TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441110.2.1
(643 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF394711.1|CF394711 RTDS2_7_F10.b1_A021 Drought-stressed... 182 1e-045
gb|CF476981.1|CF476981 RTWW3_5_F05.b1_A022 Well-watered lob... 182 1e-045
gb|CX647889.1|CX647889 COLD1_25_D11.b1_A029 Root cold Pinus... 182 1e-045
gb|CX652773.1|CX652773 COLD1_61_H07.b1_A029 Root cold Pinus... 182 1e-045
gb|DR020066.1|DR020066 STRS1_34_A01.g1_A034 Shoot tip pitch... 182 1e-045
gb|DR047742.1|DR047742 RTBOR1_3_E01.b1_A029 Roots plus adde... 182 1e-045
gb|DR053270.1|DR053270 RTCA1_10_B11.b1_A029 Roots minus cal... 182 1e-045
gb|DR057516.1|DR057516 RTNIT1_6_F07.b1_A029 Roots minus nit... 182 1e-045
gb|DR057604.1|DR057604 RTNIT1_6_F07.g1_A029 Roots minus nit... 182 1e-045
gb|DR178525.1|DR178525 RTMNUT1_12_G11.b1_A029 Roots minus m... 182 1e-045
gb|DR178613.1|DR178613 RTMNUT1_12_G11.g1_A029 Roots minus m... 182 1e-045
gb|BF777684.1|BF777684 NXSI_073_G02_F NXSI (Nsf Xylem Side ... 181 4e-045
gb|CO161486.1|CO161486 FLD1_29_D12.b1_A029 Root flooded Pin... 181 4e-045
gb|CO161559.1|CO161559 FLD1_29_D12.g1_A029 Root flooded Pin... 181 4e-045
gb|CO165913.1|CO165913 FLD1_58_C02.b1_A029 Root flooded Pin... 181 4e-045
gb|CO368334.1|CO368334 RTK1_40_B07.b1_A029 Roots minus pota... 181 4e-045
gb|CO368414.1|CO368414 RTK1_40_B07.g1_A029 Roots minus pota... 181 4e-045
gb|DR080318.1|DR080318 RTFEPL1_21_H01.g1_A029 Roots plus ad... 181 4e-045
gb|DR161131.1|DR161131 RTFE1_10_B09.b1_A029 Roots minus iro... 181 4e-045
gb|DR161213.1|DR161213 RTFE1_10_B09.g1_A029 Roots minus iro... 181 4e-045
gb|DR694280.1|DR694280 EST1084371 Normalized pine embryo li... 181 4e-045
gb|DT638813.1|DT638813 EST1153744 Normalized pine embryo li... 181 4e-045
gb|CF477106.1|CF477106 RTWW3_5_F05.g1_A022 Well-watered lob... 180 1e-044
gb|CO157997.1|CO157997 FLD1_3_F02.g1_A029 Root flooded Pinu... 180 1e-044
gb|DR080245.1|DR080245 RTFEPL1_21_H01.b1_A029 Roots plus ad... 179 1e-044
gb|CF478002.1|CF478002 RTWW3_17_D11.b1_A022 Well-watered lo... 179 2e-044
gb|DR119725.1|DR119725 RTMG1_25_C09.b1_A029 Roots minus mag... 179 2e-044
gb|DR120183.1|DR120183 RTMG1_28_C03.b1_A029 Roots minus mag... 179 2e-044
gb|DR180801.1|DR180801 RTMNUT1_35_A02.b1_A029 Roots minus m... 179 2e-044
gb|DR746018.1|DR746018 RTCU1_34_D10.b1_A029 Roots plus adde... 179 2e-044
gb|DR161961.1|DR161961 RTFE1_15_A01.b1_A029 Roots minus iro... 178 3e-044
gb|CO167745.1|CO167745 FLD1_70_H06.g1_A029 Root flooded Pin... 173 8e-043
gb|CF478051.1|CF478051 RTWW3_17_D11.g1_A022 Well-watered lo... 172 2e-042
gb|CX652851.1|CX652851 COLD1_61_H07.g1_A029 Root cold Pinus... 171 6e-042
gb|CX646614.1|CX646614 COLD1_10_A03.g1_A029 Root cold Pinus... 164 5e-040
gb|DR746091.1|DR746091 RTCU1_34_D10.g1_A029 Roots plus adde... 111 5e-040
gb|CF392716.1|CF392716 RTDR3_5_C08.g1_A022 Loblolly pine ro... 156 1e-037
gb|DR019998.1|DR019998 STRS1_34_A01.b1_A034 Shoot tip pitch... 153 1e-036
gb|DR683803.1|DR683803 EST1073879 Normalized pine embryo li... 153 1e-036
gb|DR688962.1|DR688962 EST1079048 Normalized pine embryo li... 153 1e-036
gb|CF395475.1|CF395475 RTDS2_11_F03.g1_A021 Drought-stresse... 148 3e-035
gb|DR120259.1|DR120259 RTMG1_28_C03.g2_A029 Roots minus mag... 137 7e-032
gb|DT631650.1|DT631650 EST1146581 Normalized pine embryo li... 121 4e-027
gb|DT635043.1|DT635043 EST1149974 Normalized pine embryo li... 103 7e-027
gb|DR119795.1|DR119795 RTMG1_25_C09.g2_A029 Roots minus mag... 120 1e-026
gb|DR683411.1|DR683411 EST1073487 Normalized pine embryo li... 109 2e-023
gb|CX653144.1|CX653144 COLD1_63_E02.g1_A029 Root cold Pinus... 62 2e-023
gb|CX653063.1|CX653063 COLD1_63_E02.b1_A029 Root cold Pinus... 62 2e-023
>gb|CF394711.1|CF394711 RTDS2_7_F10.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_7_F10_A021 3', mRNA sequence
Length = 763
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 284 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 463
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 464 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 631
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 630 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 451
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 450 GISILFPKIKKGTFVKESSESKASSSFFASAN 355
>gb|CF476981.1|CF476981 RTWW3_5_F05.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_5_F05_A022 3', mRNA sequence
Length = 757
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 18 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 197
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 198 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 365
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 364 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 185
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 184 GISILFPKIKKGTFVKESSESKASSSFFASAN 89
>gb|CX647889.1|CX647889 COLD1_25_D11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_25_D11_A029 3', mRNA sequence
Length = 799
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 186 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 365
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 366 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 533
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 532 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 353
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 352 GISILFPKIKKGTFVKESSESKASSSFFASAN 257
>gb|CX652773.1|CX652773 COLD1_61_H07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_61_H07_A029 3', mRNA sequence
Length = 638
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 25 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 204
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 205 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 372
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 371 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 192
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 191 GISILFPKIKKGTFVKESSESKASSSFFASAN 96
>gb|DR020066.1|DR020066 STRS1_34_A01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_34_A01_A034 5', mRNA sequence
Length = 798
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / -2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 524 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 345
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 344 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 177
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / +1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 178 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 357
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 358 GISILFPKIKKGTFVKESSESKASSSFFASAN 453
>gb|DR047742.1|DR047742 RTBOR1_3_E01.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_3_E01_A029 3', mRNA sequence
Length = 665
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 51 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 230
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 231 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 398
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 397 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 218
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 217 GISILFPKIKKGTFVKESSESKASSSFFASAN 122
>gb|DR053270.1|DR053270 RTCA1_10_B11.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_10_B11_A029 3', mRNA sequence
Length = 745
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 21 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 200
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 201 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 368
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 367 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 188
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 187 GISILFPKIKKGTFVKESSESKASSSFFASAN 92
>gb|DR057516.1|DR057516 RTNIT1_6_F07.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_F07_A029 3', mRNA sequence
Length = 857
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 212 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 391
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 392 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 559
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 558 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 379
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 378 GISILFPKIKKGTFVKESSESKASSSFFASAN 283
>gb|DR057604.1|DR057604 RTNIT1_6_F07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_F07_A029 5', mRNA sequence
Length = 903
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 427 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 606
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 607 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 774
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 773 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 594
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 593 GISILFPKIKKGTFVKESSESKASSSFFASAN 498
>gb|DR178525.1|DR178525 RTMNUT1_12_G11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_12_G11_A029 3', mRNA sequence
Length = 757
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 28 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 207
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 208 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 375
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 374 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 195
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 194 GISILFPKIKKGTFVKESSESKASSSFFASAN 99
>gb|DR178613.1|DR178613 RTMNUT1_12_G11.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_12_G11_A029 5', mRNA sequence
Length = 744
Score = 182 bits (393), Expect = 1e-045
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 226 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 405
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 406 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 573
Score = 112 bits (240), Expect = 2e-024
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +3 / -2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAY
Sbjct: 572 YLMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAY 393
Query: 477 GISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
GISIL P+++ GTF KE N
Sbjct: 392 GISILFPKIKKGTFVKESSESKASSSFFASAN 297
>gb|BF777684.1|BF777684 NXSI_073_G02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_073_G02 5' similar to Arabidopsis thaliana
sequence At4g02080 SAR1/GTP-binding secretory factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 507
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 31 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 210
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 211 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 378
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 377 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 198
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 197 GISILFPRIRKGTFVNE 147
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -1
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 84 IHEVYNSIHLGIIIFPD 34
>gb|CO161486.1|CO161486 FLD1_29_D12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_29_D12_A029 3', mRNA sequence
Length = 850
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 126 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 305
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 306 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 473
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 472 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 293
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 292 GISILFPRIRKGTFVNE 242
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 179 IHEVYNSIHLGIIIFPD 129
>gb|CO161559.1|CO161559 FLD1_29_D12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_29_D12_A029 5', mRNA sequence
Length = 817
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 211 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 390
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 391 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 558
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 557 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 378
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 377 GISILFPRIRKGTFVNE 327
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 264 IHEVYNSIHLGIIIFPD 214
>gb|CO165913.1|CO165913 FLD1_58_C02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_58_C02_A029 3', mRNA sequence
Length = 859
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / -3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 470 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 291
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 290 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 123
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / +1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 124 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 303
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 304 GISILFPRIRKGTFVNE 354
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 417 IHEVYNSIHLGIIIFPD 467
>gb|CO368334.1|CO368334 RTK1_40_B07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_B07_A029 3', mRNA sequence
Length = 817
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 136 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 315
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 316 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 483
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 482 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 303
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 302 GISILFPRIRKGTFVNE 252
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 189 IHEVYNSIHLGIIIFPD 139
>gb|CO368414.1|CO368414 RTK1_40_B07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_B07_A029 5', mRNA sequence
Length = 851
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 412 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 591
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 592 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 759
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 758 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 579
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 578 GISILFPRIRKGTFVNE 528
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 465 IHEVYNSIHLGIIIFPD 415
>gb|DR080318.1|DR080318 RTFEPL1_21_H01.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_H01_A029 5', mRNA sequence
Length = 786
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / -1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 588 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 409
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 408 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 241
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / +2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 242 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 421
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 422 GISILFPRIRKGTFVNE 472
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 535 IHEVYNSIHLGIIIFPD 585
>gb|DR161131.1|DR161131 RTFE1_10_B09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_B09_A029 3', mRNA sequence
Length = 816
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 239 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 418
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 419 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 586
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 585 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 406
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 405 GISILFPRIRKGTFVNE 355
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 292 IHEVYNSIHLGIIIFPD 242
>gb|DR161213.1|DR161213 RTFE1_10_B09.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_B09_A029 5', mRNA sequence
Length = 820
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 411 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 590
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 591 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 758
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 757 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 578
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 577 GISILFPRIRKGTFVNE 527
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 464 IHEVYNSIHLGIIIFPD 414
>gb|DR694280.1|DR694280 EST1084371 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEA37 3' end, mRNA sequence
Length = 881
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 425 RVWKDYYAKVDAVIYLVDATDKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 604
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 605 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 772
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 771 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 592
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 591 GISILFPRIRKGTFVNE 541
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 478 IHEVYNSIHLGIIIFPD 428
>gb|DT638813.1|DT638813 EST1153744 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHJ75 3' end, mRNA sequence
Length = 850
Score = 181 bits (390), Expect = 4e-045
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 433 RVWKDYYAKVDAVIYLVDATDKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 612
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 613 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 780
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 779 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 600
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 599 GISILFPRIRKGTFVNE 549
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 486 IHEVYNSIHLGIIIFPD 436
>gb|CF477106.1|CF477106 RTWW3_5_F05.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_5_F05_A022 5', mRNA sequence
Length = 729
Score = 180 bits (387), Expect = 1e-044
Identities = 75/114 (65%), Positives = 83/114 (72%)
Frame = -1 / +2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 386 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 565
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 302
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYI
Sbjct: 566 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWLSQYI 727
Score = 109 bits (233), Expect = 2e-023
Identities = 50/91 (54%), Positives = 56/91 (61%)
Frame = +3 / -1
Query: 300 LMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAYG 479
LMY E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAYG
Sbjct: 729 LMY*ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAYG 550
Query: 480 ISILLPRMRNGTFAKEXXXXXXXXXXXXXXN 572
ISIL P+++ GTF KE N
Sbjct: 549 ISILFPKIKKGTFVKESSESKASSSFFASAN 457
>gb|CO157997.1|CO157997 FLD1_3_F02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_3_F02_A029 5', mRNA sequence
Length = 726
Score = 180 bits (387), Expect = 1e-044
Identities = 75/116 (64%), Positives = 85/116 (73%)
Frame = -1 / -3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 691 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 512
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYI+*
Sbjct: 511 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIR* 344
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / +3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 345 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 524
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 525 GISILFPRIRKGTFVNE 575
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 638 IHEVYNSIHLGIIIFPD 688
>gb|DR080245.1|DR080245 RTFEPL1_21_H01.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_H01_A029 3', mRNA sequence
Length = 801
Score = 179 bits (386), Expect = 1e-044
Identities = 75/116 (64%), Positives = 85/116 (73%)
Frame = -1 / -2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 401 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 222
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQ+IK*
Sbjct: 221 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQFIK* 54
Score = 111 bits (238), Expect(2) = 4e-026
Identities = 49/77 (63%), Positives = 55/77 (71%)
Frame = +3 / +1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLM W++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 55 YLMNWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 234
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 235 GISILFPRIRKGTFVNE 285
Score = 25.8 bits (50), Expect(2) = 4e-026
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 348 IHEVYNSIHLGIIIFPD 398
>gb|CF478002.1|CF478002 RTWW3_17_D11.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_17_D11_A022 3', mRNA sequence
Length = 597
Score = 179 bits (385), Expect = 2e-044
Identities = 72/94 (76%), Positives = 81/94 (86%)
Frame = -1 / +2
Query: 577 ERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 398
ERFAE++KE NVPFLILGNKIDIPYAASEEELRY+LGL+N+TTGKGKVNL
Sbjct: 59 ERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAASEEELRYYLGLANYTTGKGKVNL 238
Query: 397 GDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 239 SDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 340
Score = 116 bits (247), Expect = 2e-025
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 339 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 160
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 159 GISILFPRIRKGTFVNE 109
>gb|DR119725.1|DR119725 RTMG1_25_C09.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_25_C09_A029 3', mRNA sequence
Length = 676
Score = 179 bits (385), Expect = 2e-044
Identities = 72/94 (76%), Positives = 81/94 (86%)
Frame = -1 / +3
Query: 577 ERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 398
ERFAE++KE NVPFLILGNKIDIPYAASEEELRY+LGL+N+TTGKGKVNL
Sbjct: 36 ERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAASEEELRYYLGLANYTTGKGKVNL 215
Query: 397 GDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 216 SDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 317
Score = 116 bits (247), Expect = 2e-025
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 316 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 137
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 136 GISILFPRIRKGTFVNE 86
>gb|DR120183.1|DR120183 RTMG1_28_C03.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_C03_A029 3', mRNA sequence
Length = 552
Score = 179 bits (385), Expect = 2e-044
Identities = 72/94 (76%), Positives = 81/94 (86%)
Frame = -1 / +3
Query: 577 ERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 398
ERFAE++KE NVPFLILGNKIDIPYAASEEELRY+LGL+N+TTGKGKVNL
Sbjct: 12 ERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAASEEELRYYLGLANYTTGKGKVNL 191
Query: 397 GDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 192 SDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 293
Score = 116 bits (247), Expect = 2e-025
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 292 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 113
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 112 GISILFPRIRKGTFVNE 62
>gb|DR180801.1|DR180801 RTMNUT1_35_A02.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_35_A02_A029 3', mRNA sequence
Length = 687
Score = 179 bits (385), Expect = 2e-044
Identities = 72/94 (76%), Positives = 81/94 (86%)
Frame = -1 / +1
Query: 577 ERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 398
ERFAE++KE NVPFLILGNKIDIPYAASEEELRY+LGL+N+TTGKGKVNL
Sbjct: 46 ERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAASEEELRYYLGLANYTTGKGKVNL 225
Query: 397 GDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 226 SDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 327
Score = 116 bits (247), Expect = 2e-025
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 326 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 147
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 146 GISILFPRIRKGTFVNE 96
>gb|DR746018.1|DR746018 RTCU1_34_D10.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_34_D10_A029 3', mRNA sequence
Length = 687
Score = 179 bits (385), Expect = 2e-044
Identities = 72/94 (76%), Positives = 81/94 (86%)
Frame = -1 / +1
Query: 577 ERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 398
ERFAE++KE NVPFLILGNKIDIPYAASEEELRY+LGL+N+TTGKGKVNL
Sbjct: 46 ERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAASEEELRYYLGLANYTTGKGKVNL 225
Query: 397 GDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 226 SDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 327
Score = 116 bits (247), Expect = 2e-025
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = +3 / -2
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA
Sbjct: 326 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA* 147
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 146 GISILFPRIRKGTFVNE 96
>gb|DR161961.1|DR161961 RTFE1_15_A01.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_15_A01_A029 3', mRNA sequence
Length = 598
Score = 178 bits (384), Expect = 3e-044
Identities = 75/116 (64%), Positives = 84/116 (72%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAA
Sbjct: 7 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAL 186
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 187 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 354
Score = 115 bits (245), Expect(2) = 5e-027
Identities = 50/77 (64%), Positives = 55/77 (71%)
Frame = +3 / -3
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAY 476
YLMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R AA
Sbjct: 353 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSNAA* 174
Query: 477 GISILLPRMRNGTFAKE 527
GISIL PR+R GTF E
Sbjct: 173 GISILFPRIRKGTFVNE 123
Score = 25.8 bits (50), Expect(2) = 5e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 60 IHEVYNSIHLGIIIFPD 10
>gb|CO167745.1|CO167745 FLD1_70_H06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_H06_A029 5', mRNA sequence
Length = 718
Score = 173 bits (373), Expect = 8e-043
Identities = 72/112 (64%), Positives = 81/112 (72%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 381 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 560
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQ 308
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+SQ
Sbjct: 561 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMCSIVRKMGYGEGIKWLSQ 716
Score = 106 bits (226), Expect(2) = 2e-024
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +3 / -1
Query: 306 YWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAYGIS 485
+W++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA GIS
Sbjct: 718 HWDSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*FARPR**RSSSSDAA*GIS 539
Query: 486 ILLPRMRNGTFAKE 527
IL PR+R GTF E
Sbjct: 538 ILFPRIRKGTFVNE 497
Score = 25.8 bits (50), Expect(2) = 2e-024
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 434 IHEVYNSIHLGIIIFPD 384
>gb|CF478051.1|CF478051 RTWW3_17_D11.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_17_D11_A022 5', mRNA sequence
Length = 730
Score = 172 bits (371), Expect = 2e-042
Identities = 72/114 (63%), Positives = 81/114 (71%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 387 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 566
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 302
EEELRY+L L+N+TTGKGKVNL DSNVRP+EVFMCS+VR MGYG+G KW+SQYI
Sbjct: 567 EEELRYYLXLANYTTGKGKVNLSDSNVRPIEVFMCSIVRXMGYGEGIKWLSQYI 728
Score = 108 bits (230), Expect(2) = 6e-025
Identities = 48/76 (63%), Positives = 54/76 (71%)
Frame = +3 / -1
Query: 300 LMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAYG 479
LMYW++HL PSP PI RT LH+ TS GRTLES +LTLP PVV R R* R +AA G
Sbjct: 730 LMYWDSHLIPSPYPIXRTILHINTSIGRTLESDKLTLPLPVV*FARXR**RSSSSDAA*G 551
Query: 480 ISILLPRMRNGTFAKE 527
ISIL PR+R GTF E
Sbjct: 550 ISILFPRIRKGTFVNE 503
Score = 25.8 bits (50), Expect(2) = 6e-025
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 440 IHEVYNSIHLGIIIFPD 390
>gb|CX652851.1|CX652851 COLD1_61_H07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_61_H07_A029 5', mRNA sequence
Length = 776
Score = 171 bits (367), Expect = 6e-042
Identities = 71/110 (64%), Positives = 79/110 (71%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 445 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 624
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWV 314
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGYG+G KW+
Sbjct: 625 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGYGEGIKWL 774
Score = 104 bits (221), Expect = 8e-022
Identities = 47/87 (54%), Positives = 53/87 (60%)
Frame = +3 / -1
Query: 312 ETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAYGISIL 491
E+HL PSP*PI T LHMKTS G TLES + TLP PVV RPR* R +AAYGISIL
Sbjct: 776 ESHLIPSP*PIFLTILHMKTSIGLTLESAKFTLPLPVV*FDRPR**RSSSSDAAYGISIL 597
Query: 492 LPRMRNGTFAKEXXXXXXXXXXXXXXN 572
P+++ GTF KE N
Sbjct: 596 FPKIKKGTFVKESSESKASSSFFASAN 516
>gb|CX646614.1|CX646614 COLD1_10_A03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_A03_A029 5', mRNA sequence
Length = 701
Score = 164 bits (353), Expect = 5e-040
Identities = 68/111 (61%), Positives = 79/111 (71%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFA+++KE NVPFLILGNKIDIPYAAS
Sbjct: 369 RVWKDYYAKEDAVIYLVDAADKERFAQARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 548
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGYGDGFKWVS 311
EEELRY+LGL+++TTGKGKVNL DSNVRP+EVFMCS+V KMGYG+G KW+S
Sbjct: 549 EEELRYYLGLADYTTGKGKVNLSDSNVRPIEVFMCSIVLKMGYGEGIKWLS 701
Score = 99.6 bits (211), Expect(2) = 7e-022
Identities = 45/72 (62%), Positives = 51/72 (70%)
Frame = +3 / -2
Query: 312 ETHLKPSP*PILRTTLHMKTSSGRTLESPRLTLPFPVVKLLRPR*YRXXXXEAAYGISIL 491
++HL PSP PI RT LH+ TS GRTLES +LTLP PVV RPR* R +AA GISIL
Sbjct: 700 DSHLIPSPYPIFRTILHINTSIGRTLESDKLTLPLPVV*SARPR**RSSSSDAA*GISIL 521
Query: 492 LPRMRNGTFAKE 527
PR+R GTF E
Sbjct: 520 FPRIRKGTFVNE 485
Score = 24.0 bits (46), Expect(2) = 7e-022
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2 / -1
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI L ++I PD
Sbjct: 422 IHEVYNSILLGIIIFPD 372
>gb|DR746091.1|DR746091 RTCU1_34_D10.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_34_D10_A029 5', mRNA sequence
Length = 586
Score = 111 bits (237), Expect(2) = 5e-040
Identities = 49/84 (58%), Positives = 54/84 (64%)
Frame = -1 / +2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 206 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 385
Query: 463 EEELRYHLGLSNFTTGKGKVNLGD 392
EEELRY+LGL+N+TTGKGKVNL D
Sbjct: 386 EEELRYYLGLANYTTGKGKVNLSD 457
Score = 73.0 bits (153), Expect(2) = 5e-040
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = -1 / +3
Query: 391 SNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK* 296
SNVRP+EVFMCS+VRKMGYG+G KW+SQYIK*
Sbjct: 459 SNVRPIEVFMCSIVRKMGYGEGIKWLSQYIK* 554
Score = 61.1 bits (127), Expect(3) = 2e-023
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3 / -1
Query: 297 YLMYWETHLKPSP*PILRTTLHMKTSSGRTLESPRLTL 410
YLMYW++HL PSP PI RT LH+ TS GRTLE ++ L
Sbjct: 553 YLMYWDSHLIPSPYPIFRTILHINTSIGRTLEIGQIDL 440
Score = 59.3 bits (123), Expect(3) = 2e-023
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = +3 / -2
Query: 390 ESPRLTLPFPVVKLLRPR*YRXXXXEAAYGISILLPRMRNGTFAKE 527
+S +LTLP PVV RPR* R +AA GISIL PR+R GTF E
Sbjct: 459 KSDKLTLPLPVV*FARPR**RSSSSDAA*GISILFPRIRKGTFVNE 322
Score = 25.8 bits (50), Expect(3) = 2e-023
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -1
Query: 590 IYQVYYSINLCVVILPD 640
I++VY SI+L ++I PD
Sbjct: 259 IHEVYNSIHLGIIIFPD 209
>gb|CF392716.1|CF392716 RTDR3_5_C08.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_5_C08_A022 5', mRNA
sequence
Length = 724
Score = 156 bits (336), Expect = 1e-037
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 414 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 593
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMGY 335
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMGY
Sbjct: 594 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMGY 722
>gb|DR019998.1|DR019998 STRS1_34_A01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_34_A01_A034 3', mRNA sequence
Length = 798
Score = 153 bits (329), Expect = 1e-036
Identities = 66/102 (64%), Positives = 72/102 (70%)
Frame = -1 / -2
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 308 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 129
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMG 338
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMG
Sbjct: 128 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMG 3
>gb|DR683803.1|DR683803 EST1073879 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAL47 3' end, mRNA sequence
Length = 663
Score = 153 bits (329), Expect = 1e-036
Identities = 66/102 (64%), Positives = 72/102 (70%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 357 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 536
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMG 338
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMG
Sbjct: 537 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMG 662
>gb|DR688962.1|DR688962 EST1079048 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACC61 3' end, mRNA sequence
Length = 776
Score = 153 bits (329), Expect = 1e-036
Identities = 66/102 (64%), Positives = 72/102 (70%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 469 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 648
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRKMG 338
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRKMG
Sbjct: 649 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRKMG 774
>gb|CF395475.1|CF395475 RTDS2_11_F03.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_F03_A021 5', mRNA sequence
Length = 708
Score = 148 bits (318), Expect = 3e-035
Identities = 64/100 (64%), Positives = 70/100 (70%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 409 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 588
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMCSVVRK 344
E+ELRY+LGLSN+TTGKGKVNL DSNVRP+EVFMCS+VRK
Sbjct: 589 EDELRYYLGLSNYTTGKGKVNLADSNVRPIEVFMCSIVRK 708
>gb|DR120259.1|DR120259 RTMG1_28_C03.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_C03_A029 5', mRNA sequence
Length = 665
Score = 137 bits (294), Expect = 7e-032
Identities = 59/95 (62%), Positives = 65/95 (68%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 381 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 560
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRPLEVFMC 359
EEELRY+LGL+N+TTGKGKVNL DSNVRP+EVFMC
Sbjct: 561 EEELRYYLGLANYTTGKGKVNLSDSNVRPIEVFMC 665
>gb|DT631650.1|DT631650 EST1146581 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFB15 3' end, mRNA sequence
Length = 749
Score = 121 bits (259), Expect = 4e-027
Identities = 54/89 (60%), Positives = 58/89 (65%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKI IPYAAS
Sbjct: 481 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIGIPYAAS 660
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVRP 377
E+ELRY+LGLSN+TTGKGKVNL DSNVRP
Sbjct: 661 EDELRYYLGLSNYTTGKGKVNLADSNVRP 747
>gb|DT635043.1|DT635043 EST1149974 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGC55 3' end, mRNA sequence
Length = 785
Score = 103 bits (220), Expect(3) = 7e-027
Identities = 46/79 (58%), Positives = 50/79 (63%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKIDIPYAAS
Sbjct: 477 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIDIPYAAS 656
Query: 463 EEELRYHLGLSNFTTGKGK 407
E+ELRY+LGLSN+TTGKGK
Sbjct: 657 EDELRYYLGLSNYTTGKGK 713
Score = 30.9 bits (61), Expect(3) = 7e-027
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 415 KGKVNLGDSNVRPLE 371
+G+VNL DSNVRP+E
Sbjct: 704 QGQVNLADSNVRPIE 748
Score = 23.5 bits (45), Expect(3) = 7e-027
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / +1
Query: 370 VFMCSVVRK 344
VFMCS+VRK
Sbjct: 748 VFMCSIVRK 774
>gb|DR119795.1|DR119795 RTMG1_25_C09.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_25_C09_A029 5', mRNA sequence
Length = 749
Score = 120 bits (256), Expect = 1e-026
Identities = 53/88 (60%), Positives = 58/88 (65%)
Frame = -1 / +1
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE++KE NVPFLILGNKIDIPYAAS
Sbjct: 484 RVWKDYYAKVDAVIYLVDAADKERFAEARKELDALLTDDSLTNVPFLILGNKIDIPYAAS 663
Query: 463 EEELRYHLGLSNFTTGKGKVNLGDSNVR 380
EEELRY+LGL+N+TTGKGKVNL DSNVR
Sbjct: 664 EEELRYYLGLANYTTGKGKVNLSDSNVR 747
>gb|DR683411.1|DR683411 EST1073487 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAG84 3' end, mRNA sequence
Length = 609
Score = 109 bits (233), Expect = 2e-023
Identities = 49/84 (58%), Positives = 53/84 (63%)
Frame = -1 / +3
Query: 643 RVWXXXXXXXXXXXXXXXXXXKERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAAS 464
RVW KERFAE+KKE NVPFLILGNKI IPYAAS
Sbjct: 357 RVWKDYYAKVDAVVYLVDAADKERFAEAKKELDALLSDDSLTNVPFLILGNKIGIPYAAS 536
Query: 463 EEELRYHLGLSNFTTGKGKVNLGD 392
E+ELRY+LGLSN+TTGKGKVNL D
Sbjct: 537 EDELRYYLGLSNYTTGKGKVNLAD 608
>gb|CX653144.1|CX653144 COLD1_63_E02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_E02_A029 5', mRNA sequence
Length = 663
Score = 62.5 bits (130), Expect(3) = 2e-023
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -1 / +3
Query: 577 ERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFT 422
+RF ESK+E +PFL+LGNKIDIP AASE ELR LGL T
Sbjct: 336 DRFPESKRELDGLLSADDLKTIPFLVLGNKIDIPKAASEAELRQALGLHQTT 491
Score = 60.6 bits (126), Expect(3) = 2e-023
Identities = 18/29 (62%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 388 NVRPLEVFMCSVVRKMGYGDGFKWVSQYI 302
N+RP+E+FMCSVV++ GYG+GF+W+S Y+
Sbjct: 519 NIRPIEIFMCSVVKRSGYGEGFRWLSNYL 605
Score = 23.1 bits (44), Expect(3) = 2e-023
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 424 TTGKGKVNLGDS 389
TTGK K +LGD+
Sbjct: 486 TTGKNKTSLGDN 521
>gb|CX653063.1|CX653063 COLD1_63_E02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_E02_A029 3', mRNA sequence
Length = 658
Score = 62.5 bits (130), Expect(3) = 2e-023
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -1 / +1
Query: 577 ERFAESKKEXXXXXXXXXXANVPFLILGNKIDIPYAASEEELRYHLGLSNFT 422
+RF ESK+E +PFL+LGNKIDIP AASE ELR LGL T
Sbjct: 355 DRFPESKRELDGLLSADDLKTIPFLVLGNKIDIPKAASEAELRQALGLHQTT 510
Score = 60.6 bits (126), Expect(3) = 2e-023
Identities = 18/29 (62%), Positives = 27/29 (93%)
Frame = -1 / +1
Query: 388 NVRPLEVFMCSVVRKMGYGDGFKWVSQYI 302
N+RP+E+FMCSVV++ GYG+GF+W+S Y+
Sbjct: 538 NIRPIEIFMCSVVKRSGYGEGFRWLSNYL 624
Score = 23.1 bits (44), Expect(3) = 2e-023
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 424 TTGKGKVNLGDS 389
TTGK K +LGD+
Sbjct: 505 TTGKNKTSLGDN 540
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 330,773,451
Number of Sequences: 355925
Number of extensions: 5135680
Number of successful extensions: 42566
Number of sequences better than 1.0e-020: 54
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 8680740845
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)