC I+ SE + F
Sbjct: 509 DQLTNMKATHGILSLSLATLHAIALS*ATGRPILERRIPAGRYANPCCITLVKSE*AFFF 330
Query: 575 PDSSKILSSVRSCSATRDVSNMSSPALFANVNIGFSLKEQHRTASG*CQSIFNNASPAPS 754
SS++ S +RSC VS++S A FAN+N G L QH AS CQ+I ++S
Sbjct: 329 SVSSRV*SHLRSCKPPDVVSSISKAASFANMNSGNDLHVQHIRASEWCQTILKSSSSFEG 150
Query: 755 D*LSNSIPRW***LWQTHLASVAASGKPESILCPAFRP 868
L SIP++ *L S S PE L P+ P
Sbjct: 149 CFLKRSIPKFIL*LPTIRWTSARTSVVPERFLKPSVEP 36
>gb|CO165410.1|CO165410 FLD1_54_H04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H04_A029 3', mRNA sequence
Length = 840
Score = 155 bits (333), Expect(3) = 3e-044
Identities = 63/101 (62%), Positives = 80/101 (79%)
Frame = -3 / -1
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 303 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 124
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHH 712
PEA TLARW+CQSY H+G++L A E++LK+LWHH
Sbjct: 123 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHH 1
Score = 32.7 bits (65), Expect(3) = 3e-044
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 378 TLDLASALEVGSTGTRTSGDS 316
Score = 29.9 bits (59), Expect(3) = 3e-044
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3 / -1
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDG 1108
ID DDAPL+ RVI L+ DG
Sbjct: 477 IDESFADDAPLLPSGFRVIPLESRTDG 397
>gb|BE810198.1|BE810198 NXCI_061_C04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_061_C04 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 372
Score = 171 bits (367), Expect = 1e-041
Identities = 66/123 (53%), Positives = 90/123 (73%)
Frame = -3 / +3
Query: 885 ISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPD 706
I+PS+ + G R G PEA TLARW+CQSY H+G++L A E++LK+LWHH D
Sbjct: 3 IAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSD 182
Query: 705 AVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGY 526
A++CCS K P+FTFAN+A LDMLET+LVALQD++ DKI D + RK+ F+D ++++ Y
Sbjct: 183 AIMCCSVKSLPVFTFANQAXLDMLETTLVALQDISXDKILDXNXRKSFFTDYGQIIQXXY 362
Query: 525 AYL 517
AYL
Sbjct: 363 AYL 371
>gb|CF393740.1|CF393740 RTDS2_1_A05.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_A05_A021 3', mRNA sequence
Length = 573
Score = 169 bits (363), Expect = 4e-041
Identities = 62/100 (62%), Positives = 85/100 (85%)
Frame = -3 / +2
Query: 684 KEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGV 505
K P+FTFAN+AGLDMLET+LVALQD++LDKI DE+GRK+ F+D ++++QGYAYLP+G+
Sbjct: 2 KSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGI 181
Query: 504 CMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
C+S MGR S D+A+AWKVL ++ + HC+ F F+NWSF+*
Sbjct: 182 CLSSMGRPASHDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 301
>gb|CF393839.1|CF393839 RTDS2_1_A05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_A05_A021 5', mRNA sequence
Length = 806
Score = 151 bits (325), Expect(3) = 2e-040
Identities = 62/100 (62%), Positives = 79/100 (79%)
Frame = -3 / +2
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLRSVLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 491 NLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 670
Query: 834 FPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWH 715
PEA TLARW+CQSY H+G++L A E++LK+LWH
Sbjct: 671 TPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWH 790
Score = 32.7 bits (65), Expect(3) = 2e-040
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +2
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 416 TLDLASALEVGSTGTRTSGDS 478
Score = 25.8 bits (50), Expect(3) = 2e-040
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / +2
Query: 1188 IDXXXXDDAPLIXXXXRVIXLD 1123
ID DDAPL+ RVI L+
Sbjct: 176 IDESFADDAPLLPSGFRVIPLE 241
>gb|BE496570.1|BE496570 NXCI_020_G05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_020_G05 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 461
Score = 164 bits (352), Expect = 1e-039
Identities = 62/94 (65%), Positives = 82/94 (87%)
Frame = -3 / +3
Query: 666 TFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMG 487
TFAN GLDMLET+LVALQD++L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S MG
Sbjct: 3 TFANXXGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMG 182
Query: 486 RHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV* 385
R S+D+A+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 183 RPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 284
>gb|BE520016.1|BE520016 NXCI_028_B08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_028_B08 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 348
Score = 160 bits (343), Expect = 2e-038
Identities = 63/110 (57%), Positives = 83/110 (75%)
Frame = -3 / +3
Query: 885 ISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPD 706
I+PS+ + G R G PEA TLARW+CQSY H+G++L A E++LK+LWHH D
Sbjct: 3 IAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSD 182
Query: 705 AVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFS 556
A++C S K P+FTFAN+AGLDMLET+LVALQD++LDKI DE+ RK+ F+
Sbjct: 183 AIMCXSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENXRKSFFT 332
>gb|CF476510.1|CF476510 RTWW3_1_A12.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_1_A12_A022 5', mRNA sequence
Length = 468
Score = 131 bits (280), Expect(3) = 5e-037
Identities = 54/83 (65%), Positives = 68/83 (81%)
Frame = -3 / +3
Query: 1014 NLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSG 835
NLR VLTIAFQF YE HL+++VAAMARQYVRSV+++VQRV+MAI+PS+ + G R G
Sbjct: 201 NLRYVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPG 380
Query: 834 FPEAATLARWVCQSYHYHLGMEL 766
PEA TLARW+CQSY H+G++L
Sbjct: 381 TPEALTLARWICQSYRLHIGVDL 449
Score = 32.7 bits (65), Expect(3) = 5e-037
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 1092 TLDLASSLDVGSAAPQASGDA 1030
TLDLAS+L+VGS + SGD+
Sbjct: 126 TLDLASALEVGSTGTRTSGDS 188
Score = 29.9 bits (59), Expect(3) = 5e-037
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3 / +3
Query: 1188 IDXXXXDDAPLIXXXXRVIXLDVXXDG 1108
ID DDAPL+ RVI L+ DG
Sbjct: 27 IDESFADDAPLLPSGFRVIPLESRTDG 107
>gb|DR168796.1|DR168796 RTPHOS1_27_H08.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_27_H08_A029 5', mRNA sequence
Length = 617
Score = 90.0 bits (190), Expect(3) = 9e-035
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = -3 / +3
Query: 1113 DGVXXGXTLDLASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVAAMAR 934
DG TLDLAS L+ GS A + NLRS++TIAFQF YE H DSV+ AR
Sbjct: 159 DGYGLSCTLDLASMLEGGSDMDAAKTETGISSKNLRSIVTIAFQFGYETHNCDSVSVAAR 338
Query: 933 QYVRSVISAVQRVSMAISP 877
+Y+R+V+++VQRV+MAI+P
Sbjct: 339 KYMRTVVASVQRVAMAIAP 395
Score = 71.2 bits (149), Expect(3) = 9e-035
Identities = 29/69 (42%), Positives = 38/69 (55%)
Frame = -3 / +3
Query: 867 GLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCS 688
G G R LSG E L + + SY + GM+LL + E L KM+WHH DA++CC+
Sbjct: 402 GSTLGLRNLSGTTEVLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALICCT 581
Query: 687 FKEKPMFTF 661
K P F F
Sbjct: 582 CKSLPEFIF 608
Score = 24.9 bits (48), Expect(3) = 9e-035
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3 / +3
Query: 1188 IDXXXXDDAPLIXXXXRVIXLD 1123
+D DD PL+ RVI LD
Sbjct: 81 VDGALSDDIPLLPSGFRVIPLD 146
>gb|CO361058.1|CO361058 NDL2_2_H09.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_2_H09_A029 3', mRNA sequence
Length = 764
Score = 147 bits (316), Expect = 1e-034
Identities = 55/86 (63%), Positives = 75/86 (87%)
Frame = -3 / +1
Query: 642 DMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQA 463
DMLET+LVAL D++L+KI D++GRK+ SDI+++M+QGYAYLP+GVC+S MGR S+D+A
Sbjct: 1 DMLETTLVALPDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRA 180
Query: 462 VAWKVLGEDSNIHCLAFCFVNWSFV* 385
+AWKVL ++ N HC+AF F+NWSFV*
Sbjct: 181 IAWKVLNDEENPHCIAFTFMNWSFV* 258
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 694,836,691
Number of Sequences: 355925
Number of extensions: 11124271
Number of successful extensions: 70480
Number of sequences better than 1.0e-020: 85
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 18371669960
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)