TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440918.2.1
(1469 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT634196.1|DT634196 EST1149127 Normalized pine embryo li... 281 2e-091
gb|DR682788.1|DR682788 EST1072863 Normalized pine embryo li... 277 2e-090
gb|CF663228.1|CF663228 RTCNT1_1_C11.g1_A029 Root control Pi... 215 2e-089
gb|CO161327.1|CO161327 FLD1_28_C11.b1_A029 Root flooded Pin... 290 1e-082
gb|DR164099.1|DR164099 RTFE1_46_G03.g1_A029 Roots minus iro... 144 6e-081
gb|CF666432.1|CF666432 RTCNT1_23_F04.b1_A029 Root control P... 283 8e-080
gb|CO161405.1|CO161405 FLD1_28_C11.g1_A029 Root flooded Pin... 192 2e-077
gb|DT633972.1|DT633972 EST1148903 Normalized pine embryo li... 281 5e-076
gb|CF665386.1|CF665386 RTCNT1_15_E09.g1_A029 Root control P... 215 2e-075
gb|DR687518.1|DR687518 EST1077600 Normalized pine embryo li... 280 2e-074
gb|CV033874.1|CV033874 RTNACL1_37_D06.b1_A029 Roots plus ad... 184 5e-074
gb|DR682208.1|DR682208 EST1072283 Normalized pine embryo li... 277 1e-073
gb|DT634565.1|DT634565 EST1149496 Normalized pine embryo li... 252 3e-072
gb|CF665306.1|CF665306 RTCNT1_15_E09.b1_A029 Root control P... 175 6e-072
gb|CO161849.1|CO161849 FLD1_31_C06.g1_A029 Root flooded Pin... 106 1e-066
gb|DR177119.1|DR177119 RTMNUT1_3_F08.b1_A029 Roots minus mi... 186 2e-066
gb|CO165064.1|CO165064 FLD1_52_D01.b1_A029 Root flooded Pin... 156 2e-064
gb|DR057895.1|DR057895 RTNIT1_8_A09.g1_A029 Roots minus nit... 180 1e-062
gb|CF479650.1|CF479650 RTWW3_11_F11.g1_A022 Well-watered lo... 140 1e-062
gb|DR058106.1|DR058106 RTNIT1_9_F04.g1_A029 Roots minus nit... 142 5e-062
gb|CO365925.1|CO365925 RTK1_20_C04.b1_A029 Roots minus pota... 177 1e-060
gb|CX650543.1|CX650543 COLD1_46_A01.g1_A029 Root cold Pinus... 177 1e-060
gb|DR167700.1|DR167700 RTPHOS1_20_B06.g1_A029 Roots minus p... 177 1e-060
gb|CF388215.1|CF388215 RTDR2_1_A12.g1_A021 Loblolly pine ro... 177 1e-060
gb|CF388014.1|CF388014 RTDR1_17_B01.g1_A015 Loblolly pine r... 104 2e-060
gb|CO161877.1|CO161877 FLD1_31_F05.g1_A029 Root flooded Pin... 136 2e-060
gb|CO367149.1|CO367149 RTK1_32_B07.g1_A029 Roots minus pota... 155 2e-060
gb|DR090334.1|DR090334 RTAL1_14_H01.b1_A029 Roots plus adde... 177 3e-060
gb|CO165979.1|CO165979 FLD1_58_B01.g1_A029 Root flooded Pin... 176 9e-060
gb|DR682787.1|DR682787 EST1072862 Normalized pine embryo li... 131 2e-059
gb|DT631437.1|DT631437 EST1146368 Normalized pine embryo li... 106 3e-059
gb|DR079785.1|DR079785 RTFEPL1_17_D11.g1_A029 Roots plus ad... 105 2e-058
gb|CV034435.1|CV034435 RTNACL1_40_H06.g1_A029 Roots plus ad... 177 2e-058
gb|CX652846.1|CX652846 COLD1_61_G11.g1_A029 Root cold Pinus... 99 5e-058
dbj|BD224556.1| Materials and methods for the modification ... 131 5e-058
gb|DR178242.1|DR178242 RTMNUT1_10_G05.b1_A029 Roots minus m... 181 7e-058
gb|BX680067.1|BX680067 BX680067 RS Pinus pinaster cDNA clon... 111 1e-057
gb|CO201890.1|CO201890 RTCNT2_8_F12.g1_A029 Root control 2 ... 103 2e-057
gb|DR683701.1|DR683701 EST1073777 Normalized pine embryo li... 145 3e-057
gb|CF671964.1|CF671964 RTCNT1_60_A05.g1_A029 Root control P... 106 3e-057
gb|DR024613.1|DR024613 STRS1_66_E01.b1_A034 Shoot tip pitch... 93 4e-057
gb|DR090425.1|DR090425 RTAL1_15_A06.b1_A029 Roots plus adde... 105 5e-057
gb|CO370001.1|CO370001 RTK1_55_H10.g1_A029 Roots minus pota... 177 6e-057
gb|CX652982.1|CX652982 COLD1_62_E03.g1_A029 Root cold Pinus... 104 6e-057
gb|DR060871.1|DR060871 RTNIT1_30_C05.g1_A029 Roots minus ni... 93 8e-057
gb|DR050769.1|DR050769 RTBOR1_25_C07.g1_A029 Roots plus add... 102 2e-056
gb|CF389670.1|CF389670 RTDR2_8_D11.g1_A021 Loblolly pine ro... 106 2e-056
gb|CO163593.1|CO163593 FLD1_42_C09.g1_A029 Root flooded Pin... 154 2e-056
gb|DR387241.1|DR387241 RTHG1_20_A03.g1_A029 Roots plus adde... 105 4e-056
gb|DR177200.1|DR177200 RTMNUT1_3_F08.g1_A029 Roots minus mi... 93 6e-056
gb|DR742406.1|DR742406 RTCU1_3_G03.g2_A029 Roots plus added... 155 7e-056
gb|DR078213.1|DR078213 RTFEPL1_2_D10.g1_A029 Roots plus add... 105 8e-056
gb|CF666458.1|CF666458 RTCNT1_23_A08.g1_A029 Root control P... 166 8e-056
dbj|BD224561.1| Materials and methods for the modification ... 141 1e-055
gb|CX653299.1|CX653299 COLD1_64_E06.g1_A029 Root cold Pinus... 182 2e-055
gb|CO167718.1|CO167718 FLD1_70_E12.g1_A029 Root flooded Pin... 106 2e-055
gb|BQ701814.1|BQ701814 NXSI_120_H03_F NXSI (Nsf Xylem Side ... 169 3e-055
gb|DR683429.1|DR683429 EST1073505 Normalized pine embryo li... 106 3e-055
gb|CF672738.1|CF672738 RTCNT1_73_D06.g1_A029 Root control P... 106 3e-055
gb|CF477732.1|CF477732 RTWW3_9_H04.g1_A022 Well-watered lob... 96 5e-055
gb|CO366046.1|CO366046 RTK1_20_G03.g1_A029 Roots minus pota... 140 5e-055
gb|CO167565.1|CO167565 FLD1_69_E12.g1_A029 Root flooded Pin... 158 7e-055
gb|CR394209.1|CR394209 CR394209 RN Pinus pinaster cDNA clon... 161 1e-054
dbj|BD224562.1| Materials and methods for the modification ... 138 1e-054
gb|CO365485.1|CO365485 RTK1_17_G11.b1_A029 Roots minus pota... 144 2e-054
gb|CO165622.1|CO165622 FLD1_55_G07.g1_A029 Root flooded Pin... 90 3e-054
gb|DR011520.1|DR011520 HEAT1_6_E12.b1_A029 Root at 37 C for... 148 3e-054
gb|DR014964.1|DR014964 HEAT1_52_E04.g1_A029 Root at 37 C fo... 144 3e-054
gb|DR163917.1|DR163917 RTFE1_45_E11.g1_A029 Roots minus iro... 144 3e-054
gb|CF668988.1|CF668988 RTCNT1_39_H03.g1_A029 Root control P... 144 3e-054
gb|DR098772.1|DR098772 STRR1_47_F07.g1_A033 Stem Response R... 136 5e-054
gb|CO369276.1|CO369276 RTK1_46_C07.b1_A029 Roots minus pota... 144 6e-054
gb|CF673074.1|CF673074 RTCNT1_75_H04.g1_A029 Root control P... 144 6e-054
gb|DR080848.1|DR080848 RTFEPL1_25_D11.g1_A029 Roots plus ad... 144 6e-054
gb|CF474383.1|CF474383 RTWW2_20_F10.g1_A021 Well-watered lo... 100 1e-053
gb|CF387989.1|CF387989 RTDR1_17_C01.g1_A015 Loblolly pine r... 104 1e-053
gb|CF671224.1|CF671224 RTCNT1_55_D05.g1_A029 Root control P... 96 1e-053
gb|DR117522.1|DR117522 RTMG1_7_B03.g1_A029 Roots minus magn... 137 2e-053
gb|CF666727.1|CF666727 RTCNT1_25_E03.g1_A029 Root control P... 145 3e-053
gb|DR071838.1|DR071838 RTDK1_22_H10.b1_A029 Roots, dark Pin... 144 4e-053
gb|DR177199.1|DR177199 RTMNUT1_3_F07.g1_A029 Roots minus mi... 144 4e-053
gb|CF390722.1|CF390722 RTDR2_17_B08.g1_A021 Loblolly pine r... 137 4e-053
gb|DR096260.1|DR096260 STRR1_26_G02.g1_A033 Stem Response R... 137 4e-053
gb|CF663696.1|CF663696 RTCNT1_4_C09.g1_A029 Root control Pi... 137 6e-053
gb|CF385386.1|CF385386 RTDR1_3_E05.g1_A015 Loblolly pine ro... 137 6e-053
gb|DR100118.1|DR100118 STRR1_61_G12.g1_A033 Stem Response R... 142 8e-053
gb|DR057942.1|DR057942 RTNIT1_8_F01.g1_A029 Roots minus nit... 144 1e-052
gb|DR051349.1|DR051349 RTBOR1_29_A10.g1_A029 Roots plus add... 143 1e-052
gb|CF479349.1|CF479349 RTWW3_23_H03.g1_A022 Well-watered lo... 138 1e-052
gb|DR110447.1|DR110447 RTS1_11_A03.b1_A029 Roots minus sulf... 167 2e-052
gb|DR179643.1|DR179643 RTMNUT1_23_A02.g2_A029 Roots minus m... 167 2e-052
gb|CO367504.1|CO367504 RTK1_34_E10.g1_A029 Roots minus pota... 136 3e-052
gb|CO369965.1|CO369965 RTK1_55_C11.g1_A029 Roots minus pota... 100 3e-052
dbj|BD224564.1| Materials and methods for the modification ... 77 5e-052
gb|CF391811.1|CF391811 RTDR3_10_C10.b1_A022 Loblolly pine r... 141 5e-052
gb|CO167806.1|CO167806 FLD1_71_G07.b1_A029 Root flooded Pin... 139 1e-051
gb|DR089283.1|DR089283 RTAL1_7_E08.g1_A029 Roots plus added... 140 1e-051
gb|DR088958.1|DR088958 RTAL1_5_E09.g1_A029 Roots plus added... 132 1e-051
gb|DR102850.1|DR102850 STRR1_84_B05.g1_A033 Stem Response R... 105 1e-051
gb|CF475667.1|CF475667 RTWW2_11_A08.g1_A021 Well-watered lo... 141 1e-051
gb|CF471915.1|CF471915 RTDS1_7_E08.g1_A015 Drought-stressed... 167 1e-051
gb|CF402571.1|CF402571 RTWW1_21_C11.g1_A015 Well-watered lo... 90 2e-051
gb|CO167258.1|CO167258 FLD1_67_H01.g1_A029 Root flooded Pin... 137 3e-051
gb|DR102535.1|DR102535 STRR1_81_G06.g1_A033 Stem Response R... 137 3e-051
gb|DR050282.1|DR050282 RTBOR1_22_A07.g1_A029 Roots plus add... 144 3e-051
gb|CO161398.1|CO161398 FLD1_28_C04.g1_A029 Root flooded Pin... 138 3e-051
gb|CF664709.1|CF664709 RTCNT1_11_B04.g1_A029 Root control P... 106 4e-051
gb|CF390344.1|CF390344 RTDR2_18_B10.g1_A021 Loblolly pine r... 146 5e-051
gb|CO163084.1|CO163084 FLD1_39_H03.b1_A029 Root flooded Pin... 145 5e-051
gb|DR053196.1|DR053196 RTCA1_9_C11.g1_A029 Roots minus calc... 136 5e-051
gb|CF385187.1|CF385187 RTDR1_2_C03.g1_A015 Loblolly pine ro... 90 6e-051
gb|DR068658.1|DR068658 RTDK1_2_D02.b1_A029 Roots, dark Pinu... 85 6e-051
gb|DR094620.1|DR094620 STRR1_15_E08.g1_A033 Stem Response R... 131 8e-051
gb|AF291667.1|AF291667 Pinus sylvestris class III peroxidas... 76 9e-051
gb|DR050470.1|DR050470 RTBOR1_23_E09.g1_A029 Roots plus add... 162 9e-051
gb|CO197729.1|CO197729 GEO1_8_D08.g1_A029 Root gravitropism... 177 9e-051
gb|CO369092.1|CO369092 RTK1_44_H09.g1_A029 Roots minus pota... 144 1e-050
gb|CF401192.1|CF401192 RTWW1_10_H07.g1_A015 Well-watered lo... 132 4e-050
gb|DR069645.1|DR069645 RTDK1_8_C03.g1_A029 Roots, dark Pinu... 140 4e-050
gb|CX651325.1|CX651325 COLD1_51_C12.g1_A029 Root cold Pinus... 140 4e-050
gb|CO367969.1|CO367969 RTK1_37_G06.g1_A029 Roots minus pota... 140 4e-050
gb|CX713178.1|CX713178 RTPQ1_7_B01.g1_A032 Roots treated wi... 140 4e-050
gb|DR386060.1|DR386060 RTHG1_12_E05.g1_A029 Roots plus adde... 140 4e-050
gb|CX650291.1|CX650291 COLD1_44_E09.g1_A029 Root cold Pinus... 137 8e-050
gb|DR097614.1|DR097614 STRR1_35_H07.g4_A033 Stem Response R... 142 8e-050
gb|DR056162.1|DR056162 RTCA1_28_A10.g1_A029 Roots minus cal... 97 1e-049
gb|CO369651.1|CO369651 RTK1_48_C06.g1_A029 Roots minus pota... 138 1e-049
gb|CO361618.1|CO361618 NDL2_6_A03.b1_A029 Needles control 2... 138 2e-049
gb|DR056948.1|DR056948 RTNIT1_1_D03.g1_A029 Roots minus nit... 141 2e-049
gb|DR743106.1|DR743106 RTCU1_13_C11.g1_A029 Roots plus adde... 94 2e-049
gb|DR688340.1|DR688340 EST1078424 Normalized pine embryo li... 138 3e-049
gb|DT634752.1|DT634752 EST1149683 Normalized pine embryo li... 138 3e-049
gb|DR020955.1|DR020955 STRS1_40_A01.g1_A034 Shoot tip pitch... 136 3e-049
gb|BX678243.1|BX678243 BX678243 RN Pinus pinaster cDNA clon... 139 3e-049
gb|CF402751.1|CF402751 RTWW1_22_C06.g1_A015 Well-watered lo... 137 4e-049
gb|DR017190.1|DR017190 STRS1_14_D06.g1_A034 Shoot tip pitch... 144 4e-049
gb|CO366567.1|CO366567 RTK1_28_D08.g1_A029 Roots minus pota... 128 5e-049
gb|DR099040.1|DR099040 STRR1_52_C09.b1_A033 Stem Response R... 130 5e-049
gb|CX650746.1|CX650746 COLD1_47_G06.g1_A029 Root cold Pinus... 136 7e-049
gb|DR091318.1|DR091318 RTAL1_20_F12.g1_A029 Roots plus adde... 136 7e-049
gb|CO368475.1|CO368475 RTK1_40_G10.g1_A029 Roots minus pota... 143 1e-048
gb|DR182041.1|DR182041 RTMNUT1_42_C02.g1_A029 Roots minus m... 143 1e-048
gb|AL751293.1|AL751293 AL751293 RS Pinus pinaster cDNA clon... 68 1e-048
gb|DR163369.1|DR163369 RTFE1_42_B11.g1_A029 Roots minus iro... 138 1e-048
gb|CF477229.1|CF477229 RTWW3_6_G02.g1_A022 Well-watered lob... 140 2e-048
gb|DR025273.1|DR025273 STRS1_70_D08.g1_A034 Shoot tip pitch... 137 3e-048
gb|CO162150.1|CO162150 FLD1_33_B03.g1_A029 Root flooded Pin... 90 3e-048
gb|CF399623.1|CF399623 RTDS3_25_E09.b1_A022 Drought-stresse... 104 3e-048
gb|CO159581.1|CO159581 FLD1_14_B02.g1_A029 Root flooded Pin... 139 3e-048
gb|CF474883.1|CF474883 RTWW2_8_F04.g1_A021 Well-watered lob... 139 3e-048
gb|DR079581.1|DR079581 RTFEPL1_12_E11.b1_A029 Roots plus ad... 84 5e-048
gb|CF400026.1|CF400026 RTWW1_2_G05.g1_A015 Well-watered lob... 137 5e-048
gb|DR095060.1|DR095060 STRR1_18_C01.g1_A033 Stem Response R... 72 6e-048
gb|DR092596.1|DR092596 STRR1_2_A03.g1_A033 Stem Response Re... 145 8e-048
gb|CF389421.1|CF389421 RTDR2_7_F05.g1_A021 Loblolly pine ro... 146 9e-048
gb|DR685604.1|DR685604 EST1075681 Normalized pine embryo li... 135 1e-047
gb|DR017780.1|DR017780 STRS1_18_A08.g1_A034 Shoot tip pitch... 133 1e-047
gb|CO163625.1|CO163625 FLD1_42_F11.g1_A029 Root flooded Pin... 128 2e-047
gb|CO167878.1|CO167878 FLD1_71_G07.g1_A029 Root flooded Pin... 137 2e-047
gb|DR180626.1|DR180626 RTMNUT1_33_G02.g1_A029 Roots minus m... 128 2e-047
gb|CX646289.1|CX646289 COLD1_8_A11.g1_A029 Root cold Pinus ... 134 2e-047
gb|DR053478.1|DR053478 RTCA1_11_A02.g1_A029 Roots minus cal... 128 2e-047
gb|CF386345.1|CF386345 RTDR1_13_H08.g1_A015 Loblolly pine r... 132 2e-047
gb|CF385091.1|CF385091 RTDR1_1_H08.g1_A015 Loblolly pine ro... 132 2e-047
gb|DR052042.1|DR052042 RTCA1_2_C02.b1_A029 Roots minus calc... 144 2e-047
gb|DR013997.1|DR013997 HEAT1_22_F12.g1_A029 Root at 37 C fo... 144 2e-047
gb|CF666909.1|CF666909 RTCNT1_27_A03.b1_A029 Root control P... 133 2e-047
gb|CF668285.1|CF668285 RTCNT1_35_C05.g1_A029 Root control P... 144 2e-047
gb|DR060993.1|DR060993 RTNIT1_31_H08.b1_A029 Roots minus ni... 144 2e-047
gb|DR070821.1|DR070821 RTDK1_15_G06.g1_A029 Roots, dark Pin... 144 2e-047
gb|CF387576.1|CF387576 RTDR1_20_A04.g1_A015 Loblolly pine r... 105 3e-047
gb|DR683943.1|DR683943 EST1074019 Normalized pine embryo li... 133 3e-047
gb|DR079660.1|DR079660 RTFEPL1_12_E11.g1_A029 Roots plus ad... 84 4e-047
gb|CF401583.1|CF401583 RTWW1_13_A11.g1_A015 Well-watered lo... 137 4e-047
gb|CO367295.1|CO367295 RTK1_33_A07.g1_A029 Roots minus pota... 137 4e-047
gb|CF402030.1|CF402030 RTWW1_16_F01.g1_A015 Well-watered lo... 137 4e-047
gb|AL751213.1|AL751213 AL751213 RS Pinus pinaster cDNA clon... 68 6e-047
gb|CF670206.1|CF670206 RTCNT1_48_F03.g1_A029 Root control P... 143 6e-047
gb|DR110885.1|DR110885 RTS1_13_F04.g1_A029 Roots minus sulf... 167 6e-047
gb|DR019663.1|DR019663 STRS1_31_C06.g1_A034 Shoot tip pitch... 128 8e-047
gb|CF475232.1|CF475232 RTWW2_14_B02.g1_A021 Well-watered lo... 131 1e-046
gb|CX715825.1|CX715825 RTPQ1_36_F03.g1_A032 Roots treated w... 129 1e-046
gb|DR094759.1|DR094759 STRR1_16_C10.g1_A033 Stem Response R... 131 2e-046
gb|CF474576.1|CF474576 RTWW2_9_B10.g1_A021 Well-watered lob... 128 2e-046
gb|CX648735.1|CX648735 COLD1_30_C06.g1_A029 Root cold Pinus... 117 2e-046
gb|BX665987.1|BX665987 BX665987 RN Pinus pinaster cDNA clon... 131 2e-046
gb|CO366003.1|CO366003 RTK1_20_C04.g1_A029 Roots minus pota... 111 2e-046
gb|DR079272.1|DR079272 RTFEPL1_10_E10.b1_A029 Roots plus ad... 111 2e-046
gb|CF477895.1|CF477895 RTWW3_13_H05.g1_A022 Well-watered lo... 136 2e-046
gb|BX678783.1|BX678783 BX678783 RS Pinus pinaster cDNA clon... 103 2e-046
dbj|BD224558.1| Materials and methods for the modification ... 129 3e-046
gb|CO197668.1|CO197668 GEO1_8_D08.b1_A029 Root gravitropism... 111 4e-046
gb|DR092479.1|DR092479 STRR1_1_D06.g1_A033 Stem Response Re... 77 6e-046
gb|CF403089.1|CF403089 RTWW1_24_F04.g1_A015 Well-watered lo... 77 7e-046
gb|DR050063.1|DR050063 RTBOR1_21_C03.b1_A029 Roots plus add... 80 8e-046
gb|DR012568.1|DR012568 HEAT1_13_E03.g1_A029 Root at 37 C fo... 80 8e-046
gb|CO369936.1|CO369936 RTK1_55_H10.b1_A029 Roots minus pota... 108 9e-046
gb|CF386497.1|CF386497 RTDR1_14_C02.g1_A015 Loblolly pine r... 77 9e-046
gb|CO365861.1|CO365861 RTK1_19_E01.g1_A029 Roots minus pota... 143 1e-045
gb|DR024895.1|DR024895 STRS1_68_F04.b1_A034 Shoot tip pitch... 128 1e-045
gb|DR098451.1|DR098451 STRR1_45_C10.g1_A033 Stem Response R... 128 1e-045
gb|CX650346.1|CX650346 COLD1_45_C05.b1_A029 Root cold Pinus... 141 1e-045
gb|CF669107.1|CF669107 RTCNT1_40_E05.g1_A029 Root control P... 80 1e-045
gb|DR016129.1|DR016129 STRS1_7_H01.g1_A034 Shoot tip pitch ... 127 1e-045
gb|DR096218.1|DR096218 STRR1_26_C02.g1_A033 Stem Response R... 123 1e-045
gb|CF672147.1|CF672147 RTCNT1_61_E03.g1_A029 Root control P... 133 1e-045
gb|CX649818.1|CX649818 COLD1_41_E02.g1_A029 Root cold Pinus... 143 1e-045
gb|BQ699222.1|BQ699222 NXRV121_A06_F NXRV (Nsf Xylem Root w... 149 1e-045
gb|DR166815.1|DR166815 RTPHOS1_14_E01.g1_A029 Roots minus p... 77 1e-045
gb|DR166827.1|DR166827 RTPHOS1_14_F03.g1_A029 Roots minus p... 78 1e-045
gb|DR019654.1|DR019654 STRS1_31_B07.g1_A034 Shoot tip pitch... 77 1e-045
gb|CO161741.1|CO161741 FLD1_30_H02.g1_A029 Root flooded Pin... 141 2e-045
gb|DR071585.1|DR071585 RTDK1_20_G11.g1_A029 Roots, dark Pin... 130 2e-045
gb|DR109392.1|DR109392 RTS1_1_D12.g1_A029 Roots minus sulfu... 167 2e-045
gb|DR070948.1|DR070948 RTDK1_16_D02.g1_A029 Roots, dark Pin... 80 2e-045
gb|CF402460.1|CF402460 RTWW1_17_A06.g1_A015 Well-watered lo... 76 3e-045
gb|CF667757.1|CF667757 RTCNT1_32_H01.b1_A029 Root control P... 76 3e-045
dbj|BD224362.1| Materials and methods for the modification ... 168 3e-045
dbj|BD273000.1| Materials and methods for the modification ... 168 3e-045
gb|CO201166.1|CO201166 RTCNT2_4_C01.b1_A029 Root control 2 ... 79 3e-045
gb|CF400173.1|CF400173 RTWW1_3_F07.g1_A015 Well-watered lob... 132 4e-045
gb|CF387078.1|CF387078 RTDR1_10_H09.g1_A015 Loblolly pine r... 132 4e-045
gb|DR742871.1|DR742871 RTCU1_7_C01.g2_A029 Roots plus added... 132 4e-045
gb|DR016861.1|DR016861 STRS1_12_D06.g1_A034 Shoot tip pitch... 77 4e-045
gb|DR052158.1|DR052158 RTCA1_2_F12.g1_A029 Roots minus calc... 80 4e-045
gb|CO157877.1|CO157877 FLD1_2_F04.g1_A029 Root flooded Pinu... 126 5e-045
gb|CO364892.1|CO364892 RTK1_22_A03.g1_A029 Roots minus pota... 76 5e-045
gb|CO197967.1|CO197967 GEO1_10_H07.b1_A029 Root gravitropis... 138 6e-045
gb|CO199407.1|CO199407 GEO2_1_A09.b1_A032 Root gravitropism... 82 6e-045
gb|CF391763.1|CF391763 RTDR3_11_E05.g1_A022 Loblolly pine r... 120 7e-045
gb|CO161841.1|CO161841 FLD1_31_B09.g1_A029 Root flooded Pin... 80 9e-045
gb|DR016727.1|DR016727 STRS1_11_G02.g1_A034 Shoot tip pitch... 80 9e-045
gb|CO364127.1|CO364127 RTK1_13_G11.g1_A029 Roots minus pota... 106 9e-045
gb|DR092597.1|DR092597 STRR1_2_A04.g1_A033 Stem Response Re... 144 1e-044
gb|DR117444.1|DR117444 RTMG1_7_B03.b1_A029 Roots minus magn... 137 1e-044
gb|DR056492.1|DR056492 RTCA1_30_D07.g1_A029 Roots minus cal... 124 2e-044
dbj|BD224552.1| Materials and methods for the modification ... 117 2e-044
gb|DR110107.1|DR110107 RTS1_8_C10.g1_A029 Roots minus sulfu... 124 2e-044
gb|CF400609.1|CF400609 RTWW1_6_D05.g1_A015 Well-watered lob... 87 2e-044
gb|DR061033.1|DR061033 RTNIT1_31_D08.g1_A029 Roots minus ni... 80 2e-044
gb|CX715978.1|CX715978 RTPQ1_39_D06.b1_A032 Roots treated w... 102 2e-044
gb|CF479199.1|CF479199 RTWW3_24_F05.g1_A022 Well-watered lo... 121 2e-044
gb|DR072451.1|DR072451 RTDK1_26_H06.b1_A029 Roots, dark Pin... 134 2e-044
gb|DR012489.1|DR012489 HEAT1_13_E03.b1_A029 Root at 37 C fo... 80 3e-044
gb|CF389796.1|CF389796 RTDR2_5_A11.g1_A021 Loblolly pine ro... 120 3e-044
gb|CF395450.1|CF395450 RTDS2_11_D11.g1_A021 Drought-stresse... 120 3e-044
gb|DR179945.1|DR179945 RTMNUT1_25_B11.g1_A029 Roots minus m... 120 3e-044
gb|DR386541.1|DR386541 RTHG1_15_H06.g1_A029 Roots plus adde... 123 3e-044
gb|DR021354.1|DR021354 STRS1_44_C09.b1_A034 Shoot tip pitch... 132 4e-044
gb|BX678020.1|BX678020 BX678020 RN Pinus pinaster cDNA clon... 102 4e-044
gb|DR109614.1|DR109614 RTS1_3_B07.g1_A029 Roots minus sulfu... 137 4e-044
gb|CF391571.1|CF391571 RTDR3_9_C02.g1_A022 Loblolly pine ro... 128 4e-044
gb|CF402767.1|CF402767 RTWW1_22_E05.g1_A015 Well-watered lo... 76 5e-044
gb|CR394388.1|CR394388 CR394388 RN Pinus pinaster cDNA clon... 102 5e-044
gb|DR047581.1|DR047581 RTBOR1_2_C02.b1_A029 Roots plus adde... 178 7e-044
gb|DR388727.1|DR388727 RTHG1_30_D05.b1_A029 Roots plus adde... 77 7e-044
gb|DR744454.1|DR744454 RTCU1_22_C07.g1_A029 Roots plus adde... 77 7e-044
gb|DR098171.1|DR098171 STRR1_39_C08.g1_A033 Stem Response R... 77 7e-044
gb|CF387396.1|CF387396 RTDR1_12_G07.g1_A015 Loblolly pine r... 122 8e-044
gb|CO160524.1|CO160524 FLD1_21_C12.g1_A029 Root flooded Pin... 157 1e-043
gb|DR090469.1|DR090469 RTAL1_15_F06.b1_A029 Roots plus adde... 132 1e-043
gb|CF401639.1|CF401639 RTWW1_14_B03.b1_A015 Well-watered lo... 90 1e-043
gb|DR070964.1|DR070964 RTDK1_16_E10.g1_A029 Roots, dark Pin... 127 1e-043
gb|DR025291.1|DR025291 STRS1_70_F04.g1_A034 Shoot tip pitch... 148 1e-043
gb|DR023270.1|DR023270 STRS1_56_B11.g1_A034 Shoot tip pitch... 132 1e-043
gb|CF390326.1|CF390326 RTDR2_18_B09.g1_A021 Loblolly pine r... 76 1e-043
gb|DR025204.1|DR025204 STRS1_70_F04.b1_A034 Shoot tip pitch... 148 1e-043
gb|DR015946.1|DR015946 STRS1_6_E05.g1_A034 Shoot tip pitch ... 148 1e-043
gb|DR080434.1|DR080434 RTFEPL1_22_D07.g1_A029 Roots plus ad... 177 2e-043
gb|DR112253.1|DR112253 RTS1_26_H10.g1_A029 Roots minus sulf... 177 2e-043
gb|CO201246.1|CO201246 RTCNT2_4_C01.g1_A029 Root control 2 ... 73 2e-043
gb|CO164839.1|CO164839 FLD1_50_D08.g1_A029 Root flooded Pin... 116 2e-043
gb|CO369083.1|CO369083 RTK1_44_G07.g1_A029 Roots minus pota... 144 2e-043
gb|DR011877.1|DR011877 HEAT1_8_B03.g1_A029 Root at 37 C for... 144 2e-043
gb|DR052270.1|DR052270 RTCA1_3_B12.g1_A029 Roots minus calc... 144 2e-043
gb|DR069696.1|DR069696 RTDK1_8_H07.g1_A029 Roots, dark Pinu... 80 2e-043
gb|DR093384.1|DR093384 STRR1_7_H12.g1_A033 Stem Response Re... 69 2e-043
gb|DR069584.1|DR069584 RTDK1_8_D05.b1_A029 Roots, dark Pinu... 78 2e-043
gb|DR020775.1|DR020775 STRS1_39_E10.b1_A034 Shoot tip pitch... 78 2e-043
gb|CO161433.1|CO161433 FLD1_28_F07.g1_A029 Root flooded Pin... 78 2e-043
gb|CO159641.1|CO159641 FLD1_14_G12.g1_A029 Root flooded Pin... 78 2e-043
gb|DR388706.1|DR388706 RTHG1_30_B04.b1_A029 Roots plus adde... 78 2e-043
gb|CO200887.1|CO200887 RTCNT2_2_F01.b1_A029 Root control 2 ... 130 2e-043
gb|DR054873.1|DR054873 RTCA1_20_C08.b1_A029 Roots minus cal... 78 2e-043
gb|CF479061.1|CF479061 RTWW3_21_H03.g1_A022 Well-watered lo... 78 2e-043
gb|DR090620.1|DR090620 RTAL1_16_G09.b1_A029 Roots plus adde... 78 2e-043
gb|DR072085.1|DR072085 RTDK1_24_B05.b1_A029 Roots, dark Pin... 78 2e-043
gb|CF478836.1|CF478836 RTWW3_15_F06.g1_A022 Well-watered lo... 78 2e-043
gb|CF384952.1|CF384952 RTDR1_1_B07.b1_A015 Loblolly pine ro... 78 2e-043
gb|CX651458.1|CX651458 COLD1_52_C01.g1_A029 Root cold Pinus... 99 3e-043
gb|DR109985.1|DR109985 RTS1_1_D12.b1_A029 Roots minus sulfu... 120 3e-043
gb|CO198153.1|CO198153 GEO1_11_D08.g1_A029 Root gravitropis... 147 3e-043
gb|DT624624.1|DT624624 EST1158959 Sequencing ESTs from lobl... 122 4e-043
gb|DT624683.1|DT624683 EST1159018 Sequencing ESTs from lobl... 122 4e-043
gb|CV144839.1|CV144839 EST856048 Sequencing ESTs from loblo... 122 4e-043
gb|CF664931.1|CF664931 RTCNT1_12_G05.g1_A029 Root control P... 171 4e-043
gb|CF470435.1|CF470435 RTDS1_17_F06.g1_A015 Drought-stresse... 78 5e-043
gb|CV033121.1|CV033121 RTNACL1_20_A12.g1_A029 Roots plus ad... 74 5e-043
gb|DT631954.1|DT631954 EST1146885 Normalized pine embryo li... 119 5e-043
emb|AJ251254.1|PPI251254 Pinus pinaster partial mRNA for pe... 80 6e-043
gb|DR088951.1|DR088951 RTAL1_5_E01.g1_A029 Roots plus added... 151 6e-043
gb|CF476315.1|CF476315 RTWW2_22_C12.g1_A021 Well-watered lo... 78 6e-043
gb|CV036319.1|CV036319 RTNACL1_58_H07.b1_A029 Roots plus ad... 144 9e-043
gb|CV145607.1|CV145607 EST856816 Sequencing ESTs from loblo... 120 1e-042
gb|CF474861.1|CF474861 RTWW2_8_B09.g1_A021 Well-watered lob... 168 1e-042
gb|CO160800.1|CO160800 FLD1_24_B07.g1_A029 Root flooded Pin... 82 2e-042
gb|BX681908.1|BX681908 BX681908 RS Pinus pinaster cDNA clon... 102 2e-042
gb|BX678596.1|BX678596 BX678596 RS Pinus pinaster cDNA clon... 102 2e-042
gb|CO164811.1|CO164811 FLD1_50_A12.g1_A029 Root flooded Pin... 155 2e-042
gb|CF385370.1|CF385370 RTDR1_3_C04.g1_A015 Loblolly pine ro... 132 2e-042
gb|DR052199.1|DR052199 RTCA1_3_B12.b1_A029 Roots minus calc... 144 2e-042
gb|DR101820.1|DR101820 STRR1_76_C09.b1_A033 Stem Response R... 80 2e-042
gb|CV033076.1|CV033076 RTNACL1_20_D02.b1_A029 Roots plus ad... 144 2e-042
gb|DT637471.1|DT637471 EST1152402 Normalized pine embryo li... 71 3e-042
gb|DR110599.1|DR110599 RTS1_11_G03.g1_A029 Roots minus sulf... 112 3e-042
gb|DR057812.1|DR057812 RTNIT1_8_A09.b1_A029 Roots minus nit... 78 3e-042
gb|CO172748.1|CO172748 NDL1_31_D06.g1_A029 Needles control ... 168 4e-042
gb|DR021429.1|DR021429 STRS1_44_C12.g1_A034 Shoot tip pitch... 168 4e-042
gb|CF387426.1|CF387426 RTDR1_12_G02.g1_A015 Loblolly pine r... 168 4e-042
gb|CF479871.1|CF479871 RTWW3_12_F05.g1_A022 Well-watered lo... 168 4e-042
gb|CF387537.1|CF387537 RTDR1_20_E09.g1_A015 Loblolly pine r... 168 4e-042
gb|CO165589.1|CO165589 FLD1_55_D01.g1_A029 Root flooded Pin... 168 4e-042
gb|DR096988.1|DR096988 STRR1_31_E08.g1_A033 Stem Response R... 168 4e-042
gb|CF387856.1|CF387856 RTDR1_18_A03.g1_A015 Loblolly pine r... 168 4e-042
gb|CF672014.1|CF672014 RTCNT1_60_F06.g1_A029 Root control P... 168 4e-042
gb|CV035963.1|CV035963 RTNACL1_43_E04.g1_A029 Roots plus ad... 131 4e-042
gb|CV032135.1|CV032135 RTNACL1_6_D04.b1_A029 Roots plus add... 144 4e-042
gb|CF476953.1|CF476953 RTWW3_4_G10.g1_A022 Well-watered lob... 91 4e-042
gb|CO365129.1|CO365129 RTK1_23_G04.g1_A029 Roots minus pota... 122 4e-042
gb|CF390688.1|CF390688 RTDR2_20_D12.g1_A021 Loblolly pine r... 122 5e-042
gb|CF390110.1|CF390110 RTDR2_12_D07.g1_A021 Loblolly pine r... 168 5e-042
gb|DR743557.1|DR743557 RTCU1_16_E06.g1_A029 Roots plus adde... 120 5e-042
gb|DR012184.1|DR012184 HEAT1_10_F10.g1_A029 Root at 37 C fo... 107 5e-042
gb|CR393291.1|CR393291 CR393291 RN Pinus pinaster cDNA clon... 107 5e-042
gb|DR089697.1|DR089697 RTAL1_10_F08.b1_A029 Roots plus adde... 78 6e-042
gb|BX681393.1|BX681393 BX681393 RS Pinus pinaster cDNA clon... 77 6e-042
gb|DR079676.1|DR079676 RTFEPL1_12_G05.g1_A029 Roots plus ad... 79 6e-042
gb|DR093842.1|DR093842 STRR1_10_F04.g1_A033 Stem Response R... 80 7e-042
gb|DR687240.1|DR687240 EST1077320 Normalized pine embryo li... 171 8e-042
gb|DR013610.1|DR013610 HEAT1_20_H06.b1_A029 Root at 37 C fo... 168 9e-042
gb|CF388644.1|CF388644 RTDR2_4_F12.g1_A021 Loblolly pine ro... 168 9e-042
gb|DR053217.1|DR053217 RTCA1_9_E10.g1_A029 Roots minus calc... 168 9e-042
gb|CF474441.1|CF474441 RTWW2_20_C10.g1_A021 Well-watered lo... 168 9e-042
gb|CF479368.1|CF479368 RTWW3_23_A06.g1_A022 Well-watered lo... 168 9e-042
gb|BX679939.1|BX679939 BX679939 RS Pinus pinaster cDNA clon... 144 9e-042
gb|DR089676.1|DR089676 RTAL1_10_D10.b1_A029 Roots plus adde... 74 1e-041
gb|DR053596.1|DR053596 RTCA1_12_D09.b1_A029 Roots minus cal... 73 1e-041
gb|DR017336.1|DR017336 STRS1_15_D06.g1_A034 Shoot tip pitch... 168 1e-041
gb|DR070887.1|DR070887 RTDK1_16_E10.b1_A029 Roots, dark Pin... 127 1e-041
gb|CF663152.1|CF663152 RTCNT1_1_C11.b1_A029 Root control Pi... 73 2e-041
gb|CO366240.1|CO366240 RTK1_26_E06.g1_A029 Roots minus pota... 166 2e-041
gb|CO161767.1|CO161767 FLD1_31_B09.b1_A029 Root flooded Pin... 80 2e-041
gb|CF401276.1|CF401276 RTWW1_11_H12.g1_A015 Well-watered lo... 165 2e-041
gb|CO369379.1|CO369379 RTK1_46_E11.g1_A029 Roots minus pota... 139 3e-041
gb|BX679729.1|BX679729 BX679729 RS Pinus pinaster cDNA clon... 111 3e-041
gb|CF400208.1|CF400208 RTWW1_3_D09.g1_A015 Well-watered lob... 170 3e-041
gb|DR021541.1|DR021541 STRS1_45_H03.b1_A034 Shoot tip pitch... 109 4e-041
gb|CO365673.1|CO365673 RTK1_18_B06.g1_A029 Roots minus pota... 126 4e-041
gb|CR393173.1|CR393173 CR393173 RN Pinus pinaster cDNA clon... 141 4e-041
gb|DR021011.1|DR021011 STRS1_40_F08.g1_A034 Shoot tip pitch... 73 4e-041
gb|CF386284.1|CF386284 RTDR1_13_D02.g1_A015 Loblolly pine r... 164 5e-041
gb|DR162114.1|DR162114 RTFE1_15_G11.g1_A029 Roots minus iro... 136 5e-041
gb|CF385253.1|CF385253 RTDR1_2_F11.g1_A015 Loblolly pine ro... 164 6e-041
gb|CF403052.1|CF403052 RTWW1_24_H02.g1_A015 Well-watered lo... 164 6e-041
gb|DR102514.1|DR102514 STRR1_81_E02.g1_A033 Stem Response R... 165 6e-041
gb|CF667641.1|CF667641 RTCNT1_31_D05.g1_A029 Root control P... 136 7e-041
gb|CF388515.1|CF388515 RTDR2_3_F02.g1_A021 Loblolly pine ro... 76 7e-041
gb|DR070157.1|DR070157 RTDK1_11_D06.g1_A029 Roots, dark Pin... 168 1e-040
gb|CF387520.1|CF387520 RTDR1_20_G04.g1_A015 Loblolly pine r... 164 1e-040
gb|BI202915.1|BI202915 NXPV_092_D11_F NXPV (Nsf Xylem Plani... 107 1e-040
gb|DR016829.1|DR016829 STRS1_12_A06.g1_A034 Shoot tip pitch... 131 1e-040
gb|DR181212.1|DR181212 RTMNUT1_37_B09.g2_A029 Roots minus m... 143 2e-040
gb|CF385062.1|CF385062 RTDR1_1_G01.g1_A015 Loblolly pine ro... 164 2e-040
gb|CO161773.1|CO161773 FLD1_31_C06.b1_A029 Root flooded Pin... 106 2e-040
gb|CF475874.1|CF475874 RTWW2_15_B12.g1_A021 Well-watered lo... 76 2e-040
gb|DR099813.1|DR099813 STRR1_58_F12.g1_A033 Stem Response R... 71 3e-040
gb|DR093649.1|DR093649 STRR1_9_C07.g1_A033 Stem Response Re... 84 3e-040
gb|CF671723.1|CF671723 RTCNT1_58_H03.g1_A029 Root control P... 143 3e-040
gb|CF666632.1|CF666632 RTCNT1_24_G05.g1_A029 Root control P... 109 3e-040
gb|AL751013.1|AL751013 AL751013 RS Pinus pinaster cDNA clon... 161 3e-040
gb|DR742794.1|DR742794 RTCU1_7_C01.b2_A029 Roots plus added... 119 3e-040
gb|CF398318.1|CF398318 RTDS3_24_E08.g1_A022 Drought-stresse... 80 3e-040
gb|BX250306.1|BX250306 BX250306 Pinus pinaster differenciat... 166 4e-040
gb|BX250670.1|BX250670 BX250670 Pinus pinaster differenciat... 166 4e-040
gb|BX252200.1|BX252200 BX252200 Pinus pinaster differenciat... 166 4e-040
gb|BX678106.1|BX678106 BX678106 RN Pinus pinaster cDNA clon... 166 4e-040
gb|DR054402.1|DR054402 RTCA1_17_C12.b1_A029 Roots minus cal... 144 4e-040
gb|CO201333.1|CO201333 RTCNT2_5_C07.b1_A029 Root control 2 ... 75 4e-040
gb|CO167173.1|CO167173 FLD1_67_H01.b1_A029 Root flooded Pin... 123 4e-040
gb|DT631708.1|DT631708 EST1146639 Normalized pine embryo li... 102 6e-040
gb|DR112423.1|DR112423 RTS1_28_D01.b1_A029 Roots minus sulf... 157 6e-040
gb|BX679095.1|BX679095 BX679095 RS Pinus pinaster cDNA clon... 118 6e-040
gb|DR089205.1|DR089205 RTAL1_7_E08.b1_A029 Roots plus added... 139 6e-040
gb|CF386437.1|CF386437 RTDR1_14_G05.g1_A015 Loblolly pine r... 160 8e-040
gb|CF389982.1|CF389982 RTDR2_11_E01.g1_A021 Loblolly pine r... 71 8e-040
gb|CF399844.1|CF399844 RTWW1_1_C02.g1_A015 Well-watered lob... 164 1e-039
gb|CO365109.1|CO365109 RTK1_23_E07.g1_A029 Roots minus pota... 100 2e-039
gb|CO163808.1|CO163808 FLD1_43_H11.g1_A029 Root flooded Pin... 96 2e-039
gb|BX676904.1|BX676904 BX676904 RN Pinus pinaster cDNA clon... 68 2e-039
gb|DR023305.1|DR023305 STRS1_56_E12.g1_A034 Shoot tip pitch... 84 2e-039
gb|DR744459.1|DR744459 RTCU1_22_C12.g1_A029 Roots plus adde... 84 2e-039
gb|DR098377.1|DR098377 STRR1_45_C10.b1_A033 Stem Response R... 128 2e-039
gb|DR099155.1|DR099155 STRR1_53_B10.g1_A033 Stem Response R... 128 2e-039
gb|DR094872.1|DR094872 STRR1_17_G08.b1_A033 Stem Response R... 117 2e-039
gb|BX680553.1|BX680553 BX680553 RS Pinus pinaster cDNA clon... 98 2e-039
gb|DR019550.1|DR019550 STRS1_30_G04.g1_A034 Shoot tip pitch... 69 2e-039
gb|BG040715.1|BG040715 NXSI_114_C05_F NXSI (Nsf Xylem Side ... 163 2e-039
gb|DR179333.1|DR179333 RTMNUT1_21_A03.g2_A029 Roots minus m... 94 3e-039
gb|DR164350.1|DR164350 RTFE1_48_H08.b1_A029 Roots minus iro... 100 3e-039
gb|BQ701728.1|BQ701728 NXSI_118_H09_F NXSI (Nsf Xylem Side ... 163 3e-039
gb|CV034771.1|CV034771 RTNACL1_11_B05.g1_A029 Roots plus ad... 163 3e-039
gb|CF394286.1|CF394286 RTDS2_4_D09.g1_A021 Drought-stressed... 109 4e-039
gb|DR099196.1|DR099196 STRR1_53_F12.g1_A033 Stem Response R... 69 4e-039
gb|DR054864.1|DR054864 RTCA1_20_B09.b1_A029 Roots minus cal... 100 4e-039
gb|BX683017.1|BX683017 BX683017 Pinus pinaster differenciat... 162 5e-039
gb|DR094945.1|DR094945 STRR1_17_F11.g1_A033 Stem Response R... 68 6e-039
gb|DR015598.1|DR015598 STRS1_4_B03.g1_A034 Shoot tip pitch ... 104 7e-039
gb|DR094440.1|DR094440 STRR1_14_D01.g1_A033 Stem Response R... 140 9e-039
gb|DR052119.1|DR052119 RTCA1_2_C02.g1_A029 Roots minus calc... 128 1e-038
gb|BX681249.1|BX681249 BX681249 RS Pinus pinaster cDNA clon... 161 1e-038
gb|DR094953.1|DR094953 STRR1_17_G08.g1_A033 Stem Response R... 113 1e-038
gb|DR025010.1|DR025010 STRS1_69_B12.b1_A034 Shoot tip pitch... 80 1e-038
gb|CO166402.1|CO166402 FLD1_61_E10.g1_A029 Root flooded Pin... 101 2e-038
gb|DR097295.1|DR097295 STRR1_33_F08.g3_A033 Stem Response R... 67 2e-038
gb|DR020411.1|DR020411 STRS1_36_F08.g1_A034 Shoot tip pitch... 101 2e-038
gb|CO366264.1|CO366264 RTK1_26_G06.g1_A029 Roots minus pota... 81 2e-038
gb|CO366088.1|CO366088 RTK1_25_F07.g1_A029 Roots minus pota... 80 3e-038
gb|DR095236.1|DR095236 STRR1_19_E06.g1_A033 Stem Response R... 147 3e-038
gb|CF665923.1|CF665923 RTCNT1_19_A06.g1_A029 Root control P... 143 3e-038
gb|DR057854.1|DR057854 RTNIT1_8_F01.b1_A029 Roots minus nit... 127 4e-038
gb|CX651389.1|CX651389 COLD1_52_C01.b1_A029 Root cold Pinus... 99 4e-038
gb|CX649190.1|CX649190 COLD1_33_C02.g1_A029 Root cold Pinus... 159 4e-038
gb|CO200480.1|CO200480 GEO2_7_E11.g1_A032 Root gravitropism... 126 5e-038
gb|CO173375.1|CO173375 NDL1_35_F08.g1_A029 Needles control ... 146 5e-038
gb|CF386285.1|CF386285 RTDR1_13_E11.g1_A015 Loblolly pine r... 122 5e-038
gb|CO160864.1|CO160864 FLD1_25_D04.b1_A029 Root flooded Pin... 127 7e-038
gb|CF473758.1|CF473758 RTWW2_4_H09.g1_A021 Well-watered lob... 80 7e-038
gb|DR163463.1|DR163463 RTFE1_43_C04.b1_A029 Roots minus iro... 68 7e-038
gb|CF670391.1|CF670391 RTCNT1_49_H09.g1_A029 Root control P... 68 7e-038
gb|CF388147.1|CF388147 RTDR2_1_B04.b1_A021 Loblolly pine ro... 80 7e-038
gb|CF476619.1|CF476619 RTWW3_2_E11.g1_A022 Well-watered lob... 95 7e-038
gb|BG040407.1|BG040407 NXSI_107_H09_F NXSI (Nsf Xylem Side ... 69 7e-038
gb|CR392474.1|CR392474 CR392474 RN Pinus pinaster cDNA clon... 102 7e-038
gb|CX650140.1|CX650140 COLD1_43_F05.g1_A029 Root cold Pinus... 141 7e-038
gb|CF399148.1|CF399148 RTDS3_9_F04.g1_A022 Drought-stressed... 80 9e-038
gb|DR096568.1|DR096568 STRR1_28_F12.g1_A033 Stem Response R... 62 9e-038
gb|DR163290.1|DR163290 RTFE1_42_B11.b1_A029 Roots minus iro... 138 1e-037
gb|CO166058.1|CO166058 FLD1_59_B07.b1_A029 Root flooded Pin... 81 1e-037
gb|DR060481.1|DR060481 RTNIT1_28_C11.b1_A029 Roots minus ni... 129 1e-037
gb|CO165597.1|CO165597 FLD1_55_D10.g1_A029 Root flooded Pin... 79 1e-037
gb|CO160498.1|CO160498 FLD1_21_A02.g1_A029 Root flooded Pin... 79 1e-037
gb|DR102098.1|DR102098 STRR1_78_A01.g1_A033 Stem Response R... 73 1e-037
gb|AL750649.1|AL750649 AL750649 RN Pinus pinaster cDNA clon... 157 1e-037
gb|CO411590.1|CO411590 EST841975 Sequencing ESTs from loblo... 157 1e-037
gb|DN448778.1|DN448778 EST944577 Sequencing ESTs from loblo... 157 1e-037
gb|DN448978.1|DN448978 EST944777 Sequencing ESTs from loblo... 157 1e-037
gb|DN449410.1|DN449410 EST945209 Sequencing ESTs from loblo... 157 1e-037
gb|DN457526.1|DN457526 EST953325 Sequencing ESTs from loblo... 157 1e-037
gb|DN462107.1|DN462107 EST957906 Sequencing ESTs from loblo... 157 1e-037
gb|DR166844.1|DR166844 RTPHOS1_14_H05.g1_A029 Roots minus p... 157 1e-037
gb|DT624332.1|DT624332 EST1158607 Sequencing ESTs from lobl... 157 1e-037
gb|DT624617.1|DT624617 EST1158952 Sequencing ESTs from lobl... 157 1e-037
gb|DR100195.1|DR100195 STRR1_62_H04.b1_A033 Stem Response R... 138 1e-037
gb|CF671003.1|CF671003 RTCNT1_54_C01.b1_A029 Root control P... 127 2e-037
gb|DR058888.1|DR058888 RTNIT1_14_B05.g1_A029 Roots minus ni... 105 2e-037
gb|CF665191.1|CF665191 RTCNT1_14_A12.g1_A029 Root control P... 77 2e-037
gb|CF477599.1|CF477599 RTWW3_8_F03.g1_A022 Well-watered lob... 122 2e-037
gb|CR393411.1|CR393411 CR393411 RN Pinus pinaster cDNA clon... 91 2e-037
gb|CF478391.1|CF478391 RTWW3_18_D09.g1_A022 Well-watered lo... 156 3e-037
gb|CO173071.1|CO173071 NDL1_33_G05.g1_A029 Needles control ... 138 3e-037
gb|CO162320.1|CO162320 FLD1_34_C07.g1_A029 Root flooded Pin... 66 3e-037
gb|DR100064.1|DR100064 STRR1_61_G12.b1_A033 Stem Response R... 126 4e-037
gb|CF392395.1|CF392395 RTDR3_7_B06.g1_A022 Loblolly pine ro... 118 4e-037
gb|CX652768.1|CX652768 COLD1_61_G11.b1_A029 Root cold Pinus... 99 4e-037
gb|CF390300.1|CF390300 RTDR2_18_C09.g1_A021 Loblolly pine r... 76 5e-037
gb|CX646640.1|CX646640 COLD1_10_C08.g1_A029 Root cold Pinus... 116 6e-037
gb|CF387203.1|CF387203 RTDR1_11_E10.g1_A015 Loblolly pine r... 71 6e-037
gb|CF402040.1|CF402040 RTWW1_16_F12.g1_A015 Well-watered lo... 69 6e-037
gb|BX667556.1|BX667556 BX667556 RN Pinus pinaster cDNA clon... 97 8e-037
gb|BQ634793.1|BQ634793 NXRV073_C08_F NXRV (Nsf Xylem Root w... 155 1e-036
gb|CO167831.1|CO167831 FLD1_71_B03.g1_A029 Root flooded Pin... 155 1e-036
gb|DR021330.1|DR021330 STRS1_43_H11.g1_A034 Shoot tip pitch... 78 1e-036
gb|CF471789.1|CF471789 RTDS1_6_E07.g1_A015 Drought-stressed... 84 1e-036
gb|CO165128.1|CO165128 FLD1_52_C03.g1_A029 Root flooded Pin... 95 1e-036
gb|CO168677.1|CO168677 NDL1_1_F03.g1_A029 Needles control P... 80 1e-036
gb|CO164640.1|CO164640 FLD1_49_G12.b1_A029 Root flooded Pin... 133 2e-036
gb|DR096212.1|DR096212 STRR1_26_B07.g1_A033 Stem Response R... 138 2e-036
gb|CO364042.1|CO364042 RTK1_13_G11.b1_A029 Roots minus pota... 106 2e-036
gb|DR692763.1|DR692763 EST1082851 Normalized pine embryo li... 71 2e-036
gb|CR394449.1|CR394449 CR394449 RN Pinus pinaster cDNA clon... 69 2e-036
gb|CF470625.1|CF470625 RTDS1_13_E05.g1_A015 Drought-stresse... 75 3e-036
gb|DR688296.1|DR688296 EST1078380 Normalized pine embryo li... 115 3e-036
gb|DT634913.1|DT634913 EST1149844 Normalized pine embryo li... 115 3e-036
gb|CO159502.1|CO159502 FLD1_14_B02.b1_A029 Root flooded Pin... 88 3e-036
gb|CO164764.1|CO164764 FLD1_50_D08.b1_A029 Root flooded Pin... 93 3e-036
gb|DR180204.1|DR180204 RTMNUT1_27_D03.b1_A029 Roots minus m... 74 4e-036
gb|DR094742.1|DR094742 STRR1_16_B03.g1_A033 Stem Response R... 147 4e-036
gb|DR018090.1|DR018090 STRS1_20_A04.g1_A034 Shoot tip pitch... 72 5e-036
gb|CF399981.1|CF399981 RTWW1_2_D06.g1_A015 Well-watered lob... 147 5e-036
gb|CF401839.1|CF401839 RTWW1_15_D02.g1_A015 Well-watered lo... 147 5e-036
>gb|DT634196.1|DT634196 EST1149127 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG334 3' end, mRNA sequence
Length = 937
Score = 281 bits (607), Expect(2) = 2e-091
Identities = 119/193 (61%), Positives = 139/193 (72%)
Frame = +2 / +1
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FY SCP E +V+ V +I +A++LLR HFHDCFVRGCDAS+LLN+T + AEK
Sbjct: 211 FYIKSCPGVEGLVRQLVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 390
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNLT+RGF ID +KA +E +CPGVVSCADIVALAARD+V GGPFW V TGRRDG
Sbjct: 391 DAIPNLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAVFARGGPFWQVKTGRRDG 570
Query: 539 TVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNF 718
+S++ EAL IPAPT NF QL SF K LN+ DLV LSGAHTIG+S C+ FS RLY F
Sbjct: 571 RISVESEALSNIPAPTFNFQQLKDSFARKGLNVQDLVVLSGAHTIGMSHCSFFSNRLYTF 750
Query: 719 TGHGGPDDADPSL 757
GG D SL
Sbjct: 751 GRSGGMDPTLESL 789
Score = 165 bits (354), Expect = 9e-040
Identities = 91/180 (50%), Positives = 107/180 (59%)
Frame = -3 / -3
Query: 732 PPCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASC 553
PP K+Y LK+L ++PIV AP+S T+S L L K+ S K VGAG+ +AS
Sbjct: 764 PPLRPKVYSLLLKKLQCDIPIVCAPDSTTKS*TLSPLRAKESLSC*KLNVGAGMLDNASL 585
Query: 552 LMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVR 373
D +PS PV T QNGPP+ T SRAA ATMSA +TTPGH S AL S+ PR+VR
Sbjct: 584 STDILPSLRPVFTCQNGPPLAKTASRAARATMSAHETTPGHLSSICALTWSITSNPRTVR 405
Query: 372 LGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
LG ASFSA L V S+DASQPLTKQSWK R A + M FT T S GQ
Sbjct: 404 LGIASFSALLFCVEFKSSDASQPLTKQSWKCSLKREAAIV*SAAMYLFTSCRTRPSTPGQ 225
Score = 77.1 bits (162), Expect(2) = 2e-091
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2 / +1
Query: 746 DPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAA 913
DP+L+ LYA L+++CK LTDN + VEMDPGS FD Y+ + RGLFQSDAA
Sbjct: 769 DPTLESLYAQLLKMQCKNLTDNISKVEMDPGSSLAFDSHYFGNLELNRGLFQSDAA 936
>gb|DR682788.1|DR682788 EST1072863 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC22 3' end, mRNA sequence
Length = 775
Score = 277 bits (600), Expect(2) = 2e-090
Identities = 116/187 (62%), Positives = 138/187 (73%)
Frame = +2 / +2
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FY SCP E +V+ V +I +A++LLR HFHDCFVRGCDAS+LLN+T + AEK
Sbjct: 50 FYMKSCPGVEGLVRQVVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 229
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNLT+RGF ID +KA +E +CPGVVSCADIVALAARD+ GGPFW V TGRRDG
Sbjct: 230 DAIPNLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAGFARGGPFWQVKTGRRDG 409
Query: 539 TVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNF 718
+S++ EAL IPAPT NF QL SF +K LN+ DLV LSGAHTIG+S C+ FS RLY+F
Sbjct: 410 RISVESEALSNIPAPTFNFQQLKDSFASKGLNVQDLVVLSGAHTIGMSHCSFFSNRLYSF 589
Query: 719 TGHGGPD 739
GG D
Sbjct: 590 GRSGGMD 610
Score = 165 bits (354), Expect = 9e-040
Identities = 91/180 (50%), Positives = 106/180 (58%)
Frame = -3 / -2
Query: 732 PPCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASC 553
PP KLY LK+L ++PIV AP+S T+S L L K+ S K VGAG+ +AS
Sbjct: 603 PPLRPKLYSLLLKKLQCDIPIVCAPDSTTKS*TLSPLLAKESLSC*KLNVGAGMLDNASL 424
Query: 552 LMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVR 373
D +PS PV T QNGPP+ SRAA ATMSA +TTPGH S AL S+ PR+VR
Sbjct: 423 STDILPSLRPVFTCQNGPPLAKPASRAARATMSAHETTPGHLSSICALTWSITSNPRTVR 244
Query: 372 LGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
LG ASFSA L V S+DASQPLTKQSWK R A + M FT T S GQ
Sbjct: 243 LGIASFSALLFCVEFKSSDASQPLTKQSWKCSLKREAAIV*SAAMYLFTTCRTRPSTPGQ 64
Score = 76.7 bits (161), Expect(2) = 2e-090
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAA 913
DP+L+ LYA L+++CK LTDN + VEMDPGS FD Y+ + RGLFQSDAA
Sbjct: 608 DPTLENLYAQLLKMQCKNLTDNISKVEMDPGSSLAFDSHYFGNLELNRGLFQSDAA 775
>gb|CF663228.1|CF663228 RTCNT1_1_C11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_1_C11_A029 5', mRNA sequence
Length = 824
Score = 215 bits (463), Expect(4) = 2e-089
Identities = 88/130 (67%), Positives = 105/130 (80%)
Frame = +2 / +1
Query: 350 AEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGR 529
AEKDA PN +LRGF ID +KA +EK CPGVVSCADI+AL ARD+V ++GGPFW+VPTGR
Sbjct: 283 AEKDALPNQSLRGFQIIDTVKAAVEKVCPGVVSCADILALVARDAVHMLGGPFWNVPTGR 462
Query: 530 RDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERL 709
RDG VSIK+EAL ++P PT+NF+QL F + L++ DLV LSGAHTIGIS C+SFS RL
Sbjct: 463 RDGVVSIKKEALAKLPPPTVNFSQLTSIFASNGLDVKDLVVLSGAHTIGISHCSSFSNRL 642
Query: 710 YNFTGHGGPD 739
YNFTG G D
Sbjct: 643 YNFTGKGDMD 672
Score = 143 bits (306), Expect(2) = 4e-037
Identities = 70/127 (55%), Positives = 82/127 (64%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PVKL R LKEL W++PIV AP+ TRS R L SW KF VG G + AS L
Sbjct: 662 PFPVKL*SRLLKELQWDIPIVWAPDKTTRSLTSRPLLANIDVSWEKFTVGGGSLARASFL 483
Query: 549 MDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVRL 370
+DT PS PVGT QNGPP T SRA SA +SA DTTPGH+FS++AL S+ P +
Sbjct: 482 IDTTPSLRPVGTFQNGPPNIWTASRATSARISAHDTTPGHTFSTAALTVSIIWNPLRL*F 303
Query: 369 GAASFSA 349
G+ASFSA
Sbjct: 302 GSASFSA 282
Score = 79.4 bits (167), Expect(4) = 2e-089
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +2 / +3
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L FY+ +CP V + V +I P +A+ LLR HFHDCFVRGCD SVLLN+T +
Sbjct: 99 LSLNFYEKTCPGVNNAVTNVVGQYISKNPTLAAPLLRLHFHDCFVRGCDGSVLLNSTNST 278
Query: 347 EAEKDAA 367
+ K A
Sbjct: 279 XSRKGCA 299
Score = 53.3 bits (110), Expect(4) = 2e-089
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +1
Query: 815 TIVEMDPGSFRTFDLSYYRGVLKRRGLFQ 901
T VEMDPGSFRTFD YY ++K +GLFQ
Sbjct: 736 TTVEMDPGSFRTFDKHYYTNLMKHKGLFQ 822
Score = 40.9 bits (83), Expect(4) = 2e-089
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSL+ YAAKL+L+CK NTT+
Sbjct: 655 GKGDMDPSLNKHYAAKLKLQCKPGYKNTTV 744
Score = 33.1 bits (66), Expect(2) = 4e-037
Identities = 22/48 (45%), Positives = 23/48 (47%)
Frame = -3 / -2
Query: 336 VALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
V STD SQPLTKQS K SR A G M T +T GQ
Sbjct: 268 VEFKSTDPSQPLTKQS*KCNLSRGAARVGFLDMYCPTTFVTALLTPGQ 125
>gb|CO161327.1|CO161327 FLD1_28_C11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_C11_A029 3', mRNA sequence
Length = 812
Score = 290 bits (627), Expect(2) = 1e-082
Identities = 119/187 (63%), Positives = 142/187 (75%)
Frame = +2 / -2
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FYD +CP A V++ V +I AP +A+ LLR HFHDCFVRGCD SVLLN+T ++AEK
Sbjct: 634 FYDKTCPAAYSAVENVVGEYISKAPSLAAPLLRMHFHDCFVRGCDGSVLLNSTNSTKAEK 455
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNL+LRGF ID KA +EK CPGVVSCADIVAL ARD V ++GGPFW+VPTGRRDG
Sbjct: 454 DAFPNLSLRGFQVIDAAKAAVEKICPGVVSCADIVALVARDGVHMLGGPFWTVPTGRRDG 275
Query: 539 TVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNF 718
VSI+ EAL ++PAPT NF+QL F + L++ DLV LSGAHTIG+S C SF+ RLY F
Sbjct: 274 VVSIENEALTKLPAPTANFSQLTSIFASNGLDVQDLVVLSGAHTIGVSHCTSFTNRLYRF 95
Query: 719 TGHGGPD 739
TG G D
Sbjct: 94 TGKGDMD 74
Score = 160 bits (343), Expect = 3e-038
Identities = 89/179 (49%), Positives = 102/179 (56%)
Frame = -3 / +3
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PV L R +KE+ WE PIV AP+ TRS R L S KF VGAG AS
Sbjct: 84 PFPVNL*SRLVKEVQWETPIVWAPDKTTRS*TSRPLLANIDVSCEKFAVGAGSLVRASFS 263
Query: 549 MDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVRL 370
+DT PS PVGT+QNGPP T S A AT+SA DTTPGH FS++AL SM P +R
Sbjct: 264 IDTTPSLRPVGTVQNGPPNIWTPSLATRATISAHDTTPGHIFSTAALAASMTWNPLRLRF 443
Query: 369 GAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
G ASFSA + V STD SQPLTKQS K + A GA + + T T A GQ
Sbjct: 444 GNASFSAFVEFVEFKSTDPSQPLTKQS*KCILRSGAARDGALDIYSPTTFSTAL*AAGQ 620
Score = 38.2 bits (77), Expect(2) = 1e-082
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / -2
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSLD YAA L++KCK + T +
Sbjct: 91 GKGDMDPSLDKYYAAHLKIKCKPGDNTTIV 2
>gb|DR164099.1|DR164099 RTFE1_46_G03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_G03_A029 5', mRNA sequence
Length = 860
Score = 144 bits (310), Expect(3) = 6e-081
Identities = 61/103 (59%), Positives = 73/103 (70%)
Frame = +2 / +1
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FY +CP AE +K +I +A+ LLR HFHDCFVRGCD SVLLN+T + AEK
Sbjct: 76 FYKTTCPSAESTIKRVATKYIKKDKTLAAPLLRMHFHDCFVRGCDGSVLLNSTQNNTAEK 255
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSV 487
A PNL+LRGF ID K+ LE+ CPGVVSCADIV+L ARD+V
Sbjct: 256 AAIPNLSLRGFDVIDAAKSELEEICPGVVSCADIVSLVARDAV 384
Score = 105 bits (225), Expect(3) = 6e-081
Identities = 46/80 (57%), Positives = 51/80 (63%)
Frame = +2 / +1
Query: 500 GPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGI 679
G W V TGRRDG VS E L IP+P NF+QL F K L++ DLV LSG HTIG+
Sbjct: 403 GVSWPVKTGRRDGRVSNVSEVLSNIPSPFFNFSQLNAFFAAKGLSIEDLVVLSGGHTIGV 582
Query: 680 SQCNSFSERLYNFTGHGGPD 739
CN FS RLYNFTG G D
Sbjct: 583 GLCNFFSNRLYNFTGKGDMD 642
Score = 90.9 bits (192), Expect(3) = 6e-081
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2 / +1
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDA 910
G D DPSLD YA +L+ KC +L DNTT V MDP S FD YYR + RGLF SDA
Sbjct: 625 GKGDMDPSLDKSYAKELKTKCTSLADNTTTVPMDPRSSLNFDRHYYRTLESNRGLFLSDA 804
Query: 911 ALITDAASKA 940
L+TD+ SK+
Sbjct: 805 GLLTDSTSKS 834
Score = 75.3 bits (158), Expect(2) = 5e-023
Identities = 44/97 (45%), Positives = 53/97 (54%)
Frame = -3 / -1
Query: 486 TESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVRLGAASFSASLPPVALSSTDASQ 307
T SRA TMSA +TTPG S+S L S+ PR R G A+FSA L V + TD SQ
Sbjct: 383 TASRATRETMSAHETTPGQISSNSLLAASITSNPRRERFGIAAFSAVLFCVEFNRTDPSQ 204
Query: 306 PLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACG 196
PLTKQS K + R A ++ M L + SA G
Sbjct: 203 PLTKQS*KCILRRGAARVLSFFMYFVATLLIVLSAEG 93
Score = 53.8 bits (111), Expect(2) = 5e-023
Identities = 30/79 (37%), Positives = 40/79 (50%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PVKL LK+L PIV P+ T+S+ L K+ SW+K G G+ S
Sbjct: 632 PFPVKL*SLLLKKLQSPTPIVCPPDRTTKSSILSPFAAKNALSWLKLKKGEGMLLKTSLT 453
Query: 549 MDTVPSRLPVGTLQNGPPM 493
+DT+PS PV T P +
Sbjct: 452 LDTLPSLRPVFTGHETPAL 396
>gb|CF666432.1|CF666432 RTCNT1_23_F04.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_F04_A029 3', mRNA sequence
Length = 693
Score = 283 bits (613), Expect(2) = 8e-080
Identities = 117/187 (62%), Positives = 140/187 (74%)
Frame = +2 / -2
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FYD +CP A V++ + +I AP +A+ LLR HFHDCFVRGCD SVLLN+T ++AEK
Sbjct: 617 FYDKTCPAAYIAVENVIGEYISKAPSLAAPLLRMHFHDCFVRGCDGSVLLNSTNSTKAEK 438
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNL+LRGF ID KA +E+ CPGVVSCADIVAL ARD V ++GGPFW+VP GRRDG
Sbjct: 437 DAFPNLSLRGFQVIDAAKAAVEEICPGVVSCADIVALVARDGVHMLGGPFWNVPMGRRDG 258
Query: 539 TVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNF 718
VSI EAL ++PAPT NF+QL F + L++ DLV LSGAHTI +S C SFS RLYNF
Sbjct: 257 VVSIANEALTKLPAPTANFSQLTSIFASNGLDVQDLVVLSGAHTIRVSHCTSFSNRLYNF 78
Query: 719 TGHGGPD 739
TG G D
Sbjct: 77 TGEGDMD 57
Score = 155 bits (333), Expect = 7e-037
Identities = 84/161 (52%), Positives = 94/161 (58%)
Frame = -3 / +1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PVKL R LKE+ WE IV AP+ TRS R L S KF VGAG AS
Sbjct: 67 PSPVKL*SRLLKEVQWETLIVWAPDKTTRS*TSRPLLANIDVSCEKFAVGAGSLVRASFA 246
Query: 549 MDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVRL 370
+DT PS P+GT QNGPP T S A SAT+SA DTTPGH S++AL SM P +R
Sbjct: 247 IDTTPSLRPIGTFQNGPPNIWTPSLATSATISAHDTTPGHISSTAALAASMTWNPLRLRF 426
Query: 369 GAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGA 247
G ASFSA + V STD SQPLTKQS K + A GA
Sbjct: 427 GNASFSAFVEFVEFKSTDPSQPLTKQS*KCILRSGAARDGA 549
Score = 35.4 bits (71), Expect(2) = 8e-080
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 731 GPDDADPSLDPLYAAKLRLKCK 796
G D DPSLD YAA L++KC+
Sbjct: 74 GEGDMDPSLDKYYAAHLKIKCQ 9
>gb|CO161405.1|CO161405 FLD1_28_C11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_C11_A029 5', mRNA sequence
Length = 832
Score = 192 bits (414), Expect(4) = 2e-077
Identities = 79/119 (66%), Positives = 92/119 (77%)
Frame = +2 / -1
Query: 383 RGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSIKQEA 562
RGF ID KA +EK CPGVVSCADIVAL ARD V ++GGPFW+VPTGRRDG VSI+ EA
Sbjct: 832 RGFQVIDAAKAAVEKICPGVVSCADIVALVARDGVHMLGGPFWTVPTGRRDGVVSIENEA 653
Query: 563 LDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
L ++PAPT NF+QL F + L++ DLV LSGAHTIG+S C SF+ RLYNFTG G D
Sbjct: 652 LTKLPAPTANFSQLTSIFASNGLDVQDLVVLSGAHTIGVSHCTSFTNRLYNFTGKGDMD 476
Score = 120 bits (257), Expect = 2e-026
Identities = 62/115 (53%), Positives = 70/115 (60%)
Frame = -3 / +3
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PVKL R +KE+ WE PIV AP+ TRS R L S KF VGAG AS
Sbjct: 486 PFPVKL*SRLVKEVQWETPIVWAPDKTTRS*TSRPLLANIDVSCEKFAVGAGSLVRASFS 665
Query: 549 MDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKP 385
+DT PS PVGT+QNGPP T S A AT+SA DTTPGH FS++AL SM P
Sbjct: 666 IDTTPSLRPVGTVQNGPPNIWTPSLATRATISAHDTTPGHIFSTAALAASMTWNP 830
Score = 71.6 bits (150), Expect(4) = 2e-077
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2 / -1
Query: 806 DNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAASKA 940
DNTTIVEMDPGS R FD YY + RRGLFQSDAAL+T+ ++A
Sbjct: 421 DNTTIVEMDPGSSRIFDTHYYMNLKARRGLFQSDAALLTNNEAQA 287
Score = 46.0 bits (94), Expect(4) = 2e-077
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -1
Query: 956 INAPPEVFFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
I FF F SM KMG I V TGS G+IR+ CA +N
Sbjct: 277 IELQASTFFSDFGMSMEKMGRIGVLTGSAGQIRRRCAFIN 158
Score = 38.2 bits (77), Expect(4) = 2e-077
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSLD YAA L++KCK + T +
Sbjct: 493 GKGDMDPSLDKYYAAHLKIKCKPGDNTTIV 404
>gb|DT633972.1|DT633972 EST1148903 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG076 3' end, mRNA sequence
Length = 820
Score = 281 bits (607), Expect(2) = 5e-076
Identities = 119/193 (61%), Positives = 139/193 (72%)
Frame = +2 / +2
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FY SCP E +V+ V +I +A++LLR HFHDCFVRGCDAS+LLN+T + AEK
Sbjct: 215 FYIKSCPGVEGLVRQLVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 394
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNLT+RGF ID +KA +E +CPGVVSCADIVALAARD+V GGPFW V TGRRDG
Sbjct: 395 DAIPNLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAVFARGGPFWQVKTGRRDG 574
Query: 539 TVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNF 718
+S++ EAL IPAPT NF QL SF K LN+ DLV LSGAHTIG+S C+ FS RLY F
Sbjct: 575 RISVESEALSNIPAPTFNFQQLKDSFARKGLNVQDLVVLSGAHTIGMSHCSFFSNRLYTF 754
Query: 719 TGHGGPDDADPSL 757
GG D SL
Sbjct: 755 GRSGGMDPTLESL 793
Score = 165 bits (354), Expect = 9e-040
Identities = 91/180 (50%), Positives = 107/180 (59%)
Frame = -3 / -2
Query: 732 PPCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASC 553
PP K+Y LK+L ++PIV AP+S T+S L L K+ S K VGAG+ +AS
Sbjct: 768 PPLRPKVYSLLLKKLQCDIPIVCAPDSTTKS*TLSPLRAKESLSC*KLNVGAGMLDNASL 589
Query: 552 LMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVR 373
D +PS PV T QNGPP+ T SRAA ATMSA +TTPGH S AL S+ PR+VR
Sbjct: 588 STDILPSLRPVFTCQNGPPLAKTASRAARATMSAHETTPGHLSSICALTWSITSNPRTVR 409
Query: 372 LGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
LG ASFSA L V S+DASQPLTKQSWK R A + M FT T S GQ
Sbjct: 408 LGIASFSALLFCVEFKSSDASQPLTKQSWKCSLKREAAIV*SAAMYLFTSCRTRPSTPGQ 229
Score = 25.4 bits (49), Expect(2) = 5e-076
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKC 793
DP+L+ LYA L+++C
Sbjct: 773 DPTLESLYAQLLKMQC 820
>gb|CF665386.1|CF665386 RTCNT1_15_E09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_E09_A029 5', mRNA sequence
Length = 636
Score = 215 bits (463), Expect(3) = 2e-075
Identities = 89/136 (65%), Positives = 105/136 (77%)
Frame = +2 / +2
Query: 332 ATGGSEAEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFW 511
+T ++AEKDA PNL+LRGF ID KA +E+ CPGVVSCADIVAL ARD V ++GGPFW
Sbjct: 2 STNSTKAEKDAFPNLSLRGFQVIDAAKAAVEEICPGVVSCADIVALVARDGVHMLGGPFW 181
Query: 512 SVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCN 691
+VPTGRRDG VSI EAL ++PAPT NF+QL F + L++ DLV LSGAHTIG+S C
Sbjct: 182 NVPTGRRDGVVSIANEALTKLPAPTANFSQLTSIFASNGLDVQDLVVLSGAHTIGVSHCT 361
Query: 692 SFSERLYNFTGHGGPD 739
SFS RLYNFTG G D
Sbjct: 362 SFSNRLYNFTGKGDMD 409
Score = 133 bits (286), Expect = 2e-030
Identities = 70/127 (55%), Positives = 77/127 (60%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PVKL R LKE+ WE PIV AP+ TRS R L S KF VGAG AS
Sbjct: 399 PFPVKL*SRLLKEVQWETPIVWAPDKTTRS*TSRPLLANIDVSCEKFAVGAGSLVRASFA 220
Query: 549 MDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVRL 370
+DT PS PVGT QNGPP T S A SAT+SA DTTPGH S++AL SM P +R
Sbjct: 219 IDTTPSLRPVGTFQNGPPNIWTPSLATSATISAHDTTPGHISSTAALAASMTWNPLRLRF 40
Query: 369 GAASFSA 349
G ASFSA
Sbjct: 39 GNASFSA 19
Score = 71.6 bits (150), Expect(3) = 2e-075
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2 / +2
Query: 806 DNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAASKA 940
DNTTIVEMDPGS R FD YY + RRGLFQSDAAL+T+ ++A
Sbjct: 464 DNTTIVEMDPGSSRIFDTHYYMNLKARRGLFQSDAALLTNNEAQA 598
Score = 36.8 bits (74), Expect(3) = 2e-075
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSLD YAA L++KC+ + T +
Sbjct: 392 GKGDMDPSLDKYYAAHLKIKCQAGDNTTIV 481
>gb|DR687518.1|DR687518 EST1077600 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABT46 3' end, mRNA sequence
Length = 773
Score = 280 bits (605), Expect = 2e-074
Identities = 117/187 (62%), Positives = 137/187 (73%)
Frame = +2 / +2
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FY SCP E +V+ V +I +A++LLR HFHDCFVRGCDAS+LLN+T + AEK
Sbjct: 203 FYIKSCPGVEGLVRQLVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 382
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNLT+RGF ID +KA +E +CPGVVSCADIVALAARD+V GGPFW V TGRRDG
Sbjct: 383 DAIPNLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAVFARGGPFWQVKTGRRDG 562
Query: 539 TVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNF 718
+S++ EAL IPAPT NF QL SF K LN+ DLV LSGAHTIG+S C+ FS RLY F
Sbjct: 563 RISVESEALSNIPAPTFNFQQLKDSFARKGLNVQDLVVLSGAHTIGMSHCSFFSNRLYTF 742
Query: 719 TGHGGPD 739
GG D
Sbjct: 743 GRSGGMD 763
Score = 165 bits (354), Expect = 9e-040
Identities = 91/180 (50%), Positives = 107/180 (59%)
Frame = -3 / -3
Query: 732 PPCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASC 553
PP K+Y LK+L ++PIV AP+S T+S L L K+ S K VGAG+ +AS
Sbjct: 756 PPLRPKVYSLLLKKLQCDIPIVCAPDSTTKS*TLSPLRAKESLSC*KLNVGAGMLDNASL 577
Query: 552 LMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVR 373
D +PS PV T QNGPP+ T SRAA ATMSA +TTPGH S AL S+ PR+VR
Sbjct: 576 STDILPSLRPVFTCQNGPPLAKTASRAARATMSAHETTPGHLSSICALTWSITSNPRTVR 397
Query: 372 LGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
LG ASFSA L V S+DASQPLTKQSWK R A + M FT T S GQ
Sbjct: 396 LGIASFSALLFCVEFKSSDASQPLTKQSWKCSLKREAAIV*SAAMYLFTSCRTRPSTPGQ 217
>gb|CV033874.1|CV033874 RTNACL1_37_D06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_D06_A029 3', mRNA sequence
Length = 823
Score = 184 bits (397), Expect(4) = 5e-074
Identities = 76/114 (66%), Positives = 88/114 (77%)
Frame = +2 / +2
Query: 398 IDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSIKQEALDQIP 577
ID KA +E+ CPGVVSCADIVAL ARD V ++GGPFW+VPTGRRDG VSI EAL ++P
Sbjct: 5 IDAAKAAVEEICPGVVSCADIVALVARDGVHMLGGPFWNVPTGRRDGVVSIANEALTKLP 184
Query: 578 APTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
APT NF+QL F + L++ DLV LSGAHTIG+S C SFS RLYNFTG G D
Sbjct: 185 APTANFSQLTSIFASNGLDVQDLVVLSGAHTIGVSHCTSFSNRLYNFTGKGDMD 346
Score = 119 bits (255), Expect = 4e-026
Identities = 62/111 (55%), Positives = 68/111 (61%)
Frame = -3 / -2
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PVKL R LKE+ WE PIV AP+ TRS R L S KF VGAG AS
Sbjct: 336 PFPVKL*SRLLKEVQWETPIVWAPDKTTRS*TSRPLLANIDVSCEKFAVGAGSLVRASFA 157
Query: 549 MDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSM 397
+DT PS PVGT QNGPP T S A SAT+SA DTTPGH S++AL SM
Sbjct: 156 IDTTPSLRPVGTFQNGPPNIWTPSLATSATISAHDTTPGHISSTAALAASM 4
Score = 71.6 bits (150), Expect(4) = 5e-074
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2 / +2
Query: 806 DNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAASKA 940
DNTTIVEMDPGS R FD YY + RRGLFQSDAAL+T+ ++A
Sbjct: 401 DNTTIVEMDPGSSRIFDTHYYMNLKARRGLFQSDAALLTNNEAQA 535
Score = 46.0 bits (94), Expect(4) = 5e-074
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / +2
Query: 956 INAPPEVFFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
I FF F SM KMG I V TGS G+IR+ CA +N
Sbjct: 545 IELQASTFFSDFGMSMEKMGRIGVLTGSAGQIRRRCAFIN 664
Score = 34.5 bits (69), Expect(4) = 5e-074
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSLD YA L++KC+ + T +
Sbjct: 329 GKGDMDPSLDKYYAPHLKIKCQAGDNTTIV 418
>gb|DR682208.1|DR682208 EST1072283 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA827 3' end, mRNA sequence
Length = 789
Score = 277 bits (600), Expect = 1e-073
Identities = 116/187 (62%), Positives = 138/187 (73%)
Frame = +2 / +2
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FY SCP E +V+ V +I +A++LLR HFHDCFVRGCDAS+LLN+T + AEK
Sbjct: 203 FYMKSCPGVEGLVRQVVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 382
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNLT+RGF ID +KA +E +CPGVVSCADIVALAARD+ GGPFW V TGRRDG
Sbjct: 383 DAIPNLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAGFARGGPFWQVKTGRRDG 562
Query: 539 TVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNF 718
+S++ EAL IPAPT NF QL SF +K LN+ DLV LSGAHTIG+S C+ FS RLY+F
Sbjct: 563 RISVESEALSNIPAPTFNFQQLKDSFASKGLNVQDLVVLSGAHTIGMSHCSFFSNRLYSF 742
Query: 719 TGHGGPD 739
GG D
Sbjct: 743 GRSGGMD 763
Score = 165 bits (354), Expect = 9e-040
Identities = 91/180 (50%), Positives = 106/180 (58%)
Frame = -3 / -1
Query: 732 PPCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASC 553
PP KLY LK+L ++PIV AP+S T+S L L K+ S K VGAG+ +AS
Sbjct: 756 PPLRPKLYSLLLKKLQCDIPIVCAPDSTTKS*TLSPLLAKESLSC*KLNVGAGMLDNASL 577
Query: 552 LMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVR 373
D +PS PV T QNGPP+ SRAA ATMSA +TTPGH S AL S+ PR+VR
Sbjct: 576 STDILPSLRPVFTCQNGPPLAKPASRAARATMSAHETTPGHLSSICALTWSITSNPRTVR 397
Query: 372 LGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
LG ASFSA L V S+DASQPLTKQSWK R A + M FT T S GQ
Sbjct: 396 LGIASFSALLFCVEFKSSDASQPLTKQSWKCSLKREAAIV*SAAMYLFTTCRTRPSTPGQ 217
>gb|DT634565.1|DT634565 EST1149496 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG736 3' end, mRNA sequence
Length = 739
Score = 252 bits (544), Expect(2) = 3e-072
Identities = 103/170 (60%), Positives = 128/170 (75%)
Frame = +2 / +2
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L FY+ +CP V + V +I P +A+ LLR HFHDCFVRGCD SVLLN+T +
Sbjct: 146 LSLNFYEKTCPGVNNAVTNVVGQYISKNPTLAAPLLRLHFHDCFVRGCDGSVLLNSTNST 325
Query: 347 EAEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTG 526
+AEKDA PN +LRGF ID +KA +EK CPGVVSCADI+AL ARD+V ++GGPFW+VPTG
Sbjct: 326 KAEKDALPNQSLRGFQIIDTVKAAVEKVCPGVVSCADILALVARDAVHMLGGPFWNVPTG 505
Query: 527 RRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIG 676
RRDG VSIK+EAL ++P PT+NF+QL F + L++ DLV LSGAHTIG
Sbjct: 506 RRDGVVSIKKEALAKLPPPTVNFSQLTSIFASNGLDVKDLVVLSGAHTIG 655
Score = 145 bits (311), Expect(2) = 3e-037
Identities = 81/161 (50%), Positives = 93/161 (57%)
Frame = -3 / -2
Query: 675 PIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCLMDTVPSRLPVGTLQNGPP 496
PIV AP+ TRS R L SW KF VG G + AS L+DT PS PVGT QNGPP
Sbjct: 654 PIVWAPDKTTRSLTSRPLLANIDVSWEKFTVGGGSLARASFLIDTTPSLRPVGTFQNGPP 475
Query: 495 MTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRSVRLGAASFSASLPPVALSSTD 316
T SRA SA +SA DTTPGH+FS++AL S+ P + G+ASFSA + V STD
Sbjct: 474 NMWTASRATSARISAHDTTPGHTFSTAALTVSIIWNPLRL*FGSASFSALVEFVEFKSTD 295
Query: 315 ASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACGQ 193
SQPLTKQS K SR A G M T +T GQ
Sbjct: 294 PSQPLTKQS*KCNLSRGAARVGFLDMYCPTTFVTALLTPGQ 172
Score = 41.8 bits (85), Expect(2) = 3e-072
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 674 GISQCNSFSERLYNFTGHGGPD 739
GIS C+SFS RLYNFTG G D
Sbjct: 654 GISHCSSFSNRLYNFTGKGDMD 719
Score = 31.3 bits (62), Expect(2) = 3e-037
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMP 673
P PVKL R LKEL W++P
Sbjct: 709 PFPVKL*SRLLKELQWDIP 653
>gb|CF665306.1|CF665306 RTCNT1_15_E09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_E09_A029 3', mRNA sequence
Length = 818
Score = 175 bits (377), Expect(4) = 6e-072
Identities = 71/103 (68%), Positives = 81/103 (78%)
Frame = +2 / +1
Query: 431 CPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQ 610
CPGVVSCADIVAL ARD V ++GGPFW+VPTGRRDG VSI EAL ++PAPT NF+QL
Sbjct: 4 CPGVVSCADIVALVARDGVHMLGGPFWNVPTGRRDGVVSIANEALTKLPAPTANFSQLTS 183
Query: 611 SFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
F + L++ DLV LSGAHTIG+S C SFS RLYNFTG G D
Sbjct: 184 IFASNGLDVQDLVVLSGAHTIGVSHCTSFSNRLYNFTGKGDMD 312
Score = 111 bits (238), Expect = 9e-024
Identities = 57/100 (57%), Positives = 61/100 (61%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P PVKL R LKE+ WE PIV AP+ TRS R L S KF VGAG AS
Sbjct: 302 PFPVKL*SRLLKEVQWETPIVWAPDKTTRS*TSRPLLANIDVSCEKFAVGAGSLVRASFA 123
Query: 549 MDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGH 430
+DT PS PVGT QNGPP T S A SAT+SA DTTPGH
Sbjct: 122 IDTTPSLRPVGTFQNGPPNIWTPSLATSATISAHDTTPGH 3
Score = 71.6 bits (150), Expect(4) = 6e-072
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2 / +1
Query: 806 DNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAASKA 940
DNTTIVEMDPGS R FD YY + RRGLFQSDAAL+T+ ++A
Sbjct: 367 DNTTIVEMDPGSSRIFDTHYYMNLKARRGLFQSDAALLTNNEAQA 501
Score = 46.0 bits (94), Expect(4) = 6e-072
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / +1
Query: 956 INAPPEVFFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
I FF F SM KMG I V TGS G+IR+ CA +N
Sbjct: 511 IELQASTFFSDFGMSMEKMGRIGVLTGSAGQIRRRCAFIN 630
Score = 36.8 bits (74), Expect(4) = 6e-072
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSLD YAA L++KC+ + T +
Sbjct: 295 GKGDMDPSLDKYYAAHLKIKCQAGDNTTIV 384
>gb|CO161849.1|CO161849 FLD1_31_C06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_C06_A029 5', mRNA sequence
Length = 888
Score = 106 bits (227), Expect(5) = 1e-066
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +2 / +2
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W+VP GRRDG +S+ E L IPAPT N +QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 365 WNVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVSHC 544
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 545 TSFVTRLYNFS 577
Score = 93.2 bits (197), Expect(5) = 1e-066
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +2 / +2
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFYDYSCP+AE V + V+ ++ +VA L+R HFHDCFVRGCD SVL+++T + AE
Sbjct: 17 GFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNTAE 196
Query: 356 KDAAPN 373
KD+ N
Sbjct: 197 KDSIVN 214
Score = 54.7 bits (113), Expect(5) = 1e-066
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +2 / +2
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF ID K+ LE CP VSCADIVA AARDS
Sbjct: 215 NPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDS 328
Score = 44.1 bits (90), Expect(5) = 1e-066
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2 / +2
Query: 803 TDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
++N T V MD + T D YY G+L + GLF SD AL+TD
Sbjct: 656 SNNITTVFMDIITPETLDNLYYDGLLNKHGLFTSDVALLTD 778
Score = 31.3 bits (62), Expect(5) = 1e-066
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YAA L+ KC
Sbjct: 593 DPSLDPKYAALLKEKC 640
>gb|DR177119.1|DR177119 RTMNUT1_3_F08.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_F08_A029 3', mRNA sequence
Length = 689
Score = 186 bits (401), Expect(2) = 2e-066
Identities = 81/134 (60%), Positives = 94/134 (70%)
Frame = +2 / -2
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L FY CP AE V+ VK +I +A+ LLR HFHDCFVRGCD SVLLN+T +
Sbjct: 601 LSYDFYKSRCPSAESTVEKVVKKYIKKDQTLAAPLLRMHFHDCFVRGCDGSVLLNSTKKN 422
Query: 347 EAEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTG 526
AEKDA PNL+LRGF ID KA LEK CPGVVSCADIV+LAARD+V GP+W+V TG
Sbjct: 421 PAEKDAIPNLSLRGFEVIDDAKAELEKICPGVVSCADIVSLAARDAVVASKGPYWAVKTG 242
Query: 527 RRDGTVSIKQEALD 568
RRDG +S E L+
Sbjct: 241 RRDGRISKANEVLN 200
Score = 123 bits (264), Expect(2) = 1e-032
Identities = 65/122 (53%), Positives = 76/122 (62%)
Frame = -3 / +3
Query: 558 SCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPRS 379
S +D +PS PV T Q GP + T SRAAS TMSAQDTTPGH FS+SAL S+ PR
Sbjct: 210 SFALDILPSLRPVFTAQYGPLLATTASRAASETMSAQDTTPGHIFSNSALASSITSNPRR 389
Query: 378 VRLGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSAC 199
+RLG ASFSA V + TD SQPLTKQS K + R A ++ M FT T+ SA
Sbjct: 390 LRLGIASFSAGFFFVEFNRTDPSQPLTKQS*KCILRRGAARV*SFFMYFFTTFSTVLSAD 569
Query: 198 GQ 193
GQ
Sbjct: 570 GQ 575
Score = 88.1 bits (186), Expect(2) = 2e-066
Identities = 36/58 (62%), Positives = 40/58 (68%)
Frame = +2 / -2
Query: 566 DQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
+ +P P +F L SF K LN+ DLV LSGAHTIGI CNSFS RLYNFTG GG D
Sbjct: 199 NNLPFPVFDFADLKASFARKGLNVKDLVVLSGAHTIGIGHCNSFSNRLYNFTGKGGMD 26
Score = 37.3 bits (75), Expect(2) = 1e-032
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = -3 / +3
Query: 732 PPCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAG 574
PP PVKL L EL +PIV AP+ TRS L L K+ K G G
Sbjct: 33 PPFPVKL*SLLLNELQ*PIPIVWAPDRTTRSLTLSPLRAKEALRSAKSKTGKG 191
>gb|CO165064.1|CO165064 FLD1_52_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_D01_A029 3', mRNA sequence
Length = 912
Score = 156 bits (335), Expect(4) = 2e-064
Identities = 69/127 (54%), Positives = 85/127 (66%)
Frame = +2 / -1
Query: 350 AEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGR 529
AE+D+ PNLTL F ID IK+ LEK CPGVVSCADI+ALAARD+V GGP W+V GR
Sbjct: 777 AERDSIPNLTLSQFDVIDEIKSNLEKACPGVVSCADILALAARDAVLQSGGPTWAVEMGR 598
Query: 530 RDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERL 709
RDG S +A+ +P+ N L+ SF + L++ DLV LSGAHT G S C++ S RL
Sbjct: 597 RDGLTSRSSDAISHLPSSRSNAQALIDSFSSNGLSIRDLVTLSGAHTFGKSHCSTVSWRL 418
Query: 710 YNFTGHG 730
Y T G
Sbjct: 417 YGPTKGG 397
Score = 56.5 bits (117), Expect(4) = 2e-064
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2 / -1
Query: 746 DPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
DP+L+ YA L +C + + +DP + FD +Y++ +L+ G+F SD+AL+ D
Sbjct: 393 DPTLNKTYAVGLMNQCTLPINANATIPLDPSTPNIFDKNYFQDLLQNEGIFASDSALVID 214
Query: 926 AASKADILSVIN 961
+ +K + N
Sbjct: 213 SRTKVFVTEYAN 178
Score = 49.2 bits (101), Expect(4) = 2e-064
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 227 VKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLL 328
V H+ + + ++R FHDCFVRGCDASVLL
Sbjct: 897 VNKHLKQDNTIGAPIVRMFFHDCFVRGCDASVLL 796
Score = 42.3 bits (86), Expect(4) = 2e-064
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 977 FFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVNKH 1081
F F +M+++G +++ TG +GEIRK C VN +
Sbjct: 165 FRDQFGYAMIRLGRVQILTGQQGEIRKRCGFVNSN 61
>gb|DR057895.1|DR057895 RTNIT1_8_A09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_A09_A029 5', mRNA sequence
Length = 810
Score = 180 bits (387), Expect(3) = 1e-062
Identities = 70/127 (55%), Positives = 93/127 (73%)
Frame = +2 / +3
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L+ GFY+ +C QAE IV+ + +H + + LLR HFHDCFV+GCD S+L+++ G +
Sbjct: 24 LQVGFYNTNCSQAESIVRGVITSHFATDKSLPAALLRMHFHDCFVKGCDGSILIDSVGNN 203
Query: 347 EAEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTG 526
+EK+A PNLT+RGF ID K LE CPGVVSCADIVALA RD+V + GGP +++PTG
Sbjct: 204 VSEKEAGPNLTVRGFEIIDEAKTKLESACPGVVSCADIVALATRDAVFLAGGPQYNLPTG 383
Query: 527 RRDGTVS 547
RRDG +S
Sbjct: 384 RRDGRIS 404
Score = 103 bits (219), Expect(2) = 7e-024
Identities = 52/103 (50%), Positives = 60/103 (58%)
Frame = -3 / -3
Query: 576 GIWSSASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSM 397
G S + D +PS LPVG L GPP T S ASAT+SA DTTPGH+ SS S+
Sbjct: 433 GPGKSTLSIEDILPSLLPVGRLYCGPPARNTASLVASATISAHDTTPGHALSSLVFASSI 254
Query: 396 KPKPRSVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVRSR 268
P +VRLG ASFS +L P D SQP TKQS K +R R
Sbjct: 253 ISNPLTVRLGPASFSDTLLPTLSIRIDPSQPFTKQS*KCMRRR 125
Score = 70.7 bits (148), Expect(3) = 1e-062
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = +2 / +3
Query: 572 IPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
+P P+ ++ +F NK L L D+V L GAHT+G++ C+ FS+RLYNF G G D
Sbjct: 423 LPGPSFQVSEAAAAFANKGLTLQDMVILLGAHTVGVAHCSFFSDRLYNFQGSGTAD 590
Score = 29.5 bits (58), Expect(3) = 1e-062
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTT 817
G ADPS+DP A L+ C + T ++T
Sbjct: 573 GSGTADPSMDPTLVATLKNICPSPTSSST 659
Score = 28.6 bits (56), Expect(2) = 7e-024
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -3 / -3
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLF 619
P P KL SLK+L P V AP T S +R LF
Sbjct: 580 PLP*KL*SLSLKKLQCATPTVCAPNRMTISWSVRPLF 470
>gb|CF479650.1|CF479650 RTWW3_11_F11.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_11_F11_A022 5', mRNA sequence
Length = 732
Score = 140 bits (301), Expect(4) = 1e-062
Identities = 58/92 (63%), Positives = 69/92 (75%)
Frame = +2 / -3
Query: 464 ALAARDSVGVIGGPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLAD 643
AL ARD+V ++GGPFW+VP GRRDG VSI EAL ++P PT NFT L F + L++ D
Sbjct: 730 ALVARDAVHMLGGPFWNVPMGRRDGVVSIANEALTKLPPPTANFTLLKSIFASNGLDVKD 551
Query: 644 LVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
LV LSGAHTIG S C+SFS RLYNFTG+G D
Sbjct: 550 LVVLSGAHTIGTSHCSSFSSRLYNFTGNGDMD 455
Score = 72.5 bits (152), Expect(4) = 1e-062
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +2 / -3
Query: 806 DNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAASKADILSVINAP 967
DN TIVEMDPGSFRTFD YY + KRRGLF SD AL++ + ++A + + + P
Sbjct: 400 DNKTIVEMDPGSFRTFDTHYYVNLKKRRGLFHSDDALLSSSEAEAYVNTELQFP 239
Score = 50.6 bits (104), Expect(4) = 1e-062
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +2 / -3
Query: 977 FFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
FF FA SM KMG I V TGS G+IR+HCA N
Sbjct: 235 FFSDFATSMQKMGTIGVLTGSAGQIRRHCAFTN 137
Score = 34.5 bits (69), Expect(4) = 1e-062
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / -3
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSLD YAA L++ CK + T +
Sbjct: 472 GNGDMDPSLDKNYAAHLKIACKPNDNKTIV 383
>gb|DR058106.1|DR058106 RTNIT1_9_F04.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_9_F04_A029 5', mRNA sequence
Length = 746
Score = 142 bits (304), Expect(4) = 5e-062
Identities = 57/88 (64%), Positives = 67/88 (76%)
Frame = +2 / -2
Query: 476 RDSVGVIGGPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWL 655
RD V ++GGPFW+VPTGRRDG VSI EAL ++PAPT NF+QL F + L++ DLV L
Sbjct: 745 RDGVHMLGGPFWNVPTGRRDGVVSIANEALTKLPAPTANFSQLTSIFASNGLDVQDLVVL 566
Query: 656 SGAHTIGISQCNSFSERLYNFTGHGGPD 739
SGAHTIG+S C SFS RLYNFTG G D
Sbjct: 565 SGAHTIGVSHCTSFSNRLYNFTGKGDMD 482
Score = 71.6 bits (150), Expect(4) = 5e-062
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2 / -2
Query: 806 DNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITDAASKA 940
DNTTIVEMDPGS R FD YY + RRGLFQSDAAL+T+ ++A
Sbjct: 427 DNTTIVEMDPGSSRIFDTHYYMNLKARRGLFQSDAALLTNNEAQA 293
Score = 46.0 bits (94), Expect(4) = 5e-062
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -2
Query: 956 INAPPEVFFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
I FF F SM KMG I V TGS G+IR+ CA +N
Sbjct: 283 IELQASTFFSDFGMSMEKMGRIGVLTGSAGQIRRRCAFIN 164
Score = 36.8 bits (74), Expect(4) = 5e-062
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / -2
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTI 820
G D DPSLD YAA L++KC+ + T +
Sbjct: 499 GKGDMDPSLDKYYAAHLKIKCQAGDNTTIV 410
>gb|CO365925.1|CO365925 RTK1_20_C04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_20_C04_A029 3', mRNA sequence
Length = 851
Score = 177 bits (381), Expect(3) = 1e-060
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / -2
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 703 GFYKQTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 524
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 523 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 344
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 343 GTVSKVDDA 317
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / +3
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 318 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 497
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 498 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 605
Score = 70.3 bits (147), Expect(3) = 1e-060
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2 / -2
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 331 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 152
Query: 731 GPD 739
PD
Sbjct: 151 KPD 143
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / +3
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 153 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 332
Score = 25.8 bits (50), Expect(3) = 1e-060
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2 / -2
Query: 731 GPDDADPSLDPLYAAKLRLKC 793
G DP++DP KL++ C
Sbjct: 160 GTGKPDPTMDPALVTKLKITC 98
>gb|CX650543.1|CX650543 COLD1_46_A01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_46_A01_A029 5', mRNA sequence
Length = 844
Score = 177 bits (381), Expect(3) = 1e-060
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / +1
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 175 GFYKQTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 354
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 355 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 534
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 535 GTVSKVDDA 561
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / -3
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 560 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 381
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 380 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 273
Score = 70.3 bits (147), Expect(3) = 1e-060
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2 / +1
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 547 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 726
Query: 731 GPD 739
PD
Sbjct: 727 KPD 735
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / -3
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 725 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 546
Score = 25.8 bits (50), Expect(3) = 1e-060
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2 / +1
Query: 731 GPDDADPSLDPLYAAKLRLKC 793
G DP++DP KL++ C
Sbjct: 718 GTGKPDPTMDPALVTKLKITC 780
>gb|DR167700.1|DR167700 RTPHOS1_20_B06.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_20_B06_A029 5', mRNA sequence
Length = 819
Score = 177 bits (381), Expect(3) = 1e-060
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / +2
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 116 GFYKQTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 295
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 296 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 475
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 476 GTVSKVDDA 502
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / -1
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 501 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 322
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 321 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 214
Score = 70.3 bits (147), Expect(3) = 1e-060
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2 / +2
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 488 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 667
Query: 731 GPD 739
PD
Sbjct: 668 KPD 676
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 666 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 487
Score = 25.8 bits (50), Expect(3) = 1e-060
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2 / +2
Query: 731 GPDDADPSLDPLYAAKLRLKC 793
G DP++DP KL++ C
Sbjct: 659 GTGKPDPTMDPALVTKLKITC 721
>gb|CF388215.1|CF388215 RTDR2_1_A12.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_A12_A021 5', mRNA
sequence
Length = 679
Score = 177 bits (381), Expect(3) = 1e-060
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / +3
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 39 GFYKQTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 218
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 219 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 398
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 399 GTVSKVDDA 425
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / -1
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 424 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 245
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 244 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 137
Score = 70.3 bits (147), Expect(3) = 1e-060
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2 / +3
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 411 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 590
Query: 731 GPD 739
PD
Sbjct: 591 KPD 599
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 589 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 410
Score = 25.8 bits (50), Expect(3) = 1e-060
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2 / +3
Query: 731 GPDDADPSLDPLYAAKLRLKC 793
G DP++DP KL++ C
Sbjct: 582 GTGKPDPTMDPALVTKLKITC 644
>gb|CF388014.1|CF388014 RTDR1_17_B01.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_17_B01_A015 5', mRNA
sequence
Length = 763
Score = 104 bits (221), Expect(5) = 2e-060
Identities = 41/71 (57%), Positives = 50/71 (70%)
Frame = +2 / +2
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E IPAPT N +QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 350 WDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVSHC 529
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 530 TSFVTRLYNFS 562
Score = 84.9 bits (179), Expect(5) = 2e-060
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +2 / +2
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFYD+SCP AE V + V+ + +VA L+R HFHDCFVRGCD SVL+++ + AE
Sbjct: 2 GFYDHSCP*AESTVFEVVRDAFLKSREVAPGLIRMHFHDCFVRGCDGSVLIDSIANNTAE 181
Query: 356 KDAAPN 373
KD+ N
Sbjct: 182 KDSPVN 199
Score = 51.9 bits (107), Expect(5) = 2e-060
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2 / +2
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L G+ ID K+ LE CP VSCADI+A AARDS
Sbjct: 200 NPSLHGYDVIDTAKSRLEAICPNTVSCADILAFAARDS 313
Score = 41.4 bits (84), Expect(5) = 2e-060
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2 / +2
Query: 803 TDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
++N T V MD + T D YY G+L++ GLF S L+TD
Sbjct: 641 SNNITTVFMDTYTPETIDNLYYNGLLEKHGLFTSRCTLLTD 763
Score = 26.7 bits (52), Expect(5) = 2e-060
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP+ A L+ KC
Sbjct: 578 DPSLDPMLADILKKKC 625
>gb|CO161877.1|CO161877 FLD1_31_F05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_F05_A029 5', mRNA sequence
Length = 868
Score = 136 bits (292), Expect(3) = 2e-060
Identities = 57/123 (46%), Positives = 78/123 (63%)
Frame = +2 / +1
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSI 550
N ++RG ID KA LE +C VSCADI+A+AAR SV + GGPFW V GRRD T +
Sbjct: 163 NNSIRGLDVIDAAKAALENQCNQTVSCADILAIAARTSVFLSGGPFWQVLLGRRDSTTAN 342
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
+ A + +P PT +++ F+ LN D+V LSG HTIG ++C +F+ RL++F G
Sbjct: 343 QSAANEHLPFPTDTLDKIISKFEAVGLNTTDVVALSGGHTIGRARCVTFNNRLFDFNSTG 522
Query: 731 GPD 739
PD
Sbjct: 523 SPD 531
Score = 82.2 bits (173), Expect(3) = 2e-060
Identities = 37/110 (33%), Positives = 56/110 (50%)
Frame = +2 / +1
Query: 746 DPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
D ++ P + L+ C DN T+ +D S FD +Y++ + GL QSD L
Sbjct: 529 DSTISPTFLTDLQTLCPVSGDNNTLAPLDHTSKDWFDNNYFKDLQNNTGLLQSDQELYAT 708
Query: 926 AASKADILSVINAPPEVFFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
AS ++ + P F F SM+KMG I TG+ G+IRK+C +V+
Sbjct: 709 DASTRSLVDTYSNNPITFSHDFVASMIKMGNISPLTGTNGQIRKNCRVVD 858
Score = 54.2 bits (112), Expect(3) = 2e-060
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 257 VASTLLRTHFHDCFVRGCDASVLLNATGGSEAEKDAAPN 373
+A++LLR HFHDCFV GCD SV+L+ E A PN
Sbjct: 46 MAASLLRLHFHDCFVNGCDGSVMLDDNATFTGEHMALPN 162
>gb|CO367149.1|CO367149 RTK1_32_B07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_B07_A029 5', mRNA sequence
Length = 844
Score = 155 bits (332), Expect(3) = 2e-060
Identities = 66/121 (54%), Positives = 83/121 (68%)
Frame = +2 / +3
Query: 377 TLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSIKQ 556
++RGFG +D+IK++LEK+CPGVVSCAD++A+AARDSV + GGP W GRRD + K
Sbjct: 324 SVRGFGVVDKIKSVLEKKCPGVVSCADLLAVAARDSVVISGGPTWEALLGRRDSRSASKS 503
Query: 557 EALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGP 736
A IPAPT L F+ K L+ DLV LSG HTIG+S+C SF RLYN +G P
Sbjct: 504 GANYNIPAPTSTHQTLETKFKLKGLHSLDLVVLSGGHTIGLSRCTSFKARLYNNSGTAKP 683
Query: 737 D 739
D
Sbjct: 684 D 686
Score = 86.8 bits (183), Expect(3) = 2e-060
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2 / +3
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L +YD SCP+A I+K V+ + A++LLR HFHDCFV+GCDAS+LL+ T
Sbjct: 111 LTPNYYDKSCPEALSIIKSGVEDAVKQEARFAASLLRLHFHDCFVKGCDASILLDDTANF 290
Query: 347 EAEKDAAPNL 376
EK A PNL
Sbjct: 291 TGEKTAKPNL 320
Score = 72.5 bits (152), Expect(3) = 7e-024
Identities = 35/67 (52%), Positives = 42/67 (62%)
Frame = -3 / -1
Query: 585 VGAGIWSSASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALM 406
VGAG+ A L+ + S LP Q GPP+ TESRAA+A SA DTTPGH FSS+ L+
Sbjct: 532 VGAGML*FAPLLLALLESLLPNRASQVGPPLITTESRAATARRSAHDTTPGHFFSSTLLI 353
Query: 405 RSMKPKP 385
S P P
Sbjct: 352 LSTTPNP 332
Score = 43.2 bits (88), Expect(3) = 7e-024
Identities = 29/65 (44%), Positives = 35/65 (53%)
Frame = -3 / -1
Query: 375 RLGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACG 196
RLG A FS V+ S +ASQPLTKQS K RS+ A + + T L I A G
Sbjct: 319 RLGFAVFSPVKLAVSSSRIEASQPLTKQS*KCRRSKEAANLASCFTASSTPDLMIDKASG 140
Query: 195 QE*S* 181
Q+ S*
Sbjct: 139 QDLS* 125
Score = 33.6 bits (67), Expect(3) = 7e-024
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -3 / -1
Query: 723 PVKLYRRSLKELHWEMPIV*APESQTRSARLRLL 622
P+ LY +LK +H + PIV PE TRS+ R L
Sbjct: 670 PLLLYSLALKLVHRDKPIVCPPERTTRSSEWRPL 569
Score = 31.3 bits (62), Expect(3) = 2e-060
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2 / +3
Query: 803 TDNTTIVEMDPGSFRTFDLSYYRGVLKRRGL 895
TD+ V +DP + FD++YY+ ++ +GL
Sbjct: 744 TDDNQTVPLDPVTPFKFDVNYYKNIVASKGL 836
>gb|DR090334.1|DR090334 RTAL1_14_H01.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_14_H01_A029 3', mRNA sequence
Length = 816
Score = 177 bits (381), Expect(3) = 3e-060
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / -3
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 610 GFYKQTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 431
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 430 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 251
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 250 GTVSKVDDA 224
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / +3
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 225 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 404
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 405 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 512
Score = 70.3 bits (147), Expect(3) = 3e-060
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2 / -3
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 238 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 59
Query: 731 GPD 739
PD
Sbjct: 58 KPD 50
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / +3
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 60 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 239
Score = 24.4 bits (47), Expect(3) = 3e-060
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2 / -3
Query: 731 GPDDADPSLDPLYAAKLRLKC 793
G DP++DP KL+ C
Sbjct: 67 GTGKPDPTMDPALVTKLKTTC 5
>gb|CO165979.1|CO165979 FLD1_58_B01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_58_B01_A029 5', mRNA sequence
Length = 807
Score = 176 bits (378), Expect(3) = 9e-060
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / +2
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 101 GFY*QTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 280
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 281 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 460
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 461 GTVSKVDDA 487
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / -1
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 486 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 307
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 306 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 199
Score = 70.3 bits (147), Expect(3) = 9e-060
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2 / +2
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 473 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 652
Query: 731 GPD 739
PD
Sbjct: 653 KPD 661
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 651 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 472
Score = 24.4 bits (47), Expect(3) = 9e-060
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2 / +2
Query: 731 GPDDADPSLDPLYAAKLRLKC 793
G DP++DP KL+ C
Sbjct: 644 GTGKPDPTMDPALVTKLKTTC 706
>gb|DR682787.1|DR682787 EST1072862 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC22, mRNA sequence
Length = 857
Score = 131 bits (281), Expect(3) = 2e-059
Identities = 55/89 (61%), Positives = 64/89 (71%)
Frame = +2 / -3
Query: 473 ARDSVGVIGGPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVW 652
ARD+ GGPFW V TGRRDG +S++ EAL IPAPT NF QL SF +K LN+ DLV
Sbjct: 855 ARDAGFARGGPFWQVKTGRRDGRISVESEALSNIPAPTFNFQQLKDSFASKGLNVQDLVV 676
Query: 653 LSGAHTIGISQCNSFSERLYNFTGHGGPD 739
LSGAHTIG+S C+ FS RLY+F GG D
Sbjct: 675 LSGAHTIGMSHCSFFSNRLYSFGRSGGMD 589
Score = 88.6 bits (187), Expect(3) = 2e-059
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = +2 / -3
Query: 746 DPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
DP+L+ LYA L+++CK LTDN + VEMDPGS FD Y+ + RGLFQSDAAL+T+
Sbjct: 591 DPTLENLYAQLLKMQCKNLTDNISKVEMDPGSSLAFDSHYFGNLELNRGLFQSDAALLTN 412
Query: 926 AASKADILSVIN 961
+KA+I ++ N
Sbjct: 411 FVAKANIDNLRN 376
Score = 49.2 bits (101), Expect(3) = 2e-059
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / -3
Query: 977 FFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVNKH 1081
FF+ F SM +MG IE+ TGS GEIR+ CA VN H
Sbjct: 366 FFENFKLSMQRMGEIEMLTGSAGEIRRKCAFVN*H 262
>gb|DT631437.1|DT631437 EST1146368 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF876 3' end, mRNA sequence
Length = 933
Score = 106 bits (226), Expect(4) = 3e-059
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +2 / +3
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E L IPAPT N +QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 540 WDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVSHC 719
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 720 TSFVTRLYNFS 752
Score = 94.5 bits (200), Expect(4) = 3e-059
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2 / +3
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L+ GFYDYSCP+AE V + V+ ++ +VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 183 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 362
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 363 TAEKDSIVN 389
Score = 54.7 bits (113), Expect(4) = 3e-059
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +2 / +3
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF ID K+ LE CP VSCADIVA AARDS
Sbjct: 390 NPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDS 503
Score = 31.3 bits (62), Expect(4) = 3e-059
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YAA L+ KC
Sbjct: 768 DPSLDPKYAALLKEKC 815
>gb|DR079785.1|DR079785 RTFEPL1_17_D11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_17_D11_A029 5', mRNA sequence
Length = 783
Score = 105 bits (224), Expect(4) = 2e-058
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = +2 / +1
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E L IPAPT N QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 376 WDVPAGRRDGIISLASEVLTNIPAPTFNVNQLTQSFASKGLSQNDMVILSGAHSIGVSHC 555
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 556 TSFVTRLYNFS 588
Score = 94.5 bits (200), Expect(4) = 2e-058
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2 / +1
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L+ GFYDYSCP+AE V + V+ ++ +VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 19 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 198
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 199 TAEKDSIVN 225
Score = 53.3 bits (110), Expect(4) = 2e-058
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +2 / +1
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF ID K+ LE CP VSCADI+A AARDS
Sbjct: 226 NPSLHGFDVIDTAKSRLETICPNTVSCADILAFAARDS 339
Score = 31.3 bits (62), Expect(4) = 2e-058
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / +1
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YAA L+ KC
Sbjct: 604 DPSLDPKYAALLKEKC 651
>gb|CV034435.1|CV034435 RTNACL1_40_H06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_H06_A029 5', mRNA sequence
Length = 759
Score = 177 bits (381), Expect(2) = 2e-058
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / +1
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 184 GFYKQTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 363
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 364 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 543
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 544 GTVSKVDDA 570
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / -2
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 569 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 390
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 389 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 282
Score = 70.3 bits (147), Expect(2) = 2e-058
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2 / +1
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 556 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 735
Query: 731 GPD 739
PD
Sbjct: 736 KPD 744
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / -2
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 734 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 555
>gb|CX652846.1|CX652846 COLD1_61_G11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_61_G11_A029 5', mRNA sequence
Length = 909
Score = 98.7 bits (209), Expect(5) = 5e-058
Identities = 39/78 (50%), Positives = 48/78 (61%)
Frame = +2 / +2
Query: 506 FWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQ 685
+W VP GR+DG +S+ +P PT N TQL Q F K L+ ++V LSGAHTIG+S
Sbjct: 515 WWDVPAGRKDGNISLASNIPGNLPPPTFNVTQLTQIFATKGLSQDEMVTLSGAHTIGVSH 694
Query: 686 CNSFSERLYNFTGHGGPD 739
C SF RLYNF G D
Sbjct: 695 CTSFVSRLYNFNGTNTTD 748
Score = 79.4 bits (167), Expect(5) = 5e-058
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +2 / +2
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L G+Y CP AE IV VK+ +P++A+ L+R HFHDCFVRGCD SVL+++ G
Sbjct: 158 LAVGYYKNICPAAEPIVLGVVKSAFHSSPEIAAKLIRLHFHDCFVRGCDGSVLIDSISGQ 337
Query: 347 EAEKDAAP 370
+ +P
Sbjct: 338 FVAEKDSP 361
Score = 58.8 bits (122), Expect(5) = 5e-058
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +2 / +2
Query: 365 APNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
A N +L GF ID K LLEK CP VSCADIVA AARDS
Sbjct: 362 ANNPSLGGFNVIDNAKTLLEKICPKKVSCADIVAFAARDS 481
Score = 35.0 bits (70), Expect(5) = 5e-058
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 731 GPDDADPSLDPLYAAKLRLKC 793
G + DPSLDP YA KL+ KC
Sbjct: 731 GTNTTDPSLDPSYAQKLKQKC 793
Score = 29.0 bits (57), Expect(5) = 5e-058
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2 / +2
Query: 815 TIVEMDPGSFRTFDLSYYRGVLKRRGLF 898
T V MDP + D YY V+ +RGLF
Sbjct: 821 TTVVMDPETPFILDNLYYNDVIAKRGLF 904
>dbj|BD224556.1| Materials and methods for the modification of plant lignin content
Length = 1224
Score = 131 bits (281), Expect(4) = 5e-058
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = +2 / +2
Query: 383 RGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSIKQEA 562
RGF ID IK +E C GVVSCADI+ +AARDS+ + GP W+V GRRD T + A
Sbjct: 353 RGFEVIDSIKTQVEAACSGVVSCADILTIAARDSIVELQGPTWTVMLGRRDSTTASLSAA 532
Query: 563 LDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFT 721
+ IP+P + + L+ SFQ L+ DLV LSGAHTIG S+C F R+YN T
Sbjct: 533 NNNIPSPASSLSTLISSFQAHGLSTKDLVALSGAHTIGQSRCAFFRTRIYNET 691
Score = 76.2 bits (160), Expect(4) = 5e-058
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = +2 / +2
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L FY SCP+ IVK VK + + ++L+R HFHDCFV GCD S+LL+
Sbjct: 134 LSSTFYAKSCPRLPSIVKSVVKQAVAKEKRMGASLVRLHFHDCFVNGCDGSILLDDNATF 313
Query: 347 EAEKDAAPN 373
EK A PN
Sbjct: 314 TGEKTAGPN 340
Score = 40.0 bits (81), Expect(4) = 5e-058
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2 / +2
Query: 977 FFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
FF F +MVKMG I TG+ G+IRK+C N
Sbjct: 914 FFIDFTAAMVKMGNISPLTGTNGQIRKNCRKSN 1012
Score = 35.0 bits (70), Expect(4) = 5e-058
Identities = 13/67 (19%), Positives = 33/67 (49%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
+ +++ +A ++ C + ++ + +D + TFD YY + ++GL SD L
Sbjct: 686 ETNINAAFATSVKANCPSAGGDSNLSPLDAVTSITFDNKYYSNLKIQKGLLHSDQQLFNG 865
Query: 926 AASKADI 946
++ + +
Sbjct: 866 GSTDSQV 886
>gb|DR178242.1|DR178242 RTMNUT1_10_G05.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_10_G05_A029 3', mRNA sequence
Length = 716
Score = 181 bits (390), Expect(2) = 7e-058
Identities = 74/127 (58%), Positives = 94/127 (74%)
Frame = +2 / -2
Query: 179 FYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAEK 358
FY +CPQAE +V+ V+ + + LLR HFHDCF+RGC+ASVL+++T G+ AEK
Sbjct: 691 FYRETCPQAEVLVRSIVQKWFLKDKSIPAGLLRLHFHDCFIRGCEASVLIDSTEGNIAEK 512
Query: 359 DAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDG 538
DA PNLTLRGF ID IKALLE +C G+VSCADI+ LA RD++ + GGP + VPTGRRDG
Sbjct: 511 DAIPNLTLRGFELIDEIKALLENKCKGIVSCADILTLATRDAISLSGGPAYPVPTGRRDG 332
Query: 539 TVSIKQE 559
VS +E
Sbjct: 331 LVSKIEE 311
Score = 64.3 bits (134), Expect(2) = 7e-058
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +2 / -2
Query: 572 IPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
IP PT L +FQ+ LNL DL L GAHTIG + C F++R+Y+F G D
Sbjct: 304 IPGPTFTIDAALSAFQSVGLNLTDLATLLGAHTIGFAHCGFFNDRMYDFDDTGMAD 137
>gb|BX680067.1|BX680067 BX680067 RS Pinus pinaster cDNA clone RS38G03, mRNA sequence
Length = 648
Score = 111 bits (237), Expect(4) = 1e-057
Identities = 46/80 (57%), Positives = 53/80 (66%)
Frame = +2 / +3
Query: 500 GPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGI 679
GPFW TGRRDG +S E L +P+P NF+QL SF +K L++ DLV LSG HTIGI
Sbjct: 63 GPFWREKTGRRDGRISNASEVLINVPSPFFNFSQLKTSFASKGLSVKDLVVLSGGHTIGI 242
Query: 680 SQCNSFSERLYNFTGHGGPD 739
CN S RLYNFTG G D
Sbjct: 243 GHCNLVSRRLYNFTGKGDMD 302
Score = 90.9 bits (192), Expect(4) = 1e-057
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = +2 / +3
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDA 910
G D DPSLD YA +L+ KC +L D TT + MDPGS TFD Y+ + RGLFQSDA
Sbjct: 285 GKGDMDPSLDKSYAEQLKTKCTSLADTTTPLPMDPGSPLTFDSDYFSNLKSHRGLFQSDA 464
Query: 911 ALITDAASK 937
AL+TD+ S+
Sbjct: 465 ALLTDSTSE 491
Score = 50.1 bits (103), Expect(4) = 1e-057
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 971 EVFFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
E FF F S+ +MG I + TGS GEIRKHCA VN
Sbjct: 519 ESFFDNFKNSIQRMGEIGLLTGSAGEIRKHCAFVN 623
Score = 29.0 bits (57), Expect(4) = 1e-057
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 443 VSCADIVALAARDSV 487
VSCADI++L ARD+V
Sbjct: 3 VSCADILSLVARDAV 47
>gb|CO201890.1|CO201890 RTCNT2_8_F12.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_F12_A029 5', mRNA sequence
Length = 766
Score = 103 bits (220), Expect(4) = 2e-057
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = +2 / +3
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E IPAPT N QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 480 WDVPAGRRDGIISLASEVATNIPAPTFNVNQLTQSFASKGLSQKDMVILSGAHSIGVSHC 659
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 660 TSFVTRLYNFS 692
Score = 93.2 bits (197), Expect(4) = 2e-057
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +2 / +3
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L+ GFYDYSCP+AE V + V+ + +VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 123 LEVGFYDYSCPKAESTVFEVVRDAFLNNREVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 302
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 303 TAEKDSIVN 329
Score = 52.8 bits (109), Expect(4) = 2e-057
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2 / +3
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF ID K+ LE CP +SCADI+A AARDS
Sbjct: 330 NPSLHGFDVIDTAKSRLETICPNTISCADILAFAARDS 443
Score = 31.3 bits (62), Expect(4) = 2e-057
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YAA L+ KC
Sbjct: 708 DPSLDPKYAALLKEKC 755
>gb|DR683701.1|DR683701 EST1073777 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAK31 3' end, mRNA sequence
Length = 811
Score = 145 bits (311), Expect(3) = 3e-057
Identities = 62/123 (50%), Positives = 79/123 (64%)
Frame = +2 / +1
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSI 550
N +LRGF +D IK+ +E C VSCADI+A+AA SV + GGP W++ GRRD T +
Sbjct: 304 NNSLRGFDVVDNIKSAVESACNATVSCADILAIAAEQSVVLSGGPSWTIQLGRRDSTTAN 483
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
IPAPT N + + FQN L+L D+V LSGAHTIG ++C F RLYNF+G G
Sbjct: 484 ATLPNTAIPAPTDNLSVITTEFQNVGLSLTDVVALSGAHTIGRARCTVFISRLYNFSGTG 663
Query: 731 GPD 739
PD
Sbjct: 664 NPD 672
Score = 77.6 bits (163), Expect(3) = 3e-057
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = +2 / +1
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L FY +CP IV ++ + + +A++LLR HFHDCFV GCD SVLL+ T
Sbjct: 97 LSPTFYQSTCPNVTNIVGQVIQQALQNDSRIAASLLRLHFHDCFVNGCDGSVLLDDTANF 276
Query: 347 EAEKDAAPN 373
EK A PN
Sbjct: 277 TGEKTAGPN 303
Score = 39.1 bits (79), Expect(3) = 3e-057
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2 / +1
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYY 868
G + DP+L+ Y + L+ C + + + +DPG+ TFD +YY
Sbjct: 655 GTGNPDPTLNSSYLSTLQSTCPLNGNGSILTPLDPGTPNTFDNNYY 792
>gb|CF671964.1|CF671964 RTCNT1_60_A05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_A05_A029 5', mRNA sequence
Length = 756
Score = 106 bits (226), Expect(4) = 3e-057
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +2 / +2
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E L IPAPT N +QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 494 WDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVSHC 673
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 674 TSFVTRLYNFS 706
Score = 94.5 bits (200), Expect(4) = 3e-057
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2 / +2
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L+ GFYDYSCP+AE V + V+ ++ +VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 137 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 316
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 317 TAEKDSIVN 343
Score = 54.7 bits (113), Expect(4) = 3e-057
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +2 / +2
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF ID K+ LE CP VSCADIVA AARDS
Sbjct: 344 NPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDS 457
Score = 24.4 bits (47), Expect(4) = 3e-057
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 746 DPSLDPLYAA 775
DPSLDP YAA
Sbjct: 722 DPSLDPKYAA 751
>gb|DR024613.1|DR024613 STRS1_66_E01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_E01_A034 3', mRNA sequence
Length = 847
Score = 93.2 bits (197), Expect(5) = 4e-057
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = +2 / -1
Query: 500 GPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGI 679
G W VP GRRDG +S + +P P +N TQL Q F K L+ ++V LSGAHTIG+
Sbjct: 454 GLSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGV 275
Query: 680 SQCNSFSERLYNF 718
S C+SF RLYNF
Sbjct: 274 SHCSSFVSRLYNF 236
Score = 86.8 bits (183), Expect(5) = 4e-057
Identities = 36/69 (52%), Positives = 45/69 (65%)
Frame = +2 / -1
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L GFY +SCP AE IV + V+ VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 802 LTVGFYRWSCPAAESIVFEAVRTAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 623
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 622 TAEKDSPAN 596
Score = 53.8 bits (111), Expect(5) = 4e-057
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +2 / -1
Query: 365 APNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
A N +L GF ID K+ LE CP VSCADI+A AARDS
Sbjct: 601 ANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDS 482
Score = 36.8 bits (74), Expect(5) = 4e-057
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2 / -1
Query: 815 TIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
T V M+ + T D YY + ++ GLF SDAAL+TD
Sbjct: 142 TTVPMEIVTPNTLDNVYYDELKRKHGLFTSDAALLTD 32
Score = 27.2 bits (53), Expect(5) = 4e-057
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YA L+ +C
Sbjct: 217 DPSLDPNYANILKARC 170
>gb|DR090425.1|DR090425 RTAL1_15_A06.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_15_A06_A029 3', mRNA sequence
Length = 766
Score = 105 bits (224), Expect(4) = 5e-057
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = +2 / -1
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E L IPAPT N QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 268 WDVPAGRRDGIISLASEVLTNIPAPTFNVNQLTQSFASKGLSQNDMVILSGAHSIGVSHC 89
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 88 TSFVTRLYNFS 56
Score = 94.5 bits (200), Expect(4) = 5e-057
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2 / -1
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L+ GFYDYSCP+AE V + V+ ++ +VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 625 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 446
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 445 TAEKDSIVN 419
Score = 53.3 bits (110), Expect(4) = 5e-057
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +2 / -1
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF ID K+ LE CP VSCADI+A AARDS
Sbjct: 418 NPSLHGFDVIDTAKSRLETICPNTVSCADILAFAARDS 305
Score = 26.3 bits (51), Expect(4) = 5e-057
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 746 DPSLDPLYAAKLR 784
DPSLDP YAA L+
Sbjct: 40 DPSLDPKYAALLK 2
>gb|CO370001.1|CO370001 RTK1_55_H10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_H10_A029 5', mRNA sequence
Length = 686
Score = 177 bits (381), Expect(2) = 6e-057
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2 / +1
Query: 176 GFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGSEAE 355
GFY +CP AE++V+ V+ + LLR HFHDCFVRGCDAS+L+++T ++AE
Sbjct: 130 GFYKQTCPNAERLVQLRVQKKFSTDKTIVPALLRMHFHDCFVRGCDASLLVDSTAANQAE 309
Query: 356 KDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRD 535
K+A PN T+RGF FID +K +LE C VSCADI+ALA RD+V + GGP + VPTGRRD
Sbjct: 310 KEAGPNQTVRGFEFIDEVKKVLEAVCANTVSCADIIALATRDAVALAGGPRYDVPTGRRD 489
Query: 536 GTVSIKQEA 562
GTVS +A
Sbjct: 490 GTVSKVDDA 516
Score = 104 bits (221), Expect(2) = 1e-026
Identities = 53/96 (55%), Positives = 59/96 (61%)
Frame = -3 / -1
Query: 561 ASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALMRSMKPKPR 382
AS +DTVPS LPVGT GPP T S ASA MSAQDT H+ S + L SM P
Sbjct: 515 ASSTLDTVPSLLPVGTSYRGPPARATASLVASAIMSAQDTVLAHTASRTFLTSSMNSNPL 336
Query: 381 SVRLGAASFSASLPPVALSSTDASQPLTKQSWKWVR 274
+V LG ASFSA V +S DAS PLTKQS K +R
Sbjct: 335 TV*LGPASFSA*FAAVESTSRDASHPLTKQS*KCIR 228
Score = 65.2 bits (136), Expect(2) = 6e-057
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +2 / +1
Query: 551 KQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHG 730
K + +++P P + Q +F +K L++ DLV L GAHT+GI+ C+ F++RLYNF G G
Sbjct: 502 KVDDANKLPDPNDSAIQSSSAFASKGLSVLDLVTLLGAHTVGITHCSFFNDRLYNFLGTG 681
Score = 37.3 bits (75), Expect(2) = 1e-026
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3 / -1
Query: 729 PCPVKLYRRSLKELHWEMPIV*APESQTRSARLRLLFWKDWRSWVKFMVGAGIWSSASCL 550
P P KLY SLK+L MP V AP TRS R L + +G+G ++S L
Sbjct: 680 PVPKKLYSLSLKKLQCVMPTVCAPNRVTRSRTERPLEANAEEDCMALSLGSGSLFASSTL 501
>gb|CX652982.1|CX652982 COLD1_62_E03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_E03_A029 5', mRNA sequence
Length = 796
Score = 104 bits (222), Expect(4) = 6e-057
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +2 / +2
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E L IPAPT N +QL QSF K L+ +++ LSGAH+IG+S C
Sbjct: 440 WDVPAGRRDGIISLASEVLTNIPAPTFNLSQLTQSFAAKGLSQEEMIILSGAHSIGVSHC 619
Query: 689 NSFSERLYNFT 721
+SF +RLYNF+
Sbjct: 620 SSFVKRLYNFS 652
Score = 89.5 bits (189), Expect(4) = 6e-057
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +2 / +2
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
LK GFY+ SCP+AE V + V+ + +VA L+R HFHDCFVRGCD S+L+++T S
Sbjct: 83 LKVGFYNCSCPEAESTVFEVVRDAFLDSREVAPGLIRMHFHDCFVRGCDGSILIDSTATS 262
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 263 TAEKDSPVN 289
Score = 56.5 bits (117), Expect(4) = 6e-057
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2 / +2
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF IDR K+ LE CP VSCADI+A AARDS
Sbjct: 290 NPSLHGFDVIDRAKSRLETMCPNTVSCADILAFAARDS 403
Score = 28.6 bits (56), Expect(4) = 6e-057
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKC 793
DPS+DP YA L+ KC
Sbjct: 668 DPSIDPQYAGLLKEKC 715
>gb|DR060871.1|DR060871 RTNIT1_30_C05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_C05_A029 5', mRNA sequence
Length = 777
Score = 93.2 bits (197), Expect(5) = 8e-057
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = +2 / +3
Query: 500 GPFWSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGI 679
G W VP GRRDG +S + +P P +N TQL Q F K L+ ++V LSGAHTIG+
Sbjct: 357 GLSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGV 536
Query: 680 SQCNSFSERLYNF 718
S C+SF RLYNF
Sbjct: 537 SHCSSFVSRLYNF 575
Score = 88.6 bits (187), Expect(5) = 8e-057
Identities = 37/69 (53%), Positives = 46/69 (66%)
Frame = +2 / +3
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L GFY +SCP AE IV + V+A VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 9 LTVGFYRWSCPAAESIVFEAVRAAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 188
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 189 TAEKDSPAN 215
Score = 53.8 bits (111), Expect(5) = 8e-057
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +2 / +3
Query: 365 APNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
A N +L GF ID K+ LE CP VSCADI+A AARDS
Sbjct: 210 ANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDS 329
Score = 34.1 bits (68), Expect(5) = 8e-057
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2 / +3
Query: 815 TIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALIT 922
T V M+ + T D YY + ++ GLF SDAAL+T
Sbjct: 669 TTVPMEIVTPNTLDNVYYDELKRKHGLFTSDAALLT 776
Score = 27.2 bits (53), Expect(5) = 8e-057
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YA L+ +C
Sbjct: 594 DPSLDPNYANILKARC 641
>gb|DR050769.1|DR050769 RTBOR1_25_C07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_C07_A029 5', mRNA sequence
Length = 836
Score = 102 bits (218), Expect(4) = 2e-056
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +2 / +2
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E IPAPT N +QL Q F +K L+ D+V LSGAH+IG+S C
Sbjct: 509 WDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQRFASKGLSQKDMVILSGAHSIGVSHC 688
Query: 689 NSFSERLYNFT 721
+SF RLYNF+
Sbjct: 689 SSFVSRLYNFS 721
Score = 90.9 bits (192), Expect(4) = 2e-056
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = +2 / +2
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L+ GFYD+SCP+AE V + V+ + +VA L+R HFHDCFVRGCD SVL+++T +
Sbjct: 152 LEVGFYDHSCPKAESTVFEVVRHAFLKSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANN 331
Query: 347 EAEKDAAPN 373
AEKD+ N
Sbjct: 332 TAEKDSPIN 358
Score = 52.8 bits (109), Expect(4) = 2e-056
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +2 / +2
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF I+ K+ LE CP VSCADIVA AARDS
Sbjct: 359 NPSLHGFDVIETAKSRLEAICPNTVSCADIVAFAARDS 472
Score = 31.3 bits (62), Expect(4) = 2e-056
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YAA L+ KC
Sbjct: 737 DPSLDPKYAALLKEKC 784
>gb|CF389670.1|CF389670 RTDR2_8_D11.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_D11_A021 5', mRNA
sequence
Length = 768
Score = 106 bits (226), Expect(5) = 2e-056
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +2 / +2
Query: 509 WSVPTGRRDGTVSIKQEALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQC 688
W VP GRRDG +S+ E L IPAPT N +QL QSF +K L+ D+V LSGAH+IG+S C
Sbjct: 251 WDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVSHC 430
Query: 689 NSFSERLYNFT 721
SF RLYNF+
Sbjct: 431 TSFVTRLYNFS 463
Score = 57.0 bits (118), Expect(5) = 2e-056
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 281 HFHDCFVRGCDASVLLNATGGSEAEKDAAPN 373
HFHDCFVRGCD SVL+++T + AEKD+ N
Sbjct: 8 HFHDCFVRGCDGSVLIDSTANNTAEKDSIVN 100
Score = 54.7 bits (113), Expect(5) = 2e-056
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +2 / +2
Query: 371 NLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDS 484
N +L GF ID K+ LE CP VSCADIVA AARDS
Sbjct: 101 NPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDS 214
Score = 46.0 bits (94), Expect(5) = 2e-056
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 803 TDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALITD 925
++N T V MD + T D YY G+L + GLF SDAAL+TD
Sbjct: 542 SNNITTVFMDIITPETLDNLYYDGLLNKHGLFTSDAALLTD 664
Score = 31.3 bits (62), Expect(5) = 2e-056
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 746 DPSLDPLYAAKLRLKC 793
DPSLDP YAA L+ KC
Sbjct: 479 DPSLDPKYAALLKEKC 526
>gb|CO163593.1|CO163593 FLD1_42_C09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_C09_A029 5', mRNA sequence
Length = 837
Score = 154 bits (330), Expect(2) = 2e-056
Identities = 66/121 (54%), Positives = 82/121 (67%)
Frame = +2 / +1
Query: 377 TLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVPTGRRDGTVSIKQ 556
++RGFG +D+IK+ LEK+CPGVVSCAD++A+AARDSV + GGP W GRRD + K
Sbjct: 376 SVRGFGVVDKIKSALEKKCPGVVSCADLLAVAARDSVVISGGPTWEALLGRRDSRSASKS 555
Query: 557 EALDQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGP 736
A IPAPT L F+ K L+ DLV LSG HTIG+S+C SF RLYN +G P
Sbjct: 556 GANYNIPAPTSTHQTLETKFKLKGLHSLDLVVLSGGHTIGLSRCTSFKARLYNNSGTAKP 735
Query: 737 D 739
D
Sbjct: 736 D 738
Score = 86.8 bits (183), Expect(2) = 2e-056
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2 / +1
Query: 167 LKEGFYDYSCPQAEKIVKDYVKAHIPHAPDVASTLLRTHFHDCFVRGCDASVLLNATGGS 346
L +YD SCP+A I+K V+ + A++LLR HFHDCFV+GCDAS+LL+ T
Sbjct: 163 LTPNYYDKSCPEALSIIKSGVEDAVKQEARFAASLLRLHFHDCFVKGCDASILLDDTANF 342
Query: 347 EAEKDAAPNL 376
EK A PNL
Sbjct: 343 TGEKTAKPNL 372
Score = 72.5 bits (152), Expect(3) = 7e-024
Identities = 35/67 (52%), Positives = 42/67 (62%)
Frame = -3 / -2
Query: 585 VGAGIWSSASCLMDTVPSRLPVGTLQNGPPMTPTESRAASATMSAQDTTPGHSFSSSALM 406
VGAG+ A L+ + S LP Q GPP+ TESRAA+A SA DTTPGH FSS+ L+
Sbjct: 584 VGAGML*FAPLLLALLESLLPNRASQVGPPLITTESRAATARRSAHDTTPGHFFSSALLI 405
Query: 405 RSMKPKP 385
S P P
Sbjct: 404 LSTTPNP 384
Score = 43.2 bits (88), Expect(3) = 7e-024
Identities = 29/65 (44%), Positives = 35/65 (53%)
Frame = -3 / -2
Query: 375 RLGAASFSASLPPVALSSTDASQPLTKQSWKWVRSRVEATSGAWGMCAFT*SLTIFSACG 196
RLG A FS V+ S +ASQPLTKQS K RS+ A + + T L I A G
Sbjct: 371 RLGFAVFSPVKLAVSSSRIEASQPLTKQS*KCRRSKEAANLASCFTASSTPDLMIDKASG 192
Query: 195 QE*S* 181
Q+ S*
Sbjct: 191 QDLS* 177
Score = 33.6 bits (67), Expect(3) = 7e-024
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -3 / -2
Query: 723 PVKLYRRSLKELHWEMPIV*APESQTRSARLRLL 622
P+ LY +LK +H + PIV PE TRS+ R L
Sbjct: 722 PLLLYSLALKLVHRDKPIVCPPERTTRSSEWRPL 621
>gb|DR387241.1|DR387241 RTHG1_20_A03.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_20_A03_A029 5', mRNA sequence
Length = 819
Score = 105 bits (224), Expect(5) = 4e-056
Identities = 44/74 (59%), Positives = 53/74 (71%)
Frame = +2 / +2
Query: 341 GSEAEKDAAPNLTLRGFGFIDRIKALLEKECPGVVSCADIVALAARDSVGVIGGPFWSVP 520
G AEK+A NL LRGF I+ +K +E CPGVVSCADI+AL+ RD+V + GP WSVP
Sbjct: 59 GPSAEKNALTNLGLRGFDVIEDVKTKVEAACPGVVSCADILALSVRDAVVLTNGPSWSVP 238
Query: 521 TGRRDGTVSIKQEA 562
TGRRDG VS +A
Sbjct: 239 TGRRDGLVSSSSDA 280
Score = 67.0 bits (140), Expect(5) = 4e-056
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = +2 / +2
Query: 572 IPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
+P P+ + T L Q F +K L DLV L+GAHTIG + C FS RLYNFT G D
Sbjct: 287 LPTPSDSVTVLKQKFADKGLTTEDLVILAGAHTIGKTDCQFFSYRLYNFTSTGDAD 454
Score = 50.6 bits (104), Expect(5) = 4e-056
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +2 / +2
Query: 740 DADPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDAALI 919
DADP+++ Y + L+ +C + D + V++D GS TFD +++ V + +SD L
Sbjct: 446 DADPTINTAYLSDLQTQCPSGGDGSKRVDLDKGSSTTFDATFFSNVREGNAALESDQRLW 625
Query: 920 TDAASK 937
D ++K
Sbjct: 626 GDNSTK 643
Score = 41.8 bits (85), Expect(5) = 4e-056
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +2 / +2
Query: 977 FFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
F F SMVKM I VKTG+ GEIRK C+ N
Sbjct: 689 FNLAFTTSMVKMSNIGVKTGTNGEIRKVCSAFN 787
Score = 29.5 bits (58), Expect(5) = 4e-056
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 290 DCFVRGCDASVLL 328
DCF+ GCD S+L+
Sbjct: 17 DCFINGCDGSILI 55
>gb|DR177200.1|DR177200 RTMNUT1_3_F08.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_F08_A029 5', mRNA sequence
Length = 760
Score = 92.7 bits (196), Expect(4) = 6e-056
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +2 / -1
Query: 731 GPDDADPSLDPLYAAKLRLKCKTLTDNTTIVEMDPGSFRTFDLSYYRGVLKRRGLFQSDA 910
G DPSLD YA +L+ KCK+L DNTTIV MDP S TFD Y+ + RGLFQSDA
Sbjct: 499 GKGGMDPSLDKSYAEELKGKCKSLADNTTIVPMDPASPLTFDSDYFSNLKSHRGLFQSDA 320
Query: 911 ALITDAASKADILSVIN 961
AL+T+ SK + +N
Sbjct: 319 ALLTNDVSKIIVEKELN 269
Score = 88.1 bits (186), Expect(4) = 6e-056
Identities = 36/58 (62%), Positives = 40/58 (68%)
Frame = +2 / -1
Query: 566 DQIPAPTMNFTQLLQSFQNKSLNLADLVWLSGAHTIGISQCNSFSERLYNFTGHGGPD 739
+ +P P +F L SF K LN+ DLV LSGAHTIGI CNSFS RLYNFTG GG D
Sbjct: 655 NNLPFPVFDFADLKASFARKGLNVKDLVVLSGAHTIGIGHCNSFSNRLYNFTGKGGMD 482
Score = 47.8 bits (98), Expect(4) = 6e-056
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +2 / -1
Query: 464 ALAARDSVGVIGGPFWSVPTGRRDGTVSIKQEALD 568
+LAARD+V GP+W+V TGRRDG +S E L+
Sbjct: 760 SLAARDAVVASKGPYWAVKTGRRDGRISKANEVLN 656
Score = 47.3 bits (97), Expect(4) = 6e-056
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = +2 / -1
Query: 977 FFQVFAGSMVKMGAIEVKTGSEGEIRKHCALVN 1075
FF F S+ KMG I V GS GEIRKHCA VN
Sbjct: 259 FFDNFKYSIQKMGEIGVLRGSAGEIRKHCAFVN 161
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 519,180,507
Number of Sequences: 355925
Number of extensions: 6903116
Number of successful extensions: 52453
Number of sequences better than 1.0e-020: 1029
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 23144520825
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)