TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418861.2.2
(1617 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT636879.1|DT636879 EST1151810 Normalized pine embryo li... 457 e-127
gb|DR693591.1|DR693591 EST1083680 Normalized pine embryo li... 451 e-126
gb|DR691945.1|DR691945 EST1082032 Normalized pine embryo li... 438 e-122
gb|CX645971.1|CX645971 COLD1_6_A08.g1_A029 Root cold Pinus ... 396 e-109
gb|DT633502.1|DT633502 EST1148433 Normalized pine embryo li... 194 1e-092
gb|DR686435.1|DR686435 EST1076513 Normalized pine embryo li... 331 9e-090
gb|DR118894.1|DR118894 RTMG1_19_G09.g1_A029 Roots minus mag... 292 6e-079
gb|DR098181.1|DR098181 STRR1_39_D08.g1_A033 Stem Response R... 292 5e-078
gb|DN461652.1|DN461652 EST957451 Sequencing ESTs from loblo... 256 3e-077
gb|DN460009.1|DN460009 EST955808 Sequencing ESTs from loblo... 254 1e-066
gb|CF387574.1|CF387574 RTDR1_20_C08.g1_A015 Loblolly pine r... 208 4e-062
gb|CF672887.1|CF672887 RTCNT1_74_D06.g1_A029 Root control P... 149 8e-062
gb|DR088681.1|DR088681 RTAL1_3_F02.g1_A029 Roots plus added... 165 7e-061
gb|DN464524.1|DN464524 EST960323 Sequencing ESTs from loblo... 234 1e-060
gb|CF479172.1|CF479172 RTWW3_24_C04.g1_A022 Well-watered lo... 233 3e-060
gb|DR168008.1|DR168008 RTPHOS1_22_C11.g1_A029 Roots minus p... 233 3e-060
gb|BX253610.1|BX253610 BX253610 Pinus pinaster differenciat... 230 3e-059
dbj|BD273093.1| Materials and methods for the modification ... 225 6e-058
gb|DR742673.1|DR742673 RTCU1_5_F04.g2_A029 Roots plus added... 214 1e-054
gb|CV033059.1|CV033059 RTNACL1_20_B02.b1_A029 Roots plus ad... 210 2e-053
gb|DR098107.1|DR098107 STRR1_39_D08.b1_A033 Stem Response R... 210 2e-053
gb|CF388646.1|CF388646 RTDR2_4_H02.g1_A021 Loblolly pine ro... 209 4e-053
gb|CX713935.1|CX713935 RTPQ1_15_D05.b1_A032 Roots treated w... 200 2e-050
gb|DR015808.1|DR015808 STRS1_5_F05.g1_A034 Shoot tip pitch ... 166 2e-049
gb|BX679115.1|BX679115 BX679115 RS Pinus pinaster cDNA clon... 197 2e-049
gb|CO409454.1|CO409454 EST839839 Sequencing ESTs from loblo... 160 2e-048
gb|DN446266.1|DN446266 EST942065 Sequencing ESTs from loblo... 160 2e-048
gb|DT625515.1|DT625515 EST1157439 Sequencing ESTs from lobl... 160 2e-048
gb|CO409265.1|CO409265 EST839650 Sequencing ESTs from loblo... 160 2e-048
gb|DT624374.1|DT624374 EST1158649 Sequencing ESTs from lobl... 160 2e-048
gb|CO370524.1|CO370524 RTK1_68_A09.g1_A029 Roots minus pota... 157 7e-047
gb|CO198411.1|CO198411 GEO1_13_B02.g1_A029 Root gravitropis... 161 2e-045
gb|CF387231.1|CF387231 RTDR1_11_H11.g1_A015 Loblolly pine r... 146 4e-044
gb|DR014856.1|DR014856 HEAT1_52_B11.b1_A029 Root at 37 C fo... 170 3e-041
gb|BQ698117.1|BQ698117 NXPV_064_G03_F NXPV (Nsf Xylem Plani... 167 2e-040
gb|CO370450.1|CO370450 RTK1_68_A09.b1_A029 Roots minus pota... 132 2e-040
gb|BQ700092.1|BQ700092 NXRV101_B03_F NXRV (Nsf Xylem Root w... 132 5e-040
gb|DR167938.1|DR167938 RTPHOS1_22_C11.b1_A029 Roots minus p... 119 2e-037
gb|CF672817.1|CF672817 RTCNT1_74_D06.b1_A029 Root control P... 110 6e-036
gb|BQ701207.1|BQ701207 NXSI_023_G09_F NXSI (Nsf Xylem Side ... 142 8e-033
gb|AW697967.1|AW697967 NXNV_072_H04_F Nsf Xylem Normal wood... 131 2e-029
gb|DR101369.1|DR101369 STRR1_72_A04.g1_A033 Stem Response R... 127 3e-028
gb|BQ700488.1|BQ700488 NXRV107_C11_F NXRV (Nsf Xylem Root w... 100 1e-027
gb|BQ699178.1|BQ699178 NXRV120_E03_F NXRV (Nsf Xylem Root w... 120 3e-026
gb|BX253022.1|BX253022 BX253022 Pinus pinaster differenciat... 119 5e-026
gb|CO198340.1|CO198340 GEO1_13_B02.b1_A029 Root gravitropis... 68 2e-024
gb|BM428313.1|BM428313 NXRV_012_C08_F NXRV (Nsf Xylem Root ... 113 4e-024
gb|DR097838.1|DR097838 STRR1_37_H07.b1_A033 Stem Response R... 111 1e-023
gb|BQ700171.1|BQ700171 NXRV102_B01_F NXRV (Nsf Xylem Root w... 103 3e-021
>gb|DT636879.1|DT636879 EST1151810 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGX11 3' end, mRNA sequence
Length = 829
Score = 457 bits (992), Expect = e-127
Identities = 180/251 (71%), Positives = 207/251 (82%)
Frame = -3 / +2
Query: 1363 INKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 1184
I K ++ +AV+ +RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW
Sbjct: 44 IEKEQMLTAVEEYEKYHMYYGGDEGSRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 223
Query: 1183 NGESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQI 1004
GE+LRESIKRHEHFLALQL LKP MKVLDVGCGIGGPLREIARFS TS+TGLNNN YQI
Sbjct: 224 KGETLRESIKRHEHFLALQLCLKPAMKVLDVGCGIGGPLREIARFSRTSITGLNNNAYQI 403
Query: 1003 TRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLK 824
+RGKELNR G+ +CDFVK DFMKMPF ++TFDAVY IEATCHAPD VGCYKEI RVLK
Sbjct: 404 SRGKELNRECGLDKSCDFVKGDFMKMPFSNDTFDAVYTIEATCHAPDAVGCYKEIKRVLK 583
Query: 823 PGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDK 644
PGQ FA YEWC+TD +DP N H++IK EIELG+GLPDIR+T QC++A+K AGFEV++++
Sbjct: 584 PGQLFAAYEWCMTDSFDPKNEEHQKIKAEIELGDGLPDIRTTNQCIEALKSAGFEVLFEE 763
Query: 643 DLAEDSPLPWY 611
+L S +PWY
Sbjct: 764 NLTVSSTVPWY 796
Score = 269 bits (582), Expect(3) = 1e-077
Identities = 126/168 (75%), Positives = 134/168 (79%)
Frame = +3 / -2
Query: 783 SVMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHV 962
SVMHHSY A WPGF+T +ISL*QPT SGA* VAS+ *TASKV GIFMKS LTKS +
Sbjct: 624 SVMHHSYAANSWPGFSTLFISL*QPTASGA*QVASIV*TASKVSLEKGIFMKSPLTKSQL 445
Query: 963 PLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARK 1142
P LSSFPL I Y+LLFNPV EV LNLAISLSGPPIP PTS TFI GFK S RARK
Sbjct: 444 LSSPHSLLSSFPLDI*YALLFNPVMEVRLNLAISLSGPPIPHPTSNTFIAGFKQS*RARK 265
Query: 1143 CSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 1286
CS R +LSR+ SPFHL*AK KDSP PYS*KLVARS*YL T+SV*LDFL
Sbjct: 264 CSWRFILSRRVSPFHL*AK*KDSPHPYS*KLVARS*YLFTMSV*LDFL 121
Score = 212 bits (457), Expect = 6e-054
Identities = 112/274 (40%), Positives = 160/274 (58%)
Frame = +2 / -1
Query: 578 TQGESAWIQGQVPRQGRIFSKILIPNNLKPGVFYCLETLPSASDIWQAIAKLNFILDPFV 757
TQ E I+ +PR K+L +LK F TL ++++ + I+K NF L+ V
Sbjct: 829 TQREMTCIKWIIPRNC**DCKVLFKEHLKSSRFKSFNTLVCSTNVRKPISKFNFCLNLLV 650
Query: 758 GCIVRIIVIRNAPLVHGKALARLQHTIYLLVATNWIRCMTCCLNGVNSIKSVVIERHLHE 937
I+ + + +AP + K LAR Q++ YL VA N I CMT LN +N IKS+V ERHLHE
Sbjct: 649 LFILWVKRVSHAPFICRKQLARFQYSFYLFVAANCIWCMTGSLNCINCIKSIVGERHLHE 470
Query: 938 VRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWF 1117
V LDKIT V+L S YL+ ++IQS + S + NFSQW++ T++I LH
Sbjct: 469 VSLDKITAFV*PTFPVKLFSS*YLICIIIQSCDGSPTEPSNFSQWTSNPTSNIQYLHCRL 290
Query: 1118 QTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLL 1297
TKL+ KKM M+L F+ G PSVSK++ P+ILIE S +IIVFI H+ IV +
Sbjct: 289 *TKLKSKKMFMALYTFSEGLPFPSVSKMKRLPPSILIETSRQIIVFIYHVCIVRFSRAFI 110
Query: 1298 PSIVSMIFLILIDGRLDFHLVDLPSEARSKIQRS 1399
+IV +IF +L + +++ S + +IQRS
Sbjct: 109 TTIVHVIFFVLFNSGQHLFFLNVASHS*GQIQRS 8
Score = 103 bits (220), Expect(2) = 7e-029
Identities = 66/145 (45%), Positives = 73/145 (50%)
Frame = +1 / -3
Query: 721 HCQAQFHP*SFCGLHC*DHSDP*CTTRTRQSTGQASTHDISPCSNQLDQVHDMLPQWRKQ 900
H Q QF P*S LH CT Q+ GQ S +S CS+QL VHD PQ K
Sbjct: 686 HLQVQFLP*SSGALHSLGQKSQSCTIHMPQTVGQVSVLFLSLCSSQLHLVHDR*PQLYKL 507
Query: 901 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 1080
HQK R ASS*S P*QNH F + *A F +S + YSI * K * QFLSV
Sbjct: 506 HQKYRWRKASS*SLP*QNHSFCLAHIPC*ALFLLISDMHYYSIL*WKSD*T*QFLSVDLQ 327
Query: 1081 FHSPHLKPSFLVSNQVAGQENAHVA 1155
H H PS N+ QEN H A
Sbjct: 326 SHIQHPIPSLQALNKAEEQENVHGA 252
Score = 75.8 bits (159), Expect(2) = 2e-027
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -2 / +1
Query: 959 M*FCQGGLHEDAVR*QHF*CCLRH*GNMSCT*SSWLLQGDISCVEAWPVLCRVRVVH 789
+*FCQG LHEDA ++F*C L +*G +SCT SWLLQ D E WP +C + +VH
Sbjct: 448 L*FCQGRLHEDAFLQRYF*CSLYN*GYLSCTRCSWLLQRDKKSTETWPTVCGI*MVH 618
Score = 68.4 bits (143), Expect(2) = 2e-027
Identities = 48/116 (41%), Positives = 60/116 (51%)
Frame = -1 / +3
Query: 1329 SMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKASSD 1150
S +NI TM + + + TI W INTMI L SMSM G + LLTDG P K S
Sbjct: 78 STKNITCTMVVMKARENLTIQTW*INTMIWRLVSMSMDGGSLFILLTDGKGRPSEKV*SA 257
Query: 1149 MSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXLPD*ITTNTR*PGERSST 982
M+IFL + V*+ +*R+ M V H*EK D*I + R E+S T
Sbjct: 258 MNIFLLFSFV*SLQ*RYWMLDVGLEVH*EKLLGSVGLPSQD*IIMHIRYQEEKSLT 425
Score = 45.1 bits (92), Expect(2) = 7e-029
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1 / -3
Query: 1183 SICEQSGRIHPNHTHRS*WQDHSIY*PYQYS 1275
SICEQ+ + P HTHR+* DHSIY P YS
Sbjct: 224 SICEQNEKTPPIHTHRN*SPDHSIYLPCLYS 132
Score = 35.4 bits (71), Expect(3) = 1e-077
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3 / -2
Query: 579 LRENRLGSKGKYQGKGESSARSLSQTTSNPASFTAWRH 692
LRE L S G Y G + + R S++TSNPA A H
Sbjct: 828 LREK*LVSSGSYHGTVDETVRFSSKSTSNPADLRASIH 715
Score = 25.8 bits (50), Expect(3) = 1e-077
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3 / -2
Query: 1335 TADLTSTLLIFPPRPEARSSAP 1400
TA + + PP PEARS+AP
Sbjct: 72 TAVSICSFSMLPPIPEARSNAP 7
>gb|DR693591.1|DR693591 EST1083680 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE147 3' end, mRNA sequence
Length = 733
Score = 451 bits (980), Expect = e-126
Identities = 175/226 (77%), Positives = 198/226 (87%)
Frame = -3 / +1
Query: 1288 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 1109
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW GE+LRESIKRHEHFLAL L LKP
Sbjct: 52 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWKGETLRESIKRHEHFLALHLCLKPA 231
Query: 1108 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 929
MKVLDVGCGIGGPLREIARFS TS+TGLNNN YQI+RG+ELNR G+ +CDFV DFMK
Sbjct: 232 MKVLDVGCGIGGPLREIARFSRTSITGLNNNAYQISRGRELNRECGLDKSCDFVMGDFMK 411
Query: 928 MPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKR 749
MPF ++TFDAVYAIEATCHAPD VGCYKEI RVLKPGQ FA YEWC+TD +DP N H+R
Sbjct: 412 MPFSNDTFDAVYAIEATCHAPDAVGCYKEIKRVLKPGQLFAAYEWCMTDSFDPKNEEHQR 591
Query: 748 IKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWY 611
IK EIELG+GLPDIR+T QC++A+K AGFEV+++++L S +PWY
Sbjct: 592 IKAEIELGDGLPDIRTTNQCIEALKSAGFEVLFEENLTVSSTVPWY 729
Score = 264 bits (571), Expect(2) = 4e-071
Identities = 124/168 (73%), Positives = 132/168 (78%)
Frame = +3 / -3
Query: 783 SVMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHV 962
SVMHHSY A WPGF+T +ISL*QPT SGA* VAS+A*TASKV GIFMKS +TKS +
Sbjct: 557 SVMHHSYAANSWPGFSTLFISL*QPTASGA*QVASIA*TASKVSLEKGIFMKSPMTKSQL 378
Query: 963 PLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARK 1142
P LSS PL I Y+LLFNPV EV LNLAISLSGPPIP PTS TFI GFK RARK
Sbjct: 377 LSSPHSLLSSLPLDI*YALLFNPVIEVRLNLAISLSGPPIPHPTSNTFIAGFKQR*RARK 198
Query: 1143 CSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 1286
CS R +LSR SPFHL*AK KDSP PYS*KLVARS*YL T+SV*LDFL
Sbjct: 197 CSWRFILSRSVSPFHL*AK*KDSPHPYS*KLVARS*YLFTMSV*LDFL 54
Score = 195 bits (421), Expect = 6e-049
Identities = 99/233 (42%), Positives = 141/233 (60%)
Frame = +2 / -2
Query: 638 KILIPNNLKPGVFYCLETLPSASDIWQAIAKLNFILDPFVGCIVRIIVIRNAPLVHGKAL 817
K+L +LK F TL ++++ + I+K NF L+P V I+ + + +AP + K L
Sbjct: 702 KVLFKEHLKSSRFKSFNTLVCSTNVRKPISKFNFCLNPLVLFILWVKRVSHAPFICRKQL 523
Query: 818 ARLQHTIYLLVATNWIRCMTCCLNGVNSIKSVVIERHLHEVRLDKITCSTNSC*TVELLS 997
AR Q++ YL VA N I CMT LN +N IKS+V ERHLHEV DKIT V+L S
Sbjct: 522 ARFQYSFYLFVAANCIWCMTGSLNCINCIKSIVGERHLHEVSHDKITAFV*PTFPVKLSS 343
Query: 998 PGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GF 1177
YL+ ++IQS + S + NFSQW++ T++I LH TK++ KKM M+L F+
Sbjct: 342 S*YLICIIIQSCDRSPTEPSNFSQWTSNPTSNIQYLHCRL*TKVKSKKMFMALYTFSERL 163
Query: 1178 SIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSMIFLILID 1336
PSVSK++ P+ILIE S +IIVFI H+ IV + +IV +IF +L +
Sbjct: 162 PFPSVSKMKRLPPSILIETSRQIIVFIYHVCIVRFSRAFITTIVHVIFFVLFN 4
Score = 138 bits (296), Expect = 1e-031
Identities = 86/185 (46%), Positives = 96/185 (51%)
Frame = +1 / -1
Query: 721 HCQAQFHP*SFCGLHC*DHSDP*CTTRTRQSTGQASTHDISPCSNQLDQVHDMLPQWRKQ 900
H Q QF P*S LH CT Q+ GQ S +S CS+QL VHD PQ K
Sbjct: 619 HLQVQFLP*SSGALHSLGQKSQSCTIHMPQTVGQVSVLFLSLCSSQLHLVHDR*PQLHKL 440
Query: 901 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 1080
HQK R ASS*S P*QNH F + *A F +S + YSI * K * QFLSV
Sbjct: 439 HQKYRWRKASS*SLP*QNHSFCLAHIPC*ALFLLISDMHYYSIL*SKSD*T*QFLSVDLQ 260
Query: 1081 FHSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY* 1260
H H PS N+ QEN H A F SICEQ+ + P HTHR+* DHSIY
Sbjct: 259 SHIQHPIPSLQALNKGEEQENVHGALYFLGASPLSICEQNEKTPPIHTHRN*SPDHSIYL 80
Query: 1261 PYQYS 1275
P YS
Sbjct: 79 PCLYS 65
Score = 73.0 bits (153), Expect(2) = 3e-025
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -2 / +3
Query: 959 M*FCQGGLHEDAVR*QHF*CCLRH*GNMSCT*SSWLLQGDISCVEAWPVLCRVRVVH 789
+*FC G LHEDA ++F*C L +*G +SCT SWLLQ D E WP +C + +VH
Sbjct: 381 L*FCHGRLHEDAFLQRYF*CSLCN*GYLSCTRCSWLLQRDKKSTETWPTVCGI*MVH 551
Score = 63.4 bits (132), Expect(2) = 3e-025
Identities = 47/116 (40%), Positives = 57/116 (49%)
Frame = -1 / +2
Query: 1329 SMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKASSD 1150
S +NI TM + + + TI W INTMI L SMSM G + LLTDG K S
Sbjct: 11 STKNITCTMVVMKARENLTIQTW*INTMIWRLVSMSMDGGSLFILLTDGKGRRSEKV*SA 190
Query: 1149 MSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXLPD*ITTNTR*PGERSST 982
M+IFL V*+ +*R+ M V H*EK D*I + R E S T
Sbjct: 191 MNIFLLFTFV*SLQ*RYWMLDVGLEVH*EKLLGSVGLRSQD*IIMHIRYQEEESLT 358
Score = 25.8 bits (50), Expect(2) = 4e-071
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / -3
Query: 612 YQGKGESSARSLSQTTSNPASFTAWRH 692
Y G + + R S++TSNPA A H
Sbjct: 728 YHGTVDETVRFSSKSTSNPADLRASIH 648
>gb|DR691945.1|DR691945 EST1082032 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADG12 3' end, mRNA sequence
Length = 832
Score = 438 bits (951), Expect = e-122
Identities = 174/235 (74%), Positives = 195/235 (82%)
Frame = -3 / +3
Query: 1363 INKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 1184
I K ++ +AV+ +RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW
Sbjct: 36 IEKEQMLTAVEEYEKYHMYYGGDEGSRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 215
Query: 1183 NGESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQI 1004
GE+LRESIKRHEHFLALQL LKP MKVLDVGCGIGGPLREIARFS TS+TGLNNN YQI
Sbjct: 216 KGETLRESIKRHEHFLALQLCLKPAMKVLDVGCGIGGPLREIARFSRTSITGLNNNAYQI 395
Query: 1003 TRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLK 824
+RGKELNR G+ +CDFVK DFMKMPF ++TFDAVY IEATCHAPD VGCYKEI RVLK
Sbjct: 396 SRGKELNRECGLDKSCDFVKGDFMKMPFSNDTFDAVYTIEATCHAPDAVGCYKEIKRVLK 575
Query: 823 PGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFE 659
PGQ FA YEWC+TD +DP N H++IK EIELG+GLPDIR+T QC++A+K AGFE
Sbjct: 576 PGQLFAAYEWCMTDSFDPKNEEHQKIKAEIELGDGLPDIRTTNQCIEALKSAGFE 740
Score = 269 bits (582), Expect(2) = 1e-071
Identities = 126/168 (75%), Positives = 134/168 (79%)
Frame = +3 / -1
Query: 783 SVMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHV 962
SVMHHSY A WPGF+T +ISL*QPT SGA* VAS+ *TASKV GIFMKS LTKS +
Sbjct: 616 SVMHHSYAANSWPGFSTLFISL*QPTASGA*QVASIV*TASKVSLEKGIFMKSPLTKSQL 437
Query: 963 PLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARK 1142
P LSSFPL I Y+LLFNPV EV LNLAISLSGPPIP PTS TFI GFK S RARK
Sbjct: 436 LSSPHSLLSSFPLDI*YALLFNPVMEVRLNLAISLSGPPIPHPTSNTFIAGFKQS*RARK 257
Query: 1143 CSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 1286
CS R +LSR+ SPFHL*AK KDSP PYS*KLVARS*YL T+SV*LDFL
Sbjct: 256 CSWRFILSRRVSPFHL*AK*KDSPHPYS*KLVARS*YLFTMSV*LDFL 113
Score = 200 bits (431), Expect = 2e-050
Identities = 103/246 (41%), Positives = 147/246 (59%)
Frame = +2 / -3
Query: 659 LKPGVFYCLETLPSASDIWQAIAKLNFILDPFVGCIVRIIVIRNAPLVHGKALARLQHTI 838
LK F TL ++++ + I+K NF L+ V I+ + + +AP + K LAR Q++
Sbjct: 740 LKSSRFKSFNTLVCSTNVRKPISKFNFCLNLLVLFILWVKRVSHAPFICRKQLARFQYSF 561
Query: 839 YLLVATNWIRCMTCCLNGVNSIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFV 1018
YL VA N I CMT LN +N IKS+V ERHLHEV LDKIT V+L S YL+ +
Sbjct: 560 YLFVAANCIWCMTGSLNCINCIKSIVGERHLHEVSLDKITAFV*PTFPVKLFSS*YLICI 381
Query: 1019 VIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSK 1198
+IQS + S + NFSQW++ T++I LH TKL+ KKM M+L F+ G PSVSK
Sbjct: 380 IIQSCDGSPTEPSNFSQWTSNPTSNIQYLHCRL*TKLKSKKMFMALYTFSEGLPFPSVSK 201
Query: 1199 VEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSMIFLILIDGRLDFHLVDLPSEA 1378
++ P+ILIE S +IIVFI H+ IV + +IV +IF +L + +++ S +
Sbjct: 200 MKRLPPSILIETSRQIIVFIYHVCIVRFSRAFITTIVHVIFFVLFNSGQHLFFLNVASHS 21
Query: 1379 RSKIQR 1396
+IQR
Sbjct: 20 *GQIQR 3
Score = 103 bits (220), Expect(2) = 7e-029
Identities = 66/145 (45%), Positives = 73/145 (50%)
Frame = +1 / -2
Query: 721 HCQAQFHP*SFCGLHC*DHSDP*CTTRTRQSTGQASTHDISPCSNQLDQVHDMLPQWRKQ 900
H Q QF P*S LH CT Q+ GQ S +S CS+QL VHD PQ K
Sbjct: 678 HLQVQFLP*SSGALHSLGQKSQSCTIHMPQTVGQVSVLFLSLCSSQLHLVHDR*PQLYKL 499
Query: 901 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 1080
HQK R ASS*S P*QNH F + *A F +S + YSI * K * QFLSV
Sbjct: 498 HQKYRWRKASS*SLP*QNHSFCLAHIPC*ALFLLISDMHYYSIL*WKSD*T*QFLSVDLQ 319
Query: 1081 FHSPHLKPSFLVSNQVAGQENAHVA 1155
H H PS N+ QEN H A
Sbjct: 318 SHIQHPIPSLQALNKAEEQENVHGA 244
Score = 75.8 bits (159), Expect(2) = 2e-027
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -2 / +2
Query: 959 M*FCQGGLHEDAVR*QHF*CCLRH*GNMSCT*SSWLLQGDISCVEAWPVLCRVRVVH 789
+*FCQG LHEDA ++F*C L +*G +SCT SWLLQ D E WP +C + +VH
Sbjct: 440 L*FCQGRLHEDAFLQRYF*CSLYN*GYLSCTRCSWLLQRDKKSTETWPTVCGI*MVH 610
Score = 68.4 bits (143), Expect(2) = 2e-027
Identities = 48/116 (41%), Positives = 60/116 (51%)
Frame = -1 / +1
Query: 1329 SMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKASSD 1150
S +NI TM + + + TI W INTMI L SMSM G + LLTDG P K S
Sbjct: 70 STKNITCTMVVMKARENLTIQTW*INTMIWRLVSMSMDGGSLFILLTDGKGRPSEKV*SA 249
Query: 1149 MSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXLPD*ITTNTR*PGERSST 982
M+IFL + V*+ +*R+ M V H*EK D*I + R E+S T
Sbjct: 250 MNIFLLFSFV*SLQ*RYWMLDVGLEVH*EKLLGSVGLPSQD*IIMHIRYQEEKSLT 417
Score = 45.1 bits (92), Expect(2) = 7e-029
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1 / -2
Query: 1183 SICEQSGRIHPNHTHRS*WQDHSIY*PYQYS 1275
SICEQ+ + P HTHR+* DHSIY P YS
Sbjct: 216 SICEQNEKTPPIHTHRN*SPDHSIYLPCLYS 124
Score = 22.6 bits (43), Expect(2) = 1e-071
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3 / -1
Query: 1335 TADLTSTLLIFPPRPEARSSA 1397
TA + + PP PEARS+A
Sbjct: 64 TAVSICSFSMLPPIPEARSNA 2
>gb|CX645971.1|CX645971 COLD1_6_A08.g1_A029 Root cold Pinus taeda cDNA clone COLD1_6_A08_A029
5', mRNA sequence
Length = 691
Score = 396 bits (859), Expect = e-109
Identities = 158/230 (68%), Positives = 187/230 (81%)
Frame = -3 / +2
Query: 1156 KRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRL 977
KRHEHFLALQL LKP MKVLDVGCGIGGPLREIARFS TS+TGLNNN YQI+RGKELNR
Sbjct: 2 KRHEHFLALQLCLKPAMKVLDVGCGIGGPLREIARFSRTSITGLNNNAYQISRGKELNRE 181
Query: 976 AGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYE 797
G+ +CDFVK DFMKMPF ++TFDAVYAIEATCHAPD VGCYKEI RVLKPGQ FA YE
Sbjct: 182 CGLDKSCDFVKGDFMKMPFSNDTFDAVYAIEATCHAPDAVGCYKEIKRVLKPGQLFAAYE 361
Query: 796 WCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLP 617
WC+TD +DP N H++IK EIELG+GLPDIR+T QC++A+K AGFEV+++++L S +P
Sbjct: 362 WCMTDSFDPKNEEHQKIKAEIELGDGLPDIRTTNQCIEALKSAGFEVLFEENLTVSSTVP 541
Query: 616 WYXXXXXXXXXXXXXXLTSVGRMITRTMVKALEYVGLAPQGSERVSNFLE 467
WY LT++GR +TR MV+ LE++ LAP+GSERVS+FLE
Sbjct: 542 WYDPLDTSHFSLSSFRLTAIGRFLTRNMVRMLEFLRLAPEGSERVSSFLE 691
Score = 197 bits (424), Expect(2) = 9e-064
Identities = 91/124 (73%), Positives = 96/124 (77%)
Frame = +3 / -2
Query: 783 SVMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHV 962
SVMHHSY A WPGF+T +ISL*QPT SGA* VAS+A*TASKV GIFMKS LTKS +
Sbjct: 375 SVMHHSYAANSWPGFSTLFISL*QPTASGA*QVASIA*TASKVSLEKGIFMKSPLTKSQL 196
Query: 963 PLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARK 1142
P LSSFPL I Y+LLFNPV EV LNLAISLSGPPIP PTS TFI GFK S RARK
Sbjct: 195 LSSPHSLLSSFPLDI*YALLFNPVMEVRLNLAISLSGPPIPHPTSNTFIAGFKQS*RARK 16
Query: 1143 CSCR 1154
CS R
Sbjct: 15 CSWR 4
Score = 162 bits (348), Expect = 7e-039
Identities = 90/230 (39%), Positives = 129/230 (56%)
Frame = +2 / -1
Query: 467 LQEIRDPLTALRSKTNVLQGLDHCAGNHASHRGQTEATQGESAWIQGQVPRQGRIFSKIL 646
LQ+ P TA Q +H + A++ +T+ TQ E I+ +PR K+L
Sbjct: 691 LQK*GYPFTAFWC*PQEFQHSNHISCQKATNGCETKTTQREMTCIKWIIPRNC**DCKVL 512
Query: 647 IPNNLKPGVFYCLETLPSASDIWQAIAKLNFILDPFVGCIVRIIVIRNAPLVHGKALARL 826
+LK F TL ++++ + I+K NF L+ V I+ + + +AP + K LAR
Sbjct: 511 FKEHLKSSRFKSFNTLVCSTNVRKPISKFNFCLNLLVLFILWVKRVSHAPFICRKQLARF 332
Query: 827 QHTIYLLVATNWIRCMTCCLNGVNSIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGY 1006
Q++ YL VA N I CMT LN +N IKS+V ERHLHEV LDKIT V+L S Y
Sbjct: 331 QYSFYLFVAANCIWCMTGSLNCINCIKSIVGERHLHEVSLDKITAFV*PTFPVKLFSS*Y 152
Query: 1007 LVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQGKKMLMSL 1156
L+ ++IQS + S + NFSQW++ T++I LH TKL+ KKM M+L
Sbjct: 151 LICIIIQSCDGSPTEPSNFSQWTSNPTSNIQYLHCRL*TKLKSKKMFMAL 2
Score = 104 bits (222), Expect = 2e-021
Identities = 66/145 (45%), Positives = 73/145 (50%)
Frame = +1 / -3
Query: 721 HCQAQFHP*SFCGLHC*DHSDP*CTTRTRQSTGQASTHDISPCSNQLDQVHDMLPQWRKQ 900
H Q QF P*S LH CT Q+ GQ S +S CS+QL VHD PQ K
Sbjct: 437 HLQVQFLP*SSGALHSLGQKSQSCTIHMPQTVGQVSVLFLSLCSSQLHLVHDR*PQLHKL 258
Query: 901 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 1080
HQK R ASS*S P*QNH F + *A F +S + YSI * K * QFLSV
Sbjct: 257 HQKYRWRKASS*SLP*QNHSFCLAHIPC*ALFLLISDMHYYSIL*WKSD*T*QFLSVDLQ 78
Query: 1081 FHSPHLKPSFLVSNQVAGQENAHVA 1155
H H PS N+ QEN H A
Sbjct: 77 SHIQHPIPSLQALNKAEEQENVHGA 3
Score = 75.3 bits (158), Expect(2) = 1e-022
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -2 / +1
Query: 959 M*FCQGGLHEDAVR*QHF*CCLRH*GNMSCT*SSWLLQGDISCVEAWPVLCRVRVVH 789
+*FCQG LHEDA ++F*C L +*G +SCT SWLLQ D E WP +C + +VH
Sbjct: 199 L*FCQGRLHEDAFLQRYF*CSLCN*GYLSCTRCSWLLQRDKKSTETWPTVCGI*MVH 369
Score = 68.4 bits (143), Expect(2) = 9e-064
Identities = 35/71 (49%), Positives = 41/71 (57%)
Frame = +3 / -2
Query: 480 ETLSLPCGARPTYSRALTIVRVIMRPTEVKRKLLRENRLGSKGKYQGKGESSARSLSQTT 659
+TLSLP GA S LTI V RP V+RKLLRE L S G Y G + + R S++T
Sbjct: 678 DTLSLPSGANLRNSNILTIFLVKKRPMAVRRKLLREK*LVSSGSYHGTVDETVRFSSKST 499
Query: 660 SNPASFTAWRH 692
SNPA A H
Sbjct: 498 SNPADLRASIH 466
Score = 52.4 bits (108), Expect(2) = 1e-022
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = -2 / +1
Query: 1157 QAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*QRIPDNQGKGA 987
+A * FSC + F+ NEG C +W+ +TERNC + +F +RIE* I D + K A
Sbjct: 1 KAP*TFSCSSALFKACNEGIGCWMWDWRSTERNC*VQSDFHHRIE**CISDIKRKRA 171
>gb|DT633502.1|DT633502 EST1148433 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFV57 3' end, mRNA sequence
Length = 857
Score = 194 bits (418), Expect(2) = 1e-092
Identities = 78/96 (81%), Positives = 84/96 (87%)
Frame = -3 / +3
Query: 1084 GIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTF 905
GIGGPLREIARFS TS+TGLNNN YQI+RGKELNR G+ +CDFVK DFMKMPF ++TF
Sbjct: 570 GIGGPLREIARFSWTSITGLNNNAYQISRGKELNRECGLDKSCDFVKGDFMKMPFSNDTF 749
Query: 904 DAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYE 797
DAVYAIEATCHAPD VGCYKEI RVLKPGQ FA YE
Sbjct: 750 DAVYAIEATCHAPDAVGCYKEIKRVLKPGQLFAAYE 857
Score = 167 bits (360), Expect(2) = 1e-092
Identities = 68/94 (72%), Positives = 74/94 (78%)
Frame = -3 / +2
Query: 1363 INKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 1184
I K ++ +AV+ +RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW
Sbjct: 290 IEKEQMLTAVEEYEKYHMYYGGDEGSRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 469
Query: 1183 NGESLRESIKRHEHFLALQLGLKPGMKVLDVGCG 1082
GE+LRESIKRHEHFLALQL LKP MKVLDVGCG
Sbjct: 470 RGETLRESIKRHEHFLALQLCLKPAMKVLDVGCG 571
Score = 147 bits (316), Expect(3) = 7e-065
Identities = 69/96 (71%), Positives = 75/96 (78%)
Frame = +3 / -2
Query: 798 SYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHVPLIPA 977
SY A WPGF+T +ISL*QPT SGA* VAS+A*TASKV GIFMKS LTKS + P
Sbjct: 856 SYAANSWPGFSTLFISL*QPTASGA*QVASIA*TASKVSLEKGIFMKSPLTKSQLLSSPH 677
Query: 978 KRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIP 1085
LSSFPL I Y+LLFNPV EV+LNLAISLSGPPIP
Sbjct: 676 SLLSSFPLDI*YALLFNPVMEVQLNLAISLSGPPIP 569
Score = 114 bits (244), Expect(3) = 7e-065
Identities = 53/68 (77%), Positives = 56/68 (82%)
Frame = +3 / -3
Query: 1083 PQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLT 1262
P PTS TFI GFK S RARKCS R +LSR+ SP HL*AK KDSP PYS*KLVARS*YL T
Sbjct: 570 PHPTSNTFIAGFKQS*RARKCSWRFILSRRVSPLHL*AK*KDSPHPYS*KLVARS*YLFT 391
Query: 1263 ISV*LDFL 1286
+SV*LDFL
Sbjct: 390 MSV*LDFL 367
Score = 96.8 bits (205), Expect(2) = 2e-038
Identities = 46/90 (51%), Positives = 58/90 (64%)
Frame = +2 / -1
Query: 809 KALARLQHTIYLLVATNWIRCMTCCLNGVNSIKSVVIERHLHEVRLDKITCSTNSC*TVE 988
K LAR Q++ YL VA N I CMT LN +N IKS+V ERHLHEV LDKIT V+
Sbjct: 845 KQLARFQYSFYLFVAANCIWCMTGSLNCINCIKSIVGERHLHEVSLDKITAFV*PTFPVK 666
Query: 989 LLSPGYLVFVVIQSGN*S*AKSCNFSQWST 1078
L S YL+ ++IQS + S + NF QW++
Sbjct: 665 LFSS*YLICIIIQSCDGSPTEPSNFPQWTS 576
Score = 84.0 bits (177), Expect(2) = 2e-038
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = +2 / -2
Query: 1085 TAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINH 1264
T++I LH TKL+ KKM M+L F+ G PSVSK++ P+ILIE S +IIVFI H
Sbjct: 568 TSNIQYLHCRL*TKLKSKKMFMALYTFSEGLPSPSVSKMKRLPPSILIETSRQIIVFIYH 389
Query: 1265 ISIVGLPCFLLPSIVSMIFLILIDGRLDFHLVDLPSEARSKIQRS 1399
+ IV + +IV +IF +L + +++ S + +IQRS
Sbjct: 388 VCIVRFSRAFITTIVHVIFFVLFNSGQHLFFLNVASHS*GQIQRS 254
Score = 71.2 bits (149), Expect(3) = 7e-026
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 959 M*FCQGGLHEDAVR*QHF*CCLRH*GNMSCT*SSWLLQGDISCVEAWPVLCRV 801
+*FCQG LHEDA ++F*C L +*G +SCT SWLLQ D E WP +C +
Sbjct: 695 L*FCQGRLHEDAFLQRYF*CSLCN*GYLSCTRCSWLLQRDKKSTETWPTVCGI 853
Score = 58.8 bits (122), Expect(3) = 7e-026
Identities = 36/79 (45%), Positives = 46/79 (58%)
Frame = -1 / +3
Query: 1329 SMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKASSD 1150
S +NI TM + + + TI W INTMI L SMSM G + LLTDG P K S
Sbjct: 324 STKNITCTMVVMKARENLTIQTW*INTMIWRLVSMSMDGGSLFILLTDGEGRPSEKV*SA 503
Query: 1149 MSIFLPCNLV*NQE*RF*M 1093
M+IFL + V*+ +*R+ M
Sbjct: 504 MNIFLLFSFV*SLQ*RYWM 560
Score = 26.3 bits (51), Expect(3) = 7e-026
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / +2
Query: 1073 TTERNCKI*LNFSYRIE*QRIPDNQGKGA 987
+TE NC + L+F +RIE* I D + K A
Sbjct: 581 STEGNC*VQLDFHHRIE**CISDIKRKRA 667
Score = 25.8 bits (50), Expect(3) = 7e-065
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3 / -3
Query: 1335 TADLTSTLLIFPPRPEARSSAP 1400
TA + + PP PEARS+AP
Sbjct: 318 TAVSICSFSMLPPIPEARSNAP 253
>gb|DR686435.1|DR686435 EST1076513 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABG04 3' end, mRNA sequence
Length = 808
Score = 331 bits (717), Expect = 9e-090
Identities = 134/175 (76%), Positives = 146/175 (83%)
Frame = -3 / +3
Query: 1363 INKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 1184
I K ++ +AV+ +RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW
Sbjct: 282 IEKEQMLTAVEEYEKYHMYYGGDEGSRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 461
Query: 1183 NGESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQI 1004
GE+LRESIKRHEHFLALQL LKP MKVLDVGCGIGGPLREIARFS TS+TGLNNN YQI
Sbjct: 462 RGETLRESIKRHEHFLALQLCLKPAMKVLDVGCGIGGPLREIARFSWTSITGLNNNAYQI 641
Query: 1003 TRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEI 839
+RGKELNR G+ +CDFVK DFMKMPF ++TFDAVYAIEATCHAPD VGCYKEI
Sbjct: 642 SRGKELNRECGLDKSCDFVKGDFMKMPFSNDTFDAVYAIEATCHAPDAVGCYKEI 806
Score = 234 bits (505), Expect(2) = 4e-062
Identities = 113/150 (75%), Positives = 121/150 (80%)
Frame = +3 / -1
Query: 837 YISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYS 1016
+ISL*QPT SGA* VAS+A*TASKV GIFMKS LTKS + P LSSFPL I Y+
Sbjct: 808 FISL*QPTASGA*QVASIA*TASKVSLEKGIFMKSPLTKSQLLSSPHSLLSSFPLDI*YA 629
Query: 1017 LLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*A 1196
LLFNPV EV+LNLAISLSGPPIP PTS TFI GFK S RARKCS R +LSR+ SP HL*A
Sbjct: 628 LLFNPVMEVQLNLAISLSGPPIPHPTSNTFIAGFKQS*RARKCSWRFILSRRVSPLHL*A 449
Query: 1197 KWKDSPQPYS*KLVARS*YLLTISV*LDFL 1286
K KDSP PYS*KLVARS*YL T+SV*LDFL
Sbjct: 448 K*KDSPHPYS*KLVARS*YLFTMSV*LDFL 359
Score = 165 bits (354), Expect = 1e-039
Identities = 84/187 (44%), Positives = 114/187 (60%)
Frame = +2 / -3
Query: 839 YLLVATNWIRCMTCCLNGVNSIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFV 1018
YL VA N I CMT LN +N IKS+V ERHLHEV LDKIT V+L S YL+ +
Sbjct: 806 YLFVAANCIWCMTGSLNCINCIKSIVGERHLHEVSLDKITAFV*PTFPVKLFSS*YLICI 627
Query: 1019 VIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSK 1198
+IQS + S + NF QW++ T++I LH TKL+ KKM M+L F+ G PSVSK
Sbjct: 626 IIQSCDGSPTEPSNFPQWTSNPTSNIQYLHCRL*TKLKSKKMFMALYTFSEGLPSPSVSK 447
Query: 1199 VEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSMIFLILIDGRLDFHLVDLPSEA 1378
++ P+ILIE S +IIVFI H+ IV + +IV +IF +L + +++ S +
Sbjct: 446 MKRLPPSILIETSRQIIVFIYHVCIVRFSRAFITTIVHVIFFVLFNSGQHLFFLNVASHS 267
Query: 1379 RSKIQRS 1399
+IQRS
Sbjct: 266 *GQIQRS 246
Score = 77.6 bits (163), Expect(2) = 4e-021
Identities = 50/106 (47%), Positives = 57/106 (53%)
Frame = +1 / -2
Query: 838 ISPCSNQLDQVHDMLPQWRKQHQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIR 1017
+S CS+QL VHD PQ K HQK R ASS*S P*QNH F + *A F +S +
Sbjct: 807 LSLCSSQLHLVHDR*PQLHKLHQKYRWRKASS*SLP*QNHSFCLAHIPC*ALFLLISDMH 628
Query: 1018 CYSIR*LKLS*ILQFLSVVHLFHSPHLKPSFLVSNQVAGQENAHVA 1155
YSI * K +* QF SV H H PS N+ QEN H A
Sbjct: 627 YYSIL*WKSN*T*QFPSVDLQSHIQHPIPSLQALNKAEEQENVHGA 490
Score = 64.8 bits (135), Expect(2) = 5e-021
Identities = 47/116 (40%), Positives = 59/116 (50%)
Frame = -1 / +1
Query: 1329 SMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKASSD 1150
S +NI TM + + + TI W INTMI L SMSM G + LLTDG P K S
Sbjct: 316 STKNITCTMVVMKARENLTIQTW*INTMIWRLVSMSMDGGSLFILLTDGEGRPSEKV*SA 495
Query: 1149 MSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXLPD*ITTNTR*PGERSST 982
M+IFL + V*+ +*R+ M V H* K D*I + R E+S T
Sbjct: 496 MNIFLLFSFV*SLQ*RYWMLDVGLEVH*GKLLGSVGLPSQD*IIMHIRYQEEKSLT 663
Score = 57.4 bits (119), Expect(2) = 5e-021
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -2 / +2
Query: 959 M*FCQGGLHEDAVR*QHF*CCLRH*GNMSCT*SSWLLQGD 840
+*FCQG LHEDA ++F*C L +*G +SCT SWLLQ D
Sbjct: 686 L*FCQGRLHEDAFLQRYF*CSLCN*GYLSCTRCSWLLQRD 805
Score = 45.1 bits (92), Expect(2) = 4e-021
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1 / -2
Query: 1183 SICEQSGRIHPNHTHRS*WQDHSIY*PYQYS 1275
SICEQ+ + P HTHR+* DHSIY P YS
Sbjct: 462 SICEQNEKTPPIHTHRN*SPDHSIYLPCLYS 370
Score = 25.8 bits (50), Expect(2) = 4e-062
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3 / -1
Query: 1335 TADLTSTLLIFPPRPEARSSAP 1400
TA + + PP PEARS+AP
Sbjct: 310 TAVSICSFSMLPPIPEARSNAP 245
>gb|DR118894.1|DR118894 RTMG1_19_G09.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_19_G09_A029 5', mRNA sequence
Length = 578
Score = 292 bits (632), Expect(2) = 6e-079
Identities = 116/179 (64%), Positives = 142/179 (79%)
Frame = -3 / +1
Query: 922 FDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIK 743
F +TFDAVYAIEATCHAPD VGCYKEI RVLKPGQ FA YEWC+TD +DP N H++IK
Sbjct: 40 FLHDTFDAVYAIEATCHAPDAVGCYKEIKRVLKPGQLFAAYEWCMTDSFDPKNEEHQKIK 219
Query: 742 DEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWYXXXXXXXXXXXXXXLT 563
EIELG+GLPDIR+T QC++A+K AGFEV+++++L S +PWY LT
Sbjct: 220 AEIELGDGLPDIRTTNQCIEALKSAGFEVLFEENLTVSSTVPWYDPLDTSHFSLSSFRLT 399
Query: 562 SVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++GR +TR MV+ LE++ LAP+GSERVS+FLEKAAEGLV GG+K+IFTPMYFFL RKPL
Sbjct: 400 AIGRFLTRNMVRMLEFLRLAPEGSERVSSFLEKAAEGLVAGGRKDIFTPMYFFLARKPL 576
Score = 106 bits (227), Expect = 3e-022
Identities = 59/172 (34%), Positives = 92/172 (53%)
Frame = +2 / -3
Query: 401 KKEVHWREDLLLSALYQPFCSLLQEIRDPLTALRSKTNVLQGLDHCAGNHASHRGQTEAT 580
+K+VH +++ +PFCS LQ+ P TA Q +H + A++ +T+ T
Sbjct: 561 QKKVHRCKNIFPPPCNKPFCSFLQK*GYPFTAFWC*PQEFQHSNHISCQKATNGCETKTT 382
Query: 581 QGESAWIQGQVPRQGRIFSKILIPNNLKPGVFYCLETLPSASDIWQAIAKLNFILDPFVG 760
Q E I+ +PR K+L +LK F TL ++++ + I+K NF L+ V
Sbjct: 381 QREMTCIKWIIPRNC**DCKVLFKEHLKSSRFKSFNTLVCSTNVRKPISKFNFCLNLLVL 202
Query: 761 CIVRIIVIRNAPLVHGKALARLQHTIYLLVATNWIRCMTCCLNGVNSIKSVV 916
I+ + + +AP + K LAR Q++ YL VA N I CMT LN +N IKS+V
Sbjct: 201 FILWVKRVSHAPFICRKQLARFQYSFYLFVAANCIWCMTGSLNCINCIKSIV 46
Score = 93.2 bits (197), Expect(3) = 2e-037
Identities = 47/102 (46%), Positives = 55/102 (53%)
Frame = +3 / -1
Query: 387 RGFRTRKKYIGVKIXXXXXXXXXXXXXXRKLETLSLPCGARPTYSRALTIVRVIMRPTEV 566
+GFR RKKYIGVKI + +TLSLP GA S LTI V RP V
Sbjct: 575 KGFRARKKYIGVKISFLPPATSPSAAFSKNEDTLSLPSGANLRNSNILTIFLVKKRPMAV 396
Query: 567 KRKLLRENRLGSKGKYQGKGESSARSLSQTTSNPASFTAWRH 692
+RKLLRE L S G Y G + + R S++TSNPA A H
Sbjct: 395 RRKLLREK*LVSSGSYHGTVDETVRFSSKSTSNPADLRASIH 270
Score = 78.5 bits (165), Expect(3) = 2e-037
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3 / -1
Query: 783 SVMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKV 911
SVMHHSY A WPGF+T +ISL*QPT SGA* VAS+A*TASKV
Sbjct: 179 SVMHHSYAANSWPGFSTLFISL*QPTASGA*QVASIA*TASKV 51
Score = 24.0 bits (46), Expect(3) = 2e-037
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 920 ERHLHEVRLDK 952
ERHLHEV L K
Sbjct: 43 ERHLHEVSLTK 11
Score = 24.0 bits (46), Expect(2) = 6e-079
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / +2
Query: 952 FVKADFMKMPF 920
F + DFMKMPF
Sbjct: 11 FCQGDFMKMPF 43
>gb|DR098181.1|DR098181 STRR1_39_D08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_39_D08_A033 5', mRNA sequence
Length = 741
Score = 292 bits (632), Expect = 5e-078
Identities = 116/179 (64%), Positives = 142/179 (79%)
Frame = -3 / +1
Query: 922 FDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIK 743
F +TFDAVYAIEATCHAPD VGCYKEI RVLKPGQ FA YEWC+TD +DP N H++IK
Sbjct: 4 FLHDTFDAVYAIEATCHAPDAVGCYKEIKRVLKPGQLFAAYEWCMTDSFDPKNEEHQKIK 183
Query: 742 DEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWYXXXXXXXXXXXXXXLT 563
EIELG+GLPDIR+T QC++A+K AGFEV+++++L S +PWY LT
Sbjct: 184 AEIELGDGLPDIRTTNQCIEALKSAGFEVLFEENLTVSSTVPWYDPLDTSHFSLSSFRLT 363
Query: 562 SVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++GR +TR MV+ LE++ LAP+GSERVS+FLEKAAEGLV GG+K+IFTPMYFFL RKPL
Sbjct: 364 AIGRFLTRNMVRMLEFLRLAPEGSERVSSFLEKAAEGLVAGGRKDIFTPMYFFLARKPL 540
Score = 106 bits (227), Expect = 3e-022
Identities = 59/172 (34%), Positives = 92/172 (53%)
Frame = +2 / -1
Query: 401 KKEVHWREDLLLSALYQPFCSLLQEIRDPLTALRSKTNVLQGLDHCAGNHASHRGQTEAT 580
+K+VH +++ +PFCS LQ+ P TA Q +H + A++ +T+ T
Sbjct: 525 QKKVHRCKNIFPPPCNKPFCSFLQK*GYPFTAFWC*PQEFQHSNHISCQKATNGCETKTT 346
Query: 581 QGESAWIQGQVPRQGRIFSKILIPNNLKPGVFYCLETLPSASDIWQAIAKLNFILDPFVG 760
Q E I+ +PR K+L +LK F TL ++++ + I+K NF L+ V
Sbjct: 345 QREMTCIKWIIPRNC**DCKVLFKEHLKSSRFKSFNTLVCSTNVRKPISKFNFCLNLLVL 166
Query: 761 CIVRIIVIRNAPLVHGKALARLQHTIYLLVATNWIRCMTCCLNGVNSIKSVV 916
I+ + + +AP + K LAR Q++ YL VA N I CMT LN +N IKS+V
Sbjct: 165 FILWVKRVSHAPFICRKQLARFQYSFYLFVAANCIWCMTGSLNCINCIKSIV 10
Score = 93.6 bits (198), Expect(2) = 8e-036
Identities = 48/104 (46%), Positives = 56/104 (53%)
Frame = +3 / -2
Query: 381 SRRGFRTRKKYIGVKIXXXXXXXXXXXXXXRKLETLSLPCGARPTYSRALTIVRVIMRPT 560
S +GFR RKKYIGVKI + +TLSLP GA S LTI V RP
Sbjct: 545 SFKGFRARKKYIGVKISFLPPATSPSAAFSKNEDTLSLPSGANLRNSNILTIFLVKKRPM 366
Query: 561 EVKRKLLRENRLGSKGKYQGKGESSARSLSQTTSNPASFTAWRH 692
V+RKLLRE L S G Y G + + R S++TSNPA A H
Sbjct: 365 AVRRKLLREK*LVSSGSYHGTVDETVRFSSKSTSNPADLRASIH 234
Score = 78.5 bits (165), Expect(2) = 8e-036
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3 / -2
Query: 783 SVMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKV 911
SVMHHSY A WPGF+T +ISL*QPT SGA* VAS+A*TASKV
Sbjct: 143 SVMHHSYAANSWPGFSTLFISL*QPTASGA*QVASIA*TASKV 15
>gb|DN461652.1|DN461652 EST957451 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIIC81 5' end, mRNA sequence
Length = 923
Score = 256 bits (554), Expect(2) = 3e-077
Identities = 99/225 (44%), Positives = 144/225 (64%)
Frame = -3 / +3
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
+ N +V+ +Y+L T YE+GWG+SFHF+ +G+S +E + HE +A L +KPG
Sbjct: 33 KADNVPKLVDTFYNLVTDIYEWGWGQSFHFSPALHGKSHKEETRMHEERVADLLSMKPGD 212
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKM 926
+VLD GCG+GGP+R IA S ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KM
Sbjct: 213 RVLDAGCGVGGPMRAIAAHSGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKM 392
Query: 925 PFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRI 746
PF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YEW T + +N H I
Sbjct: 393 PFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEI 572
Query: 745 KDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWY 611
IE G+ LP +R+ +Q ++ GFEV+ ++DLA PW+
Sbjct: 573 IHGIEHGDALPGLRNYKQIVEIANSVGFEVLEERDLALPPAQPWW 707
Score = 98.7 bits (209), Expect(2) = 3e-021
Identities = 65/159 (40%), Positives = 77/159 (48%)
Frame = +3 / -2
Query: 786 VMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHVP 965
V+ HS PGF TR IS SGA VASM * ASK+LS+ GI K T S
Sbjct: 532 VVTHS*VT*RRPGFKTR*ISAYTSWSSGAWQVASME*AASKLLSAKGILRKLPQTTSQRR 353
Query: 966 LIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKC 1145
PA L W SL+ P A++ GPP P P S+T PGF S A +
Sbjct: 352 SSPAFLLWLRARSTW*SLMVIPTILAPECAAMARIGPPTPHPASRTRSPGFMLSRSATRS 173
Query: 1146 SCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLT 1262
SC + S D P + KWK PQP+S* V R * + T
Sbjct: 172 SCMRVSSLWDFPCNAGEKWKLCPQPHS*ISVTRL*KVST 56
Score = 53.8 bits (111), Expect(2) = 3e-077
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +3
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 753 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 902
Score = 24.4 bits (47), Expect(2) = 3e-021
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3 / -2
Query: 612 YQGKGESSARSLSQTTSNPASFTAWRHC 695
+QG ARSLS TS P F C
Sbjct: 706 HQG*AGGRARSLSSKTSKPTLFAISTIC 623
>gb|DN460009.1|DN460009 EST955808 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIHT54 5' end, mRNA sequence
Length = 905
Score = 254 bits (549), Expect = 1e-066
Identities = 98/224 (43%), Positives = 143/224 (63%)
Frame = -3 / +1
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
+ N +V+ +Y+L T YE+GWG+SFHF+ +G+S +E + HE +A L +KPG
Sbjct: 232 KADNVPKLVDTFYNLVTDIYEWGWGQSFHFSPALHGKSHKEETRMHEERVADLLSMKPGD 411
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKM 926
+VLD GCG+GGP+R IA S ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KM
Sbjct: 412 RVLDAGCGVGGPMRAIAAHSGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKM 591
Query: 925 PFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRI 746
PF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YEW T + +N H I
Sbjct: 592 PFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEI 771
Query: 745 KDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPW 614
IE G+ LP +R+ +Q ++ GF+V+ ++DLA PW
Sbjct: 772 IHGIEHGDALPGLRNYKQIVEIANSVGFDVLEERDLALPPAQPW 903
Score = 98.7 bits (209), Expect(2) = 3e-021
Identities = 65/159 (40%), Positives = 77/159 (48%)
Frame = +3 / -1
Query: 786 VMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHVP 965
V+ HS PGF TR IS SGA VASM * ASK+LS+ GI K T S
Sbjct: 731 VVTHS*VT*RRPGFKTR*ISAYTSWSSGAWQVASME*AASKLLSAKGILRKLPQTTSQRR 552
Query: 966 LIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKC 1145
PA L W SL+ P A++ GPP P P S+T PGF S A +
Sbjct: 551 SSPAFLLWLRARSTW*SLMVIPTILAPECAAMARIGPPTPHPASRTRSPGFMLSRSATRS 372
Query: 1146 SCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLT 1262
SC + S D P + KWK PQP+S* V R * + T
Sbjct: 371 SCMRVSSLWDFPCNAGEKWKLCPQPHS*ISVTRL*KVST 255
Score = 24.4 bits (47), Expect(2) = 3e-021
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3 / -1
Query: 612 YQGKGESSARSLSQTTSNPASFTAWRHC 695
+QG ARSLS TS P F C
Sbjct: 905 HQG*AGGRARSLSSKTSKPTLFAISTIC 822
>gb|CF387574.1|CF387574 RTDR1_20_C08.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_20_C08_A015 5', mRNA
sequence
Length = 765
Score = 208 bits (448), Expect(2) = 4e-062
Identities = 81/182 (44%), Positives = 116/182 (63%)
Frame = -3 / +1
Query: 1156 KRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRL 977
+ HE ++ L +KPG +VLD GCG+GGP+R IA S ++ G+ N+YQ+ R + N+
Sbjct: 4 RMHEERVSDLLSMKPGDRVLDAGCGVGGPMRAIAAHSGANIVGITINDYQVERARSHNKK 183
Query: 976 AGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYE 797
AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YE
Sbjct: 184 AGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYE 363
Query: 796 WCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLP 617
W T + +N H I IE G+ LP +R+ +Q ++ GFEV+ ++DLA P
Sbjct: 364 WVTTPKFQGDNPEHVEIIHGIEHGDALPGLRNYKQIVEIANSVGFEVLEERDLALPPAQP 543
Query: 616 WY 611
W+
Sbjct: 544 WW 549
Score = 51.9 bits (107), Expect(2) = 4e-062
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = -3 / +1
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + +KPL
Sbjct: 595 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICQKPL 744
>gb|CF672887.1|CF672887 RTCNT1_74_D06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_74_D06_A029 5', mRNA sequence
Length = 740
Score = 149 bits (321), Expect(2) = 8e-062
Identities = 59/107 (55%), Positives = 76/107 (71%)
Frame = -3 / +3
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
R+ Y MVN +YDL T FYEYGWG+SFHFA R ES S+ R E ++AL+L L GM
Sbjct: 150 RRKQYMKMVNDFYDLVTHFYEYGWGQSFHFAPRHRFESFEASVSRLEFYVALKLKLDKGM 329
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGIS 965
+VLDVGCGIGGP R IARFS ++ GLNNN YQ+ R +++ + A ++
Sbjct: 330 RVLDVGCGIGGPARAIARFSQATIIGLNNNSYQLQRCRDITKEARLT 470
Score = 109 bits (232), Expect(2) = 8e-062
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = -3 / +3
Query: 955 DFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHY 776
++++ DF +P DN+ DA ++ EA HAP V YKE++RVLKPG CFA EW +T+ Y
Sbjct: 477 EWLQGDFHHIPAADNSLDAGFSFEAIEHAPQKVVVYKELFRVLKPGACFADVEWVMTNKY 656
Query: 775 DPNNATHKRIKDEIELGNGLPDIRS 701
DPNN H IK I GNGLPDI +
Sbjct: 657 DPNNKKHNDIKMGIMKGNGLPDIET 731
Score = 84.5 bits (178), Expect(2) = 3e-022
Identities = 47/86 (54%), Positives = 52/86 (60%)
Frame = +3 / -2
Query: 1008 WYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFH 1187
W LLF P+ AI+ +GPPIPQPTSKT IP + RA S R + KDS
Sbjct: 427 W*LLLFKPMMVA*EKRAIARAGPPIPQPTSKTRIPLSNFNLRAT*NSRRETEASKDSNLC 248
Query: 1188 L*AKWKDSPQPYS*KLVARS*YLLTI 1265
L AKWKD PQPYS*K V RS* LTI
Sbjct: 247 LGAKWKD*PQPYS*KCVTRS*KSLTI 170
Score = 41.8 bits (85), Expect(2) = 3e-022
Identities = 26/89 (29%), Positives = 47/89 (52%)
Frame = +2 / -1
Query: 707 DIWQAIAKLNFILDPFVGCIVRIIVIRNAPLVHGKALARLQHTIYLLVATNWIRCMTCCL 886
+I + +A + L+ V +VR++++ + P +A ARL+H+ LLV N + + L
Sbjct: 725 NIRKTVALHDTHLNVVVLLVVRVVLVGHHPFNISEASARLEHSEQLLVDNNLLGSVFNGL 546
Query: 887 NGVNSIKSVVIERHLHEVRLDKITCSTNS 973
G SI++VV + E+ L + S S
Sbjct: 545 EGETSIETVVSGGDVVEITLQPLQVSQTS 459
>gb|DR088681.1|DR088681 RTAL1_3_F02.g1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_3_F02_A029 5', mRNA sequence
Length = 661
Score = 165 bits (354), Expect(2) = 7e-061
Identities = 63/121 (52%), Positives = 83/121 (68%)
Frame = -3 / +2
Query: 1288 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 1109
AR NY ++VN YYD AT YE+ W +SFHF+ GE+ S+ RHEH+LAL++GLKPG
Sbjct: 137 ARVDNYAEVVNGYYDGATELYEFAWAQSFHFSRFNKGEAFNASLARHEHYLALRMGLKPG 316
Query: 1108 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 929
M+VLDVGCG+GGP REI+RF+ V GLNNN +Q+ R + + + FVK DFM
Sbjct: 317 MRVLDVGCGVGGPAREISRFADVDVVGLNNNAFQVGRATKYAKEINLQDQVRFVKGDFMD 496
Query: 928 M 926
+
Sbjct: 497 L 499
Score = 90.9 bits (192), Expect(2) = 7e-061
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = -3 / +2
Query: 922 FDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDP 770
F +N+FDAVYAIEATCHAP G Y +I++VLKPG F VYEWC+TD ++P
Sbjct: 509 FGENSFDAVYAIEATCHAPTWEGVYGQIFKVLKPGGIFGVYEWCMTDEWNP 661
Score = 82.6 bits (174), Expect(2) = 2e-024
Identities = 43/90 (47%), Positives = 49/90 (54%)
Frame = +3 / -2
Query: 1008 WYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFH 1187
W +LLF P T NL IS +GPP P PTS+T +PG +P RAR CS R + K SP
Sbjct: 417 WKALLFKPTTSTSANLEISRAGPPTPHPTSRTRMPGLRPILRAR*CSWRAREALKASPLL 238
Query: 1188 L*AKWKDSPQPYS*KLVARS*YLLTISV*L 1277
KW D Q S VA S* T S *L
Sbjct: 237 NREKWND*AQANSYSSVAPS**PFTTSA*L 148
Score = 51.0 bits (105), Expect(2) = 2e-024
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = +3 / -2
Query: 783 SVMHHSYTAKHWPGFNTRYISL*QPTGSGA*HVASMA*TASKVLSSN 923
SVMHHSYT K PG T I * P+ GA VASMA*TAS S N
Sbjct: 648 SVMHHSYTPKIPPGLRTLKI*P*TPSQVGAWQVASMA*TASNEFSPN 508
>gb|DN464524.1|DN464524 EST960323 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIJD20 5' end, mRNA sequence
Length = 921
Score = 234 bits (506), Expect = 1e-060
Identities = 90/201 (44%), Positives = 131/201 (65%)
Frame = -3 / +3
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
+ N +V+ +Y+L T YE+GWG+SFHF+ +G+S +E + HE +A L +KPG
Sbjct: 306 KADNVPKLVDTFYNLVTDIYEWGWGQSFHFSPALHGKSHKEETRMHEERVADLLSMKPGD 485
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKM 926
+VLD GCG+GGP+R IA S ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KM
Sbjct: 486 RVLDAGCGVGGPMRAIAAHSGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKM 665
Query: 925 PFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRI 746
PF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YEW T + +N H I
Sbjct: 666 PFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEI 845
Query: 745 KDEIELGNGLPDIRSTRQCLQ 683
IE G+ LP +R+ +Q ++
Sbjct: 846 IHGIEHGDALPGLRNYKQIVE 908
>gb|CF479172.1|CF479172 RTWW3_24_C04.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_24_C04_A022 5', mRNA sequence
Length = 664
Score = 233 bits (503), Expect = 3e-060
Identities = 90/201 (44%), Positives = 130/201 (64%)
Frame = -3 / +3
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
+ N +V+ +Y+L T YE+GWG+SFHF+ +G+S +E + HE +A L +KPG
Sbjct: 60 KADNVPKLVDTFYNLVTDIYEWGWGQSFHFSPALHGKSHKEETRMHEERVADLLSMKPGD 239
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKM 926
+VLD GCG+GGP+R IA S ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KM
Sbjct: 240 RVLDAGCGVGGPMRAIAAHSGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKM 419
Query: 925 PFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRI 746
PF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YEW T + +N H I
Sbjct: 420 PFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEI 599
Query: 745 KDEIELGNGLPDIRSTRQCLQ 683
IE G+ LP +R+ Q ++
Sbjct: 600 IHGIEHGDALPGLRNYXQIVE 662
>gb|DR168008.1|DR168008 RTPHOS1_22_C11.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_22_C11_A029 5', mRNA sequence
Length = 600
Score = 233 bits (503), Expect = 3e-060
Identities = 95/179 (53%), Positives = 119/179 (66%)
Frame = -3 / +2
Query: 1360 NKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWN 1181
N+ +V++ ++ E R NY D+V YYDLAT FYE GWGE FHFA ++
Sbjct: 62 NEKDVETYINKYNDLHDDNKLTTEERNKNYQDIVVGYYDLATDFYEKGWGEHFHFAKQFK 241
Query: 1180 GESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQIT 1001
GE E++KR E +LAL+ +K G KVLD+GCGIGGP+R IARF+ ++TG N N YQ+
Sbjct: 242 GEPYTEALKRQEFYLALRAHMKEGSKVLDIGCGIGGPMRNIARFTGANITGFNLNAYQVK 421
Query: 1000 RGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLK 824
R ELN AG+S C V+ DFMKMPF+DN+FD Y IEAT HAP VG Y E YRVLK
Sbjct: 422 RATELNAKAGLSHLCTVVQGDFMKMPFEDNSFDICYEIEATAHAPSKVGVYSEAYRVLK 598
Score = 122 bits (261), Expect = 7e-027
Identities = 73/149 (48%), Positives = 86/149 (57%)
Frame = +3 / -1
Query: 822 GFNTRYISL*QPTGSGA*HVASMA*TASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPL 1001
GF TR S * PT GA* VAS++* SK LSS GIFMKS T H PA +S
Sbjct: 600 GFKTR*ASE*TPTLLGA*AVASIS*QISKELSSKGIFMKSPWTTVHK*DKPALAFNSVAR 421
Query: 1002 VIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSP 1181
+ W + PV +NLAI L GPPIP P S+T P F + RA+ S RL S SP
Sbjct: 420 LTW*AFKLKPVILAPVNLAIFLMGPPIPHPISRTLEPSFI*ARRAK*NS*RLRASV*GSP 241
Query: 1182 FHL*AKWKDSPQPYS*KLVARS*YLLTIS 1268
+ AKWK SP P+S*K VA+S* T+S
Sbjct: 240 LNCLAKWKCSPHPFS*KSVAKS**PTTMS 154
>gb|BX253610.1|BX253610 BX253610 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP085H05, mRNA sequence
Length = 462
Score = 230 bits (496), Expect = 3e-059
Identities = 91/150 (60%), Positives = 116/150 (77%)
Frame = -3 / +3
Query: 835 RVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEV 656
RVLKPGQ FA YEWC+TD +DP N H++IK EIELG+GLPDIR+T QC++A+K AGFEV
Sbjct: 3 RVLKPGQLFAAYEWCMTDSFDPKNEEHQKIKAEIELGDGLPDIRTTNQCIEALKSAGFEV 182
Query: 655 VWDKDLAEDSPLPWYXXXXXXXXXXXXXXLTSVGRMITRTMVKALEYVGLAPQGSERVSN 476
+++++L S +PWY LT++GR +TR MV+ LE++ LAP+GSERVS+
Sbjct: 183 LFEENLTVSSTVPWYDPLDTSHFSLNSFRLTAIGRFLTRNMVRMLEFLRLAPEGSERVSS 362
Query: 475 FLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
FLEKAAEGLV GG+K+I TPMYFFL RKPL
Sbjct: 363 FLEKAAEGLVAGGRKDISTPMYFFLARKPL 452
Score = 90.0 bits (190), Expect(2) = 5e-023
Identities = 46/104 (44%), Positives = 55/104 (52%)
Frame = +3 / -3
Query: 381 SRRGFRTRKKYIGVKIXXXXXXXXXXXXXXRKLETLSLPCGARPTYSRALTIVRVIMRPT 560
S +GFR RKKYIGV+I + +TLSLP GA S LTI V RP
Sbjct: 457 SFKGFRARKKYIGVEISFLPPATSPSAAFSKNEDTLSLPSGANLRNSNILTIFLVKKRPM 278
Query: 561 EVKRKLLRENRLGSKGKYQGKGESSARSLSQTTSNPASFTAWRH 692
V+RKL RE L S G Y G + + R S++TSNPA A H
Sbjct: 277 AVRRKLFREK*LVSSGSYHGTVDETVRFSSKSTSNPADLRASIH 146
Score = 39.1 bits (79), Expect(2) = 5e-023
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3 / -3
Query: 783 SVMHHSYTAKHWPGFNT 833
SVMHHSY A WPGF+T
Sbjct: 55 SVMHHSYAANSWPGFST 5
>dbj|BD273093.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 582
Score = 225 bits (486), Expect = 6e-058
Identities = 92/123 (74%), Positives = 100/123 (81%)
Frame = -3 / +1
Query: 1363 INKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 1184
I K ++ +AV+ +RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW
Sbjct: 214 IEKEQMLTAVEEYEKYHMYYGGDEGSRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 393
Query: 1183 NGESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQI 1004
GE+LRESIKRHEHFLAL L LKP MKVLDVGCGIGGPLREIARFS TS+TGLNNN YQI
Sbjct: 394 KGETLRESIKRHEHFLALHLCLKPAMKVLDVGCGIGGPLREIARFSRTSITGLNNNAYQI 573
Query: 1003 TRG 995
+RG
Sbjct: 574 SRG 582
Score = 166 bits (358), Expect(2) = 6e-042
Identities = 77/97 (79%), Positives = 81/97 (83%)
Frame = +3 / -2
Query: 996 PLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKD 1175
PL I Y+LLFNPV EV LNLAISLSGPPIP PTS TFI GFK RARKCS R +LSR+
Sbjct: 581 PLDI*YALLFNPVIEVRLNLAISLSGPPIPHPTSNTFIAGFKQR*RARKCSWRFILSRRV 402
Query: 1176 SPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 1286
SPFHL*AK KDSP PYS*KLVARS*YL T+SV*LDFL
Sbjct: 401 SPFHL*AK*KDSPHPYS*KLVARS*YLFTMSV*LDFL 291
Score = 108 bits (231), Expect = 9e-023
Identities = 53/132 (40%), Positives = 81/132 (61%)
Frame = +2 / -1
Query: 1004 YLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSI 1183
YL+ ++IQS + S + NFSQW++ T++I LH TK++ KKM M+L F+ G
Sbjct: 573 YLICIIIQSCDRSPTEPSNFSQWTSNPTSNIQYLHCRL*TKVKSKKMFMALYTFSEGLPF 394
Query: 1184 PSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSMIFLILIDGRLDFHLVD 1363
PSVSK++ P+ILIE S +IIVFI H+ IV + +IV +IF +L + ++
Sbjct: 393 PSVSKMKRLPPSILIETSRQIIVFIYHVCIVRFSRAFITTIVHVIFFVLFNSGQHLFFLN 214
Query: 1364 LPSEARSKIQRS 1399
+ S + +IQRS
Sbjct: 213 VASHS*GQIQRS 178
Score = 25.8 bits (50), Expect(2) = 6e-042
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3 / -2
Query: 1335 TADLTSTLLIFPPRPEARSSAP 1400
TA + + PP PEARS+AP
Sbjct: 242 TAVSICSFSMLPPIPEARSNAP 177
>gb|DR742673.1|DR742673 RTCU1_5_F04.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_5_F04_A029 5', mRNA sequence
Length = 741
Score = 214 bits (462), Expect = 1e-054
Identities = 84/142 (59%), Positives = 109/142 (76%)
Frame = -3 / -1
Query: 811 FAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAE 632
FA YEWC+TD +DP N H++IK EIELG+GLPDIR+T QC++A+K AG EV+++++L
Sbjct: 741 FAAYEWCMTDSFDPKNEEHQKIKAEIELGDGLPDIRTTNQCIEALKSAGSEVLFEENLTV 562
Query: 631 DSPLPWYXXXXXXXXXXXXXXLTSVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEG 452
S +PWY LT++GR +TR MV+ LE++ LAP+GSERVS+FLEKAAEG
Sbjct: 561 SSTVPWYDPLDTSHFSLSSFRLTAIGRFLTRNMVRMLEFLRLAPEGSERVSSFLEKAAEG 382
Query: 451 LVEGGKKEIFTPMYFFLVRKPL 386
LV GG+K+IFTPMYFFL RKPL
Sbjct: 381 LVAGGRKDIFTPMYFFLARKPL 316
>gb|CV033059.1|CV033059 RTNACL1_20_B02.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_20_B02_A029 3', mRNA sequence
Length = 771
Score = 210 bits (453), Expect = 2e-053
Identities = 81/139 (58%), Positives = 107/139 (76%)
Frame = -3 / +3
Query: 802 YEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSP 623
YEWC+TD +DP N H++IK EIELG+GLPDIR+T QC++A+K AG+EV+++++L S
Sbjct: 6 YEWCMTDSFDPKNEEHQKIKAEIELGDGLPDIRTTNQCIEALKSAGYEVLFEENLTVSST 185
Query: 622 LPWYXXXXXXXXXXXXXXLTSVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVE 443
+PWY LT++GR +TR MV+ LE++ LAP+GSERVS+FLEK AEGLV
Sbjct: 186 VPWYDPLDTSHFSLSSFRLTAIGRFLTRNMVRMLEFLRLAPEGSERVSSFLEKVAEGLVA 365
Query: 442 GGKKEIFTPMYFFLVRKPL 386
GG+K+IFTPMYFFL RKPL
Sbjct: 366 GGRKDIFTPMYFFLARKPL 422
>gb|DR098107.1|DR098107 STRR1_39_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_39_D08_A033 3', mRNA sequence
Length = 770
Score = 210 bits (453), Expect = 2e-053
Identities = 82/138 (59%), Positives = 107/138 (77%)
Frame = -3 / +1
Query: 799 EWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPL 620
EWC+TD +DP N H++IK EIELG+GLPDIR+T QC++A+K AGFEV+++++L S +
Sbjct: 1 EWCMTDSFDPKNEEHQKIKAEIELGDGLPDIRTTNQCIEALKSAGFEVLFEENLTVSSTV 180
Query: 619 PWYXXXXXXXXXXXXXXLTSVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEG 440
PWY LT++GR +TR MV+ LE++ LAP+GSERVS+FLEKAAEGLV G
Sbjct: 181 PWYDPLDTSHFSLSSFRLTAIGRFLTRNMVRMLEFLRLAPEGSERVSSFLEKAAEGLVAG 360
Query: 439 GKKEIFTPMYFFLVRKPL 386
G+K+IFTPMYFFL RKPL
Sbjct: 361 GRKDIFTPMYFFLARKPL 414
>gb|CF388646.1|CF388646 RTDR2_4_H02.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_4_H02_A021 5', mRNA sequence
Length = 686
Score = 209 bits (451), Expect = 4e-053
Identities = 82/182 (45%), Positives = 116/182 (63%)
Frame = -3 / +1
Query: 1156 KRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRL 977
+ HE +A L +KPG +VLD GCG+GGP+R IA S ++ G+ N+YQ+ R + N+
Sbjct: 1 RMHEERVADLLSMKPGDRVLDAGCGVGGPMRAIAAHSGANIVGITINDYQVERARSHNKK 180
Query: 976 AGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYE 797
AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YE
Sbjct: 181 AGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYE 360
Query: 796 WCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLP 617
W T + +N H I IE G+ LP +R+ +Q ++ GFEV+ ++DLA P
Sbjct: 361 WVTTPKFQGDNPEHVEIIHGIEHGDALPGLRNYKQIVEIANSVGFEVLEERDLALPPAQP 540
Query: 616 WY 611
W+
Sbjct: 541 WW 546
>gb|CX713935.1|CX713935 RTPQ1_15_D05.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_15_D05_A032 3', mRNA sequence
Length = 800
Score = 200 bits (432), Expect = 2e-050
Identities = 79/87 (90%), Positives = 82/87 (94%)
Frame = -3 / +2
Query: 1288 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 1109
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW GE+LRESIKRHEHFLAL L LKP
Sbjct: 539 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWKGETLRESIKRHEHFLALHLCLKPA 718
Query: 1108 MKVLDVGCGIGGPLREIARFSSTSVTG 1028
MKVLDVGCGIGGPLREIARFS TS+TG
Sbjct: 719 MKVLDVGCGIGGPLREIARFSRTSITG 799
Score = 149 bits (320), Expect = 5e-035
Identities = 69/86 (80%), Positives = 71/86 (82%)
Frame = +3 / -3
Query: 1029 PVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKD 1208
PV EV LNLAISLSGPPIP PTS TFI GFK RARKCS R +LSR SPFHL*AK KD
Sbjct: 798 PVIEVRLNLAISLSGPPIPHPTSNTFIAGFKQR*RARKCSWRFILSRSVSPFHL*AK*KD 619
Query: 1209 SPQPYS*KLVARS*YLLTISV*LDFL 1286
SP PYS*KLVARS*YL T+SV*LDFL
Sbjct: 618 SPHPYS*KLVARS*YLFTMSV*LDFL 541
>gb|DR015808.1|DR015808 STRS1_5_F05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_F05_A034 5', mRNA sequence
Length = 725
Score = 166 bits (356), Expect(2) = 2e-049
Identities = 68/168 (40%), Positives = 97/168 (57%)
Frame = -3 / +3
Query: 1114 PGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADF 935
PG L +G G R ++ G+ N+YQ+ R + N+ AG+ C+ V +F
Sbjct: 6 PGTGFLTLGLEWEGQCGPSQRTRGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNF 185
Query: 934 MKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATH 755
+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YEW T + +N H
Sbjct: 186 LKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYEWVTTPKFQGDNPEH 365
Query: 754 KRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWY 611
I IE G+ LP +R+ +Q ++ GFEV+ ++DLA PW+
Sbjct: 366 VEIIHGIEHGDALPGLRNYKQIVEIANSVGFEVLEERDLALPPAQPWW 509
Score = 51.9 bits (107), Expect(2) = 2e-049
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = -3 / +3
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + +KPL
Sbjct: 555 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICQKPL 704
>gb|BX679115.1|BX679115 BX679115 RS Pinus pinaster cDNA clone RS20A4, mRNA sequence
Length = 627
Score = 197 bits (424), Expect = 2e-049
Identities = 80/189 (42%), Positives = 110/189 (58%)
Frame = -3 / +3
Query: 1189 RWNGESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEY 1010
R G RE + HE +A L +KPG +VLD GCG+GGP+R IA S +V G+ N+Y
Sbjct: 21 RCTGNPTREETRMHEERVADLLSMKPGDRVLDAGCGVGGPMRAIAAHSGANVVGITINDY 200
Query: 1009 QITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRV 830
Q+ R + N+ A + C+ V +F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRV
Sbjct: 201 QVERARSHNKKAXLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRV 380
Query: 829 LKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVW 650
LKPG+ + YEW T + +N H I IE G+ LP +R+ +Q ++ G W
Sbjct: 381 LKPGRLYVTYEWVTTPKFQGDNPEHVEIIHGIEHGDALPGLRNYKQIVEIANSVGL*ASW 560
Query: 649 DKDLAEDSP 623
+ P
Sbjct: 561 RRGTWRSRP 587
>gb|CO409454.1|CO409454 EST839839 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PIAKQ13 5' end, mRNA sequence
Length = 925
Score = 160 bits (345), Expect(2) = 2e-048
Identities = 62/146 (42%), Positives = 91/146 (62%)
Frame = -3 / +1
Query: 1048 SSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHA 869
+ ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KMPF DN+FDA Y+IEATCHA
Sbjct: 4 AGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHA 183
Query: 868 PDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQC 689
P+ Y EIYRVLKPG+ + YEW T + +N H I IE G+ LP +R+ +Q
Sbjct: 184 PELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEIIHGIEHGDALPGLRNYKQI 363
Query: 688 LQAVKDAGFEVVWDKDLAEDSPLPWY 611
++ GFEV+ ++DLA PW+
Sbjct: 364 VEIANSVGFEVLEERDLALPPAQPWW 441
Score = 53.8 bits (111), Expect(2) = 2e-048
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +1
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 487 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 636
>gb|DN446266.1|DN446266 EST942065 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIBF77 5' end, mRNA sequence
Length = 924
Score = 160 bits (345), Expect(2) = 2e-048
Identities = 62/146 (42%), Positives = 91/146 (62%)
Frame = -3 / +1
Query: 1048 SSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHA 869
+ ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KMPF DN+FDA Y+IEATCHA
Sbjct: 4 AGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHA 183
Query: 868 PDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQC 689
P+ Y EIYRVLKPG+ + YEW T + +N H I IE G+ LP +R+ +Q
Sbjct: 184 PELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEIIHGIEHGDALPGLRNYKQI 363
Query: 688 LQAVKDAGFEVVWDKDLAEDSPLPWY 611
++ GFEV+ ++DLA PW+
Sbjct: 364 VEIANSVGFEVLEERDLALPPAQPWW 441
Score = 53.8 bits (111), Expect(2) = 2e-048
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +1
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 487 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 636
>gb|DT625515.1|DT625515 EST1157439 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA079 5' end, mRNA sequence
Length = 902
Score = 160 bits (345), Expect(2) = 2e-048
Identities = 62/146 (42%), Positives = 91/146 (62%)
Frame = -3 / +1
Query: 1048 SSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHA 869
+ ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KMPF DN+FDA Y+IEATCHA
Sbjct: 4 AGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHA 183
Query: 868 PDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQC 689
P+ Y EIYRVLKPG+ + YEW T + +N H I IE G+ LP +R+ +Q
Sbjct: 184 PELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEIIHGIEHGDALPGLRNYKQI 363
Query: 688 LQAVKDAGFEVVWDKDLAEDSPLPWY 611
++ GFEV+ ++DLA PW+
Sbjct: 364 VEIANSVGFEVLEERDLALPPAQPWW 441
Score = 53.8 bits (111), Expect(2) = 2e-048
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +1
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 487 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 636
>gb|CO409265.1|CO409265 EST839650 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PIAKN56 5' end, mRNA sequence
Length = 880
Score = 160 bits (345), Expect(2) = 2e-048
Identities = 62/146 (42%), Positives = 91/146 (62%)
Frame = -3 / +1
Query: 1048 SSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHA 869
+ ++ G+ N+YQ+ R + N+ AG+ C+ V +F+KMPF DN+FDA Y+IEATCHA
Sbjct: 4 AGANIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHA 183
Query: 868 PDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQC 689
P+ Y EIYRVLKPG+ + YEW T + +N H I IE G+ LP +R+ +Q
Sbjct: 184 PELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEIIHGIEHGDALPGLRNYKQI 363
Query: 688 LQAVKDAGFEVVWDKDLAEDSPLPWY 611
++ GFEV+ ++DLA PW+
Sbjct: 364 VEIANSVGFEVLEERDLALPPAQPWW 441
Score = 53.8 bits (111), Expect(2) = 2e-048
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +1
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 487 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 636
>gb|DT624374.1|DT624374 EST1158649 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD91 5' end, mRNA sequence
Length = 854
Score = 160 bits (344), Expect(2) = 2e-048
Identities = 62/143 (43%), Positives = 90/143 (62%)
Frame = -3 / +1
Query: 1039 SVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDP 860
++ G+ N+YQ+ R + N+ AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+
Sbjct: 1 NIVGITINDYQVERARSHNKKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPEL 180
Query: 859 VGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQA 680
Y EIYRVLKPG+ + YEW T + +N H I IE G+ LP +R+ +Q ++
Sbjct: 181 QDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPEHVEIIHGIEHGDALPGLRNYKQIVEI 360
Query: 679 VKDAGFEVVWDKDLAEDSPLPWY 611
GFEV+ ++DLA PW+
Sbjct: 361 ANSVGFEVLEERDLALPPAQPWW 429
Score = 53.8 bits (111), Expect(2) = 2e-048
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +1
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 475 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 624
>gb|CO370524.1|CO370524 RTK1_68_A09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_A09_A029 5', mRNA sequence
Length = 812
Score = 157 bits (337), Expect(2) = 7e-047
Identities = 62/140 (44%), Positives = 88/140 (62%)
Frame = -3 / +1
Query: 1030 GLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGC 851
G + N+YQ+ R + N+ AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+
Sbjct: 37 GNSINDYQVERARSHNKKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDV 216
Query: 850 YKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKD 671
Y EIYRVLKPG+ + YEW T + +N H I IE G+ LP +R+ +Q ++
Sbjct: 217 YAEIYRVLKPGRLYVTYEWVTTPKFQGDNPEHVEIIHGIEHGDALPGLRNYKQIVEIANS 396
Query: 670 AGFEVVWDKDLAEDSPLPWY 611
GFEV+ ++DLA PW+
Sbjct: 397 VGFEVLEERDLALPPAQPWW 456
Score = 51.9 bits (107), Expect(2) = 7e-047
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = -3 / +1
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + +KPL
Sbjct: 502 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICQKPL 651
>gb|CO198411.1|CO198411 GEO1_13_B02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_13_B02_A029 5', mRNA sequence
Length = 670
Score = 161 bits (347), Expect(2) = 2e-045
Identities = 62/121 (51%), Positives = 78/121 (64%)
Frame = -3 / +2
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
R NY + +YY+LAT YEYGW +SFHF GE +I RHEH+LA +G+KPGM
Sbjct: 263 RTDNYASLTRQYYNLATDLYEYGWSQSFHFCRFAYGEDFNRAIARHEHYLAHNIGIKPGM 442
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKM 926
KVLDVGCG+GGP REI +F+ VTGLN NEYQ+ R G+S F++ DF +
Sbjct: 443 KVLDVGCGVGGPAREIVKFTGAHVTGLNLNEYQVQRATIYAEKEGLSDKLRFIQGDFYEN 622
Query: 925 P 923
P
Sbjct: 623 P 625
Score = 96.4 bits (204), Expect(2) = 1e-024
Identities = 50/93 (53%), Positives = 55/93 (59%)
Frame = +3 / -2
Query: 1011 YSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL 1190
YSL FNPVT +NL IS +GPP P PTS TFIPG P AR CSCR + K SP
Sbjct: 537 YSLRFNPVT*APVNLTISRAGPPTPHPTSSTFIPGLIPML*AR*CSCRAIARLKSSP*AN 358
Query: 1191 *AKWKDSPQPYS*KLVARS*YLLTISV*LDFLA 1289
K KD PYS*+ VAR *Y L *L L+
Sbjct: 357 RQK*KD*DHPYS*RSVARL*YCLVKLA*LSVLS 259
Score = 42.3 bits (86), Expect(2) = 2e-045
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3 / +3
Query: 937 FMKMPFDDNTFDAVYAIEA 881
FMK+PF DN+FDAVYAIEA
Sbjct: 612 FMKIPFPDNSFDAVYAIEA 668
Score = 38.2 bits (77), Expect(2) = 1e-024
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3 / -1
Query: 879 VASMA*TASKVLSSNGIFMKSALTK 953
VAS+A*TASK LS NGIF+K +L K
Sbjct: 670 VASIA*TASKELSGNGIFIKVSLDK 596
>gb|CF387231.1|CF387231 RTDR1_11_H11.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_11_H11_A015 5', mRNA
sequence
Length = 644
Score = 146 bits (313), Expect(2) = 4e-044
Identities = 58/132 (43%), Positives = 82/132 (62%)
Frame = -3 / +2
Query: 1006 ITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVL 827
+ R + N+ AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVL
Sbjct: 2 VERVRSHNKKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVL 181
Query: 826 KPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWD 647
KPG+ + YEW T + +N H I IE G+ LP +R+ +Q ++ GFEV+ +
Sbjct: 182 KPGRLYVTYEWVTTPKFQGDNPEHVEIIHGIEHGDALPGLRNYKQIVEIANSVGFEVLEE 361
Query: 646 KDLAEDSPLPWY 611
+DLA PW+
Sbjct: 362 RDLALPPAQPWW 397
Score = 53.8 bits (111), Expect(2) = 4e-044
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +2
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 443 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 592
>gb|DR014856.1|DR014856 HEAT1_52_B11.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_B11_A029 3', mRNA sequence
Length = 751
Score = 170 bits (365), Expect = 3e-041
Identities = 68/115 (59%), Positives = 89/115 (77%)
Frame = -3 / -1
Query: 730 LGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWYXXXXXXXXXXXXXXLTSVGR 551
LG+GLPDIR+T QC++A+K AGFEV+++++L S +PWY LT++GR
Sbjct: 745 LGDGLPDIRTTNQCIEALKSAGFEVLFEENLTVSSTVPWYDPLDTSHFSLSSFRLTAIGR 566
Query: 550 MITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
+TR MV+ LE++ LAP+GSERVS+FLEKAAEGLV GG+K+IFTPMYFFL RKPL
Sbjct: 565 FLTRNMVRMLEFLRLAPEGSERVSSFLEKAAEGLVAGGRKDIFTPMYFFLARKPL 401
>gb|BQ698117.1|BQ698117 NXPV_064_G03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_064_G03 5' similar to Arabidopsis
thaliana sequence At5g13710 24-sterol C-methyltransferase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 518
Score = 167 bits (360), Expect = 2e-040
Identities = 70/103 (67%), Positives = 76/103 (73%)
Frame = -3 / +3
Query: 1363 INKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 1184
I K ++ +AV+ +RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW
Sbjct: 201 IEKEQMLTAVEEYEKYHMYYGGDEXSRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 380
Query: 1183 NGESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIA 1055
GE+LRESIKRHEHFLALQL P M LDVGCGI LREIA
Sbjct: 381 KGETLRESIKRHEHFLALQLCXXPAMXXLDVGCGIXXXLREIA 509
Score = 120 bits (257), Expect(2) = 2e-027
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3 / -2
Query: 1056 AISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KL 1235
AISLS IP PTS FI G K S RARKCS R +LSR+ SPFHL*AK KDSP PYS*KL
Sbjct: 508 AISLSXXXIPHPTSNXFIAGXKQS*RARKCSWRFILSRRVSPFHL*AK*KDSPHPYS*KL 329
Query: 1236 VARS*YLLTISV*LDFL 1286
VARS*YL T+SV*LDFL
Sbjct: 328 VARS*YLFTMSV*LDFL 278
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3 / -2
Query: 1335 TADLTSTLLIFPPRPEARSSAP 1400
TA + + PP PEA S+AP
Sbjct: 229 TAVSICSFSMLPPIPEAXSNAP 164
>gb|CO370450.1|CO370450 RTK1_68_A09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_A09_A029 3', mRNA sequence
Length = 723
Score = 132 bits (283), Expect(2) = 2e-040
Identities = 52/110 (47%), Positives = 71/110 (64%)
Frame = -3 / +2
Query: 940 DFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNA 761
+F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YEW T + +N
Sbjct: 8 NFLKMPFADNSFDAAYSIEATCHAPELPDVYAEIYRVLKPGRLYVTYEWVTTPKFQGDNP 187
Query: 760 THKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWY 611
H I IE G+ LP +R+ +Q ++ GFEV+ ++DLA PW+
Sbjct: 188 EHVEIIHGIEHGDALPGLRNYKQIVEIANSVGFEVLEERDLALPPVQPWW 337
Score = 54.7 bits (113), Expect(2) = 2e-040
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -3 / +2
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+F + +KPL
Sbjct: 383 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHFMICQKPL 532
>gb|BQ700092.1|BQ700092 NXRV101_B03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV101_B03 5' similar to Arabidopsis thaliana
sequence At1g20330 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 659
Score = 132 bits (283), Expect(2) = 5e-040
Identities = 52/110 (47%), Positives = 71/110 (64%)
Frame = -3 / +2
Query: 940 DFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNA 761
+F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YEW T + +N
Sbjct: 5 NFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNP 184
Query: 760 THKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWY 611
H I IE G+ LP +R+ +Q ++ GFEV+ ++DLA PW+
Sbjct: 185 EHVEIIHGIEHGDALPGLRNYKQIVEIANSVGFEVLEERDLALPPAQPWW 334
Score = 53.8 bits (111), Expect(2) = 5e-040
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3 / +2
Query: 535 MVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
++ L ++G+APQG V L K A+ L GG+ IFTPM+ + RKPL
Sbjct: 380 VIAILSFLGIAPQGVVDVHEMLFKTADYLTRGGETGIFTPMHLMICRKPL 529
>gb|DR167938.1|DR167938 RTPHOS1_22_C11.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_22_C11_A029 3', mRNA sequence
Length = 547
Score = 119 bits (255), Expect(2) = 2e-037
Identities = 50/97 (51%), Positives = 61/97 (62%)
Frame = -3 / +1
Query: 904 DAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELG 725
D Y IEAT HAP VG Y E YRVLKPG F YEW T +YDP + HK IK IE G
Sbjct: 1 DICYEIEATAHAPSKVGVYSEAYRVLKPGGIFVGYEWVFTKNYDPKSEQHKFIKKAIEEG 180
Query: 724 NGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPW 614
+GLPDI A+K++GF V +D+AE++ +PW
Sbjct: 181 DGLPDIAHINDIPVALKESGFVDVEVRDVAEEAQVPW 291
Score = 57.9 bits (120), Expect(2) = 2e-037
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -3 / +1
Query: 565 TSVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKP 389
T +G+ + + A E V LAP+G+ V N L +A EGL GGK ++FTPM F +KP
Sbjct: 337 TPIGKKLIGMALSAAEKVKLAPKGTLGVQNMLLRAQEGLYLGGKLKVFTPMAFHYGKKP 513
>gb|CF672817.1|CF672817 RTCNT1_74_D06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_74_D06_A029 3', mRNA sequence
Length = 678
Score = 110 bits (234), Expect(2) = 6e-036
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = -3 / +2
Query: 868 PDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQC 689
P V YKE++RVLKPG CFA EW +T+ YDPNN H IK I GNGLPDI + +
Sbjct: 47 PQKVVVYKELFRVLKPGACFADVEWVMTNKYDPNNKKHNDIKMGIMKGNGLPDIETVDEV 226
Query: 688 LQAVKDAGFEVVWDKDLA 635
L VK+AGFE+VW +D++
Sbjct: 227 LAQVKEAGFEIVWTEDMS 280
Score = 62.5 bits (130), Expect(2) = 6e-036
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = -3 / +2
Query: 565 TSVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
T +G T MV LE G+AP+G+ S L K A LVE GK IF+P Y ++RKPL
Sbjct: 353 TRLGHWATHAMVSTLECFGVAPKGTVATSTMLMKTAVALVESGKLGIFSPDYLIVMRKPL 532
>gb|BQ701207.1|BQ701207 NXSI_023_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_023_G09 5' similar to Arabidopsis thaliana
sequence At5g13710 24-sterol C-methyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 493
Score = 142 bits (304), Expect = 8e-033
Identities = 58/83 (69%), Positives = 64/83 (77%)
Frame = -3 / +2
Query: 1363 INKVEVKSAVDXXXXXXXXXXXXXEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 1184
I K ++ +AV+ +RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW
Sbjct: 245 IEKEQMLTAVEEYEKYHMYYGGDEXSRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW 424
Query: 1183 NGESLRESIKRHEHFLALQLGLK 1115
GE+LRESIKRHEHFLALQL LK
Sbjct: 425 KGETLRESIKRHEHFLALQLCLK 493
Score = 97.7 bits (207), Expect(2) = 2e-021
Identities = 46/57 (80%), Positives = 49/57 (85%)
Frame = +3 / -2
Query: 1116 FKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 1286
FK S RARKCS R +LSR+ SPFHL*AK KDSP PYS*KLVARS*YL T+SV*LDFL
Sbjct: 492 FKQS*RARKCSWRFILSRRVSPFHL*AK*KDSPHPYS*KLVARS*YLFTMSV*LDFL 322
Score = 25.8 bits (50), Expect(2) = 2e-021
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3 / -2
Query: 1335 TADLTSTLLIFPPRPEARSSAP 1400
TA + + PP PEARS+AP
Sbjct: 273 TAVSICSFSMLPPIPEARSNAP 208
>gb|AW697967.1|AW697967 NXNV_072_H04_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_072_H04 5' similar to Arabidopsis thaliana
sequence At5g13710 24-sterol C-methyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 363
Score = 131 bits (280), Expect = 2e-029
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = -3 / +1
Query: 679 VKDAGFEVVWDKDLAEDSPLPWYXXXXXXXXXXXXXXLTSVGRMITRTMVKALEYVGLAP 500
+K AGFEV+++++L S +PWY LT++GR +TR MV+ LE++ LAP
Sbjct: 1 LKSAGFEVLFEENLTVSSTVPWYDPLDTSHFSLSSFRLTAIGRFLTRNMVRMLEFLRLAP 180
Query: 499 QGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
+ ERVS+FLEKAAEGLV GG+K IFTPMYFFL RKPL
Sbjct: 181 EXXERVSSFLEKAAEGLVAGGRKXIFTPMYFFLARKPL 294
>gb|DR101369.1|DR101369 STRR1_72_A04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_72_A04_A033 5', mRNA sequence
Length = 478
Score = 127 bits (271), Expect = 3e-028
Identities = 46/111 (41%), Positives = 72/111 (64%)
Frame = -3 / +2
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
+ N +V+ +Y+L T YE+GWG+SFHF+ +G+S +E + HE +A L +KPG
Sbjct: 146 KADNVPKLVDTFYNLVTDIYEWGWGQSFHFSPALHGKSHKEETRMHEERVADLLSMKPGD 325
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCD 953
+VLD GCG+GGP+R IA S ++ G+ N+YQ+ R + N+ AG+ C+
Sbjct: 326 RVLDAGCGVGGPMRAIAAHSGANIVGITINDYQVERARSHNKKAGLDRLCE 478
>gb|BQ700488.1|BQ700488 NXRV107_C11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV107_C11 5' similar to Arabidopsis thaliana
sequence At1g20330 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 449
Score = 99.6 bits (211), Expect(2) = 1e-027
Identities = 37/67 (55%), Positives = 47/67 (70%)
Frame = -3 / +2
Query: 976 AGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYE 797
AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YE
Sbjct: 11 AGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYE 190
Query: 796 WCITDHY 776
W T +
Sbjct: 191 WVTTPKF 211
Score = 45.1 bits (92), Expect(2) = 1e-027
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3 / +3
Query: 757 HKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPWY 611
H I IE G+ LP +R+ +Q ++ GFEV+ ++DLA PW+
Sbjct: 231 HVEIIHGIEHGDALPGLRNYKQIVEIANSVGFEVLEERDLAXXPAQPWW 377
>gb|BQ699178.1|BQ699178 NXRV120_E03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV120_E03 5' similar to Arabidopsis thaliana
sequence At1g20330 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 377
Score = 120 bits (256), Expect = 3e-026
Identities = 49/104 (47%), Positives = 63/104 (60%)
Frame = -3 / +3
Query: 925 PFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYDPNNATHKRI 746
PF DN+FDA Y+IEATCHAP Y EIYRVLKPG+ + YEW T + +N H I
Sbjct: 54 PFADNSFDAAYSIEATCHAPXLQDVYAEIYRVLKPGRLYVTYEWVTTPKFHGDNPXHVEI 233
Query: 745 KDEIELGNGLPDIRSTRQCLQAVKDAGFEVVWDKDLAEDSPLPW 614
IE G+ LP +R+ +Q ++ GFEV+ +DLA PW
Sbjct: 234 IHGIEHGDALPGLRNYKQIVEIANSVGFEVLEXRDLALPPAHPW 365
>gb|BX253022.1|BX253022 BX253022 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP076G10, mRNA sequence
Length = 621
Score = 119 bits (255), Expect = 5e-026
Identities = 46/106 (43%), Positives = 68/106 (64%)
Frame = -3 / +3
Query: 1285 RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGM 1106
+ N +V+ +Y+L T YE+GWG+SFHF+ +G+S +E + HE +A L +KPG
Sbjct: 297 KADNVPKLVDTFYNLVTDIYEWGWGQSFHFSPALHGKSHKEETRMHEERVADLLSMKPGD 476
Query: 1105 KVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGI 968
+VLD GCG+GGP+R IA S +V G N+YQ R + N+ AG+
Sbjct: 477 RVLDAGCGVGGPMRAIAAHSGANVVGFTINDYQGERARRHNKKAGL 614
>gb|CO198340.1|CO198340 GEO1_13_B02.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_13_B02_A029 3', mRNA sequence
Length = 647
Score = 67.5 bits (141), Expect(2) = 2e-024
Identities = 25/56 (44%), Positives = 41/56 (73%)
Frame = -3 / +3
Query: 556 GRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKP 389
GR++ ++ ALE +AP+G+ + ++ L +AA+ LVEGGK+++FTPMY + RKP
Sbjct: 303 GRLVMHNVIGALEACWIAPKGTRKTADSLGQAADALVEGGKRKLFTPMYLMVGRKP 470
Score = 66.6 bits (139), Expect(2) = 2e-024
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = -3 / +3
Query: 829 LKPGQCFAVYEWCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQCLQAVKDAGFEVVW 650
LKPG F VYEW +TD+Y+ ++ +RI+ +IE G+G+ + L A++ AGFE++
Sbjct: 3 LKPGGVFGVYEWLMTDNYNNDDLEQRRIRLDIEQGDGIAQMFKIDHGLSAIQAAGFELLH 182
Query: 649 DKDLA 635
+DLA
Sbjct: 183 HEDLA 197
>gb|BM428313.1|BM428313 NXRV_012_C08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_012_C08 5' similar to Arabidopsis thaliana
sequence At1g20330 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 295
Score = 113 bits (241), Expect = 4e-024
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = -3 / +1
Query: 976 AGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYE 797
AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ + YE
Sbjct: 4 AGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYVTYE 183
Query: 796 WCITDHYDPNNATHKRIKDEIELGNGLPDIRSTRQ 692
W T + +N H I IE G+ +R+ +Q
Sbjct: 184 WVTTPKFQGDNXEHVEIIHGIEHGDAXXGLRNYKQ 288
>gb|DR097838.1|DR097838 STRR1_37_H07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_37_H07_A033 3', mRNA sequence
Length = 579
Score = 111 bits (237), Expect = 1e-023
Identities = 44/60 (73%), Positives = 54/60 (90%)
Frame = -3 / -2
Query: 565 TSVGRMITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPL 386
T++GR +TR MV+ LE++ LAP+GSERVS+FLEKAAEGLV GG+K+IFTPMYFFL RKPL
Sbjct: 569 TAIGRFLTRNMVRMLEFLRLAPEGSERVSSFLEKAAEGLVAGGRKDIFTPMYFFLARKPL 390
>gb|BQ700171.1|BQ700171 NXRV102_B01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV102_B01 5' similar to Arabidopsis thaliana
sequence At1g20330 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 269
Score = 103 bits (220), Expect = 3e-021
Identities = 39/70 (55%), Positives = 49/70 (70%)
Frame = -3 / +1
Query: 985 NRLAGISGTCDFVKADFMKMPFDDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFA 806
NR AG+ C+ V +F+KMPF DN+FDA Y+IEATCHAP+ Y EIYRVLKPG+ +
Sbjct: 10 NRKAGLDRLCEVVCGNFLKMPFADNSFDAAYSIEATCHAPELQDVYAEIYRVLKPGRLYV 189
Query: 805 VYEWCITDHY 776
YEW T +
Sbjct: 190 TYEWVTTPKF 219
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 869,341,747
Number of Sequences: 355925
Number of extensions: 13997697
Number of successful extensions: 68042
Number of sequences better than 1.0e-020: 59
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 25751604780
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)