TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430769.2.1
(617 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BD224370.1| Materials and methods for the modification ... 118 6e-031
dbj|BD224282.1| Materials and methods for the modification ... 118 6e-031
gb|DR057447.1|DR057447 RTNIT1_5_H03.g1_A029 Roots minus nit... 118 1e-030
gb|DR179858.1|DR179858 RTMNUT1_25_A07.b1_A029 Roots minus m... 118 1e-030
gb|DR016637.1|DR016637 STRS1_11_G01.b1_A034 Shoot tip pitch... 118 1e-030
gb|CO363617.1|CO363617 RTK1_10_G01.g1_A029 Roots minus pota... 118 1e-030
gb|DR057359.1|DR057359 RTNIT1_5_H03.b1_A029 Roots minus nit... 118 1e-030
gb|CV033261.1|CV033261 RTNACL1_33_H07.b1_A029 Roots plus ad... 118 1e-030
gb|DR016472.1|DR016472 STRS1_10_G09.b1_A034 Shoot tip pitch... 118 1e-030
gb|DR694201.1|DR694201 EST1084292 Normalized pine embryo li... 118 1e-030
gb|DR016561.1|DR016561 STRS1_10_G09.g1_A034 Shoot tip pitch... 118 1e-030
gb|DR016726.1|DR016726 STRS1_11_G01.g1_A034 Shoot tip pitch... 118 1e-030
gb|DR070835.1|DR070835 RTDK1_15_H11.g1_A029 Roots, dark Pin... 118 1e-030
gb|CO364800.1|CO364800 RTK1_21_H02.g1_A029 Roots minus pota... 118 1e-030
gb|CO165535.1|CO165535 FLD1_55_E08.b1_A029 Root flooded Pin... 118 1e-030
gb|DR021387.1|DR021387 STRS1_44_G05.b1_A034 Shoot tip pitch... 118 1e-030
gb|DR059769.1|DR059769 RTNIT1_19_D12.g1_A029 Roots minus ni... 118 1e-030
gb|DR094257.1|DR094257 STRR1_13_A09.g1_A033 Stem Response R... 118 1e-030
gb|CO363528.1|CO363528 RTK1_10_G01.b1_A029 Roots minus pota... 118 1e-030
gb|CX652183.1|CX652183 COLD1_57_B03.g1_A029 Root cold Pinus... 118 1e-030
gb|CO174891.1|CO174891 NDL1_46_H12.g1_A029 Needles control ... 118 1e-030
gb|DR012852.1|DR012852 HEAT1_15_H09.b1_A029 Root at 37 C fo... 118 1e-030
gb|CO171539.1|CO171539 NDL1_22_C08.g1_A029 Needles control ... 118 1e-030
gb|CX715837.1|CX715837 RTPQ1_36_G05.g1_A032 Roots treated w... 118 1e-030
gb|CX645523.1|CX645523 COLD1_3_H04.b1_A029 Root cold Pinus ... 118 1e-030
gb|DR054573.1|DR054573 RTCA1_18_E05.b1_A029 Roots minus cal... 118 1e-030
gb|CF470308.1|CF470308 RTDS1_18_B05.g1_A015 Drought-stresse... 118 1e-030
gb|DR048810.1|DR048810 RTBOR1_11_H12.b1_A029 Roots plus add... 118 1e-030
gb|DR070758.1|DR070758 RTDK1_15_H11.b1_A029 Roots, dark Pin... 118 1e-030
gb|DR095922.1|DR095922 STRR1_24_C05.g1_A033 Stem Response R... 118 1e-030
gb|CF669652.1|CF669652 RTCNT1_45_F03.b1_A029 Root control P... 118 1e-030
gb|BX253301.1|BX253301 BX253301 Pinus pinaster differenciat... 118 1e-030
gb|DR068533.1|DR068533 RTDK1_1_H08.b1_A029 Roots, dark Pinu... 118 1e-030
gb|CF470189.1|CF470189 RTDS1_18_B05.b1_A015 Drought-stresse... 118 1e-030
gb|CX651575.1|CX651575 COLD1_53_G11.b1_A029 Root cold Pinus... 118 1e-030
gb|DR179931.1|DR179931 RTMNUT1_25_A07.g1_A029 Roots minus m... 118 1e-030
gb|DR742160.1|DR742160 RTCU1_2_D07.b1_A029 Roots plus added... 118 1e-030
gb|CO174797.1|CO174797 NDL1_46_G12.b1_A029 Needles control ... 118 1e-030
gb|CF395203.1|CF395203 RTDS2_10_H09.b1_A021 Drought-stresse... 118 1e-030
gb|CF471684.1|CF471684 RTDS1_6_C06.b1_A015 Drought-stressed... 118 1e-030
gb|CO165605.1|CO165605 FLD1_55_E08.g1_A029 Root flooded Pin... 117 2e-030
gb|DR095282.1|DR095282 STRR1_20_B04.b1_A033 Stem Response R... 118 3e-030
gb|CO164960.1|CO164960 FLD1_51_H11.b1_A029 Root flooded Pin... 118 3e-030
gb|CO367905.1|CO367905 RTK1_37_A06.g1_A029 Roots minus pota... 118 3e-030
gb|CO165036.1|CO165036 FLD1_51_H11.g1_A029 Root flooded Pin... 118 3e-030
gb|DR095164.1|DR095164 STRR1_19_E12.b1_A033 Stem Response R... 118 3e-030
gb|DR055384.1|DR055384 RTCA1_23_H04.b1_A029 Roots minus cal... 118 3e-030
gb|CO172079.1|CO172079 NDL1_27_B05.b1_A029 Needles control ... 118 3e-030
gb|DR020135.1|DR020135 STRS1_34_H04.g1_A034 Shoot tip pitch... 118 3e-030
gb|DR020059.1|DR020059 STRS1_34_H04.b1_A034 Shoot tip pitch... 118 3e-030
gb|DR047492.1|DR047492 RTBOR1_1_H07.b1_A029 Roots plus adde... 118 3e-030
gb|CO171218.1|CO171218 NDL1_20_A04.b1_A029 Needles control ... 118 3e-030
gb|CF397680.1|CF397680 RTDS3_1_C11.b2_A022 Drought-stressed... 118 3e-030
gb|DR090000.1|DR090000 RTAL1_12_D05.b1_A029 Roots plus adde... 118 3e-030
gb|DT628778.1|DT628778 EST1155348 Subtracted pine embryo li... 118 3e-030
gb|DR095241.1|DR095241 STRR1_19_E12.g1_A033 Stem Response R... 118 3e-030
gb|CO361980.1|CO361980 NDL2_8_G11.b1_A029 Needles control 2... 118 3e-030
gb|CO172129.1|CO172129 NDL1_27_B05.g1_A029 Needles control ... 118 3e-030
gb|CF470362.1|CF470362 RTDS1_17_G11.b1_A015 Drought-stresse... 118 3e-030
gb|CO171283.1|CO171283 NDL1_20_A04.g1_A029 Needles control ... 118 3e-030
gb|DR102481.1|DR102481 STRR1_81_A09.g1_A033 Stem Response R... 118 3e-030
gb|CF471540.1|CF471540 RTDS1_4_F07.b1_A015 Drought-stressed... 118 3e-030
gb|CF389737.1|CF389737 RTDR2_5_A09.b1_A021 Loblolly pine ro... 118 3e-030
gb|CF476722.1|CF476722 RTWW3_3_C08.b1_A022 Well-watered lob... 118 3e-030
gb|CF473849.1|CF473849 RTWW2_19_E08.b1_A021 Well-watered lo... 118 3e-030
gb|DN613057.1|DN613057 EST966107 Subtracted pine embryo lib... 118 4e-030
gb|BX682301.2|BX682301 BX682301 Pinus pinaster differenciat... 116 4e-030
gb|DR021496.1|DR021496 STRS1_45_C03.b1_A034 Shoot tip pitch... 116 5e-030
gb|CO198619.1|CO198619 GEO1_15_E04.b1_A029 Root gravitropis... 116 5e-030
gb|CF389114.1|CF389114 RTDR2_13_E05.g1_A021 Loblolly pine r... 116 5e-030
gb|DR096334.1|DR096334 STRR1_27_G09.b1_A033 Stem Response R... 116 5e-030
gb|DR017108.1|DR017108 STRS1_14_D01.b1_A034 Shoot tip pitch... 116 7e-030
gb|DR017185.1|DR017185 STRS1_14_D01.g1_A034 Shoot tip pitch... 116 7e-030
gb|AF036095.1|AF036095 Pinus taeda caffeoyl-CoA O-methyltra... 115 9e-030
gb|DR095010.1|DR095010 STRR1_18_E11.b1_A033 Stem Response R... 117 1e-029
gb|BX250125.1|BX250125 BX250125 Pinus pinaster differenciat... 118 1e-029
gb|BE187314.1|BE187314 NXNV_162_D07_F Nsf Xylem Normal wood... 115 2e-029
gb|CO367832.1|CO367832 RTK1_37_A06.b1_A029 Roots minus pota... 115 2e-029
gb|DR049734.1|DR049734 RTBOR1_18_E07.g1_A029 Roots plus add... 114 2e-029
gb|DR386565.1|DR386565 RTHG1_16_B12.b1_A029 Roots plus adde... 114 4e-029
gb|DR386644.1|DR386644 RTHG1_16_B12.g1_A029 Roots plus adde... 115 6e-029
gb|DR080960.1|DR080960 RTFEPL1_26_A01.g1_A029 Roots plus ad... 111 1e-028
gb|DR691014.1|DR691014 EST1081100 Normalized pine embryo li... 111 2e-028
gb|CF395194.1|CF395194 RTDS2_10_D08.b1_A021 Drought-stresse... 113 2e-028
gb|CO170687.1|CO170687 NDL1_16_D09.b1_A029 Needles control ... 111 2e-028
gb|CF671193.1|CF671193 RTCNT1_55_H10.b1_A029 Root control P... 118 2e-028
gb|BF010494.1|BF010494 NXCI_084_F11_F NXCI (Nsf Xylem Compr... 111 4e-028
gb|CO369560.1|CO369560 RTK1_48_B06.b1_A029 Roots minus pota... 113 6e-028
gb|DR089573.1|DR089573 RTAL1_9_B12.g1_A029 Roots plus added... 110 1e-027
gb|DR089491.1|DR089491 RTAL1_9_B12.b1_A029 Roots plus added... 110 1e-027
gb|CO364711.1|CO364711 RTK1_21_H02.b1_A029 Roots minus pota... 107 2e-027
gb|BX252414.1|BX252414 BX252414 Pinus pinaster differenciat... 118 4e-026
gb|BX253860.1|BX253860 BX253860 Pinus pinaster differenciat... 118 4e-026
gb|BX254853.1|BX254853 BX254853 Pinus pinaster differenciat... 118 4e-026
gb|BE431347.1|BE431347 NXNV_181_A10_F Nsf Xylem Normal wood... 118 4e-026
gb|BQ700079.1|BQ700079 NXRV134_G08_F NXRV (Nsf Xylem Root w... 118 4e-026
gb|BQ702178.1|BQ702178 NXSI_125_G11_F NXSI (Nsf Xylem Side ... 118 4e-026
gb|CF478947.1|CF478947 RTWW3_21_F05.b1_A022 Well-watered lo... 118 4e-026
gb|CO173204.1|CO173204 NDL1_34_E04.g1_A029 Needles control ... 118 4e-026
gb|CX714902.1|CX714902 RTPQ1_28_C08.b1_A032 Roots treated w... 118 4e-026
gb|AW290002.1|AW290002 NXNV009C02F Nsf Xylem Normal wood Ve... 102 8e-026
gb|CD026654.1|CD026654 NXNV009C02 Nsf Xylem Normal wood Ver... 102 8e-026
gb|DR102419.1|DR102419 STRR1_81_A09.b1_A033 Stem Response R... 102 1e-025
gb|BQ697486.1|BQ697486 NXPV_054_A05_F NXPV (Nsf Xylem Plani... 105 1e-025
gb|CF389038.1|CF389038 RTDR2_13_E05.b1_A021 Loblolly pine r... 116 1e-025
gb|CF390599.1|CF390599 RTDR2_20_B11.b1_A021 Loblolly pine r... 116 1e-025
gb|CF474367.1|CF474367 RTWW2_20_H09.b1_A021 Well-watered lo... 116 1e-025
gb|DR024772.1|DR024772 STRS1_67_H08.b1_A034 Shoot tip pitch... 116 1e-025
gb|DR098038.1|DR098038 STRR1_38_F02.g1_A033 Stem Response R... 116 1e-025
gb|DR098050.1|DR098050 STRR1_38_G02.g1_A033 Stem Response R... 116 1e-025
gb|DR057069.1|DR057069 RTNIT1_2_G12.b1_A029 Roots minus nit... 74 2e-025
gb|DR095857.1|DR095857 STRR1_24_C05.b1_A033 Stem Response R... 100 4e-025
gb|BE761972.1|BE761972 NXCI_075_D10_F NXCI (Nsf Xylem Compr... 114 5e-025
gb|BQ700261.1|BQ700261 NXRV103_C10_F NXRV (Nsf Xylem Root w... 114 5e-025
gb|CF669646.1|CF669646 RTCNT1_45_E09.b1_A029 Root control P... 73 6e-025
gb|AW870155.1|AW870155 NXNV_124_G08_F Nsf Xylem Normal wood... 112 2e-024
gb|DR742229.1|DR742229 RTCU1_2_D07.g1_A029 Roots plus added... 97 3e-024
gb|CF390634.1|CF390634 RTDR2_20_B11.g1_A021 Loblolly pine r... 97 3e-024
gb|DR097044.1|DR097044 STRR1_32_D03.b1_A033 Stem Response R... 96 5e-024
gb|CF669736.1|CF669736 RTCNT1_45_F03.g1_A029 Root control P... 96 5e-024
gb|CO174177.1|CO174177 NDL1_42_G06.b1_A029 Needles control ... 94 2e-023
gb|CF395282.1|CF395282 RTDS2_10_D08.g1_A021 Drought-stresse... 94 8e-023
gb|AW289833.1|AW289833 NXNV006B01F Nsf Xylem Normal wood Ve... 105 2e-022
gb|CD028362.1|CD028362 NXNV006B01 Nsf Xylem Normal wood Ver... 105 2e-022
gb|CO173696.1|CO173696 NDL1_38_G12.b1_A029 Needles control ... 105 2e-022
gb|DR048888.1|DR048888 RTBOR1_11_H12.g1_A029 Roots plus add... 90 4e-022
gb|DR694204.1|DR694204 EST1084295 Normalized pine embryo li... 90 4e-022
gb|DR051826.1|DR051826 RTBOR1_32_D10.g1_A029 Roots plus add... 86 5e-021
gb|CF474427.1|CF474427 RTWW2_20_H09.g1_A021 Well-watered lo... 86 6e-021
>dbj|BD224370.1| Materials and methods for the modification of plant lignin content
Length = 1012
Score = 118 bits (252), Expect(3) = 6e-031
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 562 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 741
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 742 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 837
Score = 34.5 bits (69), Expect(3) = 6e-031
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 472 EKAGVAHKIDFREGPALPVLDE 537
Score = 22.6 bits (43), Expect(3) = 6e-031
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3 / +1
Query: 27 CVQKKKKKK 1
C++KKKKKK
Sbjct: 982 CIKKKKKKK 1008
>dbj|BD224282.1| Materials and methods for the modification of plant lignin content
Length = 1026
Score = 118 bits (252), Expect(3) = 6e-031
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 576 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 755
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 756 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 851
Score = 34.5 bits (69), Expect(3) = 6e-031
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 486 EKAGVAHKIDFREGPALPVLDE 551
Score = 22.6 bits (43), Expect(3) = 6e-031
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 27 CVQKKKKKK 1
C++KKKKKK
Sbjct: 996 CIKKKKKKK 1022
>gb|DR057447.1|DR057447 RTNIT1_5_H03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_5_H03_A029 5', mRNA sequence
Length = 888
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 528 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 707
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 708 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 803
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 438 EKAGVAHKIDFREGPALPVLDE 503
>gb|DR179858.1|DR179858 RTMNUT1_25_A07.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_25_A07_A029 3', mRNA sequence
Length = 869
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 308 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 129
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 128 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 33
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 398 EKAGVAHKIDFREGPALPVLDE 333
>gb|DR016637.1|DR016637 STRS1_11_G01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_G01_A034 3', mRNA sequence
Length = 866
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 312 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 491
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 492 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 587
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 222 EKAGVAHKIDFREGPALPVLDE 287
>gb|CO363617.1|CO363617 RTK1_10_G01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_G01_A029 5', mRNA sequence
Length = 854
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 448 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 627
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 628 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 723
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 358 EKAGVAHKIDFREGPALPVLDE 423
>gb|DR057359.1|DR057359 RTNIT1_5_H03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_5_H03_A029 3', mRNA sequence
Length = 847
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 415 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 594
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 595 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 690
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 325 EKAGVAHKIDFREGPALPVLDE 390
>gb|CV033261.1|CV033261 RTNACL1_33_H07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_33_H07_A029 3', mRNA sequence
Length = 834
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 278 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 99
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 98 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 3
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 368 EKAGVAHKIDFREGPALPVLDE 303
>gb|DR016472.1|DR016472 STRS1_10_G09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_G09_A034 3', mRNA sequence
Length = 835
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 394 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 215
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 214 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 119
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 484 EKAGVAHKIDFREGPALPVLDE 419
>gb|DR694201.1|DR694201 EST1084292 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE933 3' end, mRNA sequence
Length = 836
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 558 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 737
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 738 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 833
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 468 EKAGVAHKIDFREGPALPVLDE 533
>gb|DR016561.1|DR016561 STRS1_10_G09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_G09_A034 5', mRNA sequence
Length = 829
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 518 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 339
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 338 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 243
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 608 EKAGVAHKIDFREGPALPVLDE 543
>gb|DR016726.1|DR016726 STRS1_11_G01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_G01_A034 5', mRNA sequence
Length = 827
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 494 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 673
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 674 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 769
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 404 EKAGVAHKIDFREGPALPVLDE 469
>gb|DR070835.1|DR070835 RTDK1_15_H11.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_15_H11_A029 5', mRNA sequence
Length = 820
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 444 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 623
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 624 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 719
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 354 EKAGVAHKIDFREGPALPVLDE 419
>gb|CO364800.1|CO364800 RTK1_21_H02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_21_H02_A029 5', mRNA sequence
Length = 817
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 534 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 355
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 354 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 259
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 624 EKAGVAHKIDFREGPALPVLDE 559
>gb|CO165535.1|CO165535 FLD1_55_E08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_55_E08_A029 3', mRNA sequence
Length = 815
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 286 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 465
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 466 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 561
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 196 EKAGVAHKIDFREGPALPVLDE 261
>gb|DR021387.1|DR021387 STRS1_44_G05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_44_G05_A034 3', mRNA sequence
Length = 815
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 178 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 357
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 358 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 453
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 88 EKAGVAHKIDFREGPALPVLDE 153
>gb|DR059769.1|DR059769 RTNIT1_19_D12.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_19_D12_A029 5', mRNA sequence
Length = 808
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 504 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 325
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 324 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 229
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 594 EKAGVAHKIDFREGPALPVLDE 529
>gb|DR094257.1|DR094257 STRR1_13_A09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_A09_A033 5', mRNA sequence
Length = 805
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 472 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 651
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 652 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 747
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 382 EKAGVAHKIDFREGPALPVLDE 447
>gb|CO363528.1|CO363528 RTK1_10_G01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_G01_A029 3', mRNA sequence
Length = 792
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 271 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 450
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 451 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 546
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 181 EKAGVAHKIDFREGPALPVLDE 246
>gb|CX652183.1|CX652183 COLD1_57_B03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_B03_A029 5', mRNA sequence
Length = 789
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 398 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 219
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 218 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 123
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 488 EKAGVAHKIDFREGPALPVLDE 423
>gb|CO174891.1|CO174891 NDL1_46_H12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_46_H12_A029 5', mRNA sequence
Length = 781
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 535 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 356
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 355 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 260
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 625 EKAGVAHKIDFREGPALPVLDE 560
>gb|DR012852.1|DR012852 HEAT1_15_H09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_15_H09_A029 3', mRNA sequence
Length = 778
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 235 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 414
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 415 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 510
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 145 EKAGVAHKIDFREGPALPVLDE 210
>gb|CO171539.1|CO171539 NDL1_22_C08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_22_C08_A029 5', mRNA sequence
Length = 762
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 528 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 349
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 348 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 253
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 618 EKAGVAHKIDFREGPALPVLDE 553
>gb|CX715837.1|CX715837 RTPQ1_36_G05.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_36_G05_A032 5', mRNA sequence
Length = 763
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 382 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 203
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 202 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 107
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 472 EKAGVAHKIDFREGPALPVLDE 407
>gb|CX645523.1|CX645523 COLD1_3_H04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_3_H04_A029 3', mRNA sequence
Length = 757
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 341 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 520
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 521 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 616
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 251 EKAGVAHKIDFREGPALPVLDE 316
>gb|DR054573.1|DR054573 RTCA1_18_E05.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_E05_A029 3', mRNA sequence
Length = 752
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 216 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 395
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 396 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 491
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 126 EKAGVAHKIDFREGPALPVLDE 191
>gb|CF470308.1|CF470308 RTDS1_18_B05.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_18_B05_A015 5', mRNA sequence
Length = 745
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 320 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 499
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 500 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 595
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 230 EKAGVAHKIDFREGPALPVLDE 295
>gb|DR048810.1|DR048810 RTBOR1_11_H12.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_11_H12_A029 3', mRNA sequence
Length = 734
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 312 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 491
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 492 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 587
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 222 EKAGVAHKIDFREGPALPVLDE 287
>gb|DR070758.1|DR070758 RTDK1_15_H11.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_15_H11_A029 3', mRNA sequence
Length = 715
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 290 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 469
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 470 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 565
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 200 EKAGVAHKIDFREGPALPVLDE 265
>gb|DR095922.1|DR095922 STRR1_24_C05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_24_C05_A033 5', mRNA sequence
Length = 716
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 475 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 296
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 295 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 200
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 565 EKAGVAHKIDFREGPALPVLDE 500
>gb|CF669652.1|CF669652 RTCNT1_45_F03.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_45_F03_A029 3', mRNA sequence
Length = 709
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 178 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 357
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 358 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 453
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 88 EKAGVAHKIDFREGPALPVLDE 153
>gb|BX253301.1|BX253301 BX253301 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP080H07 similar to CAFFEOYL COA O
METHYLTRANSFERASE, mRNA sequence
Length = 685
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 387 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 566
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 567 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 662
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 297 EKAGVAHKIDFREGPALPVLDE 362
>gb|DR068533.1|DR068533 RTDK1_1_H08.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_1_H08_A029 3', mRNA sequence
Length = 682
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 178 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 357
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 358 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 453
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 88 EKAGVAHKIDFREGPALPVLDE 153
>gb|CF470189.1|CF470189 RTDS1_18_B05.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_18_B05_A015 3', mRNA sequence
Length = 664
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 179 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 358
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 359 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 454
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 89 EKAGVAHKIDFREGPALPVLDE 154
>gb|CX651575.1|CX651575 COLD1_53_G11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_53_G11_A029 3', mRNA sequence
Length = 659
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 237 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 416
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 417 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 512
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 147 EKAGVAHKIDFREGPALPVLDE 212
>gb|DR179931.1|DR179931 RTMNUT1_25_A07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_25_A07_A029 5', mRNA sequence
Length = 655
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 342 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 163
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 162 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 67
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 432 EKAGVAHKIDFREGPALPVLDE 367
>gb|DR742160.1|DR742160 RTCU1_2_D07.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_D07_A029 3', mRNA sequence
Length = 656
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 288 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 467
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 468 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 563
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 198 EKAGVAHKIDFREGPALPVLDE 263
>gb|CO174797.1|CO174797 NDL1_46_G12.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_46_G12_A029 3', mRNA sequence
Length = 630
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 347 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 168
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 167 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 72
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 437 EKAGVAHKIDFREGPALPVLDE 372
>gb|CF395203.1|CF395203 RTDS2_10_H09.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_10_H09_A021 3', mRNA sequence
Length = 622
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 215 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 394
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 395 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 490
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 125 EKAGVAHKIDFREGPALPVLDE 190
>gb|CF471684.1|CF471684 RTDS1_6_C06.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_C06_A015 3', mRNA sequence
Length = 586
Score = 118 bits (252), Expect(2) = 1e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 173 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 352
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 353 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 448
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 83 EKAGVAHKIDFREGPALPVLDE 148
>gb|CO165605.1|CO165605 FLD1_55_E08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_55_E08_A029 5', mRNA sequence
Length = 709
Score = 117 bits (251), Expect(2) = 2e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 286 GSFDFVFVDADKDNYLNYHKRLINLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 465
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 466 FVMELNKDLAVDPRIEISQIPVGDGVTLCRRV 561
Score = 34.5 bits (69), Expect(2) = 2e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP L LD+
Sbjct: 196 EKAGVAHKIDFREGPALPVLDE 261
>gb|DR095282.1|DR095282 STRR1_20_B04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_B04_A033 3', mRNA sequence
Length = 895
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 575 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 396
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 395 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 300
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 665 EKAGVAHKIDFREGPAMPVLDE 600
>gb|CO164960.1|CO164960 FLD1_51_H11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_51_H11_A029 3', mRNA sequence
Length = 843
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 312 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 491
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 492 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 587
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 222 EKAGVAHKIDFREGPAMPVLDE 287
>gb|CO367905.1|CO367905 RTK1_37_A06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_37_A06_A029 5', mRNA sequence
Length = 841
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -1
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 397 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 218
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 217 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 122
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 487 EKAGVAHKIDFREGPAMPVLDE 422
>gb|CO165036.1|CO165036 FLD1_51_H11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_51_H11_A029 5', mRNA sequence
Length = 809
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 503 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 682
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 683 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 778
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 413 EKAGVAHKIDFREGPAMPVLDE 478
>gb|DR095164.1|DR095164 STRR1_19_E12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_19_E12_A033 3', mRNA sequence
Length = 799
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 284 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 463
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 464 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 559
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 194 EKAGVAHKIDFREGPAMPVLDE 259
>gb|DR055384.1|DR055384 RTCA1_23_H04.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_H04_A029 3', mRNA sequence
Length = 781
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 356 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 535
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 536 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 631
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 266 EKAGVAHKIDFREGPAMPVLDE 331
>gb|CO172079.1|CO172079 NDL1_27_B05.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_27_B05_A029 3', mRNA sequence
Length = 777
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / -2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 416 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 237
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 236 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 141
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 506 EKAGVAHKIDFREGPAMPVLDE 441
>gb|DR020135.1|DR020135 STRS1_34_H04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_34_H04_A034 5', mRNA sequence
Length = 774
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 327 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 506
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 507 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 602
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 237 EKAGVAHKIDFREGPAMPVLDE 302
>gb|DR020059.1|DR020059 STRS1_34_H04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_34_H04_A034 3', mRNA sequence
Length = 764
Score = 118 bits (252), Expect(2) = 3e-030
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 525 GAFDFAFVDADKPNYVRYHEQXXXXXXXXXXXVYDNTLWAGTVALPPDAPLSDLDRRFSA 346
G+FDF FVDADK NY+ YH++ YDNTLW G+V PPDAPL R +
Sbjct: 239 GSFDFVFVDADKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRD 418
Query: 345 AIRELNVRLSQDPRVEVCQLAIADGVTICRRV 250
+ ELN L+ DPR+E+ Q+ + DGVT+CRRV
Sbjct: 419 FVMELNKALAVDPRIEISQIPVGDGVTLCRRV 514
Score = 33.6 bits (67), Expect(2) = 3e-030
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 616 ERAGVAGKVAFREGPPLEQLDK 551
E+AGVA K+ FREGP + LD+
Sbjct: 149 EKAGVAHKIDFREGPAMPVLDE 214
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 248,371,618
Number of Sequences: 355925
Number of extensions: 2728989
Number of successful extensions: 177474
Number of sequences better than 1.0e-020: 150
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8358129780
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)