TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440773.2.1
(1437 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR165496.1|DR165496 RTPHOS1_5_A09.g1_A029 Roots minus ph... 293 e-111
gb|DR690385.1|DR690385 EST1080471 Normalized pine embryo li... 287 e-109
gb|CO167405.1|CO167405 FLD1_68_F03.g1_A029 Root flooded Pin... 293 e-108
gb|CO361729.1|CO361729 NDL2_6_E02.g1_A029 Needles control 2... 281 e-107
gb|CO161310.1|CO161310 FLD1_28_B01.b1_A029 Root flooded Pin... 293 e-101
gb|DT636376.1|DT636376 EST1151307 Normalized pine embryo li... 287 5e-097
gb|DR181347.1|DR181347 RTMNUT1_38_G12.b2_A029 Roots minus m... 268 2e-090
gb|DR089158.1|DR089158 RTAL1_6_H06.g1_A029 Roots plus added... 275 4e-088
gb|DR118504.1|DR118504 RTMG1_17_A03.g1_A029 Roots minus mag... 293 2e-087
gb|DT636926.1|DT636926 EST1151857 Normalized pine embryo li... 272 3e-087
gb|CX649335.1|CX649335 COLD1_34_C03.g1_A029 Root cold Pinus... 275 4e-086
gb|CO166121.1|CO166121 FLD1_59_B03.g1_A029 Root flooded Pin... 267 3e-085
gb|DR165420.1|DR165420 RTPHOS1_5_A09.b1_A029 Roots minus ph... 266 2e-084
gb|DR024659.1|DR024659 STRS1_66_C04.g1_A034 Shoot tip pitch... 240 2e-077
gb|BE496399.1|BE496399 NXCI_017_D12_F NXCI (Nsf Xylem Compr... 253 2e-077
gb|CO164159.1|CO164159 FLD1_46_E06.b1_A029 Root flooded Pin... 272 5e-076
gb|CX649763.1|CX649763 COLD1_41_H01.b1_A029 Root cold Pinus... 234 1e-075
gb|CF664723.1|CF664723 RTCNT1_11_C09.g1_A029 Root control P... 272 2e-075
gb|CO164009.1|CO164009 FLD1_45_E07.b1_A029 Root flooded Pin... 272 3e-075
gb|DR050795.1|DR050795 RTBOR1_25_E10.g1_A029 Roots plus add... 232 9e-075
gb|CF390785.1|CF390785 RTDR2_17_H10.g1_A021 Loblolly pine r... 265 8e-074
gb|DR686844.1|DR686844 EST1076922 Normalized pine embryo li... 210 4e-073
gb|CO162341.1|CO162341 FLD1_34_E09.g1_A029 Root flooded Pin... 271 9e-072
gb|CO197932.1|CO197932 GEO1_10_D09.b1_A029 Root gravitropis... 219 6e-071
gb|CX648134.1|CX648134 COLD1_26_F04.g1_A029 Root cold Pinus... 264 1e-069
gb|DR089072.1|DR089072 RTAL1_6_H06.b1_A029 Roots plus added... 210 2e-068
gb|CO167325.1|CO167325 FLD1_68_F03.b1_A029 Root flooded Pin... 211 6e-068
gb|CO162943.1|CO162943 FLD1_38_A12.g1_A029 Root flooded Pin... 254 1e-066
gb|DR117514.1|DR117514 RTMG1_7_A07.g1_A029 Roots minus magn... 203 5e-066
gb|DN612750.1|DN612750 EST965800 Subtracted pine embryo lib... 192 5e-066
gb|DT628616.1|DT628616 EST1155186 Subtracted pine embryo li... 192 5e-066
gb|CX714248.1|CX714248 RTPQ1_19_F08.g1_A032 Roots treated w... 248 5e-065
gb|CO164083.1|CO164083 FLD1_45_E07.g1_A029 Root flooded Pin... 194 8e-064
gb|CO162866.1|CO162866 FLD1_38_A12.b1_A029 Root flooded Pin... 194 8e-064
gb|DR691682.1|DR691682 EST1081769 Normalized pine embryo li... 244 9e-064
gb|CF672296.1|CF672296 RTCNT1_62_D06.g1_A029 Root control P... 193 4e-063
gb|DN611005.1|DN611005 EST964055 Subtracted pine embryo lib... 216 3e-060
gb|CX652526.1|CX652526 COLD1_59_E01.g1_A029 Root cold Pinus... 182 6e-060
gb|DR745125.1|DR745125 RTCU1_27_E06.b1_A029 Roots plus adde... 182 6e-060
gb|DN612719.1|DN612719 EST965769 Subtracted pine embryo lib... 216 1e-059
gb|DT628106.1|DT628106 EST1156855 Subtracted pine embryo li... 216 1e-059
gb|CV032506.1|CV032506 RTNACL1_8_D03.g1_A029 Roots plus add... 223 3e-057
gb|DN612927.1|DN612927 EST965977 Subtracted pine embryo lib... 210 3e-057
gb|CO362646.1|CO362646 RTK1_5_A12.b1_A029 Roots minus potas... 222 5e-057
gb|DR117521.1|DR117521 RTMG1_7_B02.g1_A029 Roots minus magn... 222 5e-057
gb|DN614765.1|DN614765 EST967815 Subtracted pine embryo lib... 206 8e-057
gb|CF390389.1|CF390389 RTDR2_19_E10.b1_A021 Loblolly pine r... 220 2e-056
gb|DN612064.1|DN612064 EST965114 Subtracted pine embryo lib... 207 2e-056
gb|DN611996.1|DN611996 EST965046 Subtracted pine embryo lib... 207 5e-056
gb|BX251301.1|BX251301 BX251301 Pinus pinaster differenciat... 217 1e-055
gb|CO164233.1|CO164233 FLD1_46_E06.g1_A029 Root flooded Pin... 166 2e-055
gb|CO197792.1|CO197792 GEO1_9_D08.b1_A029 Root gravitropism... 167 2e-055
gb|DR388029.1|DR388029 RTHG1_25_F01.g1_A029 Roots plus adde... 141 1e-054
gb|CF671877.1|CF671877 RTCNT1_59_H03.g1_A029 Root control P... 160 4e-053
gb|DR052202.1|DR052202 RTCA1_3_C04.b1_A029 Roots minus calc... 153 3e-052
gb|BX679459.1|BX679459 BX679459 RS Pinus pinaster cDNA clon... 111 3e-052
gb|AW290281.1|AW290281 NXNV017E04F Nsf Xylem Normal wood Ve... 138 2e-051
gb|CD026916.1|CD026916 NXNV017E04 Nsf Xylem Normal wood Ver... 138 2e-051
gb|DR118429.1|DR118429 RTMG1_17_A03.b1_A029 Roots minus mag... 155 5e-051
gb|CO365335.1|CO365335 RTK1_25_C04.b1_A029 Roots minus pota... 197 2e-049
gb|AW437867.1|AW437867 ST73C09 Pine TriplEx shoot tip libra... 196 4e-049
gb|AW056617.1|AW056617 ST53F10 Pine TriplEx shoot tip libra... 194 1e-048
gb|DR092029.1|DR092029 RTAL1_25_E06.g1_A029 Roots plus adde... 194 1e-048
gb|BX678563.1|BX678563 BX678563 RS Pinus pinaster cDNA clon... 100 2e-047
gb|DR024599.1|DR024599 STRS1_66_C04.b1_A034 Shoot tip pitch... 134 5e-046
gb|BM492781.1|BM492781 NXRV_030_H12_F NXRV (Nsf Xylem Root ... 119 1e-045
gb|CO366452.1|CO366452 RTK1_28_A03.b1_A029 Roots minus pota... 130 2e-044
gb|BX251040.1|BX251040 BX251040 Pinus pinaster differenciat... 59 4e-044
gb|BX682737.1|BX682737 BX682737 Pinus pinaster differenciat... 129 4e-044
gb|DR049627.1|DR049627 RTBOR1_18_A12.b1_A029 Roots plus add... 128 7e-043
gb|CO170800.1|CO170800 NDL1_17_B03.b1_A029 Needles control ... 124 1e-042
gb|BQ702215.1|BQ702215 NXSI_126_C02_F NXSI (Nsf Xylem Side ... 171 8e-042
gb|DT631002.1|DT631002 EST1145933 Normalized pine embryo li... 163 1e-041
gb|BG317734.1|BG317734 NXPV_005_A11_F NXPV (Nsf Xylem Plani... 104 3e-041
gb|DT634224.1|DT634224 EST1149155 Normalized pine embryo li... 59 3e-040
gb|CO166717.1|CO166717 FLD1_64_B05.b1_A029 Root flooded Pin... 115 7e-040
gb|CF397782.1|CF397782 RTDS3_1_G02.g1_A022 Drought-stressed... 115 7e-040
gb|CO158997.1|CO158997 FLD1_10_D08.g1_A029 Root flooded Pin... 98 2e-034
gb|BF778482.1|BF778482 NXSI_085_C06_F NXSI (Nsf Xylem Side ... 84 2e-034
gb|DR687315.1|DR687315 EST1077397 Normalized pine embryo li... 57 3e-033
gb|DR091970.1|DR091970 RTAL1_25_E06.b1_A029 Roots plus adde... 93 4e-033
gb|DN614701.1|DN614701 EST967751 Subtracted pine embryo lib... 142 5e-033
gb|DR072816.1|DR072816 RTDK1_28_F08.g1_A029 Roots, dark Pin... 141 1e-032
gb|CX649258.1|CX649258 COLD1_34_C03.b1_A029 Root cold Pinus... 88 5e-032
gb|DR166446.1|DR166446 RTPHOS1_12_B09.b2_A029 Roots minus p... 85 3e-030
gb|CX715121.1|CX715121 RTPQ1_31_B11.g1_A032 Roots treated w... 133 3e-030
gb|AW065152.1|AW065152 ST40C10 Pine TriplEx shoot tip libra... 123 4e-030
gb|DR090921.1|DR090921 RTAL1_18_F03.b1_A029 Roots plus adde... 79 5e-029
gb|DR117607.1|DR117607 RTMG1_8_A08.b1_A029 Roots minus magn... 78 2e-028
gb|DR742254.1|DR742254 RTCU1_2_G05.g1_A029 Roots plus added... 78 2e-028
gb|CF672967.1|CF672967 RTCNT1_75_D10.b1_A029 Root control P... 78 2e-028
gb|DR167996.1|DR167996 RTPHOS1_22_B11.g1_A029 Roots minus p... 78 2e-028
gb|CF665812.1|CF665812 RTCNT1_18_D09.g1_A029 Root control P... 75 3e-028
gb|CF665835.1|CF665835 RTCNT1_18_G11.g1_A029 Root control P... 60 6e-027
gb|BF778569.1|BF778569 NXSI_088_C01_F NXSI (Nsf Xylem Side ... 91 3e-025
gb|CO166055.1|CO166055 FLD1_59_B03.b1_A029 Root flooded Pin... 70 7e-024
gb|DR102200.1|DR102200 STRR1_79_G05.b1_A033 Stem Response R... 68 2e-022
gb|BE049757.1|BE049757 NXNV_143_F04_F Nsf Xylem Normal wood... 70 2e-022
gb|DR102278.1|DR102278 STRR1_79_G05.g1_A033 Stem Response R... 86 4e-022
gb|BF778688.1|BF778688 NXSI_090_G06_F NXSI (Nsf Xylem Side ... 91 1e-021
gb|CF393874.1|CF393874 RTDS2_1_F10.g1_A021 Drought-stressed... 70 5e-021
>gb|DR165496.1|DR165496 RTPHOS1_5_A09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_5_A09_A029 5', mRNA sequence
Length = 830
Score = 293 bits (634), Expect(3) = e-111
Identities = 106/172 (61%), Positives = 129/172 (75%)
Frame = +2 / +1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+C LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 220 RHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 399
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 400 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 579
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMH C EM H++Y+CP+CSK+ D++ WE LDQEI AT MP Y+ K+
Sbjct: 580 TMHGECLTEMKEHSQYSCPMCSKSVCDMSIIWEQLDQEIAATPMPYDYQNKM 735
Score = 179 bits (386), Expect = 3e-044
Identities = 86/147 (58%), Positives = 95/147 (64%)
Frame = -1 / -1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C+ IS KH CIV PQ RT + ES R
Sbjct: 713 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECSFISVKHSPCIV*PQRRTDIAFKESKR 534
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS
Sbjct: 533 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSS 354
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFV 328
NLH+ QKYSPILTPQ TC T C V
Sbjct: 353 KNLHVEQKYSPILTPQFSQTCLTFCSV 273
Score = 115 bits (245), Expect = 1e-024
Identities = 65/175 (37%), Positives = 95/175 (54%)
Frame = -3 / -3
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+L+ I RH +LLI FP I A+WT + + HF T VHC++T QN
Sbjct: 735 HLILIVIRHRCCCNLLI*LFPDYGHITD*LGAHWT*ILRVLFHFC*TFPVHCMTTTQNRY 556
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L* +K IL T+W ++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L
Sbjct: 555 CL*RIKKILKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMIL 376
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPISG 266
III + A T++L H ++T + +L L TE N FN ++ M G
Sbjct: 375 LL*DIIIKELAR*TEILPHFNTTVFTNLLDILLSVTERTNNPFNFVSWELMAQQG 211
Score = 85.8 bits (181), Expect(3) = e-111
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+DR + G M HGC HYRRRC+I APCCN+++ CRHCHNEA
Sbjct: 73 LDRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEA 192
Score = 62.5 bits (130), Expect(3) = e-111
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNT 880
+W+LCNDC+ SEV FH++ KC +C+SYNT
Sbjct: 736 VWILCNDCDMFSEVQFHIVAQKCLYCKSYNT 828
>gb|DR690385.1|DR690385 EST1080471 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACU46 3' end, mRNA sequence
Length = 912
Score = 287 bits (622), Expect(3) = e-109
Identities = 105/172 (61%), Positives = 128/172 (74%)
Frame = +2 / +1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+ LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 298 RHELPRYKVERVIRSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 477
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 478 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 657
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMH C EM H++Y+CP+CSK+ D++ WE LDQEI AT MP Y+ K+
Sbjct: 658 TMHGECLTEMKKHSQYSCPMCSKSVCDMSIIWEQLDQEIAATPMPYDYQNKM 813
Score = 178 bits (383), Expect = 9e-044
Identities = 86/147 (58%), Positives = 94/147 (63%)
Frame = -1 / -2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C IS KH CIV PQ RT + ES R
Sbjct: 791 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECFFISVKHSPCIV*PQRRTDIAFKESKR 612
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS
Sbjct: 611 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSS 432
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFV 328
NLH+ QKYSPILTPQ TC T C V
Sbjct: 431 KNLHVEQKYSPILTPQFSQTCLTFCSV 351
Score = 115 bits (245), Expect = 1e-024
Identities = 65/175 (37%), Positives = 95/175 (54%)
Frame = -3 / -1
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+L+ I RH +LLI FP I A+WT + + HF T VHC++T QN
Sbjct: 813 HLILIVIRHRCCCNLLI*LFPDYGHITD*LGAHWT*ILRVLFHFC*TFPVHCMTTTQNRY 634
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L* +K IL T+W ++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L
Sbjct: 633 CL*RIKKILKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMIL 454
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPISG 266
III + A T++L H ++T + +L L TE N FN ++ M G
Sbjct: 453 LL*DIIIKELAR*TEILPHFNTTVFTNLLDILLSVTERTNNPFNFVSWELMAQQG 289
Score = 85.8 bits (181), Expect(3) = e-109
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+DR + G M HGC HYRRRC+I APCCN+++ CRHCHNEA
Sbjct: 151 LDRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEA 270
Score = 63.4 bits (132), Expect(3) = e-109
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+W+LCNDC+ SEV FH++ KC +C SYNTR
Sbjct: 814 VWILCNDCDMFSEVQFHIVAQKCLNCNSYNTR 909
>gb|CO167405.1|CO167405 FLD1_68_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_68_F03_A029 5', mRNA sequence
Length = 873
Score = 293 bits (634), Expect(3) = e-108
Identities = 106/172 (61%), Positives = 129/172 (75%)
Frame = +2 / +2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+C LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 272 RHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 451
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 452 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 631
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMH C EM H++Y+CP+CSK+ D++ WE LDQEI AT MP Y+ K+
Sbjct: 632 TMHGECLTEMKKHSQYSCPMCSKSVCDMSIIWEQLDQEIAATPMPYDYQNKM 787
Score = 178 bits (383), Expect = 9e-044
Identities = 86/147 (58%), Positives = 94/147 (63%)
Frame = -1 / -1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C IS KH CIV PQ RT + ES R
Sbjct: 765 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECFFISVKHSPCIV*PQRRTDIAFKESKR 586
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS
Sbjct: 585 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSS 406
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFV 328
NLH+ QKYSPILTPQ TC T C V
Sbjct: 405 KNLHVEQKYSPILTPQFSQTCLTFCSV 325
Score = 121 bits (258), Expect = 2e-026
Identities = 67/175 (38%), Positives = 97/175 (55%)
Frame = -3 / -3
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+L+ I RH +LLIQ FP I A+WT + + HF T VHC++T QN
Sbjct: 787 HLILIVIRHRCCCNLLIQLFPDYGHITD*LGAHWT*ILRVLFHFC*TFPVHCMTTTQNRY 608
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L* +K IL T+W ++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L
Sbjct: 607 CL*RIKKILKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMIL 428
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPISG 266
III + A T++L H ++T +A+L L TE N FN ++ M G
Sbjct: 427 LL*DIIIKELAR*TEILPHFNTTVFANLLDILLSVTERTNNPFNFVSWELMAQQG 263
Score = 103 bits (220), Expect = 3e-021
Identities = 57/156 (36%), Positives = 79/156 (50%)
Frame = -2 / -2
Query: 779 DTQEA*SWLRSLDPTFPNDVSNQELF*SILDKCICYAPPFLQNMSSALCVHSSELLFLVM 600
D+ +A* L+SLDP P + L S LD I A FL N+ AL H++E + +
Sbjct: 776 DSHKA*VLLQSLDPVVPRLWTYHRLTWSTLDMNIESAFSFLLNIPRALYDHNAEQILPLK 597
Query: 599 SQIDTHNRLGNSASLSSPHTDGYHGV*QNSRTHTSHSGRSFPCHQPCICHNRCNGTALCL 420
+Q DT N+L + LSS G * S H S +G+++P PCICHN+ N
Sbjct: 596 NQKDTQNKLDSCGPLSSLRRGGPSAN*PYSNNHISGNGKNYPGLLPCICHNQHNDIVALR 417
Query: 419 YHHHKICIYHKSTLPY*LHSLCTLVTPAVLFHRVGK 312
YHH + C +++T P+* HS L HR K
Sbjct: 416 YHHQRTCTLNRNTPPF*HHSFRKLA*HFAQCHRENK 309
Score = 85.8 bits (181), Expect(3) = e-108
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +2 / +2
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+DR + G M HGC HYRRRC+I APCCN+++ CRHCHNEA
Sbjct: 125 LDRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEA 244
Score = 53.8 bits (111), Expect(3) = e-108
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRS 871
+W+LCNDC+ SEV FH++ KC +C+S
Sbjct: 788 VWILCNDCDMFSEVQFHIVAQKCLNCKS 871
>gb|CO361729.1|CO361729 NDL2_6_E02.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_E02_A029 5', mRNA sequence
Length = 777
Score = 281 bits (608), Expect(3) = e-107
Identities = 99/159 (62%), Positives = 121/159 (76%)
Frame = +2 / +2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+C LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 209 RHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 388
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 389 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 568
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEI 751
TMH C EM H++Y+CP+CSK+ D++ WE LDQE+
Sbjct: 569 TMHGECLTEMKKHSQYSCPMCSKSVCDMSIIWEQLDQEV 685
Score = 171 bits (367), Expect = 1e-041
Identities = 82/140 (58%), Positives = 88/140 (62%)
Frame = -1 / -1
Query: 747 S*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQ 568
S*S+ SQ S+ LEHIG Y C IS KH CIV PQ RT + ES RYS Q GQ
Sbjct: 681 S*SSCSQIMDISQTDLEHIGHEY*ECFFISVKHSPCIV*PQRRTDIAFKESKRYSKQTGQ 502
Query: 567 FCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQ 388
IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS NLH+ Q
Sbjct: 501 LWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSKNLHVEQ 322
Query: 387 KYSPILTPQLMHTCDTGCFV 328
KYSPILTPQ TC T C V
Sbjct: 321 KYSPILTPQFSQTCLTFCSV 262
Score = 119 bits (255), Expect = 4e-026
Identities = 64/162 (39%), Positives = 91/162 (56%)
Frame = -3 / -3
Query: 751 DLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCSL**VK*ILITDW 572
DLLIQ FP I A+WT + + HF T VHC++T QN L* +K IL T+W
Sbjct: 685 DLLIQLFPDYGHITD*LGAHWT*ILRVLFHFC*TFPVHCMTTTQNRYCL*RIKKILKTNW 506
Query: 571 AILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLPFVCIIIIKFAYI 392
++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L III + A
Sbjct: 505 TVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMILLL*DIIIKELAR* 326
Query: 391 TKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPISG 266
T++L H ++T +A+L L TE N FN ++ M G
Sbjct: 325 TEILPHFNTTVFANLLDILLSVTERTNNPFNFVSWELMAQQG 200
Score = 85.8 bits (181), Expect(3) = e-107
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +2 / +2
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+DR + G M HGC HYRRRC+I APCCN+++ CRHCHNEA
Sbjct: 62 LDRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEA 181
Score = 62.5 bits (130), Expect(3) = e-107
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2 / +2
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNT 880
++W+LCNDC+ SEV FH++ KC +C+SYNT
Sbjct: 680 EVWILCNDCDMFSEVQFHIVAQKCLNCKSYNT 775
>gb|CO161310.1|CO161310 FLD1_28_B01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_B01_A029 3', mRNA sequence
Length = 916
Score = 293 bits (634), Expect(3) = e-101
Identities = 106/172 (61%), Positives = 129/172 (75%)
Frame = +2 / -2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+C LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 831 RHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 652
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 651 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 472
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMH C EM H++Y+CP+CSK+ D++ WE LDQEI AT MP Y+ K+
Sbjct: 471 TMHGECLTEMKKHSQYSCPMCSKSVCDMSIIWEQLDQEIAATPMPYDYQNKM 316
Score = 178 bits (383), Expect = 9e-044
Identities = 86/147 (58%), Positives = 94/147 (63%)
Frame = -1 / +2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C IS KH CIV PQ RT + ES R
Sbjct: 338 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECFFISVKHSPCIV*PQRRTDIAFKESKR 517
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS
Sbjct: 518 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSS 697
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFV 328
NLH+ QKYSPILTPQ TC T C V
Sbjct: 698 KNLHVEQKYSPILTPQFSQTCLTFCSV 778
Score = 118 bits (252), Expect = 1e-025
Identities = 66/175 (37%), Positives = 96/175 (54%)
Frame = -3 / +1
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+L+ I RH +LLI FP I A+WT + + HF T VHC++T QN
Sbjct: 316 HLILIVIRHRCCCNLLI*LFPDYGHITD*LGAHWTRILRVLFHFC*TFPVHCMTTTQNRY 495
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L* +K IL T+W ++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L
Sbjct: 496 CL*RIKKILKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMIL 675
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPISG 266
III + A T++L H ++T +A+L L TE N FN ++ M G
Sbjct: 676 LL*DIIIKELAR*TEILPHFNTTVFANLLDILLSVTERTNNPFNFVSWELMAQQG 840
Score = 68.0 bits (142), Expect(3) = e-101
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2 / -2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
+W+LCNDC+ SEV FH++ KC +C+SYNTR T P
Sbjct: 315 VWILCNDCDMFSEVQFHIVAQKCLNCKSYNTRQTRGP 205
Score = 47.3 bits (97), Expect(3) = e-101
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2 / -2
Query: 203 IVAPCCNQVFPCRHCHNEA 259
I APCCN+++ CRHCHNEA
Sbjct: 915 IRAPCCNEIYDCRHCHNEA 859
>gb|DT636376.1|DT636376 EST1151307 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGR13 3' end, mRNA sequence
Length = 842
Score = 287 bits (622), Expect(3) = 5e-097
Identities = 105/172 (61%), Positives = 128/172 (74%)
Frame = +2 / +3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+ LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 306 RHELPRYKVERVIRSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 485
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 486 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 665
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMH C EM H++Y+CP+CSK+ D++ WE LDQEI AT MP Y+ K+
Sbjct: 666 TMHGECLTEMKKHSQYSCPMCSKSVCDMSIIWEQLDQEIAATPMPYDYQNKM 821
Score = 178 bits (383), Expect = 9e-044
Identities = 86/147 (58%), Positives = 94/147 (63%)
Frame = -1 / -2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C IS KH CIV PQ RT + ES R
Sbjct: 799 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECFFISVKHSPCIV*PQRRTDIAFKESKR 620
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS
Sbjct: 619 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSS 440
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFV 328
NLH+ QKYSPILTPQ TC T C V
Sbjct: 439 KNLHVEQKYSPILTPQFSQTCLTFCSV 359
Score = 115 bits (245), Expect = 1e-024
Identities = 65/175 (37%), Positives = 95/175 (54%)
Frame = -3 / -1
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+L+ I RH +LLI FP I A+WT + + HF T VHC++T QN
Sbjct: 821 HLILIVIRHRCCCNLLI*LFPDYGHITD*LGAHWT*ILRVLFHFC*TFPVHCMTTTQNRY 642
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L* +K IL T+W ++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L
Sbjct: 641 CL*RIKKILKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMIL 462
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPISG 266
III + A T++L H ++T + +L L TE N FN ++ M G
Sbjct: 461 LL*DIIIKELAR*TEILPHFNTTVFTNLLDILLSVTERTNNPFNFVSWELMAQQG 297
Score = 85.8 bits (181), Expect(3) = 5e-097
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+DR + G M HGC HYRRRC+I APCCN+++ CRHCHNEA
Sbjct: 159 LDRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEA 278
Score = 22.1 bits (42), Expect(3) = 5e-097
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = +2 / +3
Query: 788 IWVLCND 808
+W+LCND
Sbjct: 822 VWILCND 842
>gb|DR181347.1|DR181347 RTMNUT1_38_G12.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_G12_A029 3', mRNA sequence
Length = 808
Score = 268 bits (580), Expect(2) = 2e-090
Identities = 94/152 (61%), Positives = 115/152 (75%)
Frame = +2 / -1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+C LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 457 RHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 278
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 277 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 98
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHW 730
TMH C EM H++Y+CP+CSK+ D++ W
Sbjct: 97 TMHGECLTEMKEHSQYSCPMCSKSVCDMSIIW 2
Score = 169 bits (363), Expect = 5e-041
Identities = 77/129 (59%), Positives = 83/129 (64%)
Frame = -1 / +3
Query: 714 SRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*W 535
S+ LEHIG Y C+ IS KH CIV PQ RT + ES RYS Q GQ IEFST W
Sbjct: 18 SQTDLEHIGHEY*ECSFISVKHSPCIV*PQRRTDIAFKESKRYSKQTGQLWPIEFSTQGW 197
Query: 534 LSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLM 355
+T *Q PHF QWKK S PPTLHMPQS Q YC +SSS NLH+ QKYSPILTPQ
Sbjct: 198 PFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSKNLHVEQKYSPILTPQFS 377
Query: 354 HTCDTGCFV 328
TC T C V
Sbjct: 378 QTCLTFCSV 404
Score = 107 bits (228), Expect = 2e-022
Identities = 55/144 (38%), Positives = 82/144 (56%)
Frame = -3 / +2
Query: 697 AYWTSVFVMRHHFFKTCQVHCVSTVQNSCSL**VK*ILITDWAILPH*VLHTLMVITEYN 518
A+WT + + HF T VHC++T QN L* +K IL T+W ++ H*VL+ + + + N
Sbjct: 35 AHWT*ILRVLFHFC*TFPVHCMTTTQNRYCL*RIKKILKTNWTVVAH*VLYAGVALLQTN 214
Query: 517 RIAGPTLHTVEEVFLATNPAYATIDAMVLPFVCIIIIKFAYITKVLSHIDSTAYAHL*HR 338
RIA T +E++ A+ PAYATI M+L III + A T++L H ++T + +L
Sbjct: 215 RIATTTFLAMEKIIPASYPAYATISTMILLL*DIIIKELAR*TEILPHFNTTVFTNLLDI 394
Query: 337 LFCFTE*ANYFFNILTTYCMPISG 266
L TE N FN ++ M G
Sbjct: 395 LLSVTERTNNPFNFVSWELMAQQG 466
Score = 85.8 bits (181), Expect(2) = 2e-090
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +2 / -1
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+DR + G M HGC HYRRRC+I APCCN+++ CRHCHNEA
Sbjct: 604 LDRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEA 485
>gb|DR089158.1|DR089158 RTAL1_6_H06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_6_H06_A029 5', mRNA sequence
Length = 749
Score = 275 bits (595), Expect(2) = 4e-088
Identities = 95/173 (54%), Positives = 126/173 (72%)
Frame = +2 / +2
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV+MG+YFC+ C F+DD+ K QYHC C
Sbjct: 47 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVSMGKYFCEKCNFFDDEDSKQQYHCDGC 226
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CYS+ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 227 GICRTGGKDNFFHCYKCGCCYSIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 406
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
HT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K+
Sbjct: 407 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMPEAYQNKM 565
Score = 140 bits (301), Expect = 2e-032
Identities = 75/166 (45%), Positives = 85/166 (51%)
Frame = -1 / -3
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 543 GIGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 364
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + E*Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 363 YSKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 184
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
LH SQKY PI TPQ+ C T C V R CLS
Sbjct: 183 KKLHFSQKYFPIETPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLS 46
Score = 105 bits (223), Expect = 1e-021
Identities = 59/173 (34%), Positives = 93/173 (53%)
Frame = -3 / -2
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+ V + RH +L ++ P I F A+WTS M H F+ V+ V+T Q +
Sbjct: 565 HFVLVSFRHWSQSNLSVKFLPQFRHITDRFGAHWTSKLKMLVHLFQAMHVNSVTTRQYAD 386
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L V+*IL T A++ H HT + I + +R+A T TVEE+ A + A +T +VL
Sbjct: 385 KLCRVE*ILKTHRAVVVHCFFHTRVAILQLDRVATSTFITVEEIIFAASSANSTSVTVVL 206
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPI 272
F ++I + A+ T+VLSH ++T+ A L + LF T+* + N + Y M +
Sbjct: 205 LF*VLVIKEIAFFTEVLSHRNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSV 47
Score = 71.2 bits (149), Expect(2) = 4e-088
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / +2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+W+LCNDC SEVNFH++ HKC C SYNTR T
Sbjct: 566 VWILCNDCGVTSEVNFHIVAHKCQSCNSYNTRQT 667
>gb|DR118504.1|DR118504 RTMG1_17_A03.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_A03_A029 5', mRNA sequence
Length = 641
Score = 293 bits (634), Expect(2) = 2e-087
Identities = 106/172 (61%), Positives = 129/172 (75%)
Frame = +2 / +2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R VE+V+C LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 47 RHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 226
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGH
Sbjct: 227 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGH 406
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMH C EM H++Y+CP+CSK+ D++ WE LDQEI AT MP Y+ K+
Sbjct: 407 TMHGECLTEMKKHSQYSCPMCSKSVCDMSIIWEQLDQEIAATPMPYDYQNKM 562
Score = 178 bits (383), Expect = 9e-044
Identities = 86/147 (58%), Positives = 94/147 (63%)
Frame = -1 / -3
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C IS KH CIV PQ RT + ES R
Sbjct: 540 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECFFISVKHSPCIV*PQRRTDIAFKESKR 361
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS
Sbjct: 360 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSS 181
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFV 328
NLH+ QKYSPILTPQ TC T C V
Sbjct: 180 KNLHVEQKYSPILTPQFSQTCLTFCSV 100
Score = 121 bits (258), Expect = 2e-026
Identities = 67/175 (38%), Positives = 97/175 (55%)
Frame = -3 / -2
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+L+ I RH +LLIQ FP I A+WT + + HF T VHC++T QN
Sbjct: 562 HLILIVIRHRCCCNLLIQLFPDYGHITD*LGAHWT*ILRVLFHFC*TFPVHCMTTTQNRY 383
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L* +K IL T+W ++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L
Sbjct: 382 CL*RIKKILKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMIL 203
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPISG 266
III + A T++L H ++T +A+L L TE N FN ++ M G
Sbjct: 202 LL*DIIIKELAR*TEILPHFNTTVFANLLDILLSVTERTNNPFNFVSWELMAQQG 38
Score = 103 bits (220), Expect = 3e-021
Identities = 57/156 (36%), Positives = 79/156 (50%)
Frame = -2 / -1
Query: 779 DTQEA*SWLRSLDPTFPNDVSNQELF*SILDKCICYAPPFLQNMSSALCVHSSELLFLVM 600
D+ +A* L+SLDP P + L S LD I A FL N+ AL H++E + +
Sbjct: 551 DSHKA*VLLQSLDPVVPRLWTYHRLTWSTLDMNIESAFSFLLNIPRALYDHNAEQILPLK 372
Query: 599 SQIDTHNRLGNSASLSSPHTDGYHGV*QNSRTHTSHSGRSFPCHQPCICHNRCNGTALCL 420
+Q DT N+L + LSS G * S H S +G+++P PCICHN+ N
Sbjct: 371 NQKDTQNKLDSCGPLSSLRRGGPSAN*PYSNNHISGNGKNYPGLLPCICHNQHNDIVALR 192
Query: 419 YHHHKICIYHKSTLPY*LHSLCTLVTPAVLFHRVGK 312
YHH + C +++T P+* HS L HR K
Sbjct: 191 YHHQRTCTLNRNTPPF*HHSFRKLA*HFAQCHRENK 84
Score = 51.0 bits (105), Expect(2) = 2e-087
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHC 865
+W+LCNDC+ SEV FH++ KC +C
Sbjct: 563 VWILCNDCDMFSEVQFHIVAQKCLNC 640
>gb|DT636926.1|DT636926 EST1151857 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGX65 3' end, mRNA sequence
Length = 844
Score = 272 bits (589), Expect(2) = 3e-087
Identities = 94/173 (54%), Positives = 125/173 (72%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 114 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 293
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 294 GICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 473
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
HT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K+
Sbjct: 474 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMPQAYQNKM 632
Score = 138 bits (296), Expect(2) = 8e-038
Identities = 74/166 (44%), Positives = 84/166 (50%)
Frame = -1 / -1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 610 GIGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 431
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + *Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 430 YSKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 251
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
LH SQKY PI TPQ+ C T C V R CLS
Sbjct: 250 KKLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLS 113
Score = 103 bits (220), Expect = 3e-021
Identities = 58/173 (33%), Positives = 92/173 (53%)
Frame = -3 / -3
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+ V + RH +L ++ P I F A+WTS M H F+ V+ V+T Q +
Sbjct: 632 HFVLVSLRHWSQSNLSVKFLPQFRHITDRFGAHWTSKLKMLVHLFQAMHVNSVTTRQYAD 453
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L V+*IL T A++ H HT + I + + +A T TVEE+ A + A +T +VL
Sbjct: 452 KLCRVE*ILKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVL 273
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPI 272
F ++I + A+ T+VLSH ++T+ A L + LF T+* + N + Y M +
Sbjct: 272 LF*VLVIKEIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSV 114
Score = 79.9 bits (168), Expect(2) = 8e-028
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2 / +3
Query: 176 CEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
C HY RRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 3 CSHYHRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 134
Score = 71.2 bits (149), Expect(2) = 3e-087
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+W+LCNDC SEVNFH++ HKC C SYNTR T
Sbjct: 633 VWILCNDCGVTSEVNFHIVAHKCQSCNSYNTRQT 734
Score = 65.2 bits (136), Expect(2) = 8e-028
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / +2
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 146 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 325
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 326 LPLL*MWMLL 355
Score = 40.0 bits (81), Expect(2) = 8e-038
Identities = 20/33 (60%), Positives = 21/33 (63%)
Frame = -1 / -1
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSH 175
S E +ASL Q Q T LQHGA I HLR *C H
Sbjct: 100 SIEFLASL*QCLQSKTSLQHGALIWHLRW*CEH 2
>gb|CX649335.1|CX649335 COLD1_34_C03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_34_C03_A029 5', mRNA sequence
Length = 699
Score = 275 bits (595), Expect(2) = 4e-086
Identities = 95/173 (54%), Positives = 126/173 (72%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV+MG+YFC+ C F+DD+ K QYHC C
Sbjct: 91 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVSMGKYFCEKCNFFDDEDSKQQYHCDGC 270
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CYS+ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 271 GICRTGGKDNFFHCYKCGCCYSIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 450
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
HT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K+
Sbjct: 451 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMPEAYQNKM 609
Score = 140 bits (301), Expect(2) = 2e-034
Identities = 75/166 (45%), Positives = 85/166 (51%)
Frame = -1 / -2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 587 GIGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 408
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + E*Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 407 YSKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 228
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
LH SQKY PI TPQ+ C T C V R CLS
Sbjct: 227 KKLHFSQKYFPIETPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLS 90
Score = 105 bits (223), Expect = 1e-021
Identities = 59/173 (34%), Positives = 93/173 (53%)
Frame = -3 / -1
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+ V + RH +L ++ P I F A+WTS M H F+ V+ V+T Q +
Sbjct: 609 HFVLVSFRHWSQSNLSVKFLPQFRHITDRFGAHWTSKLKMLVHLFQAMHVNSVTTRQYAD 430
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L V+*IL T A++ H HT + I + +R+A T TVEE+ A + A +T +VL
Sbjct: 429 KLCRVE*ILKTHRAVVVHCFFHTRVAILQLDRVATSTFITVEEIIFAASSANSTSVTVVL 250
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPI 272
F ++I + A+ T+VLSH ++T+ A L + LF T+* + N + Y M +
Sbjct: 249 LF*VLVIKEIAFFTEVLSHRNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSV 91
Score = 68.0 bits (142), Expect(2) = 5e-024
Identities = 37/82 (45%), Positives = 47/82 (57%)
Frame = +1 / +3
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 123 KGYLFTL*N*TRCSAKLRYLWCFYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 302
Query: 484 LPLCEVWVLLFCYTP**PSVCG 549
LPL +W+LL P +CG
Sbjct: 303 LPLL*MWMLLLYPIEGLPPLCG 368
Score = 64.8 bits (135), Expect(2) = 4e-086
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYN 877
+W+LCNDC SEVNFH++ HKC C SYN
Sbjct: 610 VWILCNDCGVTSEVNFHIVAHKCQSCNSYN 699
Score = 64.3 bits (134), Expect(2) = 5e-024
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 197 CKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
C+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 1 CQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 111
Score = 26.3 bits (51), Expect(2) = 2e-034
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / -2
Query: 273 SPEAVASLWQWRQGNTWLQHGATI 202
S E +ASL Q Q T LQHGA I
Sbjct: 77 SIEFLASL*QCLQSKTSLQHGALI 6
>gb|CO166121.1|CO166121 FLD1_59_B03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_B03_A029 5', mRNA sequence
Length = 835
Score = 267 bits (577), Expect(2) = 3e-085
Identities = 90/166 (54%), Positives = 124/166 (74%)
Frame = +2 / +1
Query: 290 RQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCGICRVG 469
R ++++V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CGICR G
Sbjct: 10 RHNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTG 189
Query: 470 GKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLT 649
G++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + VL CGHT+H+
Sbjct: 190 GRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINVLPCGHTIHMD 369
Query: 650 CFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K
Sbjct: 370 CLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDEEVALTPMPESYQNK 507
Score = 144 bits (310), Expect = 1e-033
Identities = 73/150 (48%), Positives = 86/150 (57%)
Frame = -1 / -3
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +
Sbjct: 497 YDSGIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 318
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +
Sbjct: 317 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEI 138
Query: 417 SSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
SSS +L +SQKY P+ TPQL+HT T C V
Sbjct: 137 SSSNSLQVSQKYFPMQTPQLIHT**TSCSV 48
Score = 69.8 bits (146), Expect(2) = 3e-085
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
KIW+LCNDCN SEV FH++ KC +C SYNTR T
Sbjct: 508 KIWILCNDCNATSEVPFHIVAQKCLNCNSYNTRQT 612
>gb|DR165420.1|DR165420 RTPHOS1_5_A09.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_5_A09_A029 3', mRNA sequence
Length = 859
Score = 266 bits (575), Expect(2) = 2e-084
Identities = 96/153 (62%), Positives = 115/153 (75%)
Frame = +2 / +1
Query: 332 KQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSC 511
+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCGICRVGG++NFFHC KCG C
Sbjct: 1 EQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCGICRVGGRDNFFHCQKCGCC 180
Query: 512 YSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCP 691
Y+V L+ H CVENSM NCP+C+EYLFDSL+ VL CGHTMH C EM H++Y+CP
Sbjct: 181 YTVSLQKGHPCVENSMGHNCPVCFEYLFDSLKAISVLRCGHTMHGECLTEMKEHSQYSCP 360
Query: 692 ICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
+CSK+ D++ WE LDQEI AT MP Y+ K+
Sbjct: 361 MCSKSVCDMSIIWEQLDQEIAATPMPYDYQNKM 459
Score = 178 bits (384), Expect = 7e-044
Identities = 85/145 (58%), Positives = 94/145 (64%)
Frame = -1 / -3
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C+ IS KH CIV PQ RT + ES R
Sbjct: 437 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECSFISVKHSPCIV*PQRRTDIAFKESKR 258
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC +SSS
Sbjct: 257 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSS 78
Query: 408 *NLHISQKYSPILTPQLMHTCDTGC 334
NLH+ QKYSPILTPQ TC T C
Sbjct: 77 KNLHVEQKYSPILTPQFSQTCLTFC 3
Score = 107 bits (229), Expect = 2e-022
Identities = 57/148 (38%), Positives = 85/148 (57%)
Frame = -3 / -2
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+L+ I RH +LLI FP I A+WT + + HF T VHC++T QN
Sbjct: 459 HLILIVIRHRCCCNLLI*LFPDYGHITD*LGAHWT*ILRVLFHFC*TFPVHCMTTTQNRY 280
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L* +K IL T+W ++ H*VL+ + + + NRIA T +E++ A+ PAYATI M+L
Sbjct: 279 CL*RIKKILKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMIL 100
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL 347
III + A T++L H ++T + +L
Sbjct: 99 LL*DIIIKELAR*TEILPHFNTTVFTNL 16
Score = 68.4 bits (143), Expect(2) = 2e-084
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
+W+LCNDC+ SEV FH++ KC +C+SYNTR T P
Sbjct: 460 VWILCNDCDMFSEVQFHIVAQKCLYCKSYNTRQTRGP 570
>gb|DR024659.1|DR024659 STRS1_66_C04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_C04_A034 5', mRNA sequence
Length = 643
Score = 240 bits (518), Expect(2) = 2e-077
Identities = 81/146 (55%), Positives = 108/146 (73%)
Frame = +2 / +3
Query: 353 CISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRD 532
C++CGV+MG+YFC+ C F+DD+ K QYHC CGICR GGK+NFFHC KCG CYS+ L+D
Sbjct: 6 CVTCGVSMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFFHCYKCGCCYSIQLKD 185
Query: 533 NHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTAL 712
H CVE +M NCP+C+EYLFDS + VL CGHT+H+ C +EM H ++ CP+CSK+
Sbjct: 186 CHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCGHTIHMHCLKEMHEHLQFACPVCSKSVC 365
Query: 713 DLTHHWEMLDQEIEATIMPLVYRYKI 790
D++ WE LD+E+ T MP Y+ K+
Sbjct: 366 DMSKLWEKLDREVALTPMPEAYQNKM 443
Score = 131 bits (281), Expect = 1e-029
Identities = 67/137 (48%), Positives = 77/137 (56%)
Frame = -1 / -1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 421 GIGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 242
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + E*Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 241 YSKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 62
Query: 408 *NLHISQKYSPILTPQL 358
LH SQKY PI TPQ+
Sbjct: 61 KKLHFSQKYFPIETPQV 11
Score = 71.2 bits (149), Expect(2) = 2e-077
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+W+LCNDC SEVNFH++ HKC C SYNTR T
Sbjct: 444 VWILCNDCGVTSEVNFHIVAHKCQSCNSYNTRQT 545
>gb|BE496399.1|BE496399 NXCI_017_D12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_017_D12 5' similar to Arabidopsis
thaliana sequence At5g22920 PGPD14 protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 575
Score = 253 bits (548), Expect(2) = 2e-077
Identities = 88/162 (54%), Positives = 115/162 (70%)
Frame = +2 / +1
Query: 305 KVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCGICRVGGKENF 484
KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC CGICR GGK+NF
Sbjct: 4 KVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNF 183
Query: 485 FHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEM 664
FHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CGHT+H+ C +EM
Sbjct: 184 FHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCGHTIHMHCLKEM 363
Query: 665 VAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
H ++ CP+CSK+ D++ WE LD+ T MP Y K+
Sbjct: 364 HEHLQFACPVCSKSVCDMSKLWEKLDRXXALTPMPEAYXXKM 489
Score = 135 bits (290), Expect = 6e-031
Identities = 69/147 (46%), Positives = 79/147 (53%)
Frame = -1 / -1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 467 GIGVKAXXRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 288
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + *Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 287 YSKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 108
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFV 328
LH SQKY PI TPQ+ C T C V
Sbjct: 107 KKLHFSQKYFPIQTPQVTQFC*TSCSV 27
Score = 57.0 bits (118), Expect(2) = 2e-077
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRS 871
+W+LCNDC SEVNFH+ HKC C S
Sbjct: 490 VWILCNDCGVTSEVNFHIXAHKCQSCNS 573
>gb|CO164159.1|CO164159 FLD1_46_E06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_E06_A029 3', mRNA sequence
Length = 911
Score = 272 bits (588), Expect(2) = 5e-076
Identities = 94/173 (54%), Positives = 125/173 (72%)
Frame = +2 / -3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 564 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 385
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 384 GICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 205
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
HT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K+
Sbjct: 204 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMPEAYQNKM 46
Score = 137 bits (294), Expect(2) = 1e-039
Identities = 74/166 (44%), Positives = 83/166 (50%)
Frame = -1 / +2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 68 GXGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 247
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + *Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 248 YSKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 427
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
LH SQKY PI TPQ+ C T C V R CLS
Sbjct: 428 KKLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLS 565
Score = 104 bits (222), Expect = 1e-021
Identities = 58/173 (33%), Positives = 92/173 (53%)
Frame = -3 / +1
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+ V + RH +L ++ P I F A+WTS M H F+ V+ V+T Q +
Sbjct: 46 HFVLVSFRHXSQSNLSVKFLPQFRHITDRFGAHWTSKLKMLVHLFQAMHVNSVTTRQYAD 225
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L V+*IL T A++ H HT + I + + +A T TVEE+ A + A +T +VL
Sbjct: 226 KLCRVE*ILKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVL 405
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPI 272
F ++I + A+ T+VLSH ++T+ A L + LF T+* + N + Y M +
Sbjct: 406 LF*VLVIKEIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSV 564
Score = 90.9 bits (192), Expect(2) = 4e-031
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2 / -3
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 708 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 544
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / -2
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 532 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 353
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 352 LPLL*MWMLL 323
Score = 46.9 bits (96), Expect(2) = 1e-039
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / +2
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 578 SIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHP 679
Score = 34.1 bits (68), Expect(2) = 5e-076
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2 / -3
Query: 788 IWVLCNDCNKVSEVN 832
+W+LCNDC SEVN
Sbjct: 45 VWILCNDCGVTSEVN 1
>gb|CX649763.1|CX649763 COLD1_41_H01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_H01_A029 3', mRNA sequence
Length = 753
Score = 234 bits (505), Expect(2) = 1e-075
Identities = 80/143 (55%), Positives = 105/143 (73%)
Frame = +2 / -2
Query: 362 CGVNMGEYFCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQ 541
CGV+MG+YFC+ C F+DD+ K QYHC CGICR GGK+NFFHC KCG CYS+ L+D H
Sbjct: 752 CGVSMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFFHCYKCGCCYSIQLKDCHP 573
Query: 542 CVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLT 721
CVE +M NCP+C+EYLFDS + VL CGHT+H+ C +EM H ++ CP+CSK+ D++
Sbjct: 572 CVEKAMHHNCPVCFEYLFDSTKLISVLPCGHTIHMHCLKEMHEHLQFACPVCSKSVCDMS 393
Query: 722 HHWEMLDQEIEATIMPLVYRYKI 790
WE LD+E+ T MP Y+ K+
Sbjct: 392 KLWEKLDREVALTPMPEAYQNKM 324
Score = 131 bits (280), Expect = 1e-029
Identities = 67/136 (49%), Positives = 76/136 (55%)
Frame = -1 / +1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 346 GIGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 525
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + E*Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 526 YSKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 705
Query: 408 *NLHISQKYSPILTPQ 361
LH SQKY PI TPQ
Sbjct: 706 KKLHFSQKYFPIETPQ 753
Score = 71.2 bits (149), Expect(2) = 1e-075
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / -2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+W+LCNDC SEVNFH++ HKC C SYNTR T
Sbjct: 323 VWILCNDCGVTSEVNFHIVAHKCQSCNSYNTRQT 222
>gb|CF664723.1|CF664723 RTCNT1_11_C09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_11_C09_A029 5', mRNA sequence
Length = 673
Score = 272 bits (589), Expect(2) = 2e-075
Identities = 92/171 (53%), Positives = 127/171 (74%)
Frame = +2 / +1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R ++++V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CG
Sbjct: 130 RHDVPRHNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCG 309
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + VL CGH
Sbjct: 310 ICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINVLPCGH 489
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
T+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K
Sbjct: 490 TIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDEEVALTPMPESYQNK 642
Score = 144 bits (310), Expect(2) = 3e-039
Identities = 73/150 (48%), Positives = 86/150 (57%)
Frame = -1 / -3
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +
Sbjct: 632 YDSGIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 453
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +
Sbjct: 452 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEI 273
Query: 417 SSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
SSS +L +SQKY P+ TPQL+HT T C V
Sbjct: 272 SSSNSLQVSQKYFPMQTPQLIHT**TSCSV 183
Score = 77.6 bits (163), Expect(2) = 2e-030
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +2 / +1
Query: 164 MKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
+++GC HY+RRC+I APCCN+VF CRHCHNEA S + R DV +
Sbjct: 4 LQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 147
Score = 76.2 bits (160), Expect(2) = 2e-030
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +1 / +3
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*+ +SV+ LW +G VLL* +Q +***Y + A+PL +W+M WWQG
Sbjct: 159 KGHLFTL*H*ARCSSSVY*LWRLHGEVLL*NLQAI***YLKTAIPL*WMWYM*NWWQG*F 338
Query: 484 LPLCEVWVLLFCYTP**PSVC 546
LPL +W+LLF Y S+C
Sbjct: 339 LPLL*MWLLLFDYVEGLSSLC 401
Score = 38.6 bits (78), Expect(2) = 3e-039
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -3
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E ASL Q Q T LQHGA I HLR *C P
Sbjct: 107 EFFASL*QCLQSKTSLQHGALIRHLRL*CEQP 12
Score = 31.8 bits (63), Expect(2) = 2e-075
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 785 KIWVLCNDCN 814
KIW+LCNDCN
Sbjct: 644 KIWILCNDCN 673
>gb|CO164009.1|CO164009 FLD1_45_E07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_E07_A029 3', mRNA sequence
Length = 909
Score = 272 bits (588), Expect(2) = 3e-075
Identities = 94/173 (54%), Positives = 125/173 (72%)
Frame = +2 / -3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 562 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 383
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 382 GICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 203
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
HT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K+
Sbjct: 202 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMPEAYQNKM 44
Score = 137 bits (294), Expect(2) = 1e-039
Identities = 74/166 (44%), Positives = 83/166 (50%)
Frame = -1 / +3
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 66 GXGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 245
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + *Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 246 YSKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 425
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
LH SQKY PI TPQ+ C T C V R CLS
Sbjct: 426 KKLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLS 563
Score = 104 bits (222), Expect = 1e-021
Identities = 58/173 (33%), Positives = 92/173 (53%)
Frame = -3 / +2
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+ V + RH +L ++ P I F A+WTS M H F+ V+ V+T Q +
Sbjct: 44 HFVLVSFRHXSQSNLSVKFLPQFRHITDRFGAHWTSKLKMLVHLFQAMHVNSVTTRQYAD 223
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L V+*IL T A++ H HT + I + + +A T TVEE+ A + A +T +VL
Sbjct: 224 KLCRVE*ILKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVL 403
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPI 272
F ++I + A+ T+VLSH ++T+ A L + LF T+* + N + Y M +
Sbjct: 404 LF*VLVIKEIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSV 562
Score = 90.9 bits (192), Expect(2) = 4e-031
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2 / -3
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 706 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 542
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / -2
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 530 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 351
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 350 LPLL*MWMLL 321
Score = 46.9 bits (96), Expect(2) = 1e-039
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / +3
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 576 SIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHP 677
Score = 31.3 bits (62), Expect(2) = 3e-075
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 788 IWVLCNDCNKVSEV 829
+W+LCNDC SEV
Sbjct: 43 VWILCNDCGVTSEV 2
>gb|DR050795.1|DR050795 RTBOR1_25_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_E10_A029 5', mRNA sequence
Length = 833
Score = 232 bits (501), Expect(2) = 9e-075
Identities = 78/142 (54%), Positives = 104/142 (73%)
Frame = +2 / +2
Query: 362 CGVNMGEYFCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQ 541
CGV MG+YFC+ CK +DDD K QYHC CGICR GG++NFFHC KCG CYS++L+D H
Sbjct: 2 CGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHP 181
Query: 542 CVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLT 721
CVE +M NCP+C+E+LF+S + VL CGHT+H+ C +EM H ++ CP+CSK+ D++
Sbjct: 182 CVEGAMHHNCPVCFEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMS 361
Query: 722 HHWEMLDQEIEATIMPLVYRYK 787
WE LD+E+ T MP Y+ K
Sbjct: 362 KVWEKLDEEVALTPMPESYQNK 427
Score = 133 bits (284), Expect = 4e-030
Identities = 67/139 (48%), Positives = 79/139 (56%)
Frame = -1 / -3
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +
Sbjct: 417 YDSGIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 238
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +
Sbjct: 237 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEI 58
Query: 417 SSS*NLHISQKYSPILTPQ 361
SSS +L +SQKY P+ TPQ
Sbjct: 57 SSSNSLQVSQKYFPMQTPQ 1
Score = 69.8 bits (146), Expect(2) = 9e-075
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / +2
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
KIW+LCNDCN SEV FH++ KC +C SYNTR T
Sbjct: 428 KIWILCNDCNATSEVPFHIVAQKCLNCNSYNTRQT 532
>gb|CF390785.1|CF390785 RTDR2_17_H10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_17_H10_A021 5', mRNA
sequence
Length = 798
Score = 265 bits (574), Expect(2) = 8e-074
Identities = 93/173 (53%), Positives = 124/173 (71%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 217 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 396
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 397 GICRTGGKDNFFHCYKCGCCYAIELKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 576
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
HT+H+ C +EM H ++ CP+CSK+ D++ E LD+E+ T MP Y+ K+
Sbjct: 577 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLREKLDREVALTPMPEAYQNKM 735
Score = 138 bits (295), Expect(2) = 1e-039
Identities = 74/166 (44%), Positives = 84/166 (50%)
Frame = -1 / -2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 713 GIGVKATSRSSFSLNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 534
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + *Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 533 YSKHTGQLWCIAFSTQGWQSFNSIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 354
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
LH SQKY PI TPQ+ C T C V R CLS
Sbjct: 353 KKLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLS 216
Score = 105 bits (223), Expect = 1e-021
Identities = 58/173 (33%), Positives = 93/173 (53%)
Frame = -3 / -1
Query: 790 NLVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSC 611
+ V + RH +L ++ P I F A+WTS M H F+ V+ V+T Q +
Sbjct: 735 HFVLVSFRHWSQSNLSVKFLPQFRHITDRFGAHWTSKLKMLVHLFQAMHVNSVTTRQYAD 556
Query: 610 SL**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVL 431
L V+*IL T A++ H HT + I +++ +A T TVEE+ A + A +T +VL
Sbjct: 555 KLCRVE*ILKTHRAVVVHCFFHTRVAILQFDSVATSTFITVEEIIFAASSANSTSVTVVL 376
Query: 430 PFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPI 272
F ++I + A+ T+VLSH ++T+ A L + LF T+* + N + Y M +
Sbjct: 375 LF*VLVIKEIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSV 217
Score = 90.9 bits (192), Expect(2) = 4e-031
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 73 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 237
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / +3
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 249 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 428
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 429 LPLL*MWMLL 458
Score = 46.9 bits (96), Expect(2) = 1e-039
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 203 SIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHP 102
Score = 33.1 bits (66), Expect(2) = 8e-074
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVI 844
+W+LCNDC SEV F ++
Sbjct: 736 VWILCNDCGVTSEVIFTLL 792
>gb|DR686844.1|DR686844 EST1076922 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABK47 3' end, mRNA sequence
Length = 710
Score = 210 bits (454), Expect(2) = 4e-073
Identities = 74/111 (66%), Positives = 87/111 (78%)
Frame = +2 / +3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH R VE+V+C LC+T+Q V QVC +CGV MGEYFC CKF+DDD K QYHC DCG
Sbjct: 372 RHEFPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHCADCG 551
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQ 607
ICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL+
Sbjct: 552 ICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSLK 704
Score = 133 bits (284), Expect = 4e-030
Identities = 58/91 (63%), Positives = 61/91 (67%)
Frame = -1 / -2
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC
Sbjct: 697 ESKRYSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFE 518
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
+SSS NLH+ QKYSPILTPQ TC T C V
Sbjct: 517 ISSSKNLHVEQKYSPILTPQFSQTCLTFCSV 425
Score = 85.8 bits (181), Expect(2) = 4e-073
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+DR + G M HGC HYRRRC+I APCCN+++ CRHCHNEA
Sbjct: 225 LDRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEA 344
>gb|CO162341.1|CO162341 FLD1_34_E09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_E09_A029 5', mRNA sequence
Length = 858
Score = 271 bits (586), Expect = 9e-072
Identities = 93/166 (56%), Positives = 122/166 (73%)
Frame = +2 / +2
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV+MG+YFC+ C F+DD+ K QYHC C
Sbjct: 353 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVSMGKYFCEKCNFFDDEDSKQQYHCDGC 532
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CYS+ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 533 GICRTGGKDNFFHCYKCGCCYSIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 712
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMP 769
HT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP
Sbjct: 713 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMP 850
Score = 139 bits (299), Expect(2) = 3e-040
Identities = 75/166 (45%), Positives = 84/166 (50%)
Frame = -1 / -1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 849 GXGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 670
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + E*Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 669 YSKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 490
Query: 408 *NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
LH SQKY PI TPQ+ C T C V R CLS
Sbjct: 489 KKLHFSQKYFPIETPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLS 352
Score = 105 bits (223), Expect = 1e-021
Identities = 58/166 (34%), Positives = 90/166 (54%)
Frame = -3 / -3
Query: 769 RHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCSL**VK* 590
RH +L ++ P I F A+WTS M H F+ V+ V+T Q + L V+*
Sbjct: 850 RHXSQSNLSVKFLPQFRHITDRFGAHWTSKLKMLVHLFQAMHVNSVTTRQYADKLCRVE* 671
Query: 589 ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLPFVCIII 410
IL T A++ H HT + I + +R+A T TVEE+ A + A +T +VL F ++I
Sbjct: 670 ILKTHRAVVVHCFFHTRVAILQLDRVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVI 491
Query: 409 IKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILTTYCMPI 272
+ A+ T+VLSH ++T+ A L + LF T+* + N + Y M +
Sbjct: 490 KEIAFFTEVLSHRNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSV 353
Score = 90.9 bits (192), Expect(2) = 6e-032
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2 / +2
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 209 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 373
Score = 68.0 bits (142), Expect(2) = 6e-032
Identities = 37/82 (45%), Positives = 47/82 (57%)
Frame = +1 / +1
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 385 KGYLFTL*N*TRCSAKLRYLWCFYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 564
Query: 484 LPLCEVWVLLFCYTP**PSVCG 549
LPL +W+LL P +CG
Sbjct: 565 LPLL*MWMLLLYPIEGLPPLCG 630
Score = 46.9 bits (96), Expect(2) = 3e-040
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 339 SIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHP 238
>gb|CO197932.1|CO197932 GEO1_10_D09.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_10_D09_A029 3', mRNA sequence
Length = 733
Score = 219 bits (473), Expect(2) = 6e-071
Identities = 73/135 (54%), Positives = 98/135 (72%)
Frame = +2 / -2
Query: 383 YFCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMR 562
YFC+ CK +DDD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 732 YFCETCKLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMH 553
Query: 563 QNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLD 742
NCP+C+E+LF+S + VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD
Sbjct: 552 HNCPVCFEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLD 373
Query: 743 QEIEATIMPLVYRYK 787
+E+ T MP Y+ K
Sbjct: 372 EEVALTPMPESYQNK 328
Score = 121 bits (258), Expect = 2e-026
Identities = 62/129 (48%), Positives = 73/129 (56%)
Frame = -1 / +2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +SNR
Sbjct: 347 GIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVDSNR 526
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +SSS
Sbjct: 527 NSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSS 706
Query: 408 *NLHISQKY 382
+L +SQKY
Sbjct: 707 NSLQVSQKY 733
Score = 69.8 bits (146), Expect(2) = 6e-071
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / -2
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
KIW+LCNDCN SEV FH++ KC +C SYNTR T
Sbjct: 327 KIWILCNDCNATSEVPFHIVAQKCLNCNSYNTRQT 223
>gb|CX648134.1|CX648134 COLD1_26_F04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_F04_A029 5', mRNA sequence
Length = 797
Score = 264 bits (571), Expect = 1e-069
Identities = 87/159 (54%), Positives = 121/159 (76%)
Frame = +2 / +3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R ++++V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CG
Sbjct: 318 RHDVPRHNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCG 497
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + VL CGH
Sbjct: 498 ICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINVLPCGH 677
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEI 751
T+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+
Sbjct: 678 TIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDEEV 794
Score = 139 bits (299), Expect(2) = 8e-038
Identities = 69/138 (50%), Positives = 80/138 (57%)
Frame = -1 / -2
Query: 741 SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFC 562
S+ SQ S+ EH GQ C IS K IVCPQ TL+ +SNR S Q GQ
Sbjct: 784 SSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVDSNRNSKQTGQLW 605
Query: 561 LIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKY 382
I ST S +I E*Q PH QWKK SLPP LH+P QWYC +SSS +L +SQKY
Sbjct: 604 CIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSNSLQVSQKY 425
Query: 381 SPILTPQLMHTCDTGCFV 328
P+ TPQL+HT T C V
Sbjct: 424 FPMQTPQLIHT**TSCSV 371
Score = 82.6 bits (174), Expect(2) = 6e-032
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +2 / +3
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
+++ D G +++GC HY+RRC+I APCCN+VF CRHCHNEA S + R DV +
Sbjct: 168 LEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 335
Score = 76.2 bits (160), Expect(2) = 6e-032
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +1 / +2
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*+ +SV+ LW +G VLL* +Q +***Y + A+PL +W+M WWQG
Sbjct: 347 KGHLFTL*H*ARCSSSVY*LWRLHGEVLL*NLQAI***YLKTAIPL*WMWYM*NWWQG*F 526
Query: 484 LPLCEVWVLLFCYTP**PSVC 546
LPL +W+LLF Y S+C
Sbjct: 527 LPLL*MWLLLFDYVEGLSSLC 589
Score = 38.6 bits (78), Expect(2) = 8e-038
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E ASL Q Q T LQHGA I HLR *C P
Sbjct: 295 EFFASL*QCLQSKTSLQHGALIRHLRL*CEQP 200
>gb|DR089072.1|DR089072 RTAL1_6_H06.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_6_H06_A029 3', mRNA sequence
Length = 844
Score = 210 bits (452), Expect(2) = 2e-068
Identities = 72/131 (54%), Positives = 94/131 (71%)
Frame = +2 / +1
Query: 398 CKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPI 577
C F+DD+ K QYHC CGICR GGK+NFFHC KCG CYS+ L+D H CVE +M NCP+
Sbjct: 4 CNFFDDEDSKQQYHCDGCGICRTGGKDNFFHCYKCGCCYSIQLKDCHPCVEKAMHHNCPV 183
Query: 578 CYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEA 757
C+EYLFDS + VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+
Sbjct: 184 CFEYLFDSTKLISVLPCGHTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVAL 363
Query: 758 TIMPLVYRYKI 790
T MP Y+ K+
Sbjct: 364 TPMPEAYQNKM 396
Score = 111 bits (236), Expect = 2e-023
Identities = 58/124 (46%), Positives = 67/124 (54%)
Frame = -1 / -3
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ S S+ LEH GQ C+ IS K IV PQ TL+ ESN+
Sbjct: 374 GIGVKATSRSSFSHNLDISQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNK 195
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS 409
YS GQ I FST W S + E*Q PH QWKK SLPP L +P QWYC SSS
Sbjct: 194 YSKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSS 15
Query: 408 *NLH 397
LH
Sbjct: 14 KKLH 3
Score = 71.2 bits (149), Expect(2) = 2e-068
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+W+LCNDC SEVNFH++ HKC C SYNTR T
Sbjct: 397 VWILCNDCGVTSEVNFHIVAHKCQSCNSYNTRQT 498
>gb|CO167325.1|CO167325 FLD1_68_F03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_68_F03_A029 3', mRNA sequence
Length = 854
Score = 211 bits (455), Expect(2) = 6e-068
Identities = 76/122 (62%), Positives = 92/122 (75%)
Frame = +2 / +1
Query: 425 KGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSL 604
K QYHC DCGICRVGG++NFFHC KCG CY+V L+ H CVENSM NCP+C+EYLFDSL
Sbjct: 1 KQQYHCADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFEYLFDSL 180
Query: 605 QGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRY 784
+ VL CGHTMH C EM H++Y+CP+CSK+ D++ WE LDQEI AT MP Y+
Sbjct: 181 KAISVLRCGHTMHGECLTEMKKHSQYSCPMCSKSVCDMSIIWEQLDQEIAATPMPYDYQN 360
Query: 785 KI 790
K+
Sbjct: 361 KM 366
Score = 130 bits (279), Expect = 2e-029
Identities = 65/113 (57%), Positives = 71/113 (62%)
Frame = -1 / -1
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ VA+IS*S+ SQ S+ LEHIG Y C IS KH CIV PQ RT + ES R
Sbjct: 344 GIGVAAIS*SSCSQIMDISQTDLEHIGHEY*ECFFISVKHSPCIV*PQRRTDIAFKESKR 165
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYC 430
YS Q GQ IEFST W +T *Q PHF QWKK S PPTLHMPQS Q YC
Sbjct: 164 YSKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YC 6
Score = 68.0 bits (142), Expect(2) = 6e-068
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
+W+LCNDC+ SEV FH++ KC +C+SYNTR T P
Sbjct: 367 VWILCNDCDMFSEVQFHIVAQKCLNCKSYNTRQTRGP 477
>gb|CO162943.1|CO162943 FLD1_38_A12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_A12_A029 5', mRNA sequence
Length = 804
Score = 254 bits (549), Expect = 1e-066
Identities = 86/154 (55%), Positives = 113/154 (73%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 339 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 518
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 519 GICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 698
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWE 733
HT+H+ C +EM H ++ CP+CSK+ D++ WE
Sbjct: 699 HTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWE 800
Score = 136 bits (292), Expect(2) = 3e-039
Identities = 69/148 (46%), Positives = 76/148 (51%)
Frame = -1 / -3
Query: 714 SRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*W 535
S+ LEH GQ C+ IS K IV PQ TL+ ESN+YS GQ I FST W
Sbjct: 781 SQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNKYSKHTGQLWCIAFSTQGW 602
Query: 534 LSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLM 355
S + *Q PH QWKK SLPP L +P QWYC SSS LH SQKY PI TPQ+
Sbjct: 601 QSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSKKLHFSQKYFPIQTPQVT 422
Query: 354 HTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
C T C V R CLS
Sbjct: 421 QFC*TSCSVLQSEQITFRTSWRGTSCLS 338
Score = 90.9 bits (192), Expect(2) = 4e-031
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2 / +3
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 195 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 359
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / +2
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 371 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 550
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 551 LPLL*MWMLL 580
Score = 46.9 bits (96), Expect(2) = 3e-039
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / -3
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 325 SIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHP 224
>gb|DR117514.1|DR117514 RTMG1_7_A07.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_A07_A029 5', mRNA sequence
Length = 860
Score = 203 bits (437), Expect(2) = 5e-066
Identities = 68/129 (52%), Positives = 93/129 (72%)
Frame = +2 / +2
Query: 401 KFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPIC 580
+ +DDD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C
Sbjct: 5 QLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVC 184
Query: 581 YEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEAT 760
+E+LF+S + VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T
Sbjct: 185 FEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDEEVALT 364
Query: 761 IMPLVYRYK 787
MP Y+ K
Sbjct: 365 PMPESYQNK 391
Score = 111 bits (238), Expect = 9e-024
Identities = 58/123 (47%), Positives = 67/123 (54%)
Frame = -1 / -3
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +
Sbjct: 381 YDSGIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 202
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +
Sbjct: 201 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEI 22
Query: 417 SSS 409
SSS
Sbjct: 21 SSS 13
Score = 69.8 bits (146), Expect(2) = 5e-066
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / +2
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
KIW+LCNDCN SEV FH++ KC +C SYNTR T
Sbjct: 392 KIWILCNDCNATSEVPFHIVAQKCLNCNSYNTRQT 496
>gb|DN612750.1|DN612750 EST965800 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABJ58, mRNA sequence
Length = 605
Score = 192 bits (414), Expect(2) = 5e-066
Identities = 64/109 (58%), Positives = 85/109 (77%)
Frame = +2 / +1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + ++++V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CG
Sbjct: 265 RHDVP*HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCG 444
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDS 601
ICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E LF+S
Sbjct: 445 ICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFESLFES 591
Score = 111 bits (238), Expect(2) = 9e-029
Identities = 51/96 (53%), Positives = 60/96 (62%)
Frame = -1 / -1
Query: 615 LVPCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQW 436
L+ +SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QW
Sbjct: 605 LISLVDSNRDSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQW 426
Query: 435 YCPLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
YC +SSS +L +SQKY P+ TPQL+HT T C V
Sbjct: 425 YCCFEISSSNSLQVSQKYFPMQTPQLIHT**TSCSV 318
Score = 80.3 bits (169), Expect(2) = 5e-066
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +2 / +1
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDV 301
+++ D G +++GC HY+RRC+I APCCN+ F CRHCHNEA S + R DV
Sbjct: 115 LEKLDKGYLQYGCSHYKRRCRIRAPCCNEAFDCRHCHNEAKNSVNVKPQQRHDV 276
Score = 36.3 bits (73), Expect(2) = 9e-029
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -1 / -1
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E ASL Q Q LQHGA I HLR *C P
Sbjct: 242 EFFASL*QCLQSKASLQHGALIRHLRL*CEQP 147
>gb|DT628616.1|DT628616 EST1155186 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMD002 5' end, mRNA sequence
Length = 602
Score = 192 bits (414), Expect(2) = 5e-066
Identities = 64/109 (58%), Positives = 85/109 (77%)
Frame = +2 / -1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + ++++V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CG
Sbjct: 344 RHDVP*HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCG 165
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDS 601
ICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E LF+S
Sbjct: 164 ICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFESLFES 18
Score = 111 bits (238), Expect(2) = 9e-029
Identities = 51/96 (53%), Positives = 60/96 (62%)
Frame = -1 / +1
Query: 615 LVPCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQW 436
L+ +SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QW
Sbjct: 4 LISLVDSNRDSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQW 183
Query: 435 YCPLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
YC +SSS +L +SQKY P+ TPQL+HT T C V
Sbjct: 184 YCCFEISSSNSLQVSQKYFPMQTPQLIHT**TSCSV 291
Score = 80.3 bits (169), Expect(2) = 5e-066
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +2 / -1
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDV 301
+++ D G +++GC HY+RRC+I APCCN+ F CRHCHNEA S + R DV
Sbjct: 494 LEKLDKGYLQYGCSHYKRRCRIRAPCCNEAFDCRHCHNEAKNSVNVKPQQRHDV 333
Score = 36.3 bits (73), Expect(2) = 9e-029
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -1 / +1
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E ASL Q Q LQHGA I HLR *C P
Sbjct: 367 EFFASL*QCLQSKASLQHGALIRHLRL*CEQP 462
>gb|CX714248.1|CX714248 RTPQ1_19_F08.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_19_F08_A032 5', mRNA sequence
Length = 693
Score = 248 bits (537), Expect = 5e-065
Identities = 84/150 (56%), Positives = 111/150 (74%)
Frame = +2 / +2
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 239 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 418
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 419 GICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 598
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLT 721
HT+H+ C +EM H ++ CP+CSK+ D++
Sbjct: 599 HTIHMHCLKEMHEHLQFACPVCSKSVCDMS 688
Score = 136 bits (292), Expect(2) = 3e-039
Identities = 69/148 (46%), Positives = 76/148 (51%)
Frame = -1 / -1
Query: 714 SRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*W 535
S+ LEH GQ C+ IS K IV PQ TL+ ESN+YS GQ I FST W
Sbjct: 681 SQTDLEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNKYSKHTGQLWCIAFSTQGW 502
Query: 534 LSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLM 355
S + *Q PH QWKK SLPP L +P QWYC SSS LH SQKY PI TPQ+
Sbjct: 501 QSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSKKLHFSQKYFPIQTPQVT 322
Query: 354 HTCDTGCFVXXXXXXXXXXXXRHIVCLS 271
C T C V R CLS
Sbjct: 321 QFC*TSCSVLQSEQITFRTSWRGTSCLS 238
Score = 90.9 bits (192), Expect(2) = 4e-031
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2 / +2
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 95 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 259
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / +1
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 271 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 450
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 451 LPLL*MWMLL 480
Score = 46.9 bits (96), Expect(2) = 3e-039
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 225 SIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHP 124
>gb|CO164083.1|CO164083 FLD1_45_E07.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_E07_A029 5', mRNA sequence
Length = 886
Score = 194 bits (418), Expect(2) = 8e-064
Identities = 67/122 (54%), Positives = 88/122 (72%)
Frame = +2 / -3
Query: 425 KGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSL 604
K QYHC CGICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS
Sbjct: 884 KQQYHCDGCGICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDST 705
Query: 605 QGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRY 784
+ VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+
Sbjct: 704 KLISVLPCGHTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMPEAYQN 525
Query: 785 KI 790
K+
Sbjct: 524 KM 519
Score = 71.2 bits (149), Expect(2) = 8e-064
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / -3
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+W+LCNDC SEVNFH++ HKC C SYNTR T
Sbjct: 518 VWILCNDCGVTSEVNFHIVAHKCQSCNSYNTRQT 417
>gb|CO162866.1|CO162866 FLD1_38_A12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_A12_A029 3', mRNA sequence
Length = 843
Score = 194 bits (418), Expect(2) = 8e-064
Identities = 67/122 (54%), Positives = 88/122 (72%)
Frame = +2 / +2
Query: 425 KGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSL 604
K QYHC CGICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS
Sbjct: 2 KQQYHCDGCGICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDST 181
Query: 605 QGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRY 784
+ VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+
Sbjct: 182 KLISVLPCGHTIHMHCLKEMHEHLQFACPVCSKSVCDMSKLWEKLDREVALTPMPEAYQN 361
Query: 785 KI 790
K+
Sbjct: 362 KM 367
Score = 71.2 bits (149), Expect(2) = 8e-064
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / +2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+W+LCNDC SEVNFH++ HKC C SYNTR T
Sbjct: 368 VWILCNDCGVTSEVNFHIVAHKCQSCNSYNTRQT 469
>gb|DR691682.1|DR691682 EST1081769 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADB54 3' end, mRNA sequence
Length = 582
Score = 244 bits (528), Expect = 9e-064
Identities = 83/144 (57%), Positives = 107/144 (74%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 151 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 330
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 331 GICRTGGKDNFFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 510
Query: 632 HTMHLTCFEEMVAHNKYTCPICSK 703
HT+H+ C +EM H ++ CP+CSK
Sbjct: 511 HTIHMHCLKEMHEHLQFACPVCSK 582
Score = 135 bits (290), Expect(2) = 6e-038
Identities = 68/144 (47%), Positives = 74/144 (51%)
Frame = -1 / -2
Query: 702 LEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRS 523
LEH GQ C+ IS K IV PQ TL+ ESN+YS GQ I FST W S +
Sbjct: 581 LEHTGQAN*RCSCISFKQCM*IV*PQGNTLISFVESNKYSKHTGQLWCIAFSTQGWQSFN 402
Query: 522 ITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCD 343
*Q PH QWKK SLPP L +P QWYC SSS LH SQKY PI TPQ+ C
Sbjct: 401 WIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSKKLHFSQKYFPIQTPQVTQFC* 222
Query: 342 TGCFVXXXXXXXXXXXXRHIVCLS 271
T C V R CLS
Sbjct: 221 TSCSVLQSEQITFRTSWRGTSCLS 150
Score = 88.6 bits (187), Expect(2) = 2e-030
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HY RRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 7 DTLNQGCMQYGCSHYHRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 171
Score = 65.2 bits (136), Expect(2) = 2e-030
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / +3
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 183 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 362
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 363 LPLL*MWMLL 392
Score = 43.2 bits (88), Expect(2) = 6e-038
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -1 / -2
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLR *C HP
Sbjct: 137 SIEFLASL*QCLQSKTSLQHGALIWHLRW*CEHP 36
>gb|CF672296.1|CF672296 RTCNT1_62_D06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_D06_A029 5', mRNA sequence
Length = 765
Score = 193 bits (416), Expect(2) = 4e-063
Identities = 65/121 (53%), Positives = 88/121 (72%)
Frame = +2 / +1
Query: 425 KGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSL 604
K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S
Sbjct: 1 KQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFEST 180
Query: 605 QGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRY 784
+ VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+
Sbjct: 181 RDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDEEVALTPMPESYQN 360
Query: 785 K 787
K
Sbjct: 361 K 363
Score = 104 bits (221), Expect = 2e-021
Identities = 54/113 (47%), Positives = 62/113 (54%)
Frame = -1 / -2
Query: 768 GMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNR 589
G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +SNR
Sbjct: 344 GIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVDSNR 165
Query: 588 YS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYC 430
S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC
Sbjct: 164 NSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYC 6
Score = 69.8 bits (146), Expect(2) = 4e-063
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
KIW+LCNDCN SEV FH++ KC +C SYNTR T
Sbjct: 364 KIWILCNDCNATSEVPFHIVAQKCLNCNSYNTRQT 468
>gb|DN611005.1|DN611005 EST964055 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAW63, mRNA sequence
Length = 472
Score = 216 bits (466), Expect(2) = 3e-060
Identities = 72/134 (53%), Positives = 97/134 (72%)
Frame = +2 / +3
Query: 386 FCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQ 565
FC+ CK +DDD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 3 FCETCKLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHH 182
Query: 566 NCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQ 745
NCP+C+E+LF+S + VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+
Sbjct: 183 NCPVCFEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDE 362
Query: 746 EIEATIMPLVYRYK 787
E+ T MP Y+ K
Sbjct: 363 EVALTPMPESYQNK 404
Score = 120 bits (256), Expect = 3e-026
Identities = 62/131 (47%), Positives = 73/131 (55%)
Frame = -1 / -1
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +
Sbjct: 394 YDSGIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 215
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +
Sbjct: 214 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEI 35
Query: 417 SSS*NLHISQK 385
SSS +L +SQK
Sbjct: 34 SSSNSLQVSQK 2
Score = 37.3 bits (75), Expect(2) = 3e-060
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 785 KIWVLCNDCNKVSEV 829
KIW+LCNDCN SEV
Sbjct: 405 KIWILCNDCNATSEV 449
>gb|CX652526.1|CX652526 COLD1_59_E01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_E01_A029 5', mRNA sequence
Length = 741
Score = 182 bits (393), Expect(2) = 6e-060
Identities = 61/116 (52%), Positives = 84/116 (72%)
Frame = +2 / +2
Query: 440 CIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRV 619
C CGICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + V
Sbjct: 2 CDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINV 181
Query: 620 LNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
L CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K
Sbjct: 182 LPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDEEVALTPMPESYQNK 349
Score = 69.8 bits (146), Expect(2) = 6e-060
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / +2
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
KIW+LCNDCN SEV FH++ KC +C SYNTR T
Sbjct: 350 KIWILCNDCNATSEVPFHIVAQKCLNCNSYNTRQT 454
>gb|DR745125.1|DR745125 RTCU1_27_E06.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_27_E06_A029 3', mRNA sequence
Length = 707
Score = 182 bits (393), Expect(2) = 6e-060
Identities = 61/116 (52%), Positives = 84/116 (72%)
Frame = +2 / -2
Query: 440 CIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRV 619
C CGICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + V
Sbjct: 703 CDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINV 524
Query: 620 LNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
L CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+E+ T MP Y+ K
Sbjct: 523 LPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDEEVALTPMPESYQNK 356
Score = 69.8 bits (146), Expect(2) = 6e-060
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2 / -2
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
KIW+LCNDCN SEV FH++ KC +C SYNTR T
Sbjct: 355 KIWILCNDCNATSEVPFHIVAQKCLNCNSYNTRQT 251
>gb|DN612719.1|DN612719 EST965769 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABJ25, mRNA sequence
Length = 448
Score = 216 bits (466), Expect(2) = 1e-059
Identities = 72/134 (53%), Positives = 97/134 (72%)
Frame = +2 / -3
Query: 386 FCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQ 565
FC+ CK +DDD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 446 FCETCKLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHH 267
Query: 566 NCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQ 745
NCP+C+E+LF+S + VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+
Sbjct: 266 NCPVCFEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDE 87
Query: 746 EIEATIMPLVYRYK 787
E+ T MP Y+ K
Sbjct: 86 EVALTPMPESYQNK 45
Score = 120 bits (256), Expect = 3e-026
Identities = 62/131 (47%), Positives = 73/131 (55%)
Frame = -1 / +1
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +
Sbjct: 55 YDSGIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 234
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +
Sbjct: 235 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEI 414
Query: 417 SSS*NLHISQK 385
SSS +L +SQK
Sbjct: 415 SSSNSLQVSQK 447
Score = 35.4 bits (71), Expect(2) = 1e-059
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 785 KIWVLCNDCNKVSE 826
KIW+LCNDCN SE
Sbjct: 44 KIWILCNDCNATSE 3
>gb|DT628106.1|DT628106 EST1156855 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMCU32 5' end, mRNA sequence
Length = 448
Score = 216 bits (466), Expect(2) = 1e-059
Identities = 72/134 (53%), Positives = 97/134 (72%)
Frame = +2 / -3
Query: 386 FCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQ 565
FC+ CK +DDD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 446 FCETCKLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHH 267
Query: 566 NCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQ 745
NCP+C+E+LF+S + VL CGHT+H+ C +EM H ++ CP+CSK+ D++ WE LD+
Sbjct: 266 NCPVCFEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDMSKVWEKLDE 87
Query: 746 EIEATIMPLVYRYK 787
E+ T MP Y+ K
Sbjct: 86 EVALTPMPESYQNK 45
Score = 120 bits (256), Expect = 3e-026
Identities = 62/131 (47%), Positives = 73/131 (55%)
Frame = -1 / +1
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ EH GQ C IS K IVCPQ TL+ +
Sbjct: 55 YDSGIGVKATSSSSFSQTFDISQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 234
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC +
Sbjct: 235 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEI 414
Query: 417 SSS*NLHISQK 385
SSS +L +SQK
Sbjct: 415 SSSNSLQVSQK 447
Score = 35.4 bits (71), Expect(2) = 1e-059
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 785 KIWVLCNDCNKVSE 826
KIW+LCNDCN SE
Sbjct: 44 KIWILCNDCNATSE 3
>gb|CV032506.1|CV032506 RTNACL1_8_D03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_D03_A029 5', mRNA sequence
Length = 388
Score = 223 bits (481), Expect = 3e-057
Identities = 74/128 (57%), Positives = 98/128 (76%)
Frame = +2 / +3
Query: 305 KVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCGICRVGGKENF 484
+V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CGICR GG++NF
Sbjct: 3 RVICSLCDTEQDVFQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGGRDNF 182
Query: 485 FHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEM 664
FHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + VL CGHT+H+ C +EM
Sbjct: 183 FHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINVLPCGHTIHMDCLKEM 362
Query: 665 VAHNKYTC 688
H ++ C
Sbjct: 363 QQHLQFFC 386
Score = 133 bits (286), Expect = 2e-030
Identities = 63/121 (52%), Positives = 72/121 (59%)
Frame = -1 / -1
Query: 690 GQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRSITE* 511
GQ C IS K IVCPQ TL+ +SNR S Q GQ I ST S +I E*
Sbjct: 388 GQKNCRCCCISFKQSI*IVCPQGSTLISLVDSNRNSKQTGQLWCIAPSTQG*QSFNIIE* 209
Query: 510 QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTGCF 331
Q PH QWKK SLPP LH+P QWYC +SSS +L +SQKY P+ TPQL+HT T C
Sbjct: 208 QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSNSLQVSQKYFPMQTPQLIHT*KTSCS 29
Query: 330 V 328
V
Sbjct: 28 V 26
>gb|DN612927.1|DN612927 EST965977 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABL91, mRNA sequence
Length = 448
Score = 210 bits (453), Expect(2) = 3e-057
Identities = 71/134 (52%), Positives = 95/134 (70%)
Frame = +2 / -3
Query: 386 FCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQ 565
FC+ CK +DD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 446 FCETCKLFDDGISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHH 267
Query: 566 NCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQ 745
NCP+C+E+LF+S + VL CGHT+H+ C +EM H ++ CP+CSK+ DL+ WE LD+
Sbjct: 266 NCPVCFEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVCSKSVCDLSKVWEKLDE 87
Query: 746 EIEATIMPLVYRYK 787
E+ T M Y+ K
Sbjct: 86 EVALTPMAESYQNK 45
Score = 116 bits (248), Expect = 4e-025
Identities = 59/125 (47%), Positives = 70/125 (56%)
Frame = -1 / +1
Query: 759 VASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS* 580
V + S S+ SQ +S+ EH GQ C IS K IVCPQ TL+ +SNR S
Sbjct: 73 VKATSSSSFSQTFDRSQTDFEHTGQKNCRCCCISFKQSI*IVCPQGSTLISLVDSNRNSK 252
Query: 579 QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NL 400
Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC + SS +L
Sbjct: 253 QTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEIPSSNSL 432
Query: 399 HISQK 385
+SQK
Sbjct: 433 QVSQK 447
Score = 33.1 bits (66), Expect(2) = 3e-057
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 785 KIWVLCNDCNKVSE 826
K W+LCNDCN SE
Sbjct: 44 KTWILCNDCNATSE 3
>gb|CO362646.1|CO362646 RTK1_5_A12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_5_A12_A029 3', mRNA sequence
Length = 809
Score = 222 bits (479), Expect = 5e-057
Identities = 73/126 (57%), Positives = 98/126 (77%)
Frame = +2 / -2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R ++++V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CG
Sbjct: 379 RHDVPRHNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCG 200
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + VL CGH
Sbjct: 199 ICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINVLPCGH 20
Query: 635 TMHLTC 652
T+H+ C
Sbjct: 19 TIHMDC 2
Score = 126 bits (269), Expect(2) = 1e-033
Identities = 57/104 (54%), Positives = 66/104 (63%)
Frame = -1 / +3
Query: 639 IVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTL 460
IVCPQ TL+ +SNR S Q GQ I ST S +I E*Q PH QWKK SLPP L
Sbjct: 15 IVCPQGSTLISLVDSNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVL 194
Query: 459 HMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
H+P QWYC +SSS +L +SQKY P+ TPQL+HT T C V
Sbjct: 195 HIPHPSQWYCCFEISSSNSLQVSQKYFPMQTPQLIHT**TSCSV 326
Score = 82.6 bits (174), Expect(2) = 6e-032
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +2 / -2
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
+++ D G +++GC HY+RRC+I APCCN+VF CRHCHNEA S + R DV +
Sbjct: 529 LEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 362
Score = 76.2 bits (160), Expect(2) = 6e-032
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +1 / -1
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*+ +SV+ LW +G VLL* +Q +***Y + A+PL +W+M WWQG
Sbjct: 350 KGHLFTL*H*ARCSSSVY*LWRLHGEVLL*NLQAI***YLKTAIPL*WMWYM*NWWQG*F 171
Query: 484 LPLCEVWVLLFCYTP**PSVC 546
LPL +W+LLF Y S+C
Sbjct: 170 LPLL*MWLLLFDYVEGLSSLC 108
Score = 38.6 bits (78), Expect(2) = 1e-033
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / +3
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E ASL Q Q T LQHGA I HLR *C P
Sbjct: 402 EFFASL*QCLQSKTSLQHGALIRHLRL*CEQP 497
>gb|DR117521.1|DR117521 RTMG1_7_B02.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_B02_A029 5', mRNA sequence
Length = 783
Score = 222 bits (479), Expect = 5e-057
Identities = 73/126 (57%), Positives = 98/126 (77%)
Frame = +2 / +3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R ++++V+C LC+T+Q V QVCI+CGV MG+YFC+ CK +DDD K QYHC CG
Sbjct: 405 RHDVPRHNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCG 584
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG++NFFHC KCG CYS++L+D H CVE +M NCP+C+E+LF+S + VL CGH
Sbjct: 585 ICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFEFLFESTRDINVLPCGH 764
Query: 635 TMHLTC 652
T+H+ C
Sbjct: 765 TIHMDC 782
Score = 126 bits (269), Expect(2) = 1e-033
Identities = 57/104 (54%), Positives = 66/104 (63%)
Frame = -1 / -3
Query: 639 IVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTL 460
IVCPQ TL+ +SNR S Q GQ I ST S +I E*Q PH QWKK SLPP L
Sbjct: 769 IVCPQGSTLISLVDSNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVL 590
Query: 459 HMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
H+P QWYC +SSS +L +SQKY P+ TPQL+HT T C V
Sbjct: 589 HIPHPSQWYCCFEISSSNSLQVSQKYFPMQTPQLIHT**TSCSV 458
Score = 82.6 bits (174), Expect(2) = 6e-032
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +2 / +3
Query: 140 VDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
+++ D G +++GC HY+RRC+I APCCN+VF CRHCHNEA S + R DV +
Sbjct: 255 LEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 422
Score = 76.2 bits (160), Expect(2) = 6e-032
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +1 / +2
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*+ +SV+ LW +G VLL* +Q +***Y + A+PL +W+M WWQG
Sbjct: 434 KGHLFTL*H*ARCSSSVY*LWRLHGEVLL*NLQAI***YLKTAIPL*WMWYM*NWWQG*F 613
Query: 484 LPLCEVWVLLFCYTP**PSVC 546
LPL +W+LLF Y S+C
Sbjct: 614 LPLL*MWLLLFDYVEGLSSLC 676
Score = 38.6 bits (78), Expect(2) = 1e-033
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -3
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E ASL Q Q T LQHGA I HLR *C P
Sbjct: 382 EFFASL*QCLQSKTSLQHGALIRHLRL*CEQP 287
>gb|DN614765.1|DN614765 EST967815 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAC788, mRNA sequence
Length = 448
Score = 206 bits (445), Expect(2) = 8e-057
Identities = 70/134 (52%), Positives = 95/134 (70%)
Frame = +2 / +3
Query: 386 FCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQ 565
FC+ CK +DDD K YHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 3 FCETCKLFDDDISKQ*YHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHH 182
Query: 566 NCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQ 745
NCP+C+E+LF+S + VL CGHT+H+ C +EM H ++ CP+ SK+ D++ WE LD+
Sbjct: 183 NCPVCFEFLFESTRDINVLPCGHTIHMDCLKEMQQHLQFFCPVRSKSVCDMSKVWEKLDE 362
Query: 746 EIEATIMPLVYRYK 787
E+ T MP Y+ K
Sbjct: 363 EVALTPMPESYQNK 404
Score = 111 bits (237), Expect = 1e-023
Identities = 60/131 (45%), Positives = 71/131 (54%)
Frame = -1 / -1
Query: 777 YTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNE 598
Y G+ V + S S+ SQ S+ E GQ C IS K IVCPQ TL+ +
Sbjct: 394 YDSGIGVKATSSSSFSQTFDISQTDFERTGQKNCRCCCISFKQSI*IVCPQGSTLISLVD 215
Query: 597 SNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSV 418
SNR S Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWY +
Sbjct: 214 SNRNSKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYYCFEI 35
Query: 417 SSS*NLHISQK 385
SSS +L +SQK
Sbjct: 34 SSSNSLQVSQK 2
Score = 35.4 bits (71), Expect(2) = 8e-057
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 785 KIWVLCNDCNKVSE 826
KIW+LCNDCN SE
Sbjct: 405 KIWILCNDCNATSE 446
>gb|CF390389.1|CF390389 RTDR2_19_E10.b1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_19_E10_A021 3', mRNA
sequence
Length = 667
Score = 220 bits (475), Expect = 2e-056
Identities = 75/127 (59%), Positives = 95/127 (74%)
Frame = +2 / -3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 386 DRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 207
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GGK+NFFHC KCG CY++ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 206 GICRTGGKDNFFHCYKCGCCYAIELKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 27
Query: 632 HTMHLTC 652
HT+H+ C
Sbjct: 26 HTIHMHC 6
Score = 121 bits (258), Expect(2) = 1e-034
Identities = 59/123 (47%), Positives = 64/123 (52%)
Frame = -1 / +1
Query: 639 IVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTL 460
IV PQ TL+ ESN+YS GQ I FST W S + *Q PH QWKK SLPP L
Sbjct: 19 IV*PQGNTLISXVESNKYSKHTGQLWCIAFSTQGWQSFNSIA*QHPHL*QWKKLSLPPVL 198
Query: 459 HMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIV 280
+P QWYC SSS LH SQKY PI TPQ+ C T C V R
Sbjct: 199 QIPHPSQWYCCFESSSSKKLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTS 378
Query: 279 CLS 271
CLS
Sbjct: 379 CLS 387
Score = 90.9 bits (192), Expect(2) = 4e-031
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +2 / -3
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
D + G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 530 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 366
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1 / -2
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T + LW YG+VLL* MQ L** + A+PL R+W++Q W Q
Sbjct: 354 KGYLFTL*N*TRCSAKLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*RMWNLQNWRQR*F 175
Query: 484 LPLCEVWVLL 513
LPL +W+LL
Sbjct: 174 LPLL*MWMLL 145
Score = 46.9 bits (96), Expect(2) = 1e-034
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / +1
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 400 SIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHP 501
>gb|DN612064.1|DN612064 EST965114 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABA36, mRNA sequence
Length = 445
Score = 207 bits (447), Expect(2) = 2e-056
Identities = 69/134 (51%), Positives = 95/134 (70%)
Frame = +2 / +3
Query: 386 FCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQ 565
FC+ CK +DD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 3 FCETCKLFDDGISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHH 182
Query: 566 NCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQ 745
NCP+C+E+LF+S + VL CGHT+H+ C +E+ H ++ CP+CSK+ D++ WE LD+
Sbjct: 183 NCPVCFEFLFESTRDINVLPCGHTIHMDCLKEVQQHLQFFCPVCSKSVCDMSKVWEKLDE 362
Query: 746 EIEATIMPLVYRYK 787
E+ T M Y+ K
Sbjct: 363 EVALTPMAESYQNK 404
Score = 111 bits (238), Expect = 9e-024
Identities = 58/125 (46%), Positives = 68/125 (54%)
Frame = -1 / -1
Query: 759 VASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS* 580
V + S S+ SQ S+ EH GQ C S K IVCPQ TL+ +SNR S
Sbjct: 376 VKATSSSSFSQTFDISQTDFEHTGQKNCRCCCTSFKQSI*IVCPQGSTLISLVDSNRNSK 197
Query: 579 QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NL 400
Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC + SS +L
Sbjct: 196 QTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEIPSSNSL 17
Query: 399 HISQK 385
+SQK
Sbjct: 16 QVSQK 2
Score = 33.1 bits (66), Expect(2) = 2e-056
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 785 KIWVLCNDCNKVS 823
KIW+LCNDCN S
Sbjct: 405 KIWILCNDCNATS 443
>gb|DN611996.1|DN611996 EST965046 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB939, mRNA sequence
Length = 441
Score = 207 bits (447), Expect(2) = 5e-056
Identities = 69/134 (51%), Positives = 95/134 (70%)
Frame = +2 / +3
Query: 386 FCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQ 565
FC+ CK +DD K QYHC CGICR GG++NFFHC KCG CYS++L+D H CVE +M
Sbjct: 3 FCETCKLFDDGISKQQYHCDGCGICRTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHH 182
Query: 566 NCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQ 745
NCP+C+E+LF+S + VL CGHT+H+ C +E+ H ++ CP+CSK+ D++ WE LD+
Sbjct: 183 NCPVCFEFLFESTRDINVLPCGHTIHMDCLKEVQQHLQFFCPVCSKSVCDMSKVWEKLDE 362
Query: 746 EIEATIMPLVYRYK 787
E+ T M Y+ K
Sbjct: 363 EVALTPMAESYQNK 404
Score = 111 bits (238), Expect = 9e-024
Identities = 58/125 (46%), Positives = 68/125 (54%)
Frame = -1 / -3
Query: 759 VASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS* 580
V + S S+ SQ S+ EH GQ C S K IVCPQ TL+ +SNR S
Sbjct: 376 VKATSSSSFSQTFDISQTDFEHTGQKNCRCCCTSFKQSI*IVCPQGSTLISLVDSNRNSK 197
Query: 579 QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NL 400
Q GQ I ST S +I E*Q PH QWKK SLPP LH+P QWYC + SS +L
Sbjct: 196 QTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEIPSSNSL 17
Query: 399 HISQK 385
+SQK
Sbjct: 16 QVSQK 2
Score = 31.8 bits (63), Expect(2) = 5e-056
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 785 KIWVLCNDCN 814
KIW+LCNDCN
Sbjct: 405 KIWILCNDCN 434
>gb|BX251301.1|BX251301 BX251301 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP047H07, mRNA sequence
Length = 675
Score = 217 bits (469), Expect = 1e-055
Identities = 74/125 (59%), Positives = 93/125 (74%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + R +V KV+C LC T+Q V Q C++CGV MG+YFC+ C F+DD+ K QYHC C
Sbjct: 298 DRHDVPRHEVRKVICSLCRTEQDVQQTCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGC 477
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICR GG +NFFHC KCG CYS+ L+D H CVE +M NCP+C+EYLFDS + VL CG
Sbjct: 478 GICRTGGNDNFFHCYKCGCCYSIQLKDCHPCVEKAMHHNCPVCFEYLFDSTKLISVLPCG 657
Query: 632 HTMHL 646
HT+H+
Sbjct: 658 HTIHM 672
Score = 125 bits (267), Expect(2) = 1e-035
Identities = 60/123 (48%), Positives = 65/123 (52%)
Frame = -1 / -2
Query: 639 IVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTL 460
IV PQ TL+ ESN+YS GQ I FST W S + E*Q PH QWKK SLPP L
Sbjct: 665 IV*PQGNTLISFVESNKYSKHTGQLWCIAFSTQGWQSFNCIE*QHPHL*QWKKLSLPPVL 486
Query: 459 HMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFVXXXXXXXXXXXXRHIV 280
+P QWYC SSS LH SQKY PI TPQ+ C T C V R
Sbjct: 485 QIPHPSQWYCCFESSSSKKLHFSQKYFPIQTPQVTQVC*TSCSVLQSEQITFRTSWRGTS 306
Query: 279 CLS 271
CLS
Sbjct: 305 CLS 297
Score = 90.0 bits (190), Expect(2) = 5e-033
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2 / +1
Query: 158 GKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATASGDRHTICRQDVEK 307
G M++GC HYRRRC+I APCCN+VF CRHCHNEA S D H + R DV +
Sbjct: 169 GCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPR 318
Score = 72.5 bits (152), Expect(2) = 5e-033
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = +1 / +3
Query: 304 KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLHRLWHMQGWWQGKL 483
K L TL*N T ++ LW YG+VLL* MQ L** + A+PL +W++Q WWQ
Sbjct: 330 KGYLFTL*N*TRCSANLRYLWCLYGKVLL*KMQFL**RGLKTAIPL*WMWNLQNWWQR*F 509
Query: 484 LPLCEVWVLLFCYTP**PSVCG 549
LPL +W+LL P +CG
Sbjct: 510 LPLL*MWMLLLYTVEGLPPLCG 575
Score = 46.0 bits (94), Expect(2) = 1e-035
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 273 SPEAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
S E +ASL Q Q T LQHGA I HLRR*C HP
Sbjct: 284 SIEFLASL*QCLQSKTSLQHGALI*HLRR*CEHP 183
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 843,481,033
Number of Sequences: 355925
Number of extensions: 14187604
Number of successful extensions: 74138
Number of sequences better than 1.0e-020: 122
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 22559257080
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)