TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419536.2.1
(1366 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U39301.1|PTU39301 Pinus taeda xylem caffeic acid O-methy... 133 2e-043
gb|U70873.1|PRU70873 Pinus radiata O-methyltransferase (omt... 127 3e-042
gb|CO197585.1|CO197585 GEO1_7_B10.g1_A029 Root gravitropism... 132 3e-038
gb|CF387289.1|CF387289 RTDR1_12_B04.b1_A015 Loblolly pine r... 131 4e-037
gb|CF478857.1|CF478857 RTWW3_15_E06.g1_A022 Well-watered lo... 131 5e-037
gb|DR385848.1|DR385848 RTHG1_11_F05.b1_A029 Roots plus adde... 131 5e-037
gb|CX652953.1|CX652953 COLD1_62_B07.g1_A029 Root cold Pinus... 131 6e-037
gb|CF390447.1|CF390447 RTDR2_19_C10.g1_A021 Loblolly pine r... 131 6e-037
gb|CF398420.1|CF398420 RTDS3_12_G12.g1_A022 Drought-stresse... 129 1e-036
gb|BX678852.1|BX678852 BX678852 RS Pinus pinaster cDNA clon... 127 1e-036
gb|CF665309.1|CF665309 RTCNT1_15_E12.b1_A029 Root control P... 128 3e-036
gb|CF665472.1|CF665472 RTCNT1_16_E12.b1_A029 Root control P... 128 3e-036
gb|CF664309.1|CF664309 RTCNT1_9_A12.b1_A029 Root control Pi... 124 4e-035
gb|AF119225.1|AF119225 Pinus radiata caffeic acid ortho-met... 54 5e-034
gb|BX678762.1|BX678762 BX678762 RS Pinus pinaster cDNA clon... 127 1e-033
gb|DR118553.1|DR118553 RTMG1_17_F04.g1_A029 Roots minus mag... 134 1e-030
gb|CX646520.1|CX646520 COLD1_9_H01.g1_A029 Root cold Pinus ... 133 2e-030
gb|CX651603.1|CX651603 COLD1_53_C02.g1_A029 Root cold Pinus... 133 2e-030
gb|DR025455.1|DR025455 STRS1_71_E09.g1_A034 Shoot tip pitch... 133 2e-030
gb|DR071353.1|DR071353 RTDK1_19_G05.b1_A029 Roots, dark Pin... 132 7e-030
gb|CX648030.1|CX648030 COLD1_26_C06.b1_A029 Root cold Pinus... 131 1e-029
gb|AI812857.1|AI812857 20G9 Pine Lambda Zap Xylem library P... 131 1e-029
gb|CF385259.1|CF385259 RTDR1_2_H01.g1_A015 Loblolly pine ro... 131 1e-029
gb|CF387392.1|CF387392 RTDR1_12_B04.g1_A015 Loblolly pine r... 131 1e-029
gb|CF400142.1|CF400142 RTWW1_3_A06.g1_A015 Well-watered lob... 131 1e-029
gb|CF477891.1|CF477891 RTWW3_13_E06.g1_A022 Well-watered lo... 131 1e-029
gb|DR388552.1|DR388552 RTHG1_29_A07.b1_A029 Roots plus adde... 121 3e-028
gb|CO164394.1|CO164394 FLD1_47_F03.g1_A029 Root flooded Pin... 121 4e-028
gb|CO164320.1|CO164320 FLD1_47_F03.b1_A029 Root flooded Pin... 121 4e-028
gb|DR384861.1|DR384861 RTHG1_5_C09.b1_A029 Roots plus added... 121 4e-028
gb|DR386464.1|DR386464 RTHG1_15_H04.b1_A029 Roots plus adde... 120 7e-028
gb|DR090448.1|DR090448 RTAL1_15_D01.b1_A029 Roots plus adde... 120 7e-028
gb|CO167211.1|CO167211 FLD1_67_C10.g1_A029 Root flooded Pin... 120 1e-027
gb|CO167139.1|CO167139 FLD1_67_C10.b1_A029 Root flooded Pin... 120 1e-027
gb|DR742592.1|DR742592 RTCU1_5_F03.b2_A029 Roots plus added... 118 2e-027
gb|CF388135.1|CF388135 RTDR2_1_H07.b1_A021 Loblolly pine ro... 123 2e-027
gb|DR118474.1|DR118474 RTMG1_17_F04.b1_A029 Roots minus mag... 123 3e-027
gb|CX714803.1|CX714803 RTPQ1_27_C08.b1_A032 Roots treated w... 117 5e-027
gb|DR015421.1|DR015421 STRS1_3_A05.g1_A034 Shoot tip pitch ... 122 8e-027
gb|CO175244.1|CO175244 NDL1_53_A11.g1_A029 Needles control ... 116 9e-027
gb|DR384933.1|DR384933 RTHG1_5_C09.g1_A029 Roots plus added... 121 1e-026
gb|CO170121.1|CO170121 NDL1_11_G04.g1_A029 Needles control ... 121 1e-026
gb|CO170118.1|CO170118 NDL1_11_F12.g1_A029 Needles control ... 120 2e-026
gb|DR060400.1|DR060400 RTNIT1_27_C10.g1_A029 Roots minus ni... 120 2e-026
gb|DR094005.1|DR094005 STRR1_11_G04.g1_A033 Stem Response R... 120 2e-026
gb|CO370451.1|CO370451 RTK1_68_A10.b1_A029 Roots minus pota... 96 3e-026
gb|DR020354.1|DR020354 STRS1_36_H04.b1_A034 Shoot tip pitch... 120 3e-026
gb|DR060317.1|DR060317 RTNIT1_27_C10.b1_A029 Roots minus ni... 120 3e-026
gb|DR093928.1|DR093928 STRR1_11_G04.b1_A033 Stem Response R... 120 3e-026
gb|DR386637.1|DR386637 RTHG1_16_B04.g1_A029 Roots plus adde... 120 3e-026
gb|CF665567.1|CF665567 RTCNT1_16_G10.g1_A029 Root control P... 90 5e-026
gb|DR015347.1|DR015347 STRS1_3_A05.b1_A034 Shoot tip pitch ... 119 5e-026
gb|DR101310.1|DR101310 STRR1_72_B03.b1_A033 Stem Response R... 119 5e-026
gb|CO175245.1|CO175245 NDL1_53_A12.g1_A029 Needles control ... 116 6e-026
dbj|BD224327.1| Materials and methods for the modification ... 118 7e-026
dbj|BD224403.1| Materials and methods for the modification ... 118 7e-026
gb|CX653109.1|CX653109 COLD1_63_A10.g1_A029 Root cold Pinus... 118 1e-025
gb|DR072066.1|DR072066 RTDK1_23_H03.g1_A029 Roots, dark Pin... 118 1e-025
gb|BX254093.1|BX254093 BX254093 Pinus pinaster differenciat... 117 1e-025
gb|DR101032.1|DR101032 STRR1_70_C07.b1_A033 Stem Response R... 117 1e-025
gb|BX680279.1|BX680279 BX680279 RS Pinus pinaster cDNA clon... 111 2e-025
gb|DR020424.1|DR020424 STRS1_36_H04.g1_A034 Shoot tip pitch... 116 4e-025
gb|DR069065.1|DR069065 RTDK1_4_D11.g1_A029 Roots, dark Pinu... 116 4e-025
gb|DR078688.1|DR078688 RTFEPL1_6_F04.b1_A029 Roots plus add... 116 4e-025
gb|DR080770.1|DR080770 RTFEPL1_25_C12.b1_A029 Roots plus ad... 116 4e-025
gb|CF385489.1|CF385489 RTDR1_4_C03.b1_A015 Loblolly pine ro... 91 4e-025
gb|CO369886.1|CO369886 RTK1_55_A05.b1_A029 Roots minus pota... 116 5e-025
gb|CX652251.1|CX652251 COLD1_57_H09.g1_A029 Root cold Pinus... 116 5e-025
gb|CX652979.1|CX652979 COLD1_62_D10.g1_A029 Root cold Pinus... 116 5e-025
gb|DR167163.1|DR167163 RTPHOS1_17_D01.b1_A029 Roots minus p... 116 5e-025
gb|DR101998.1|DR101998 STRR1_77_H06.b1_A033 Stem Response R... 115 9e-025
gb|BG275493.1|BG275493 NXSI_139_D08_F NXSI (Nsf Xylem Side ... 114 2e-024
gb|CX653031.1|CX653031 COLD1_63_A10.b1_A029 Root cold Pinus... 113 2e-024
emb|AJ297297.1|PPI297297 Pinus pinaster partial mRNA for ca... 74 3e-024
gb|CX652893.1|CX652893 COLD1_62_D10.b1_A029 Root cold Pinus... 112 6e-024
gb|DR057315.1|DR057315 RTNIT1_5_C05.b1_A029 Roots minus nit... 112 6e-024
gb|DR068995.1|DR068995 RTDK1_4_D11.b1_A029 Roots, dark Pinu... 112 6e-024
gb|DR080794.1|DR080794 RTFEPL1_25_F08.b1_A029 Roots plus ad... 112 6e-024
gb|CO175243.1|CO175243 NDL1_53_A10.g1_A029 Needles control ... 111 8e-024
gb|CO157658.1|CO157658 FLD1_1_E03.b1_A029 Root flooded Pinu... 106 1e-023
gb|CX647162.1|CX647162 COLD1_14_B09.b1_A029 Root cold Pinus... 105 2e-023
gb|BE758644.1|BE758644 NXCI_069_E06_F NXCI (Nsf Xylem Compr... 110 3e-023
gb|BQ696333.1|BQ696333 NXPV_041_B10_F NXPV (Nsf Xylem Plani... 107 2e-022
gb|CF385119.1|CF385119 RTDR1_2_H01.b1_A015 Loblolly pine ro... 81 2e-022
dbj|BD224468.1| Materials and methods for the modification ... 106 3e-022
gb|DR161217.1|DR161217 RTFE1_10_C01.g1_A029 Roots minus iro... 81 4e-022
gb|DR092192.1|DR092192 RTAL1_27_E10.b1_A029 Roots plus adde... 100 5e-022
gb|DT633801.1|DT633801 EST1148732 Normalized pine embryo li... 80 2e-021
emb|AX212322.1| Sequence 1 from Patent WO0159139 77 2e-021
emb|AX212323.1| Sequence 2 from Patent WO0159139 77 2e-021
gb|CX647330.1|CX647330 COLD1_15_G09.b1_A029 Root cold Pinus... 102 5e-021
gb|DR078771.1|DR078771 RTFEPL1_6_F04.g1_A029 Roots plus add... 102 5e-021
gb|CF398398.1|CF398398 RTDS3_12_G12.b1_A022 Drought-stresse... 76 7e-021
gb|AW290074.1|AW290074 NXNV010C10F Nsf Xylem Normal wood Ve... 76 7e-021
gb|CD026734.1|CD026734 NXNV010C10 Nsf Xylem Normal wood Ver... 76 7e-021
gb|BF186028.1|BF186028 NXCI_132_C07_F NXCI (Nsf Xylem Compr... 101 9e-021
>gb|U39301.1|PTU39301 Pinus taeda xylem caffeic acid O-methyltransferase (COMT-1) mRNA,
partial cds
Length = 1279
Score = 133 bits (284), Expect(3) = 2e-043
Identities = 53/103 (51%), Positives = 73/103 (70%)
Frame = +2 / +1
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 613 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 792
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P ADA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 793 QHVGGDMFETVPTADAIFMKWIMHDWNDEDCIKILKNCRKAIP 921
Score = 101 bits (215), Expect(2) = 3e-022
Identities = 50/93 (53%), Positives = 57/93 (61%)
Frame = -2 / -3
Query: 912 LGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCTSV*VGAFATTWARS 733
+ GIAFLQF SI QSS QSC F + ASA G +SNMSP CT A ATTW RS
Sbjct: 926 VSGIAFLQFLSILIQSSSFQSCMIHFMNMASAVGTVSNMSPPTCCTPDRDEAVATTWGRS 747
Query: 732 STLHLTCGNAFEMAWAAVPMPPPTSTSELIPWK 634
+ L G A ++ AVP+PPPTST EL WK
Sbjct: 746 *LMPLMKG*ALTISATAVPVPPPTSTKELREWK 648
Score = 47.8 bits (98), Expect(3) = 2e-043
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 1060 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 1170
Score = 41.8 bits (85), Expect(3) = 2e-043
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 68 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLS 208
+++ L Q E W TFAF +S+A+K + L I D I G A+LS
Sbjct: 100 SEEEELQGQAEAWKCTFAFAESLAVKCVVLLGIPDMIAREGPRATLS 240
Score = 29.0 bits (57), Expect(2) = 3e-022
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -2 / -3
Query: 231 RWTLLSIWDRLAAPPWRWMASAIRRCIADLSAMDFMNAKVVCQSSSC 91
R +S +R+A P R + S I +A D NAKV Q+S+C
Sbjct: 263 RLATISQRERVARGPSRAIMSGIPSKTTHFTANDSANAKVHFQASAC 123
>gb|U70873.1|PRU70873 Pinus radiata O-methyltransferase (omt) mRNA, complete cds
Length = 1421
Score = 127 bits (273), Expect(3) = 3e-042
Identities = 51/103 (49%), Positives = 70/103 (67%)
Frame = +2 / +2
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV I + F ++SLVDVGGG GTA I +A+P + DL HVVA A + + V
Sbjct: 620 IVMKGILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFITGINYDLPHVVATASSLSGV 799
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 800 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 928
Score = 48.3 bits (99), Expect(3) = 3e-042
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +2
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 1067 GKERSEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 1177
Score = 42.8 bits (87), Expect(3) = 3e-042
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +2
Query: 68 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLS 208
+++ L Q E W TFAF +S+A+K + L I D I G A+LS
Sbjct: 104 SEEEELQGQAEAWKCTFAFAESLAVKCVVLLGIPDMIAREGSRATLS 244
>gb|CO197585.1|CO197585 GEO1_7_B10.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_7_B10_A029 5', mRNA sequence
Length = 777
Score = 132 bits (283), Expect(2) = 3e-038
Identities = 50/91 (54%), Positives = 66/91 (72%)
Frame = +2 / -1
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F ++S+VDVGGG GTA I +A+P +K DL HVV+ AP T V + GDMFES+P
Sbjct: 678 FHSLNSIVDVGGGTGTAVAEIVRAYPSIKGINYDLPHVVSTAPHLTGVDHVGGDMFESVP 499
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
DA+ +K ++HDWD +DC+KILKNC+KAIP
Sbjct: 498 MGDAIFMKWIMHDWDDEDCIKILKNCRKAIP 406
Score = 50.6 bits (104), Expect(2) = 3e-038
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2 / -1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW K+ E+G+ DY II + ++S+IE +P
Sbjct: 267 GKERTEEEWKKLLWESGFGDYNIIDIPALQSVIEAFP 157
>gb|CF387289.1|CF387289 RTDR1_12_B04.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_B04_A015 3', mRNA
sequence
Length = 641
Score = 131 bits (280), Expect(2) = 4e-037
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +3
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 12 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 191
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 192 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 320
Score = 47.8 bits (98), Expect(2) = 4e-037
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 459 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 569
>gb|CF478857.1|CF478857 RTWW3_15_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_15_E06_A022 5', mRNA sequence
Length = 662
Score = 131 bits (280), Expect(2) = 5e-037
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / -3
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 633 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 454
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 453 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 325
Score = 47.8 bits (98), Expect(2) = 5e-037
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 186 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 76
>gb|DR385848.1|DR385848 RTHG1_11_F05.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_11_F05_A029 3', mRNA sequence
Length = 757
Score = 131 bits (280), Expect(2) = 5e-037
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +3
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 126 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 305
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 306 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 434
Score = 47.8 bits (98), Expect(2) = 5e-037
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 573 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 683
>gb|CX652953.1|CX652953 COLD1_62_B07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_B07_A029 5', mRNA sequence
Length = 828
Score = 131 bits (280), Expect(2) = 6e-037
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / -3
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 625 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 446
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 445 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 317
Score = 47.8 bits (98), Expect(2) = 6e-037
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 178 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 68
>gb|CF390447.1|CF390447 RTDR2_19_C10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_19_C10_A021 5', mRNA
sequence
Length = 847
Score = 131 bits (280), Expect(2) = 6e-037
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +1
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 199 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 378
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 379 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 507
Score = 47.8 bits (98), Expect(2) = 6e-037
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 646 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 756
>gb|CF398420.1|CF398420 RTDS3_12_G12.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_12_G12_A022 5', mRNA sequence
Length = 609
Score = 129 bits (277), Expect(2) = 1e-036
Identities = 50/99 (50%), Positives = 70/99 (70%)
Frame = +2 / +3
Query: 611 AIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIA 790
AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + VQ +
Sbjct: 12 AILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVG 191
Query: 791 GDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 192 GDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 308
Score = 47.8 bits (98), Expect(2) = 1e-036
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 447 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 557
>gb|BX678852.1|BX678852 BX678852 RS Pinus pinaster cDNA clone RS16A04, mRNA sequence
Length = 591
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = +2 / +3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F G++SLVD+GGG GTA I +A+P ++ DL HVVA AP V+ + GDMFE++P
Sbjct: 33 FDGLTSLVDIGGGTGTAIAEIVRAYPSIRGINYDLPHVVATAPHLPGVEHMGGDMFETVP 212
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
ADA+ +K ++HDW +DC+KILK+C+KAIP
Sbjct: 213 SADAIFMKWIMHDWGDEDCIKILKSCRKAIP 305
Score = 49.2 bits (101), Expect(2) = 1e-036
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW KI SE G+ Y+II + +S+IE +P
Sbjct: 456 GKERTEEEWKKILSEGGFHCYKIITIPDFQSVIEAFP 566
>gb|CF665309.1|CF665309 RTCNT1_15_E12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_E12_A029 3', mRNA sequence
Length = 592
Score = 128 bits (274), Expect(2) = 3e-036
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = +2 / +1
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + VQ + GDMFE++P
Sbjct: 13 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 192
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 193 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 285
Score = 47.8 bits (98), Expect(2) = 3e-036
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 424 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 534
>gb|CF665472.1|CF665472 RTCNT1_16_E12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_16_E12_A029 3', mRNA sequence
Length = 597
Score = 128 bits (274), Expect(2) = 3e-036
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = +2 / +1
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + VQ + GDMFE++P
Sbjct: 13 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 192
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 193 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 285
Score = 47.8 bits (98), Expect(2) = 3e-036
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 429 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 539
>gb|CF664309.1|CF664309 RTCNT1_9_A12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_9_A12_A029 3', mRNA sequence
Length = 649
Score = 124 bits (265), Expect(2) = 4e-035
Identities = 46/91 (50%), Positives = 67/91 (73%)
Frame = +2 / +1
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F ++SLVDVGGG GT+ I +A+P ++ DL HVVA A + + VQ + GDMFE++P
Sbjct: 13 FHSLNSLVDVGGGTGTSVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 192
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
DA+ +K ++HDW+ +DC+KIL+NC+KAIP
Sbjct: 193 TGDAIFMKWIMHDWNVEDCIKILQNCRKAIP 285
Score = 48.3 bits (99), Expect(2) = 4e-035
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 424 GKERSEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 534
>gb|AF119225.1|AF119225 Pinus radiata caffeic acid ortho-methyltransferase (cOMT) gene,
complete cds
Length = 1644
Score = 54.2 bits (112), Expect(5) = 5e-034
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKA 760
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A
Sbjct: 586 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATA 747
Score = 51.0 bits (105), Expect(5) = 5e-034
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +2 / +1
Query: 842 VLHDWDHDDCVKILKNCKKAIP 907
++HDW+ +DC+KILKNC+KAIP
Sbjct: 1165 IMHDWNDEDCIKILKNCRKAIP 1230
Score = 48.3 bits (99), Expect(5) = 5e-034
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW +I E G+S Y II + ++S+IE +P
Sbjct: 1369 GKERSEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 1479
Score = 41.8 bits (85), Expect(5) = 5e-034
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 68 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLS 208
+++ L Q E W TFAF +S+A+K + L I D I G A+LS
Sbjct: 70 SEEEELQGQAEAWKCTFAFAESLAVKCVVLLGIPDMIAREGPRATLS 210
Score = 34.5 bits (69), Expect(5) = 5e-034
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 776 VQFIAGDMFESIPPADAVLLK 838
VQ + GDMFE++P DA+ +K
Sbjct: 1011 VQHVGGDMFETVPTGDAIFMK 1073
>gb|BX678762.1|BX678762 BX678762 RS Pinus pinaster cDNA clone RS14G09, mRNA sequence
Length = 549
Score = 127 bits (273), Expect(2) = 1e-033
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = +2 / +3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F G++SLVD+GGG GTA I +A+P ++ DL HVVA AP V+ + GDMFE++P
Sbjct: 33 FDGLTSLVDIGGGTGTAIAEIVRAYPSIRGINYDLPHVVATAPHLPGVEHMGGDMFETVP 212
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
ADA+ +K ++HDW +DC+KILK+C+KAIP
Sbjct: 213 SADAIFMKWIMHDWGDEDCIKILKSCRKAIP 305
Score = 39.1 bits (79), Expect(2) = 1e-033
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPV 1102
G ER E+EW KI SE G+ Y+II +
Sbjct: 456 GKERTEEEWKKILSEGGFHCYKIITI 533
>gb|DR118553.1|DR118553 RTMG1_17_F04.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_F04_A029 5', mRNA sequence
Length = 607
Score = 134 bits (287), Expect = 1e-030
Identities = 53/138 (38%), Positives = 85/138 (61%)
Frame = +2 / +3
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
F HG WE ++ + N+ +A++++ ++ K + F+ +++LVDVGGG+G
Sbjct: 159 FNKAHGMDPWEYLGNNPEVSKIFNEAMATNTRSVMAFVAKMYEDGFKSVATLVDVGGGMG 338
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
+A I K PH++ LDL HV+A AP T V+ + G+MFE IP ADAV++K +LHDW
Sbjct: 339 SALSIIVKEHPHIRGINLDLPHVIATAPPITGVEHMEGNMFEHIPSADAVMMKWILHDWP 518
Query: 860 HDDCVKILKNCKKAIPPR 913
++CVK+L+ A P +
Sbjct: 519 DEECVKLLRRSYDATPAK 572
>gb|CX646520.1|CX646520 COLD1_9_H01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_H01_A029 5', mRNA sequence
Length = 830
Score = 133 bits (286), Expect = 2e-030
Identities = 53/138 (38%), Positives = 88/138 (63%)
Frame = +2 / -2
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
F HG ++E + F+ ++N+ +A++++ ++ K + F+ +++LVDVGGG+G
Sbjct: 817 FNKAHGMDLFEYLGKNPEFNKILNEAMATNTRSVMASVAKMYEDGFKSMATLVDVGGGMG 638
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
+A I K PH++ LDL HV+A AP T V+ + G+MFE IP ADAV++K +LHDW
Sbjct: 637 SALSIIVKEHPHIRGINLDLPHVIATAPLITGVEHMEGNMFEHIPSADAVMMKWILHDWA 458
Query: 860 HDDCVKILKNCKKAIPPR 913
++CVK+L+ A P +
Sbjct: 457 DEECVKLLRRSYDATPAK 404
>gb|CX651603.1|CX651603 COLD1_53_C02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_53_C02_A029 5', mRNA sequence
Length = 816
Score = 133 bits (286), Expect = 2e-030
Identities = 53/138 (38%), Positives = 88/138 (63%)
Frame = +2 / +1
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
F HG ++E + F+ ++N+ +A++++ ++ K + F+ +++LVDVGGG+G
Sbjct: 379 FNKAHGMDLFEYLGKNPEFNKILNEAMATNTRSVMASVAKMYEDGFKSMATLVDVGGGMG 558
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
+A I K PH++ LDL HV+A AP T V+ + G+MFE IP ADAV++K +LHDW
Sbjct: 559 SALSIIVKEHPHIRGINLDLPHVIATAPLITGVEHMEGNMFEHIPSADAVMMKWILHDWA 738
Query: 860 HDDCVKILKNCKKAIPPR 913
++CVK+L+ A P +
Sbjct: 739 DEECVKLLRRSYDATPAK 792
>gb|DR025455.1|DR025455 STRS1_71_E09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_71_E09_A034 5', mRNA sequence
Length = 665
Score = 133 bits (286), Expect = 2e-030
Identities = 53/138 (38%), Positives = 85/138 (61%)
Frame = +2 / -3
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
F HG WE ++ + N+ +A++++ ++ K + F+ +++LVDVGGG+G
Sbjct: 648 FNKAHGMDPWEYLGNNPEVSKIFNEAMATNTRSVMASVAKMYEDGFKSVATLVDVGGGMG 469
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
+A I K PH++ LDL HV+A AP T V+ + G+MFE IP ADAV++K +LHDW
Sbjct: 468 SALSIIVKEHPHIRGINLDLPHVIATAPPITGVEHMEGNMFEHIPSADAVMMKWILHDWP 289
Query: 860 HDDCVKILKNCKKAIPPR 913
++CVK+L+ A P +
Sbjct: 288 DEECVKLLRRSYDATPAK 235
>gb|DR071353.1|DR071353 RTDK1_19_G05.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_G05_A029 3', mRNA sequence
Length = 743
Score = 132 bits (282), Expect = 7e-030
Identities = 53/138 (38%), Positives = 85/138 (61%)
Frame = +2 / +3
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
F HG WE ++ + + N+ +A++++ ++ K + F +++LVDVGGG+G
Sbjct: 48 FNKAHGMDPWEYLGNNPESNKIFNEAMATNTRSVMASVAKMYEDGFMSMATLVDVGGGMG 227
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
+A I K PH++ LDL HV+A AP T V+ + G+MFE IP ADAV++K +LHDW
Sbjct: 228 SALSIIVKEHPHIRGINLDLPHVIATAPPITGVEHMEGNMFEHIPSADAVMMKWILHDWA 407
Query: 860 HDDCVKILKNCKKAIPPR 913
++CVK+L+ A P +
Sbjct: 408 DEECVKLLRRSYDATPAK 461
>gb|CX648030.1|CX648030 COLD1_26_C06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_C06_A029 3', mRNA sequence
Length = 820
Score = 131 bits (281), Expect = 1e-029
Identities = 53/138 (38%), Positives = 85/138 (61%)
Frame = +2 / +3
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
F HG WE ++ + + N+ +A++++ ++ K + F +++LVDVGGG+G
Sbjct: 9 FNKAHGMDPWEYLGNNPESNKIFNEAMATNTRSVMASVAKMYEDGFMSMATLVDVGGGMG 188
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
+A I K PH++ LDL HV+A AP T V+ + G+MFE IP ADAV++K +LHDW
Sbjct: 189 SALSIIVKEHPHIRGINLDLPHVIATAPPITGVKHMEGNMFEHIPSADAVMMKWILHDWA 368
Query: 860 HDDCVKILKNCKKAIPPR 913
++CVK+L+ A P +
Sbjct: 369 DEECVKLLRRSYDATPAK 422
>gb|AI812857.1|AI812857 20G9 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 535
Score = 131 bits (280), Expect = 1e-029
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +3
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 135 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 314
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 315 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 443
>gb|CF385259.1|CF385259 RTDR1_2_H01.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_2_H01_A015 5', mRNA
sequence
Length = 671
Score = 131 bits (280), Expect = 1e-029
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +1
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 289 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 468
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 469 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 597
>gb|CF387392.1|CF387392 RTDR1_12_B04.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_B04_A015 5', mRNA
sequence
Length = 752
Score = 131 bits (280), Expect = 1e-029
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +3
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 309 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 488
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 489 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 617
>gb|CF400142.1|CF400142 RTWW1_3_A06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_3_A06_A015 5', mRNA sequence
Length = 722
Score = 131 bits (280), Expect = 1e-029
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +2
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 233 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 412
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 413 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 541
>gb|CF477891.1|CF477891 RTWW3_13_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_E06_A022 5', mRNA sequence
Length = 721
Score = 131 bits (280), Expect = 1e-029
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +2 / +3
Query: 599 IVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDV 778
IV AI + F ++SLVDVGGG GTA I +A+P ++ DL HVVA A + + V
Sbjct: 360 IVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGV 539
Query: 779 QFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 907
Q + GDMFE++P DA+ +K ++HDW+ +DC+KILKNC+KAIP
Sbjct: 540 QHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIP 668
>gb|DR388552.1|DR388552 RTHG1_29_A07.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_29_A07_A029 3', mRNA sequence
Length = 794
Score = 121 bits (259), Expect(2) = 3e-028
Identities = 46/93 (49%), Positives = 66/93 (70%)
Frame = +2 / +1
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FES P
Sbjct: 208 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 387
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 388 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPEK 486
Score = 24.9 bits (48), Expect(2) = 3e-028
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 592 GGERTRKQWNDLLQAAGFSISKIV 663
>gb|CO164394.1|CO164394 FLD1_47_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_F03_A029 5', mRNA sequence
Length = 895
Score = 121 bits (259), Expect(2) = 4e-028
Identities = 46/93 (49%), Positives = 66/93 (70%)
Frame = +2 / -3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FES P
Sbjct: 683 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 504
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 503 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDK 405
Score = 24.4 bits (47), Expect(2) = 4e-028
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 299 GGERTRKQWNDLLQGAGFSISKIV 228
>gb|CO164320.1|CO164320 FLD1_47_F03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_F03_A029 3', mRNA sequence
Length = 849
Score = 121 bits (259), Expect(2) = 4e-028
Identities = 46/93 (49%), Positives = 66/93 (70%)
Frame = +2 / -3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FES P
Sbjct: 565 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 386
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 385 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDK 287
Score = 24.4 bits (47), Expect(2) = 4e-028
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 181 GGERTRKQWNDLLQGAGFSISKIV 110
>gb|DR384861.1|DR384861 RTHG1_5_C09.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_5_C09_A029 3', mRNA sequence
Length = 705
Score = 121 bits (259), Expect(2) = 4e-028
Identities = 46/93 (49%), Positives = 66/93 (70%)
Frame = +2 / +2
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FES P
Sbjct: 5 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 184
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 185 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDK 283
Score = 24.4 bits (47), Expect(2) = 4e-028
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 389 GGERTRKQWNDLLQGAGFSISKIV 460
>gb|DR386464.1|DR386464 RTHG1_15_H04.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_15_H04_A029 3', mRNA sequence
Length = 805
Score = 120 bits (256), Expect(2) = 7e-028
Identities = 45/93 (48%), Positives = 65/93 (69%)
Frame = +2 / +3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I +A PH++ DL HV+A APT VQ + G++FES P
Sbjct: 87 FKDINTLVDVGGGRGEALSLIIEAHPHIRAINFDLPHVIATAPTLPGVQHMTGNLFESAP 266
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 267 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDK 365
Score = 24.9 bits (48), Expect(2) = 7e-028
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 471 GGERTRKQWNDLLQAAGFSISKIV 542
>gb|DR090448.1|DR090448 RTAL1_15_D01.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_15_D01_A029 3', mRNA sequence
Length = 721
Score = 120 bits (256), Expect(2) = 7e-028
Identities = 45/93 (48%), Positives = 65/93 (69%)
Frame = +2 / +1
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I +A PH++ DL HV+A APT VQ + G++FES P
Sbjct: 82 FKDINTLVDVGGGRGEALSLIIEAHPHIRAINFDLPHVIATAPTLPGVQHMTGNLFESAP 261
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 262 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDK 360
Score = 24.9 bits (48), Expect(2) = 7e-028
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 466 GGERTRKQWNDLLQAAGFSISKIV 537
>gb|CO167211.1|CO167211 FLD1_67_C10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_C10_A029 5', mRNA sequence
Length = 852
Score = 120 bits (256), Expect(2) = 1e-027
Identities = 45/93 (48%), Positives = 66/93 (70%)
Frame = +2 / +3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FE+ P
Sbjct: 237 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFENAP 416
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 417 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPEK 515
Score = 24.4 bits (47), Expect(2) = 1e-027
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 621 GGERTRKQWNDLLQGAGFSISKIV 692
>gb|CO167139.1|CO167139 FLD1_67_C10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_C10_A029 3', mRNA sequence
Length = 803
Score = 120 bits (256), Expect(2) = 1e-027
Identities = 45/93 (48%), Positives = 66/93 (70%)
Frame = +2 / +3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FE+ P
Sbjct: 210 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFENAP 389
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 390 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPEK 488
Score = 24.4 bits (47), Expect(2) = 1e-027
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 594 GGERTRKQWNDLLQGAGFSISKIV 665
>gb|DR742592.1|DR742592 RTCU1_5_F03.b2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_5_F03_A029 3', mRNA sequence
Length = 713
Score = 118 bits (253), Expect(2) = 2e-027
Identities = 45/90 (50%), Positives = 64/90 (71%)
Frame = +2 / +3
Query: 644 ISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPAD 823
I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FES P AD
Sbjct: 6 INTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAPSAD 185
Query: 824 AVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
A+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 186 AIFMKNFLHSWNDEDCIKLLNNCHQALPEK 275
Score = 24.9 bits (48), Expect(2) = 2e-027
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 381 GGERTRKQWNDLLQAAGFSISKIV 452
>gb|CF388135.1|CF388135 RTDR2_1_H07.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_H07_A021 3', mRNA
sequence
Length = 644
Score = 123 bits (264), Expect = 2e-027
Identities = 49/130 (37%), Positives = 83/130 (63%)
Frame = +2 / -2
Query: 524 IWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISK 703
++E ++ F+ + N+ +A+ ++ ++ K + F+ +++LVDVGGG+G+A I K
Sbjct: 643 LFEYLGNNPEFNKIFNEAMATSTRSVMASVAKMYEDGFKSMATLVDVGGGMGSALSIIVK 464
Query: 704 AFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKIL 883
PH++ LDL HV+A AP T V+ + G+MFE IP AD V++K +LHDW ++CVK+L
Sbjct: 463 EHPHIRGINLDLPHVIATAPLITGVEHMEGNMFEHIPSADTVMMKWILHDWADEECVKLL 284
Query: 884 KNCKKAIPPR 913
+ A P +
Sbjct: 283 RRSYDATPAK 254
>gb|DR118474.1|DR118474 RTMG1_17_F04.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_F04_A029 3', mRNA sequence
Length = 775
Score = 123 bits (263), Expect = 3e-027
Identities = 48/117 (41%), Positives = 78/117 (66%)
Frame = +2 / +3
Query: 563 LVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLA 742
+ N+ +A++++ ++ K + F+ +++LVDVGGG+G+A I K PH++ LDL
Sbjct: 33 IFNEAMATNTRSVMAFVAKMYEDGFKSVATLVDVGGGMGSALSIIVKEHPHIRGINLDLP 212
Query: 743 HVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
HV+A AP T V+ + G+MFE IP ADAV++K +LHDW ++CVK+L+ A P +
Sbjct: 213 HVIATAPPITGVEHMEGNMFEHIPSADAVMMKWILHDWPDEECVKLLRRSYDATPAK 383
>gb|CX714803.1|CX714803 RTPQ1_27_C08.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_27_C08_A032 3', mRNA sequence
Length = 718
Score = 117 bits (250), Expect(2) = 5e-027
Identities = 44/90 (48%), Positives = 63/90 (70%)
Frame = +2 / +3
Query: 644 ISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPAD 823
I++LVDVGGG G A I +A PH++ DL HV+A APT VQ + G++FES P AD
Sbjct: 9 INTLVDVGGGRGEALSLIIEAHPHIRAINFDLPHVIATAPTLPGVQHMTGNLFESAPSAD 188
Query: 824 AVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
A+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 189 AIFMKNFLHSWNDEDCIKLLNNCHQALPDK 278
Score = 24.9 bits (48), Expect(2) = 5e-027
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRII 1096
G ER ++W+ + AG+S +I+
Sbjct: 384 GGERTRKQWNDLLQAAGFSISKIV 455
>gb|DR015421.1|DR015421 STRS1_3_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_3_A05_A034 5', mRNA sequence
Length = 900
Score = 122 bits (260), Expect = 8e-027
Identities = 48/120 (40%), Positives = 78/120 (65%)
Frame = +2 / +2
Query: 554 FDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVL 733
F+ + N+ +A+ ++ ++ K + F+ +++LVDVGGG+G+A I K PH++ L
Sbjct: 8 FNKIFNEAMATSTRSVMASVAKMYEDGFKSMATLVDVGGGMGSALSIIVKEHPHIRGINL 187
Query: 734 DLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
DL HV+A AP T V+ + G+MFE IP AD V++K +LHDW ++CVK+L+ A P +
Sbjct: 188 DLPHVIATAPLITGVEHMEGNMFEHIPSADTVMMKWILHDWADEECVKLLRRSYDATPAK 367
>gb|CO175244.1|CO175244 NDL1_53_A11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_53_A11_A029 5', mRNA sequence
Length = 760
Score = 116 bits (248), Expect(2) = 9e-027
Identities = 45/100 (45%), Positives = 66/100 (66%)
Frame = +2 / +2
Query: 614 IKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAG 793
I S + F+ +++LVD+GGG G A I A+PH++ DL V+A APT VQ I+G
Sbjct: 287 ILASYDGFKDVNTLVDLGGGHGEALSLIIDAYPHIRAINFDLPQVIATAPTLPGVQHISG 466
Query: 794 DMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
+FE+ P ADA+ +K+ LH WD DC+K+L NC +A+P +
Sbjct: 467 SLFETAPSADAIFIKNFLHIWDDQDCIKLLSNCYQAVPDK 586
Score = 24.9 bits (48), Expect(2) = 9e-027
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 1025 GMERDEQEWSKIFSEAGYS 1081
G ER ++W+++ AG+S
Sbjct: 692 GRERTRKQWNELLKAAGFS 748
>gb|DR384933.1|DR384933 RTHG1_5_C09.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_5_C09_A029 5', mRNA sequence
Length = 789
Score = 121 bits (259), Expect = 1e-026
Identities = 46/93 (49%), Positives = 66/93 (70%)
Frame = +2 / +3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I+KA PH++ DL V+A APT VQ I+G++FES P
Sbjct: 411 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 590
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 591 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDK 689
>gb|CO170121.1|CO170121 NDL1_11_G04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_G04_A029 5', mRNA sequence
Length = 791
Score = 121 bits (258), Expect = 1e-026
Identities = 46/100 (46%), Positives = 64/100 (64%)
Frame = +2 / +2
Query: 614 IKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAG 793
I + E F+ + LVDVGGG+G+ I +PH+ D+ HVVA AP + V+ ++G
Sbjct: 44 ILDTYEGFKEVQELVDVGGGVGSTLNLIVSRYPHISAINFDIPHVVADAPHYPAVKHVSG 223
Query: 794 DMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
DMFES+P AV +K +LHDW D C K+LKNC KA+P +
Sbjct: 224 DMFESVPSGQAVFMKWILHDWSDDHCRKLLKNCHKALPEK 343
>gb|CO170118.1|CO170118 NDL1_11_F12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_F12_A029 5', mRNA sequence
Length = 800
Score = 120 bits (257), Expect = 2e-026
Identities = 47/110 (42%), Positives = 70/110 (63%)
Frame = +2 / +1
Query: 584 SDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAP 763
S++ ++ I + E F+ + LVDVGGGIG+ I +PH+ DL+HV+A AP
Sbjct: 172 SENSTMLMNKILDTYEGFKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAP 351
Query: 764 THTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
+ V+ +AGDMF+S+P A+ +K +LHDW D C K+LKNC KA+P +
Sbjct: 352 HYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKALPEK 501
>gb|DR060400.1|DR060400 RTNIT1_27_C10.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_C10_A029 5', mRNA sequence
Length = 740
Score = 120 bits (257), Expect = 2e-026
Identities = 47/110 (42%), Positives = 70/110 (63%)
Frame = +2 / +3
Query: 584 SDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAP 763
S++ ++ I + E F+ + LVDVGGGIG+ I +PH+ DL+HV+A AP
Sbjct: 171 SENSTMLMNKILDTYEGFKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAP 350
Query: 764 THTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
+ V+ +AGDMF+S+P A+ +K +LHDW D C K+LKNC KA+P +
Sbjct: 351 HYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKALPEK 500
>gb|DR094005.1|DR094005 STRR1_11_G04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_11_G04_A033 5', mRNA sequence
Length = 841
Score = 120 bits (257), Expect = 2e-026
Identities = 47/110 (42%), Positives = 70/110 (63%)
Frame = +2 / +3
Query: 584 SDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAP 763
S++ ++ I + E F+ + LVDVGGGIG+ I +PH+ DL+HV+A AP
Sbjct: 102 SENSTMLMNKILDTYEGFKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAP 281
Query: 764 THTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
+ V+ +AGDMF+S+P A+ +K +LHDW D C K+LKNC KA+P +
Sbjct: 282 HYPAVKHVAGDMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKALPEK 431
>gb|CO370451.1|CO370451 RTK1_68_A10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_A10_A029 3', mRNA sequence
Length = 824
Score = 95.9 bits (203), Expect(2) = 3e-026
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +2 / +3
Query: 695 ISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCV 874
I +A+P +K DL HVVA AP V+ + GDMFE++P ADA+ +K ++HDW +DC+
Sbjct: 6 IVRAYPSIKGINYDLPHVVATAPHLLGVEHMGGDMFETVPSADAIFMKWIMHDWGDEDCI 185
Query: 875 KILKNCKKAI 904
KILK C+KAI
Sbjct: 186 KILKRCRKAI 215
Score = 47.3 bits (97), Expect(2) = 3e-026
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 1135
G ER E+EW KI E G+ Y+II + +S+IE +P
Sbjct: 372 GKERTEEEWKKILLEGGFGRYKIITIPDFQSVIEAFP 482
>gb|DR020354.1|DR020354 STRS1_36_H04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_H04_A034 3', mRNA sequence
Length = 783
Score = 120 bits (256), Expect = 3e-026
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = +2 / +3
Query: 614 IKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAG 793
I + E F+ + LVDVGGGIG+ I +PH+ DL+HV+A AP + V+ +AG
Sbjct: 21 ILDTYEGFKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAPHYPAVKHVAG 200
Query: 794 DMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
DMF+S+P A+ +K +LHDW D C K+LKNC KA+P +
Sbjct: 201 DMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKALPEK 320
>gb|DR060317.1|DR060317 RTNIT1_27_C10.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_C10_A029 3', mRNA sequence
Length = 842
Score = 120 bits (256), Expect = 3e-026
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = +2 / +1
Query: 614 IKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAG 793
I + E F+ + LVDVGGGIG+ I +PH+ DL+HV+A AP + V+ +AG
Sbjct: 19 ILDTYEGFKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAPHYPAVKHVAG 198
Query: 794 DMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
DMF+S+P A+ +K +LHDW D C K+LKNC KA+P +
Sbjct: 199 DMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKALPEK 318
>gb|DR093928.1|DR093928 STRR1_11_G04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_11_G04_A033 3', mRNA sequence
Length = 789
Score = 120 bits (256), Expect = 3e-026
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = +2 / +3
Query: 614 IKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAG 793
I + E F+ + LVDVGGGIG+ I +PH+ DL+HV+A AP + V+ +AG
Sbjct: 27 ILDTYEGFKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAPHYPAVKHVAG 206
Query: 794 DMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
DMF+S+P A+ +K +LHDW D C K+LKNC KA+P +
Sbjct: 207 DMFDSVPSGQAIFMKWILHDWSDDHCRKLLKNCHKALPEK 326
>gb|DR386637.1|DR386637 RTHG1_16_B04.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_16_B04_A029 5', mRNA sequence
Length = 811
Score = 120 bits (256), Expect = 3e-026
Identities = 45/93 (48%), Positives = 65/93 (69%)
Frame = +2 / +3
Query: 635 FQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIP 814
F+ I++LVDVGGG G A I +A PH++ DL HV+A APT VQ + G++FES P
Sbjct: 507 FKDINTLVDVGGGRGEALSLIIEAHPHIRAINFDLPHVIATAPTLPGVQHMTGNLFESAP 686
Query: 815 PADAVLLKSVLHDWDHDDCVKILKNCKKAIPPR 913
ADA+ +K+ LH W+ +DC+K+L NC +A+P +
Sbjct: 687 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDK 785
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 766,172,068
Number of Sequences: 355925
Number of extensions: 12533640
Number of successful extensions: 71261
Number of sequences better than 1.0e-020: 102
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 21282318000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)