TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440716.2.1
(774 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO169484.1|CO169484 NDL1_7_H09.b1_A029 Needles control P... 122 3e-027
gb|DR024314.1|DR024314 STRS1_64_C03.b1_A034 Shoot tip pitch... 121 6e-027
gb|BX255181.1|BX255181 BX255181 Pinus pinaster differenciat... 120 1e-026
gb|DR060675.1|DR060675 RTNIT1_29_G03.b1_A029 Roots minus ni... 120 1e-026
gb|DR743959.1|DR743959 RTCU1_19_G01.b1_A029 Roots plus adde... 120 1e-026
gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus adde... 120 1e-026
gb|BX255284.1|BX255284 BX255284 Pinus pinaster differenciat... 118 5e-026
gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciat... 117 1e-025
gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magn... 117 1e-025
gb|BE187204.1|BE187204 NXNV_160_E12_F Nsf Xylem Normal wood... 116 1e-025
gb|DR116517.1|DR116517 RTMG1_1_A03.b1_A029 Roots minus magn... 116 1e-025
dbj|BD224494.1| Materials and methods for the modification ... 116 1e-025
gb|CF470501.1|CF470501 RTDS1_17_D08.g1_A015 Drought-stresse... 116 2e-025
gb|CO364236.1|CO364236 RTK1_14_B09.g1_A029 Roots minus pota... 116 2e-025
gb|BE187215.1|BE187215 NXNV_160_F11_F Nsf Xylem Normal wood... 116 3e-025
gb|CF397284.1|CF397284 RTDS3_2_C09.g1_A022 Drought-stressed... 116 3e-025
gb|CF397459.1|CF397459 RTDS3_3_C06.g1_A022 Drought-stressed... 115 3e-025
gb|DR094542.1|DR094542 STRR1_15_F01.b1_A033 Stem Response R... 104 4e-025
gb|CF470473.1|CF470473 RTDS1_17_C10.g1_A015 Drought-stresse... 114 7e-025
gb|CF470929.1|CF470929 RTDS1_15_D01.g1_A015 Drought-stresse... 114 7e-025
gb|BE644117.1|BE644117 NXCI_054_F12_F NXCI (Nsf Xylem Compr... 113 1e-024
gb|CF390898.1|CF390898 RTDR3_2_B12.g1_A022 Loblolly pine ro... 113 1e-024
gb|CO161081.1|CO161081 FLD1_26_C01.g1_A029 Root flooded Pin... 100 2e-024
gb|DR015919.1|DR015919 STRS1_6_B08.g1_A034 Shoot tip pitch ... 100 2e-024
gb|CO161007.1|CO161007 FLD1_26_C01.b1_A029 Root flooded Pin... 100 2e-024
gb|CO158429.1|CO158429 FLD1_6_G10.g1_A029 Root flooded Pinu... 112 3e-024
gb|CO159223.1|CO159223 FLD1_12_F05.b1_A029 Root flooded Pin... 112 3e-024
gb|CO160872.1|CO160872 FLD1_25_E02.b1_A029 Root flooded Pin... 112 3e-024
gb|CO161871.1|CO161871 FLD1_31_E09.g1_A029 Root flooded Pin... 112 3e-024
gb|CO164784.1|CO164784 FLD1_50_G01.b1_A029 Root flooded Pin... 112 3e-024
gb|CO165060.1|CO165060 FLD1_52_C08.b1_A029 Root flooded Pin... 112 3e-024
gb|CO165133.1|CO165133 FLD1_52_C08.g1_A029 Root flooded Pin... 112 3e-024
gb|CO369423.1|CO369423 RTK1_47_B12.b1_A029 Roots minus pota... 112 3e-024
gb|DR017118.1|DR017118 STRS1_14_E02.b1_A034 Shoot tip pitch... 112 3e-024
gb|DR020338.1|DR020338 STRS1_36_F03.b1_A034 Shoot tip pitch... 112 3e-024
gb|DR023083.1|DR023083 STRS1_55_H08.b1_A034 Shoot tip pitch... 112 3e-024
gb|DR093166.1|DR093166 STRR1_6_B04.g1_A033 Stem Response Re... 112 3e-024
gb|DR099649.1|DR099649 STRR1_57_D02.b1_A033 Stem Response R... 112 3e-024
gb|DR101174.1|DR101174 STRR1_71_C05.b1_A033 Stem Response R... 112 3e-024
gb|DR101844.1|DR101844 STRR1_76_F02.b1_A033 Stem Response R... 112 3e-024
gb|DR385544.1|DR385544 RTHG1_9_G06.b1_A029 Roots plus added... 112 3e-024
gb|DR385625.1|DR385625 RTHG1_9_G06.g1_A029 Roots plus added... 112 3e-024
gb|DR112323.1|DR112323 RTS1_27_H07.b1_A029 Roots minus sulf... 111 4e-024
gb|DR020433.1|DR020433 STRS1_37_A03.b1_A034 Shoot tip pitch... 99 5e-024
gb|DR020500.1|DR020500 STRS1_37_A03.g1_A034 Shoot tip pitch... 99 5e-024
gb|CF402964.1|CF402964 RTWW1_24_E04.b1_A015 Well-watered lo... 111 6e-024
gb|CF403057.1|CF403057 RTWW1_24_E04.g1_A015 Well-watered lo... 111 6e-024
gb|BX676981.1|BX676981 BX676981 RN Pinus pinaster cDNA clon... 111 6e-024
gb|DR068520.1|DR068520 RTDK1_1_G05.b1_A029 Roots, dark Pinu... 111 6e-024
gb|DR068609.1|DR068609 RTDK1_1_G05.g1_A029 Roots, dark Pinu... 111 6e-024
gb|DR068907.1|DR068907 RTDK1_3_C12.g1_A029 Roots, dark Pinu... 111 6e-024
gb|DR094210.1|DR094210 STRR1_13_D08.b1_A033 Stem Response R... 111 6e-024
gb|DR054231.1|DR054231 RTCA1_16_B10.b1_A029 Roots minus cal... 110 1e-023
gb|CO157922.1|CO157922 FLD1_3_C10.b1_A029 Root flooded Pinu... 110 2e-023
gb|CO364666.1|CO364666 RTK1_21_C04.b1_A029 Roots minus pota... 110 2e-023
gb|CO364746.1|CO364746 RTK1_21_C04.g1_A029 Roots minus pota... 110 2e-023
gb|DR095898.1|DR095898 STRR1_24_H10.b1_A033 Stem Response R... 110 2e-023
gb|DR101216.1|DR101216 STRR1_71_G05.b1_A033 Stem Response R... 109 2e-023
gb|CF476517.1|CF476517 RTWW3_1_H01.g1_A022 Well-watered lob... 109 3e-023
gb|CO159794.1|CO159794 FLD1_16_A12.b1_A029 Root flooded Pin... 109 3e-023
gb|DR024852.1|DR024852 STRS1_68_A06.b1_A034 Shoot tip pitch... 109 3e-023
gb|DR018562.1|DR018562 STRS1_24_A10.b1_A034 Shoot tip pitch... 100 3e-023
gb|DR101555.1|DR101555 STRR1_74_D08.b1_A033 Stem Response R... 108 4e-023
gb|DR101682.1|DR101682 STRR1_75_C03.b1_A033 Stem Response R... 108 4e-023
gb|CF390867.1|CF390867 RTDR3_2_B12.b1_A022 Loblolly pine ro... 108 6e-023
gb|DR023822.1|DR023822 STRS1_60_F11.b1_A034 Shoot tip pitch... 108 6e-023
gb|DR024523.1|DR024523 STRS1_65_C06.g1_A034 Shoot tip pitch... 108 6e-023
gb|DR110554.1|DR110554 RTS1_11_C05.g1_A029 Roots minus sulf... 108 6e-023
gb|DR385195.1|DR385195 RTHG1_7_E09.b1_A029 Roots plus added... 108 6e-023
gb|DR018619.1|DR018619 STRS1_24_A10.g1_A034 Shoot tip pitch... 99 6e-023
gb|CF397197.1|CF397197 RTDS3_2_C09.b2_A022 Drought-stressed... 107 8e-023
gb|DR164166.1|DR164166 RTFE1_47_F01.b1_A029 Roots minus iro... 107 8e-023
gb|DR099835.1|DR099835 STRR1_59_B12.b1_A033 Stem Response R... 99 1e-022
gb|CX649821.1|CX649821 COLD1_41_E05.g1_A029 Root cold Pinus... 106 1e-022
gb|CO176572.1|CO176572 NDL1_62_G03.g1_A029 Needles control ... 106 2e-022
gb|DR023481.1|DR023481 STRS1_58_A10.b1_A034 Shoot tip pitch... 106 2e-022
gb|DR024455.1|DR024455 STRS1_65_C08.b1_A034 Shoot tip pitch... 106 2e-022
gb|DR019184.1|DR019184 STRS1_28_G08.b2_A034 Shoot tip pitch... 105 3e-022
gb|DR096653.1|DR096653 STRR1_29_H01.b1_A033 Stem Response R... 105 3e-022
gb|DR017196.1|DR017196 STRS1_14_E02.g1_A034 Shoot tip pitch... 105 4e-022
gb|BE762133.1|BE762133 NXCI_081_H03_F NXCI (Nsf Xylem Compr... 105 5e-022
gb|DR388603.1|DR388603 RTHG1_29_G08.b1_A029 Roots plus adde... 105 5e-022
gb|CO159644.1|CO159644 FLD1_14_H03.g1_A029 Root flooded Pin... 104 7e-022
gb|CO163560.1|CO163560 FLD1_42_H09.b1_A029 Root flooded Pin... 104 7e-022
gb|CO366504.1|CO366504 RTK1_28_F09.b1_A029 Roots minus pota... 104 7e-022
gb|DR093096.1|DR093096 STRR1_6_B04.b1_A033 Stem Response Re... 104 7e-022
gb|DR015813.1|DR015813 STRS1_5_F11.g1_A034 Shoot tip pitch ... 104 1e-021
gb|DR024108.1|DR024108 STRS1_62_A06.g1_A034 Shoot tip pitch... 104 1e-021
gb|DR072788.1|DR072788 RTDK1_28_D01.g1_A029 Roots, dark Pin... 104 1e-021
gb|CF392294.1|CF392294 RTDR3_7_D10.b1_A022 Loblolly pine ro... 103 1e-021
gb|CO363521.1|CO363521 RTK1_10_F05.b1_A029 Roots minus pota... 103 1e-021
gb|BX248899.1|BX248899 BX248899 Pinus pinaster differenciat... 103 2e-021
gb|CF389382.1|CF389382 RTDR2_7_B10.b1_A021 Loblolly pine ro... 103 2e-021
gb|CF395665.1|CF395665 RTDS2_16_C04.g1_A021 Drought-stresse... 103 2e-021
gb|CO159504.1|CO159504 FLD1_14_B06.b1_A029 Root flooded Pin... 103 2e-021
gb|CO160954.1|CO160954 FLD1_25_E02.g1_A029 Root flooded Pin... 103 2e-021
gb|CV031446.1|CV031446 RTNACL1_1_D07.g1_A029 Roots plus add... 103 2e-021
gb|DR090237.1|DR090237 RTAL1_13_D08.g1_A029 Roots plus adde... 103 2e-021
gb|DR112917.1|DR112917 RTS1_31_C10.g1_A029 Roots minus sulf... 103 2e-021
gb|DR168289.1|DR168289 RTPHOS1_24_B04.g1_A029 Roots minus p... 103 2e-021
gb|DR683218.1|DR683218 EST1073294 Normalized pine embryo li... 103 2e-021
gb|BF010920.1|BF010920 NXCI_094_F10_F NXCI (Nsf Xylem Compr... 102 3e-021
gb|CO165223.1|CO165223 FLD1_53_D08.b1_A029 Root flooded Pin... 102 3e-021
gb|DR021640.1|DR021640 STRS1_46_B08.b1_A034 Shoot tip pitch... 102 3e-021
gb|CV035264.1|CV035264 RTNACL1_14_H03.g1_A029 Roots plus ad... 82 4e-021
gb|DR015862.1|DR015862 STRS1_6_D07.b1_A034 Shoot tip pitch ... 100 9e-021
>gb|CO169484.1|CO169484 NDL1_7_H09.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_H09_A029 3', mRNA sequence
Length = 705
Score = 122 bits (261), Expect = 3e-027
Identities = 47/94 (50%), Positives = 68/94 (72%)
Frame = -2 / +2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
E A+ + ++ +G++VTWAPQ +VL+HP+VGGFLTHNGWNST+E+IS GVPM+ P
Sbjct: 62 ECAAITEDYLHCIKDQGLLVTWAPQLKVLSHPSVGGFLTHNGWNSTIESISMGVPMIGWP 241
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKA 450
+QF N R+ D+WKVG +L G+ E G +++
Sbjct: 242 YWSEQFLNCRFSRDIWKVGMDLEGKADENGLIRS 343
>gb|DR024314.1|DR024314 STRS1_64_C03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_C03_A034 3', mRNA sequence
Length = 729
Score = 121 bits (259), Expect = 6e-027
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = -2 / +1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP + +GRG VTWAPQ VL+HP+VGGFLTH+GWNSTVE+I GVPM+C P
Sbjct: 181 QSAVLPQDFMERSQGRGFFVTWAPQSRVLSHPSVGGFLTHSGWNSTVESICAGVPMICWP 360
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGE 477
+Q N R+V +WK+G E+ E
Sbjct: 361 FFAEQQTNRRFVDHIWKIGFEMPEE 435
>gb|BX255181.1|BX255181 BX255181 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP112D05 similar to Flavonol 3 O
glucosyltransferase 5, mRNA sequence
Length = 687
Score = 120 bits (257), Expect = 1e-026
Identities = 44/82 (53%), Positives = 62/82 (75%)
Frame = -2 / +1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E +GRG++V WAPQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 106 ESAILPKEFIEETKGRGLLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWP 285
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N ++VC+ W +G ++
Sbjct: 286 FFAEQETNAKFVCEEWGIGMQV 351
>gb|DR060675.1|DR060675 RTNIT1_29_G03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_G03_A029 3', mRNA sequence
Length = 852
Score = 120 bits (256), Expect = 1e-026
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = -2 / +1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V W PQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 127 ESAILPKEFIEETKDRGLLVGWVPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMICWP 306
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ +Q N ++VC+ W +G L
Sbjct: 307 FYAEQHTNAKFVCEEWSIGLHL 372
>gb|DR743959.1|DR743959 RTCU1_19_G01.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_G01_A029 3', mRNA sequence
Length = 763
Score = 120 bits (256), Expect = 1e-026
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V W PQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 108 ESAILPKEFIEETKDRGLLVGWVPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMICWP 287
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ +Q N ++VC+ W +G L
Sbjct: 288 FYAEQHTNAKFVCEEWSIGLHL 353
>gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_G01_A029 5', mRNA sequence
Length = 795
Score = 120 bits (256), Expect = 1e-026
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = -2 / +2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V W PQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 344 ESAILPKEFIEETKDRGLLVGWVPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMICWP 523
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ +Q N ++VC+ W +G L
Sbjct: 524 FYAEQHTNAKFVCEEWSIGLHL 589
>gb|BX255284.1|BX255284 BX255284 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP004A03 similar to Flavonol 3 O
glucosyltransferase, mRNA sequence
Length = 592
Score = 118 bits (252), Expect = 5e-026
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V WAPQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 135 ESAILPKEFVEETKDRGVLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWP 314
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N ++VC+ W +G ++
Sbjct: 315 FFAEQETNAKFVCEEWGIGMQV 380
>gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP089F10 similar to Flavonol 3 O
glucosyltransferase, mRNA sequence
Length = 687
Score = 117 bits (250), Expect = 1e-025
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = -2 / +2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V WAPQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 272 ESAILPKEFVEETKDRGVLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWP 451
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N ++VC+ W +G ++
Sbjct: 452 FFAEQETNAKFVCEEW*IGMQV 517
>gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_F06_A029 5', mRNA sequence
Length = 896
Score = 117 bits (250), Expect = 1e-025
Identities = 47/92 (51%), Positives = 63/92 (68%)
Frame = -2 / -3
Query: 743 IRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPM 564
I G E+ LPDG E+ + R ++V WAPQ +VLAH +VG F+TH GWNST+E+IS GVP+
Sbjct: 639 IAGGEAAILPDGFEERTKDRALLVKWAPQVKVLAHTSVGLFVTHCGWNSTLESISMGVPV 460
Query: 563 VCCPRHGDQFGNMRYVCDVWKVGTELVGEQLE 468
V P DQF N R+ ++WKVG + G L+
Sbjct: 459 VGFPYFADQFLNCRFAKEIWKVGLDFEGVDLD 364
>gb|BE187204.1|BE187204 NXNV_160_E12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_160_E12 5' similar to Arabidopsis thaliana
sequence At1g22340 hypothetical protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 533
Score = 116 bits (249), Expect = 1e-025
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V WAPQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 3 ESAILPKEFIEETKDRGMLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWP 182
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N ++VC+ W +G ++
Sbjct: 183 FFAEQETNAKFVCEEWGIGMQV 248
>gb|DR116517.1|DR116517 RTMG1_1_A03.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_1_A03_A029 3', mRNA sequence
Length = 732
Score = 116 bits (249), Expect = 1e-025
Identities = 45/93 (48%), Positives = 63/93 (67%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE++G+G+VV W Q +VL+HP+V GF+TH GWNS +E+I+
Sbjct: 56 LRPDIVSSTVSDCLPHGFMDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIA 235
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVPMV P DQF N + + D WK+G L G
Sbjct: 236 GGVPMVGFPLWADQFTNSKLMADEWKIGYRLNG 334
>dbj|BD224494.1| Materials and methods for the modification of plant lignin content
Length = 762
Score = 116 bits (249), Expect = 1e-025
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V WAPQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 105 ESAILPKEFIEETKDRGMLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWP 284
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N ++VC+ W +G ++
Sbjct: 285 FFAEQETNAKFVCEEWGIGMQV 350
>gb|CF470501.1|CF470501 RTDS1_17_D08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_D08_A015 5', mRNA sequence
Length = 677
Score = 116 bits (248), Expect = 2e-025
Identities = 45/93 (48%), Positives = 63/93 (67%)
Frame = -2 / +3
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE++G+G+VV W Q +VL+HP+V GF+TH GWNS +E+I+
Sbjct: 279 LRPDIVSSTVSDCLPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIA 458
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVPMV P DQF N + + D WK+G L G
Sbjct: 459 GGVPMVGFPLWADQFTNSKLMVDEWKIGYRLSG 557
>gb|CO364236.1|CO364236 RTK1_14_B09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_B09_A029 5', mRNA sequence
Length = 879
Score = 116 bits (248), Expect = 2e-025
Identities = 45/93 (48%), Positives = 63/93 (67%)
Frame = -2 / -3
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE++G+G+VV W Q +VL+HP+V GF+TH GWNS +E+I+
Sbjct: 526 LRPDIVSSTVSDCLPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIA 347
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVPMV P DQF N + + D WK+G L G
Sbjct: 346 GGVPMVGFPLWADQFTNSKLMVDEWKIGYRLSG 248
>gb|BE187215.1|BE187215 NXNV_160_F11_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_160_F11 5' similar to Arabidopsis thaliana
sequence At1g78270 similar to glucoronosyl
transferase-like protein; similar to ESTs gb|AI996767.1,
emb|Z46520.1, gb|T44500.1, and gb|AI099822.1 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 330
Score = 116 bits (247), Expect = 3e-025
Identities = 43/79 (54%), Positives = 59/79 (74%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V WAPQ +VL+HP+VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 3 ESAILPKEFIEETKDRGMLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWP 182
Query: 551 RHGDQFGNMRYVCDVWKVG 495
+Q N ++VC+ W +G
Sbjct: 183 FFAEQETNAKFVCEEWGIG 239
>gb|CF397284.1|CF397284 RTDS3_2_C09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_C09_A022 5', mRNA sequence
Length = 736
Score = 116 bits (247), Expect = 3e-025
Identities = 45/94 (47%), Positives = 62/94 (65%)
Frame = -2 / +3
Query: 761 VVRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAI 582
V+RP+++ S LPD DE+ +G+VV W Q +VL+HP+V GF+TH GWNS +E+I
Sbjct: 279 VLRPDIVSSTVSDCLPDAFLDEIERQGLVVPWCNQLQVLSHPSVAGFITHCGWNSMLESI 458
Query: 581 SEGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
S GVPM+ P DQF N + + D WK+G L G
Sbjct: 459 SRGVPMIGFPFWADQFTNCKLMADEWKIGYSLNG 560
>gb|CF397459.1|CF397459 RTDS3_3_C06.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_3_C06_A022 5', mRNA sequence
Length = 701
Score = 115 bits (246), Expect = 3e-025
Identities = 45/93 (48%), Positives = 63/93 (67%)
Frame = -2 / -3
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE++G+G+VV W Q +VL+HP+V GF+TH GWNS +E+I+
Sbjct: 588 LRPDIVSSTVSDFLPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIA 409
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVPMV P DQF N + + D WK+G L G
Sbjct: 408 GGVPMVGFPLWADQFTNSKLMVDEWKIGYRLSG 310
>gb|DR094542.1|DR094542 STRR1_15_F01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_F01_A033 3', mRNA sequence
Length = 724
Score = 104 bits (221), Expect(2) = 4e-025
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = -2 / +2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+ ALP+G ++ + +G+VV W Q VL+HP+VGGF TH GWNST+E++S GVPM+ P
Sbjct: 26 DGDALPEGFLEKAKNQGLVVPWCSQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVFP 205
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ DQ+ N V + WK+G L
Sbjct: 206 QGVDQYTNRMLVVNQWKIGLGL 271
Score = 30.9 bits (61), Expect(2) = 4e-025
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 473 LERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+ERG++ A+ L G++ GEE++ + E +
Sbjct: 296 IERGEIARAVKFLVGSQAGEEMRRKSNEIR 385
>gb|CF470473.1|CF470473 RTDS1_17_C10.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_C10_A015 5', mRNA sequence
Length = 725
Score = 114 bits (244), Expect = 7e-025
Identities = 44/93 (47%), Positives = 63/93 (67%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE++G+G+VV W Q +VL+HP+V GF+TH GWNS +E+I+
Sbjct: 185 LRPDIVSSTVSDGLPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIA 364
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 365 GGVPIVGFPFWADQFTNSKLMADEWKIGYRLSG 463
>gb|CF470929.1|CF470929 RTDS1_15_D01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_15_D01_A015 5', mRNA sequence
Length = 782
Score = 114 bits (244), Expect = 7e-025
Identities = 44/91 (48%), Positives = 62/91 (68%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE++G+G+VV W Q +VL+HP+V GF+TH GWNS +E+I+
Sbjct: 251 LRPDIVSSTVSDCLPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIA 430
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTEL 486
GVPMV P DQF N + + D WK+G L
Sbjct: 431 GGVPMVGFPLWADQFTNSKLMVDEWKIGYRL 523
>gb|BE644117.1|BE644117 NXCI_054_F12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_054_F12 5' similar to Arabidopsis
thaliana sequence At1g78270 similar to glucoronosyl
transferase-like protein; similar to ESTs gb|AI996767.1,
emb|Z46520.1, gb|T44500.1, and gb|AI099822.1 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 365
Score = 113 bits (242), Expect = 1e-024
Identities = 42/82 (51%), Positives = 60/82 (73%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E + RG++V WAPQ +VL+H +VGGFLTH+GWNST+E+IS GVPM+C P
Sbjct: 15 ESAILPKEFIEETKDRGLLVGWAPQIKVLSHTSVGGFLTHSGWNSTLESISAGVPMMCWP 194
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N ++VC+ W +G ++
Sbjct: 195 FFAEQETNAKFVCEEWGIGMQV 260
>gb|CF390898.1|CF390898 RTDR3_2_B12.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_B12_A022 5', mRNA
sequence
Length = 776
Score = 113 bits (242), Expect = 1e-024
Identities = 46/98 (46%), Positives = 64/98 (65%)
Frame = -2 / +1
Query: 773 PLRVVVRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNST 594
P V+RP+++ S LPDG DEV +G+VV W Q +VL+H +V GF+TH GWNS
Sbjct: 331 PFLWVLRPDIVASTVSDLLPDGFLDEVGSQGLVVPWCNQLQVLSHSSVAGFITHCGWNSM 510
Query: 593 VEAISEGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
+EAI+ GVPM+ P DQF N +++ D WK+G + G
Sbjct: 511 LEAIALGVPMLGFPFWADQFTNCKFMADEWKLGFRVSG 624
>gb|CO161081.1|CO161081 FLD1_26_C01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_26_C01_A029 5', mRNA sequence
Length = 919
Score = 100 bits (212), Expect(2) = 2e-024
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = -2 / +2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+ AL +G ++ + +G+VV W Q VL+HP+VGGF TH GWNST+E++S GVPM+ P
Sbjct: 332 DGDALSEGFLEKTKNQGLVVPWCTQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVFP 511
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ DQ+ N V + WK+G L
Sbjct: 512 QGIDQYTNRMLVVNQWKIGLGL 577
Score = 32.7 bits (65), Expect(2) = 2e-024
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 473 LERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+ERG++ A+ L G+K GEE++ + E +
Sbjct: 602 IERGEIARAVKFLVGSKAGEEMRRKSNEIR 691
>gb|DR015919.1|DR015919 STRS1_6_B08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_B08_A034 5', mRNA sequence
Length = 775
Score = 100 bits (212), Expect(2) = 2e-024
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = -2 / +2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+ AL +G ++ + +G+VV W Q VL+HP+VGGF TH GWNST+E++S GVPM+ P
Sbjct: 230 DGDALSEGFLEKTKNQGLVVPWCTQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVFP 409
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ DQ+ N V + WK+G L
Sbjct: 410 QGIDQYTNRMLVVNQWKIGLGL 475
Score = 32.7 bits (65), Expect(2) = 2e-024
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 473 LERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+ERG++ A+ L G+K GEE++ + E +
Sbjct: 500 IERGEIARAVKFLVGSKAGEEMRRKSNEIR 589
>gb|CO161007.1|CO161007 FLD1_26_C01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_26_C01_A029 3', mRNA sequence
Length = 761
Score = 100 bits (212), Expect(2) = 2e-024
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = -2 / +2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+ AL +G ++ + +G+VV W Q VL+HP+VGGF TH GWNST+E++S GVPM+ P
Sbjct: 128 DGDALSEGFLEKTKNQGLVVPWCTQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVFP 307
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ DQ+ N V + WK+G L
Sbjct: 308 QGIDQYTNRMLVVNQWKIGLGL 373
Score = 32.7 bits (65), Expect(2) = 2e-024
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 473 LERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+ERG++ A+ L G+K GEE++ + E +
Sbjct: 398 IERGEIARAVKFLVGSKAGEEMRRKSNEIR 487
>gb|CO158429.1|CO158429 FLD1_6_G10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_G10_A029 5', mRNA sequence
Length = 696
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 308 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 487
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 488 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 586
>gb|CO159223.1|CO159223 FLD1_12_F05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_12_F05_A029 3', mRNA sequence
Length = 803
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 124 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 303
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 304 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 402
>gb|CO160872.1|CO160872 FLD1_25_E02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_E02_A029 3', mRNA sequence
Length = 822
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 277 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 456
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 457 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 555
>gb|CO161871.1|CO161871 FLD1_31_E09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_E09_A029 5', mRNA sequence
Length = 816
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 526 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 705
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 706 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 804
>gb|CO164784.1|CO164784 FLD1_50_G01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G01_A029 3', mRNA sequence
Length = 831
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 124 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 303
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 304 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 402
>gb|CO165060.1|CO165060 FLD1_52_C08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_C08_A029 3', mRNA sequence
Length = 898
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +3
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 315 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 494
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 495 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 593
>gb|CO165133.1|CO165133 FLD1_52_C08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_C08_A029 5', mRNA sequence
Length = 899
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 344 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 523
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 524 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 622
>gb|CO369423.1|CO369423 RTK1_47_B12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_47_B12_A029 3', mRNA sequence
Length = 854
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 310 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 489
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 490 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 588
>gb|DR017118.1|DR017118 STRS1_14_E02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_14_E02_A034 3', mRNA sequence
Length = 776
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +3
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 189 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 368
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 369 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 467
>gb|DR020338.1|DR020338 STRS1_36_F03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_F03_A034 3', mRNA sequence
Length = 844
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +3
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 165 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 344
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 345 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 443
>gb|DR023083.1|DR023083 STRS1_55_H08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_H08_A034 3', mRNA sequence
Length = 724
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 32 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 211
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 212 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 310
>gb|DR093166.1|DR093166 STRR1_6_B04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_6_B04_A033 5', mRNA sequence
Length = 865
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 449 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 628
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 629 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 727
>gb|DR099649.1|DR099649 STRR1_57_D02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_57_D02_A033 3', mRNA sequence
Length = 750
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +2
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 128 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 307
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 308 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 406
>gb|DR101174.1|DR101174 STRR1_71_C05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_71_C05_A033 3', mRNA sequence
Length = 876
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 184 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 363
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 364 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 462
>gb|DR101844.1|DR101844 STRR1_76_F02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_F02_A033 3', mRNA sequence
Length = 772
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 184 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 363
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 364 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 462
>gb|DR385544.1|DR385544 RTHG1_9_G06.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_G06_A029 3', mRNA sequence
Length = 823
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 130 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 309
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 310 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 408
>gb|DR385625.1|DR385625 RTHG1_9_G06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_G06_A029 5', mRNA sequence
Length = 810
Score = 112 bits (239), Expect = 3e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +1
Query: 758 VRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAIS 579
+RP+++ S LP G DE + +G+VV W Q +VL+HP+VGGF+TH GWNS +E+I+
Sbjct: 109 LRPDIVSSTVSDCLPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIA 288
Query: 578 EGVPMVCCPRHGDQFGNMRYVCDVWKVGTELVG 480
GVP+V P DQF N + + D WK+G L G
Sbjct: 289 FGVPLVGFPFWNDQFTNCKLMADEWKIGFRLSG 387
>gb|DR112323.1|DR112323 RTS1_27_H07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_27_H07_A029 3', mRNA sequence
Length = 647
Score = 111 bits (238), Expect = 4e-024
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = -2 / +3
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LPDG E+ + R ++V WAPQ +VLAH +VG FLTH GWNST+E+IS GVP+V P D
Sbjct: 9 LPDGFEERTKDRALLVRWAPQVKVLAHTSVGLFLTHAGWNSTLESISMGVPVVGLPYFAD 188
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQV 456
Q+ N R+ DVW+VG G ++ +V
Sbjct: 189 QYLNCRFAQDVWEVGLNFEGVEVGEQKV 272
>gb|DR020433.1|DR020433 STRS1_37_A03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_37_A03_A034 3', mRNA sequence
Length = 793
Score = 98.7 bits (209), Expect(2) = 5e-024
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+ AL +G ++ + +G+VV W Q VL+HP+VGGF TH GWNST+E+++ GVPM+ P
Sbjct: 105 DGDALSEGFLEKTKNQGLVVPWCTQLSVLSHPSVGGFFTHGGWNSTMESLTLGVPMLVFP 284
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ DQ+ N V + WK+G L
Sbjct: 285 QGIDQYTNRMLVVNQWKIGLGL 350
Score = 32.7 bits (65), Expect(2) = 5e-024
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2 / +3
Query: 473 LERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+ERG++ A+ L G+K GEE++ + E +
Sbjct: 375 IERGEIARAVKFLVGSKAGEEMRRKSNEIR 464
>gb|DR020500.1|DR020500 STRS1_37_A03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_37_A03_A034 5', mRNA sequence
Length = 678
Score = 98.7 bits (209), Expect(2) = 5e-024
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+ AL +G ++ + +G+VV W Q VL+HP+VGGF TH GWNST+E+++ GVPM+ P
Sbjct: 90 DGDALSEGFLEKTKNQGLVVPWCTQLSVLSHPSVGGFFTHGGWNSTMESLTLGVPMLVFP 269
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+ DQ+ N V + WK+G L
Sbjct: 270 QGIDQYTNRMLVVNQWKIGLGL 335
Score = 32.7 bits (65), Expect(2) = 5e-024
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2 / +3
Query: 473 LERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+ERG++ A+ L G+K GEE++ + E +
Sbjct: 360 IERGEIARAVKFLVGSKAGEEMRRKSNEIR 449
>gb|CF402964.1|CF402964 RTWW1_24_E04.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_24_E04_A015 3', mRNA sequence
Length = 680
Score = 111 bits (237), Expect = 6e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +2
Query: 764 VVVRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEA 585
V+ RPN S LPDG +E + RG+VV W Q VL+HP++GGF +H GWNST+E+
Sbjct: 74 VLRRPNNECAEVSSMLPDGFLNETKQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLES 253
Query: 584 ISEGVPMVCCPRHGDQFGNMRYVCDVWKVGTEL 486
IS G+P++ P G+QF N +++ D WK+G L
Sbjct: 254 ISFGLPILGFPLGGEQFVNCKFIVDEWKIGMRL 352
>gb|CF403057.1|CF403057 RTWW1_24_E04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_24_E04_A015 5', mRNA sequence
Length = 672
Score = 111 bits (237), Expect = 6e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / +3
Query: 764 VVVRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEA 585
V+ RPN S LPDG +E + RG+VV W Q VL+HP++GGF +H GWNST+E+
Sbjct: 315 VLRRPNNECAEVSSMLPDGFLNETKQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLES 494
Query: 584 ISEGVPMVCCPRHGDQFGNMRYVCDVWKVGTEL 486
IS G+P++ P G+QF N +++ D WK+G L
Sbjct: 495 ISFGLPILGFPLGGEQFVNCKFIVDEWKIGMRL 593
>gb|BX676981.1|BX676981 BX676981 RN Pinus pinaster cDNA clone RN15E7, mRNA sequence
Length = 565
Score = 111 bits (237), Expect = 6e-024
Identities = 42/81 (51%), Positives = 59/81 (72%)
Frame = -2 / +1
Query: 728 SGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPR 549
S LP ++V+ R +V+WAPQ +VL+HP+VGGFLTH+GWNST+E+I GVPM+ P
Sbjct: 175 SAVLPPEFLEKVKDRSFLVSWAPQIKVLSHPSVGGFLTHSGWNSTLESIYAGVPMISWPF 354
Query: 548 HGDQFGNMRYVCDVWKVGTEL 486
+Q N R+V +VWK+G E+
Sbjct: 355 FAEQQTNRRFVSEVWKIGMEM 417
>gb|DR068520.1|DR068520 RTDK1_1_G05.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_1_G05_A029 3', mRNA sequence
Length = 643
Score = 111 bits (237), Expect = 6e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / -3
Query: 764 VVVRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEA 585
V+ RPN S LPDG +E + RG+VV W Q VL+HP++GGF +H GWNST+E+
Sbjct: 290 VLRRPNNECAEVSSMLPDGFLNETKQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLES 111
Query: 584 ISEGVPMVCCPRHGDQFGNMRYVCDVWKVGTEL 486
IS G+P++ P G+QF N +++ D WK+G L
Sbjct: 110 ISFGLPILGFPLGGEQFVNCKFIVDEWKIGMRL 12
>gb|DR068609.1|DR068609 RTDK1_1_G05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_1_G05_A029 5', mRNA sequence
Length = 728
Score = 111 bits (237), Expect = 6e-024
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -2 / -2
Query: 764 VVVRPNLIRGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEA 585
V+ RPN S LPDG +E + RG+VV W Q VL+HP++GGF +H GWNST+E+
Sbjct: 565 VLRRPNNECAEVSSMLPDGFLNETKQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLES 386
Query: 584 ISEGVPMVCCPRHGDQFGNMRYVCDVWKVGTEL 486
IS G+P++ P G+QF N +++ D WK+G L
Sbjct: 385 ISFGLPILGFPLGGEQFVNCKFIVDEWKIGMRL 287
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 334,167,532
Number of Sequences: 355925
Number of extensions: 3944961
Number of successful extensions: 41069
Number of sequences better than 1.0e-020: 116
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11053117225
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)