TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404858.2.1
(958 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV032541.1|CV032541 RTNACL1_8_G10.g1_A029 Roots plus add... 67 1e-039
gb|CF479481.1|CF479481 RTWW3_22_E07.g1_A022 Well-watered lo... 63 3e-039
gb|DR079160.1|DR079160 RTFEPL1_9_B01.g1_A029 Roots plus add... 63 5e-039
gb|CO200100.1|CO200100 GEO2_5_A04.g1_A032 Root gravitropism... 63 5e-039
gb|CF401853.1|CF401853 RTWW1_15_G05.g1_A015 Well-watered lo... 69 6e-039
gb|DR386779.1|DR386779 RTHG1_17_H07.b1_A029 Roots plus adde... 63 1e-038
gb|CO172267.1|CO172267 NDL1_28_C10.g1_A029 Needles control ... 62 1e-038
gb|CO170645.1|CO170645 NDL1_15_G04.g1_A029 Needles control ... 62 1e-038
gb|DR092503.1|DR092503 STRR1_1_F08.g1_A033 Stem Response Re... 63 2e-038
gb|DR069528.1|DR069528 RTDK1_7_F10.g1_A029 Roots, dark Pinu... 67 2e-038
gb|DR096182.1|DR096182 STRR1_26_G07.b1_A033 Stem Response R... 68 2e-038
gb|DR016741.1|DR016741 STRS1_11_H07.g1_A034 Shoot tip pitch... 66 3e-038
gb|CV036407.1|CV036407 RTNACL1_59_C04.b1_A029 Roots plus ad... 66 3e-038
gb|DR016909.1|DR016909 STRS1_12_H07.g1_A034 Shoot tip pitch... 66 3e-038
gb|DR101585.1|DR101585 STRR1_74_H08.b1_A033 Stem Response R... 66 4e-038
gb|CV032305.1|CV032305 RTNACL1_7_E11.b1_A029 Roots plus add... 68 4e-038
gb|DR384247.1|DR384247 RTHG1_1_B07.b1_A029 Roots plus added... 63 6e-038
gb|CV036480.1|CV036480 RTNACL1_59_C04.g1_A029 Roots plus ad... 66 2e-037
gb|DR022130.1|DR022130 STRS1_49_C03.b1_A034 Shoot tip pitch... 68 2e-037
gb|DR090596.1|DR090596 RTAL1_16_D11.b1_A029 Roots plus adde... 72 3e-037
gb|CO158694.1|CO158694 FLD1_8_D01.g1_A029 Root flooded Pinu... 69 3e-037
gb|DR021065.1|DR021065 STRS1_42_D06.b1_A034 Shoot tip pitch... 68 4e-037
gb|DR016499.1|DR016499 STRS1_10_B04.g1_A034 Shoot tip pitch... 66 5e-037
gb|CO363443.1|CO363443 RTK1_9_F08.g1_A029 Roots minus potas... 65 5e-037
gb|CO200019.1|CO200019 GEO2_5_A04.b1_A032 Root gravitropism... 63 7e-037
gb|DR112029.1|DR112029 RTS1_25_H03.b1_A029 Roots minus sulf... 66 7e-037
gb|DR181968.1|DR181968 RTMNUT1_42_D02.b1_A029 Roots minus m... 127 1e-036
gb|DR078833.1|DR078833 RTFEPL1_7_D07.b1_A029 Roots plus add... 127 1e-036
gb|DR182052.1|DR182052 RTMNUT1_42_D02.g1_A029 Roots minus m... 127 1e-036
gb|DR163899.1|DR163899 RTFE1_45_D04.g1_A029 Roots minus iro... 127 1e-036
gb|DR088948.1|DR088948 RTAL1_5_D08.g1_A029 Roots plus added... 127 1e-036
gb|CF385097.1|CF385097 RTDR1_1_A09.g1_A015 Loblolly pine ro... 127 1e-036
gb|CF402277.1|CF402277 RTWW1_19_H09.g1_A015 Well-watered lo... 127 1e-036
gb|DR058444.1|DR058444 RTNIT1_11_G06.g1_A029 Roots minus ni... 127 1e-036
gb|DR181370.1|DR181370 RTMNUT1_38_B03.g2_A029 Roots minus m... 127 1e-036
gb|CF387208.1|CF387208 RTDR1_11_A03.g1_A015 Loblolly pine r... 127 2e-036
gb|DR057648.1|DR057648 RTNIT1_7_B06.b1_A029 Roots minus nit... 126 3e-036
gb|DR743685.1|DR743685 RTCU1_17_C02.g1_A029 Roots plus adde... 127 4e-036
gb|CV033509.1|CV033509 RTNACL1_35_A08.b1_A029 Roots plus ad... 127 4e-036
gb|DR096264.1|DR096264 STRR1_26_G07.g1_A033 Stem Response R... 68 2e-035
gb|DR742204.1|DR742204 RTCU1_2_B03.g1_A029 Roots plus added... 127 7e-035
gb|CF385521.1|CF385521 RTDR1_4_C11.g1_A015 Loblolly pine ro... 127 1e-034
gb|DN446164.1|DN446164 EST941963 Sequencing ESTs from loblo... 86 3e-034
gb|DT625981.1|DT625981 EST1157905 Sequencing ESTs from lobl... 86 5e-034
gb|CO413999.1|CO413999 EST844384 Sequencing ESTs from loblo... 86 5e-034
gb|DN447561.1|DN447561 EST943360 Sequencing ESTs from loblo... 86 5e-034
gb|DR050766.1|DR050766 RTBOR1_25_C04.g1_A029 Roots plus add... 63 8e-034
gb|DR057948.1|DR057948 RTNIT1_8_F07.g1_A029 Roots minus nit... 60 8e-034
gb|CO370297.1|CO370297 RTK1_67_A09.b1_A029 Roots minus pota... 63 8e-034
gb|CO200088.1|CO200088 GEO2_5_G12.b1_A032 Root gravitropism... 63 8e-034
gb|DR111095.1|DR111095 RTS1_15_E12.b1_A029 Roots minus sulf... 63 8e-034
gb|CF389435.1|CF389435 RTDR2_7_D02.g1_A021 Loblolly pine ro... 63 8e-034
gb|CO363359.1|CO363359 RTK1_9_F08.b1_A029 Roots minus potas... 65 1e-033
gb|CF390625.1|CF390625 RTDR2_20_F04.g1_A021 Loblolly pine r... 63 1e-033
gb|CO174881.1|CO174881 NDL1_46_H02.g1_A029 Needles control ... 62 1e-033
gb|CX652138.1|CX652138 COLD1_57_E02.b1_A029 Root cold Pinus... 53 2e-033
gb|CX648223.1|CX648223 COLD1_27_G06.b1_A029 Root cold Pinus... 65 2e-033
gb|DR060865.1|DR060865 RTNIT1_30_B09.g1_A029 Roots minus ni... 63 4e-033
gb|CO409072.1|CO409072 EST839457 Sequencing ESTs from loblo... 86 4e-033
gb|CO364003.1|CO364003 RTK1_13_C10.b1_A029 Roots minus pota... 65 5e-033
gb|CO168970.1|CO168970 NDL1_3_G01.g1_A029 Needles control P... 64 7e-033
gb|DR159768.1|DR159768 RTFE1_1_A05.g1_A029 Roots minus iron... 66 2e-032
gb|DR089483.1|DR089483 RTAL1_9_B01.b1_A029 Roots plus added... 127 2e-032
gb|DR179154.1|DR179154 RTMNUT1_16_G08.b1_A029 Roots minus m... 113 3e-032
gb|DR181295.1|DR181295 RTMNUT1_38_B03.b2_A029 Roots minus m... 113 3e-032
gb|DR388738.1|DR388738 RTHG1_30_E06.b1_A029 Roots plus adde... 113 3e-032
gb|CV036197.1|CV036197 RTNACL1_57_H11.b1_A029 Roots plus ad... 113 3e-032
gb|DR078907.1|DR078907 RTFEPL1_7_D07.g1_A029 Roots plus add... 112 4e-032
gb|DR092416.1|DR092416 STRR1_1_F08.b1_A033 Stem Response Re... 63 4e-032
gb|CF387199.1|CF387199 RTDR1_11_F05.g1_A015 Loblolly pine r... 127 7e-032
gb|CO365814.1|CO365814 RTK1_19_H09.b1_A029 Roots minus pota... 128 7e-032
gb|CF387738.1|CF387738 RTDR1_19_B05.g1_A015 Loblolly pine r... 127 7e-032
gb|DR743617.1|DR743617 RTCU1_17_C02.b1_A029 Roots plus adde... 113 1e-031
gb|CF395373.1|CF395373 RTDS2_11_D01.b1_A021 Drought-stresse... 69 2e-031
gb|CX714776.1|CX714776 RTPQ1_26_E06.g1_A032 Roots treated w... 67 4e-031
gb|DR014779.1|DR014779 HEAT1_51_C11.g1_A029 Root at 37 C fo... 70 6e-031
gb|DR051228.1|DR051228 RTBOR1_28_C04.g1_A029 Roots plus add... 63 6e-031
gb|DR161057.1|DR161057 RTFE1_9_C11.g1_A029 Roots minus iron... 70 6e-031
gb|CV033139.1|CV033139 RTNACL1_20_D02.g1_A029 Roots plus ad... 63 6e-031
gb|DR742224.1|DR742224 RTCU1_2_D01.g1_A029 Roots plus added... 63 6e-031
gb|DR050496.1|DR050496 RTBOR1_23_H08.g1_A029 Roots plus add... 63 6e-031
gb|DT636699.1|DT636699 EST1151630 Normalized pine embryo li... 63 9e-031
gb|CO367110.1|CO367110 RTK1_32_E12.b1_A029 Roots minus pota... 95 1e-030
gb|CV035051.1|CV035051 RTNACL1_13_G03.b1_A029 Roots plus ad... 67 1e-030
gb|DR069438.1|DR069438 RTDK1_7_F10.b1_A029 Roots, dark Pinu... 67 1e-030
gb|CO367187.1|CO367187 RTK1_32_E12.g1_A029 Roots minus pota... 95 1e-030
gb|CF397483.1|CF397483 RTDS3_3_B05.g1_A022 Drought-stressed... 67 1e-030
gb|CF399221.1|CF399221 RTDS3_27_G05.b1_A022 Drought-stresse... 67 2e-030
gb|CO166933.1|CO166933 FLD1_65_C05.g1_A029 Root flooded Pin... 69 2e-030
gb|DR742375.1|DR742375 RTCU1_3_D02.g2_A029 Roots plus added... 63 2e-030
gb|DR058361.1|DR058361 RTNIT1_11_G12.b1_A029 Roots minus ni... 106 2e-030
gb|CO176070.1|CO176070 NDL1_59_A09.g1_A029 Needles control ... 52 2e-030
gb|DT624502.1|DT624502 EST1158789 Sequencing ESTs from lobl... 86 3e-030
gb|CX649157.1|CX649157 COLD1_33_G12.b1_A029 Root cold Pinus... 57 4e-030
gb|CF475375.1|CF475375 RTWW2_13_G10.g1_A021 Well-watered lo... 63 6e-030
gb|DR057860.1|DR057860 RTNIT1_8_F07.b1_A029 Roots minus nit... 61 7e-030
gb|CF389408.1|CF389408 RTDR2_7_D02.b1_A021 Loblolly pine ro... 63 7e-030
gb|DR090193.1|DR090193 RTAL1_13_G06.b1_A029 Roots plus adde... 63 7e-030
gb|DT631534.1|DT631534 EST1146465 Normalized pine embryo li... 52 8e-030
gb|DR072809.1|DR072809 RTDK1_28_F01.g1_A029 Roots, dark Pin... 69 1e-029
gb|DR099239.1|DR099239 STRR1_54_D04.b1_A033 Stem Response R... 66 2e-029
gb|DR018019.1|DR018019 STRS1_20_B02.b1_A034 Shoot tip pitch... 66 2e-029
gb|DR016422.1|DR016422 STRS1_10_B04.b1_A034 Shoot tip pitch... 66 3e-029
gb|DR093618.1|DR093618 STRR1_9_H07.b1_A033 Stem Response Re... 66 3e-029
gb|DR081773.1|DR081773 RTFEPL1_32_E02.b1_A029 Roots plus ad... 67 3e-029
gb|CF400596.1|CF400596 RTWW1_6_F01.g1_A015 Well-watered lob... 102 4e-029
gb|CF473291.1|CF473291 RTWW2_1_D11.g1_A021 Well-watered lob... 65 5e-029
gb|CF387216.1|CF387216 RTDR1_11_G01.g1_A015 Loblolly pine r... 127 8e-029
gb|CF388365.1|CF388365 RTDR2_2_H08.g1_A021 Loblolly pine ro... 127 8e-029
gb|CF391226.1|CF391226 RTDR3_4_B07.g1_A022 Loblolly pine ro... 127 8e-029
gb|CF402750.1|CF402750 RTWW1_22_H01.g1_A015 Well-watered lo... 127 8e-029
gb|CF471464.1|CF471464 RTDS1_3_B01.g1_A015 Drought-stressed... 127 8e-029
gb|CV036263.1|CV036263 RTNACL1_57_H11.g1_A029 Roots plus ad... 127 8e-029
gb|DR053823.1|DR053823 RTCA1_13_C03.g1_A029 Roots minus cal... 127 8e-029
gb|DR179233.1|DR179233 RTMNUT1_16_G08.g1_A029 Roots minus m... 127 8e-029
gb|DR058916.1|DR058916 RTNIT1_14_D09.g1_A029 Roots minus ni... 127 1e-028
gb|CO201685.1|CO201685 RTCNT2_7_A08.g1_A029 Root control 2 ... 65 2e-028
gb|CF400634.1|CF400634 RTWW1_6_G01.g1_A015 Well-watered lob... 100 4e-028
gb|CX647418.1|CX647418 COLD1_16_E12.b1_A029 Root cold Pinus... 63 2e-027
gb|DR018800.1|DR018800 STRS1_25_F10.g1_A034 Shoot tip pitch... 68 3e-027
gb|DR745597.1|DR745597 RTCU1_30_F12.g1_A029 Roots plus adde... 68 3e-027
gb|DR022846.1|DR022846 STRS1_53_H02.g1_A034 Shoot tip pitch... 68 3e-027
gb|CX715235.1|CX715235 RTPQ1_32_E11.g1_A032 Roots treated w... 63 3e-027
gb|CF396189.1|CF396189 RTDS2_15_H11.g1_A021 Drought-stresse... 52 4e-027
gb|DR019214.1|DR019214 STRS1_28_B10.g1_A034 Shoot tip pitch... 66 5e-027
gb|DR079085.1|DR079085 RTFEPL1_9_B01.b1_A029 Roots plus add... 63 6e-027
gb|CO200029.1|CO200029 GEO2_5_B04.b1_A032 Root gravitropism... 63 6e-027
gb|CX712493.1|CX712493 RTPQ1_2_G11.g2_A032 Roots treated wi... 63 6e-027
gb|CO200175.1|CO200175 GEO2_5_G12.g1_A032 Root gravitropism... 63 7e-027
gb|DR111152.1|DR111152 RTS1_15_E12.g1_A029 Roots minus sulf... 63 7e-027
gb|DR058244.1|DR058244 RTNIT1_10_D11.g1_A029 Roots minus ni... 66 7e-027
gb|DR050422.1|DR050422 RTBOR1_23_H08.b1_A029 Roots plus add... 63 7e-027
gb|CV031655.1|CV031655 RTNACL1_2_H05.g1_A029 Roots plus add... 63 7e-027
gb|CF387232.1|CF387232 RTDR1_11_C09.g1_A015 Loblolly pine r... 63 7e-027
gb|CF400161.1|CF400161 RTWW1_3_H09.g1_A015 Well-watered lob... 63 7e-027
gb|CF385822.1|CF385822 RTDR1_6_B10.g1_A015 Loblolly pine ro... 63 7e-027
gb|CF402882.1|CF402882 RTWW1_23_C07.g1_A015 Well-watered lo... 63 7e-027
gb|CF478525.1|CF478525 RTWW3_20_C04.g1_A022 Well-watered lo... 63 7e-027
gb|CF474770.1|CF474770 RTWW2_7_D07.g1_A021 Well-watered lob... 63 7e-027
gb|CF401702.1|CF401702 RTWW1_14_F02.g1_A015 Well-watered lo... 63 7e-027
gb|CF386779.1|CF386779 RTDR1_16_C09.g1_A015 Loblolly pine r... 63 7e-027
gb|CF477607.1|CF477607 RTWW3_8_E05.g1_A022 Well-watered lob... 63 7e-027
gb|CF477216.1|CF477216 RTWW3_6_F07.g1_A022 Well-watered lob... 63 7e-027
gb|CF478690.1|CF478690 RTWW3_16_E10.g1_A022 Well-watered lo... 63 7e-027
gb|CF386305.1|CF386305 RTDR1_13_C02.g1_A015 Loblolly pine r... 63 7e-027
gb|CF401147.1|CF401147 RTWW1_10_H05.g1_A015 Well-watered lo... 63 7e-027
gb|CO198810.1|CO198810 GEO1_16_F03.g1_A029 Root gravitropis... 63 7e-027
gb|DN447717.1|DN447717 EST943516 Sequencing ESTs from loblo... 86 9e-027
gb|DR093702.1|DR093702 STRR1_9_H07.g1_A033 Stem Response Re... 66 9e-027
gb|CF390585.1|CF390585 RTDR2_20_F04.b1_A021 Loblolly pine r... 63 9e-027
gb|DR168457.1|DR168457 RTPHOS1_25_C08.g1_A029 Roots minus p... 63 9e-027
gb|DT635168.1|DT635168 EST1150099 Normalized pine embryo li... 62 1e-026
gb|DR688709.1|DR688709 EST1078794 Normalized pine embryo li... 62 1e-026
gb|CF402929.1|CF402929 RTWW1_23_A11.g1_A015 Well-watered lo... 69 1e-026
gb|DR168384.1|DR168384 RTPHOS1_25_C08.b1_A029 Roots minus p... 62 1e-026
gb|CF387399.1|CF387399 RTDR1_12_D01.g1_A015 Loblolly pine r... 69 1e-026
gb|CF395414.1|CF395414 RTDS2_11_D01.g1_A021 Drought-stresse... 69 1e-026
gb|CF395697.1|CF395697 RTDS2_16_E10.g1_A021 Drought-stresse... 62 1e-026
gb|CF386022.1|CF386022 RTDR1_7_D01.g1_A015 Loblolly pine ro... 62 1e-026
gb|CF475645.1|CF475645 RTWW2_11_A07.g1_A021 Well-watered lo... 62 1e-026
gb|CF477289.1|CF477289 RTWW3_6_C04.g1_A022 Well-watered lob... 62 1e-026
gb|DR118559.1|DR118559 RTMG1_17_F10.g1_A029 Roots minus mag... 58 1e-026
gb|CF479675.1|CF479675 RTWW3_11_E11.g1_A022 Well-watered lo... 62 1e-026
gb|CF393796.1|CF393796 RTDS2_1_A09.g1_A021 Drought-stressed... 62 1e-026
gb|CF402305.1|CF402305 RTWW1_19_D12.g1_A015 Well-watered lo... 69 1e-026
gb|CO173794.1|CO173794 NDL1_39_H04.b1_A029 Needles control ... 63 2e-026
gb|CF668355.1|CF668355 RTCNT1_36_B02.b1_A029 Root control P... 62 2e-026
gb|CF398688.1|CF398688 RTDS3_13_E09.g1_A022 Drought-stresse... 66 2e-026
gb|CO200850.1|CO200850 RTCNT2_2_A11.b1_A029 Root control 2 ... 57 2e-026
gb|CO174700.1|CO174700 NDL1_45_E10.g1_A029 Needles control ... 64 2e-026
gb|CF402897.1|CF402897 RTWW1_23_G03.g1_A015 Well-watered lo... 68 2e-026
gb|CO173859.1|CO173859 NDL1_39_H04.g1_A029 Needles control ... 63 2e-026
gb|CX652210.1|CX652210 COLD1_57_E02.g1_A029 Root cold Pinus... 53 2e-026
gb|CF479430.1|CF479430 RTWW3_22_E07.b1_A022 Well-watered lo... 63 3e-026
gb|DR020715.1|DR020715 STRS1_38_G06.g1_A034 Shoot tip pitch... 66 3e-026
gb|DR053744.1|DR053744 RTCA1_13_C03.b1_A029 Roots minus cal... 93 4e-026
gb|CF664334.1|CF664334 RTCNT1_9_D05.b1_A029 Root control Pi... 93 4e-026
gb|CF388275.1|CF388275 RTDR2_2_H08.b1_A021 Loblolly pine ro... 93 4e-026
gb|DR110044.1|DR110044 RTS1_7_C01.b1_A029 Roots minus sulfu... 93 4e-026
gb|CO364083.1|CO364083 RTK1_13_C10.g1_A029 Roots minus pota... 65 6e-026
gb|DR743660.1|DR743660 RTCU1_17_H06.b1_A029 Roots plus adde... 67 8e-026
gb|CF397352.1|CF397352 RTDS3_3_B05.b2_A022 Drought-stressed... 67 8e-026
gb|CF392562.1|CF392562 RTDR3_6_C05.g1_A022 Loblolly pine ro... 67 8e-026
gb|DR386863.1|DR386863 RTHG1_17_H07.g1_A029 Roots plus adde... 59 1e-025
gb|CX648309.1|CX648309 COLD1_27_G06.g1_A029 Root cold Pinus... 65 2e-025
gb|DR024032.1|DR024032 STRS1_61_G01.g1_A034 Shoot tip pitch... 59 2e-025
gb|CX647421.1|CX647421 COLD1_16_F04.b1_A029 Root cold Pinus... 68 2e-025
gb|CV034552.1|CV034552 RTNACL1_9_H12.g1_A029 Roots plus add... 65 3e-025
gb|CF399303.1|CF399303 RTDS3_27_G05.g1_A022 Drought-stresse... 65 3e-025
gb|DR094700.1|DR094700 STRR1_16_E07.b1_A033 Stem Response R... 59 4e-025
gb|DT635992.1|DT635992 EST1150923 Normalized pine embryo li... 57 5e-025
gb|CF387750.1|CF387750 RTDR1_19_B06.g1_A015 Loblolly pine r... 57 5e-025
gb|DR384323.1|DR384323 RTHG1_1_B07.g1_A029 Roots plus added... 59 7e-025
gb|DR099996.1|DR099996 STRR1_60_F05.g1_A033 Stem Response R... 57 9e-025
gb|CF387173.1|CF387173 RTDR1_11_F05.b1_A015 Loblolly pine r... 87 2e-024
gb|CO173029.1|CO173029 NDL1_33_C02.g1_A029 Needles control ... 57 2e-024
gb|CF387124.1|CF387124 RTDR1_11_C09.b1_A015 Loblolly pine r... 63 2e-024
gb|CF479735.1|CF479735 RTWW3_11_C12.g1_A022 Well-watered lo... 63 2e-024
gb|DR687863.1|DR687863 EST1077946 Normalized pine embryo li... 59 2e-024
gb|CF668437.1|CF668437 RTCNT1_36_B02.g1_A029 Root control P... 62 2e-024
gb|DR386301.1|DR386301 RTHG1_14_E12.b1_A029 Roots plus adde... 63 3e-024
gb|CF395842.1|CF395842 RTDS2_17_A02.g1_A021 Drought-stresse... 61 4e-024
gb|DR160268.1|DR160268 RTFE1_5_B07.b1_A029 Roots minus iron... 90 6e-024
gb|CF664416.1|CF664416 RTCNT1_9_D05.g1_A029 Root control Pi... 73 6e-024
gb|DT634605.1|DT634605 EST1149536 Normalized pine embryo li... 57 6e-024
gb|CX649229.1|CX649229 COLD1_33_G12.g1_A029 Root cold Pinus... 53 1e-023
gb|CV031628.1|CV031628 RTNACL1_2_F02.g1_A029 Roots plus add... 53 1e-023
gb|CV035131.1|CV035131 RTNACL1_13_G03.g1_A029 Roots plus ad... 59 1e-023
gb|CO409603.1|CO409603 EST839988 Sequencing ESTs from loblo... 86 1e-023
gb|DR021146.1|DR021146 STRS1_42_D06.g1_A034 Shoot tip pitch... 62 2e-023
gb|CF386518.1|CF386518 RTDR1_15_B09.b1_A015 Loblolly pine r... 69 2e-023
gb|CF399969.1|CF399969 RTWW1_2_A06.b1_A015 Well-watered lob... 109 3e-023
gb|DR683582.1|DR683582 EST1073658 Normalized pine embryo li... 51 4e-023
gb|CX647479.1|CX647479 COLD1_16_E12.g1_A029 Root cold Pinus... 51 4e-023
gb|DR018098.1|DR018098 STRS1_20_B02.g1_A034 Shoot tip pitch... 54 4e-023
gb|CO161978.1|CO161978 FLD1_32_H10.b1_A029 Root flooded Pin... 83 4e-023
gb|DR743995.1|DR743995 RTCU1_19_C02.g1_A029 Roots plus adde... 57 5e-023
gb|CF400078.1|CF400078 RTWW1_3_H09.b1_A015 Well-watered lob... 63 1e-022
gb|DR113001.1|DR113001 RTS1_32_F04.b1_A029 Roots minus sulf... 67 1e-022
gb|DR049633.1|DR049633 RTBOR1_18_B06.b1_A029 Roots plus add... 67 1e-022
gb|CX712480.1|CX712480 RTPQ1_2_F09.g2_A032 Roots treated wi... 51 1e-022
gb|DR058829.1|DR058829 RTNIT1_14_D09.b1_A029 Roots minus ni... 81 1e-022
gb|CO197125.1|CO197125 GEO1_4_C01.b1_A029 Root gravitropism... 63 4e-021
gb|CO162051.1|CO162051 FLD1_32_H10.g1_A029 Root flooded Pin... 76 4e-021
gb|DR181274.1|DR181274 RTMNUT1_37_H06.g2_A029 Roots minus m... 53 1e-020
>gb|CV032541.1|CV032541 RTNACL1_8_G10.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_G10_A029 5', mRNA sequence
Length = 811
Score = 67.0 bits (140), Expect(4) = 1e-039
Identities = 31/78 (39%), Positives = 42/78 (53%)
Frame = +1 / +2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A+V LT+N AAELG++GIRVN VSP+GVAT
Sbjct: 314 RKKGCIISTSSLASIVGGSAPYSYTASKHAVVGLTKNGAAELGKYGIRVNAVSPSGVATL 493
Query: 445 LTMRYMGLEAEALEQAME 498
++ M ++L E
Sbjct: 494 FAVKQMRGGTDSLSPVSE 547
Score = 60.2 bits (125), Expect(4) = 1e-039
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V D+A A +LASD+A+Y+SGHNL VDGG +V N S G
Sbjct: 608 LKVEDIAEAGLYLASDEAKYVSGHNLVVDGGTTVVNHSWG 727
Score = 47.3 bits (97), Expect(4) = 1e-039
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1 / +2
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
++ A+ + A+YVHCDV+ E +G LDIM+NNAG++
Sbjct: 50 KILAESLSPPATYVHCDVSKEHDISSVVDLAMEKYGQLDIMYNNAGIN 193
Score = 45.5 bits (93), Expect(4) = 1e-039
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1 / +2
Query: 163 VRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
V E +++V++VN+ G LG KHAARVM+P ++G
Sbjct: 215 VEEYDMEQYDKVMSVNVRGVMLGIKHAARVMIPRKKG 325
>gb|CF479481.1|CF479481 RTWW3_22_E07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_22_E07_A022 5', mRNA sequence
Length = 767
Score = 62.9 bits (131), Expect(4) = 3e-039
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT+N AAELG++GIRVN VSP+ VATP
Sbjct: 297 RKKGSIISTSSLASIVGGSAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATP 476
Query: 445 LTMRYM 462
T M
Sbjct: 477 FTAMMM 494
Score = 59.7 bits (124), Expect(4) = 3e-039
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V DVA A +LA D+A+Y+SGHNL VDGG +V N S G
Sbjct: 588 LKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHSXG 707
Score = 51.0 bits (105), Expect(4) = 3e-039
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E +++RV++VN+ G LG KHAARVM+P ++G I
Sbjct: 195 SVAEYDMVEYDRVMSVNVRGVMLGIKHAARVMIPRKKGSII 317
Score = 45.1 bits (92), Expect(4) = 3e-039
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 28 AASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
+A+YVHCDV+ E G LDIM+NNAG++
Sbjct: 60 SATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGIN 176
>gb|DR079160.1|DR079160 RTFEPL1_9_B01.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_B01_A029 5', mRNA sequence
Length = 894
Score = 62.9 bits (131), Expect(4) = 5e-039
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / -1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT+N AAELG++GIRVN VSP+ VATP
Sbjct: 591 RKKGSIISTSSLASIVGGSAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATP 412
Query: 445 LTMRYM 462
T M
Sbjct: 411 FTAMMM 394
Score = 58.8 bits (122), Expect(4) = 5e-039
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V DVA A +LA D+A+Y+SGHNL VDGG +V N S G
Sbjct: 300 LKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHSWG 181
Score = 51.0 bits (105), Expect(4) = 5e-039
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / -1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E +++RV++VN+ G LG KHAARVM+P ++G I
Sbjct: 693 SVAEYDMVEYDRVMSVNVRGVMLGIKHAARVMIPRKKGSII 571
Score = 45.1 bits (92), Expect(4) = 5e-039
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 28 AASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
+A+YVHCDV+ E G LDIM+NNAG++
Sbjct: 828 SATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGIN 712
>gb|CO200100.1|CO200100 GEO2_5_A04.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_A04_A032 5', mRNA sequence
Length = 868
Score = 62.9 bits (131), Expect(4) = 5e-039
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / -1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT+N AAELG++GIRVN VSP+ VATP
Sbjct: 628 RKKGSIISTSSLASIVGGSAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATP 449
Query: 445 LTMRYM 462
T M
Sbjct: 448 FTAMMM 431
Score = 58.8 bits (122), Expect(4) = 5e-039
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V DVA A +LA D+A+Y+SGHNL VDGG +V N S G
Sbjct: 337 LKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHSWG 218
Score = 51.0 bits (105), Expect(4) = 5e-039
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / -1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E +++RV++VN+ G LG KHAARVM+P ++G I
Sbjct: 730 SVAEYDMVEYDRVMSVNVRGVMLGIKHAARVMIPRKKGSII 608
Score = 45.1 bits (92), Expect(4) = 5e-039
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 28 AASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
+A+YVHCDV+ E G LDIM+NNAG++
Sbjct: 865 SATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGIN 749
>gb|CF401853.1|CF401853 RTWW1_15_G05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_15_G05_A015 5', mRNA sequence
Length = 749
Score = 69.3 bits (145), Expect(4) = 6e-039
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+NAAAELG++GIRVN VSP VAT
Sbjct: 241 RKKGCIISIASTGGVVAGMATHAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATA 420
Query: 445 LTMRY 459
LT+R+
Sbjct: 421 LTVRF 435
Score = 60.2 bits (125), Expect(4) = 6e-039
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ DVA A FLASD+A+Y+SGHNL VDGG +V N S G
Sbjct: 529 LKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRG 648
Score = 46.4 bits (95), Expect(4) = 6e-039
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1 / +1
Query: 163 VRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
V E F+RV++VN+ G +G KHAARVM+P ++G
Sbjct: 142 VAEYDMEQFDRVMSVNVRGVMVGIKHAARVMIPRKKG 252
Score = 41.4 bits (84), Expect(4) = 6e-039
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGV 141
A+YV CDV+ E + LDIMFNNAG+
Sbjct: 4 ATYVRCDVSKEQDVSAAVDLAMEKYAQLDIMFNNAGI 114
>gb|DR386779.1|DR386779 RTHG1_17_H07.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_H07_A029 3', mRNA sequence
Length = 829
Score = 62.9 bits (131), Expect(4) = 1e-038
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTGT 651
L DVA A +LASD+++Y+SGHNL VDGGISV N S GT
Sbjct: 517 LTAEDVAEACLYLASDESKYVSGHNLVVDGGISVVNHSWGT 639
Score = 58.8 bits (122), Expect(4) = 1e-038
Identities = 28/71 (39%), Positives = 37/71 (52%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT N AAELG++GIRVN VSP G+ T
Sbjct: 223 RKKGTIINTASIASVIGGFCPYDYTTSKHAVIGLTRNGAAELGKYGIRVNAVSPYGLPTD 402
Query: 445 LTMRYMGLEAE 477
LT+ Y E +
Sbjct: 403 LTVGYFKKEGD 435
Score = 47.8 bits (98), Expect(4) = 1e-038
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E F+RV+ VN+ G +G KHAARVM+P ++G I
Sbjct: 121 SVAEYDMDQFDRVIRVNMRGVMVGMKHAARVMIPRKKGTII 243
Score = 46.9 bits (96), Expect(4) = 1e-038
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +1 / +1
Query: 37 YVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGP 150
+VHCDVT+E G LDIMFNNAG+ P
Sbjct: 1 FVHCDVTNEQDVGAAVYLTVEKHGQLDIMFNNAGIGAP 114
>gb|CO172267.1|CO172267 NDL1_28_C10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_28_C10_A029 5', mRNA sequence
Length = 782
Score = 62.0 bits (129), Expect(4) = 1e-038
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1 / +2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ L +N AAELG++GIRVN VSP+G+AT
Sbjct: 290 RKKGTIISTASVASIIGASAPYAYTASKHAIIGLVKNGAAELGKYGIRVNAVSPSGMATA 469
Query: 445 LTMRYM 462
L + Y+
Sbjct: 470 LVVNYL 487
Score = 61.1 bits (127), Expect(4) = 1e-038
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+V DVA A +LASD+A+Y+SGHNL VDGGI+V N S
Sbjct: 578 LKVEDVAEAGLYLASDEAKYVSGHNLVVDGGITVVNHS 691
Score = 48.7 bits (100), Expect(4) = 1e-038
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / +2
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E F+RV+ VN+ G LG KHAARVM+P ++G I
Sbjct: 188 SVAEYEVEQFDRVMRVNVRGTMLGIKHAARVMIPRKKGTII 310
Score = 44.6 bits (91), Expect(4) = 1e-038
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1 / +2
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAG 138
R A+ + AA+++HCDV+ E G LDIMFNNAG
Sbjct: 26 RTLAESLSPAATFLHCDVSKEEDMSAAVDLAIEKHGQLDIMFNNAG 163
>gb|CO170645.1|CO170645 NDL1_15_G04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_15_G04_A029 5', mRNA sequence
Length = 762
Score = 62.0 bits (129), Expect(4) = 1e-038
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ L +N AAELG++GIRVN VSP+G+AT
Sbjct: 288 RKKGTIISTASVASIIGASAPYAYTASKHAIIGLVKNGAAELGKYGIRVNAVSPSGMATA 467
Query: 445 LTMRYM 462
L + Y+
Sbjct: 468 LVVNYL 485
Score = 61.1 bits (127), Expect(4) = 1e-038
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+V DVA A +LASD+A+Y+SGHNL VDGGI+V N S
Sbjct: 576 LKVEDVAEAGLYLASDEAKYVSGHNLVVDGGITVVNHS 689
Score = 48.7 bits (100), Expect(4) = 1e-038
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E F+RV+ VN+ G LG KHAARVM+P ++G I
Sbjct: 186 SVAEYEVEQFDRVMRVNVRGTMLGIKHAARVMIPRKKGTII 308
Score = 44.6 bits (91), Expect(4) = 1e-038
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1 / +3
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAG 138
R A+ + AA+++HCDV+ E G LDIMFNNAG
Sbjct: 24 RTLAESLSPAATFLHCDVSKEEDMSAAVDLAIEKHGQLDIMFNNAG 161
>gb|DR092503.1|DR092503 STRR1_1_F08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F08_A033 5', mRNA sequence
Length = 909
Score = 63.4 bits (132), Expect(4) = 2e-038
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / +2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSP VAT
Sbjct: 443 RKKGCIISTASGASIIGGSTPYAYTASKHAIIGLTKNGAAELGKYGIRVNAVSPYAVATA 622
Query: 445 LTMRYM 462
L Y+
Sbjct: 623 LINMYL 640
Score = 58.8 bits (122), Expect(4) = 2e-038
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+A+Y+SGHNL VDGG SV N S
Sbjct: 731 LKAEDVAEAGLYLASDEAKYVSGHNLVVDGGFSVVNHS 844
Score = 48.7 bits (100), Expect(4) = 2e-038
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / +2
Query: 151 ACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
A SV E F+RV+ VN+ G LG KHAARVM+P ++G
Sbjct: 332 AVESVAEYKMEQFDRVMRVNVRGVMLGIKHAARVMIPRKKG 454
Score = 45.1 bits (92), Expect(4) = 2e-038
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAG 138
A+YVHCDVT E G LDIM+NNAG
Sbjct: 209 ATYVHCDVTKEEDISAAVDLAMEKHGQLDIMYNNAG 316
>gb|DR069528.1|DR069528 RTDK1_7_F10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_F10_A029 5', mRNA sequence
Length = 898
Score = 67.0 bits (140), Expect(4) = 2e-038
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSPAGVAT
Sbjct: 426 RKKGCIISTSSLASIVGGSAPYSYTASKHAVIGLTKNGAAELGKYGIRVNAVSPAGVATL 605
Query: 445 LTMRYM 462
++ M
Sbjct: 606 FAVKQM 623
Score = 60.6 bits (126), Expect(4) = 2e-038
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V D+A A +LAS++A+Y+SGHNL VDGGISV N S G
Sbjct: 720 LQVEDLAEAGLYLASEEAKYVSGHNLVVDGGISVVNHSWG 839
Score = 45.5 bits (93), Expect(4) = 2e-038
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1 / +3
Query: 163 VRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
V E ++RV+ VN+ G LG KHAARVM+P ++G
Sbjct: 327 VEEYDMEQYDRVMNVNVRGVMLGIKHAARVMIPRKKG 437
Score = 42.8 bits (87), Expect(4) = 2e-038
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1 / +3
Query: 28 AASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
+A+Y HCDV+ E G LDIM+NNAG++
Sbjct: 189 SATYAHCDVSKEQDVKAVVDLAIEKHGQLDIMYNNAGIN 305
>gb|DR096182.1|DR096182 STRR1_26_G07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_G07_A033 3', mRNA sequence
Length = 782
Score = 68.0 bits (142), Expect(4) = 2e-038
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1 / +2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+NAAAELG++GIRVN VSP GVAT
Sbjct: 257 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATA 436
Query: 445 LTMRY 459
L ++Y
Sbjct: 437 LAVQY 451
Score = 55.6 bits (115), Expect(4) = 2e-038
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LA D+++Y+SGHNL VDGG +V N S G
Sbjct: 545 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHSWG 664
Score = 46.9 bits (96), Expect(4) = 2e-038
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1 / +2
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
L A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 8 LSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTN 136
Score = 45.5 bits (93), Expect(4) = 2e-038
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +2
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 155 SVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKG 268
>gb|DR016741.1|DR016741 STRS1_11_H07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_H07_A034 5', mRNA sequence
Length = 888
Score = 65.7 bits (137), Expect(4) = 3e-038
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIR+N VSP GVAT
Sbjct: 312 RKKGCIISTTSVAGILGGAAPYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATA 491
Query: 445 LTMRY 459
L ++Y
Sbjct: 492 LAVQY 506
Score = 55.6 bits (115), Expect(4) = 3e-038
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LA D+++Y+SGHNL VDGG +V N S G
Sbjct: 600 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHSWG 719
Score = 48.3 bits (99), Expect(4) = 3e-038
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1 / +3
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
++ L +A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 48 KLAESLSPASATYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTN 191
Score = 45.5 bits (93), Expect(4) = 3e-038
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 210 SVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKG 323
>gb|CV036407.1|CV036407 RTNACL1_59_C04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_C04_A029 3', mRNA sequence
Length = 836
Score = 66.1 bits (138), Expect(4) = 3e-038
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSP GVAT
Sbjct: 288 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATA 467
Query: 445 LTMRY 459
L ++Y
Sbjct: 468 LAVQY 482
Score = 57.4 bits (119), Expect(4) = 3e-038
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LASD+++Y+SGHNL VDGG +V N S G
Sbjct: 576 LKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVNHSWG 695
Score = 46.9 bits (96), Expect(4) = 3e-038
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1 / +3
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
L A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 39 LSPAVATYVHCDVSKEXDVSAAVDVAMDKYGQLDIMYNNAGTN 167
Score = 44.6 bits (91), Expect(4) = 3e-038
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 186 SVVEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKG 299
>gb|DR016909.1|DR016909 STRS1_12_H07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_12_H07_A034 5', mRNA sequence
Length = 766
Score = 65.7 bits (137), Expect(4) = 3e-038
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIR+N VSP GVAT
Sbjct: 265 RKKGCIISTTSVAGILGGAAPYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATA 444
Query: 445 LTMRY 459
L ++Y
Sbjct: 445 LAVQY 459
Score = 55.6 bits (115), Expect(4) = 3e-038
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LA D+++Y+SGHNL VDGG +V N S G
Sbjct: 553 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHSWG 672
Score = 48.3 bits (99), Expect(4) = 3e-038
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1 / +1
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
++ L +A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 1 KLAESLSPASATYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTN 144
Score = 45.5 bits (93), Expect(4) = 3e-038
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 163 SVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKG 276
>gb|DR101585.1|DR101585 STRR1_74_H08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_H08_A033 3', mRNA sequence
Length = 828
Score = 66.1 bits (138), Expect(4) = 4e-038
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1 / +2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSP GVAT
Sbjct: 263 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATA 442
Query: 445 LTMRY 459
L ++Y
Sbjct: 443 LAVQY 457
Score = 55.6 bits (115), Expect(4) = 4e-038
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LA D+++Y+SGHNL VDGG +V N S G
Sbjct: 551 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHSWG 670
Score = 46.9 bits (96), Expect(4) = 4e-038
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1 / +2
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
L A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 14 LSPAVATYVHCDVSKEEDVSAAVDVAIEKYGQLDIMYNNAGTN 142
Score = 46.0 bits (94), Expect(4) = 4e-038
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +2
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 161 SVEEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKG 274
>gb|CV032305.1|CV032305 RTNACL1_7_E11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_E11_A029 3', mRNA sequence
Length = 770
Score = 68.0 bits (142), Expect(4) = 4e-038
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+NAAAELG++GIRVN VSP GVAT
Sbjct: 235 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATA 414
Query: 445 LTMRY 459
L ++Y
Sbjct: 415 LAVQY 429
Score = 55.6 bits (115), Expect(4) = 4e-038
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LA D+++Y+SGHNL VDGG +V N S G
Sbjct: 523 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHSWG 642
Score = 45.5 bits (93), Expect(4) = 4e-038
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 133 SVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKG 246
Score = 45.5 bits (93), Expect(4) = 4e-038
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 1 ATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTN 114
>gb|DR384247.1|DR384247 RTHG1_1_B07.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_B07_A029 3', mRNA sequence
Length = 806
Score = 62.9 bits (131), Expect(4) = 6e-038
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTGT 651
L DVA A +LASD+++Y+SGHNL VDGGISV N S GT
Sbjct: 522 LTAEDVAEACLYLASDESKYVSGHNLVVDGGISVVNHSWGT 644
Score = 58.8 bits (122), Expect(4) = 6e-038
Identities = 28/71 (39%), Positives = 37/71 (52%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT N AAELG++GIRVN VSP G+ T
Sbjct: 228 RKKGTIINTASIASVIGGFCPYDYTTSKHAVIGLTRNGAAELGKYGIRVNAVSPYGLPTD 407
Query: 445 LTMRYMGLEAE 477
LT+ Y E +
Sbjct: 408 LTVGYFKKEGD 440
Score = 47.3 bits (97), Expect(4) = 6e-038
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E F+RV+ VN+ G +G KHAARVM+P ++G I
Sbjct: 126 SVAEYDMDQFDRVIRVNVRGVMVGMKHAARVMIPRKKGTII 248
Score = 45.1 bits (92), Expect(4) = 6e-038
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1 / +3
Query: 37 YVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGP 150
+VHC+VT+E G LDIMFNNAG+ P
Sbjct: 6 FVHCEVTNEQDVGAAVDLTVEKHGQLDIMFNNAGIGAP 119
>gb|CV036480.1|CV036480 RTNACL1_59_C04.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_C04_A029 5', mRNA sequence
Length = 847
Score = 66.1 bits (138), Expect(4) = 2e-037
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1 / +2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSP GVAT
Sbjct: 452 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATA 631
Query: 445 LTMRY 459
L ++Y
Sbjct: 632 LAVQY 646
Score = 54.7 bits (113), Expect(4) = 2e-037
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVAN 636
L+ D+A A +LASD+++Y+SGHNL VDGG +V N
Sbjct: 740 LKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVN 847
Score = 46.9 bits (96), Expect(4) = 2e-037
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1 / +2
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
L A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 203 LSPAVATYVHCDVSKEKDVSAAVDVAMDKYGQLDIMYNNAGTN 331
Score = 44.6 bits (91), Expect(4) = 2e-037
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +2
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 350 SVVEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKG 463
>gb|DR022130.1|DR022130 STRS1_49_C03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_C03_A034 3', mRNA sequence
Length = 791
Score = 68.0 bits (142), Expect(4) = 2e-037
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+NAAAELG++GIRVN VSP GVAT
Sbjct: 231 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATA 410
Query: 445 LTMRY 459
L ++Y
Sbjct: 411 LAVQY 425
Score = 55.6 bits (115), Expect(4) = 2e-037
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LA D+++Y+SGHNL VDGG +V N S G
Sbjct: 519 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHSWG 638
Score = 45.5 bits (93), Expect(4) = 2e-037
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 129 SVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKG 242
Score = 43.2 bits (88), Expect(4) = 2e-037
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1 / +3
Query: 37 YVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
YVHCDV+ E +G LDIM+NNAG +
Sbjct: 3 YVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTN 110
>gb|DR090596.1|DR090596 RTAL1_16_D11.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_D11_A029 3', mRNA sequence
Length = 809
Score = 71.6 bits (150), Expect(4) = 3e-037
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +1 / -2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSPAGVATP
Sbjct: 382 RKKGCIISASSLASIVGGSAPYSYTASKHAVIGLTKNGAAELGKYGIRVNAVSPAGVATP 203
Query: 445 LTMRYM 462
T + +
Sbjct: 202 FTAKLL 185
Score = 48.3 bits (99), Expect(4) = 3e-037
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVD 615
L+V DVA A +LASD+A+YISGHNL VD
Sbjct: 88 LKVEDVAEAGLYLASDEAKYISGHNLVVD 2
Score = 46.0 bits (94), Expect(4) = 3e-037
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1 / -2
Query: 163 VRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
V E ++RV++VN+ G LG KHAARVM+P ++G
Sbjct: 481 VEEYDMEAYDRVMSVNVRGVMLGIKHAARVMIPRKKG 371
Score = 46.0 bits (94), Expect(4) = 3e-037
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1 / -2
Query: 28 AASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
+A+Y HCDV+ E +G LDIM+NNAG+S
Sbjct: 619 SATYAHCDVSKEEDIRAVVDMTMEKYGQLDIMYNNAGIS 503
>gb|CO158694.1|CO158694 FLD1_8_D01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_D01_A029 5', mRNA sequence
Length = 714
Score = 69.3 bits (145), Expect(4) = 3e-037
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1 / -2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+NAAAELG++GIRVN VSP VAT
Sbjct: 485 RKKGCIISIASTGGVVAGMATHAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATA 306
Query: 445 LTMRY 459
LT+R+
Sbjct: 305 LTVRF 291
Score = 60.2 bits (125), Expect(4) = 3e-037
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ DVA A FLASD+A+Y+SGHNL VDGG +V N S G
Sbjct: 197 LKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRG 78
Score = 46.4 bits (95), Expect(4) = 3e-037
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1 / -2
Query: 163 VRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
V E F+RV++VN+ G +G KHAARVM+P ++G
Sbjct: 584 VAEYDMEQFDRVMSVNVRGVMVGIKHAARVMIPRKKG 474
Score = 35.9 bits (72), Expect(4) = 3e-037
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1 / -2
Query: 40 VHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGV 141
V CDV+ E + LDIMFNNAG+
Sbjct: 713 VRCDVSKEQDVSAAVDLAMEKYAQLDIMFNNAGI 612
>gb|DR021065.1|DR021065 STRS1_42_D06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_D06_A034 3', mRNA sequence
Length = 844
Score = 68.0 bits (142), Expect(4) = 4e-037
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +1 / +3
Query: 274 GCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
GCII +K A++ LT+N AAELG++GIRVN VSP G+ATPL++
Sbjct: 240 GCIISTASIAGMVGGFAPYSYTASKHAIIGLTKNGAAELGKYGIRVNVVSPYGLATPLSV 419
Query: 454 RYM 462
+Y+
Sbjct: 420 QYL 428
Score = 60.2 bits (125), Expect(4) = 4e-037
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTGT 651
L V DVA A +LASD+A+Y+SGHNL VDGGI+V N S T
Sbjct: 528 LTVEDVAEAGLYLASDEAKYVSGHNLVVDGGITVVNHSWRT 650
Score = 41.8 bits (85), Expect(4) = 4e-037
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1 / +3
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAG 138
A+YVHCDV+ E G +DIM+NNAG
Sbjct: 3 ATYVHCDVSKEEEVSAAVDLAMEKHGQVDIMYNNAG 110
Score = 41.4 bits (84), Expect(4) = 4e-037
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+ V+ +N+ G LG K+AARVM+P ++G
Sbjct: 129 SVAEYDMEQFDGVMKINVRGVMLGIKYAARVMIPWKKG 242
>gb|DR016499.1|DR016499 STRS1_10_B04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_B04_A034 5', mRNA sequence
Length = 937
Score = 65.7 bits (137), Expect(4) = 5e-037
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIR+N VSP GVAT
Sbjct: 538 RKKGCIISTTSVAGILGGAAPYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATA 717
Query: 445 LTMRY 459
L ++Y
Sbjct: 718 LAVQY 732
Score = 52.8 bits (109), Expect(4) = 5e-037
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVAN 636
L+ D+A A +LA D+++Y+SGHNL VDGG +V N
Sbjct: 826 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVN 933
Score = 46.9 bits (96), Expect(4) = 5e-037
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1 / +1
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
++ L +A+YVHCDV E +G LDIM+NNAG +
Sbjct: 274 KLAESLSPASATYVHCDVGKEEDVSAAVDLAMDKYGQLDIMYNNAGTN 417
Score = 45.5 bits (93), Expect(4) = 5e-037
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 436 SVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKG 549
>gb|CO363443.1|CO363443 RTK1_9_F08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_9_F08_A029 5', mRNA sequence
Length = 835
Score = 64.8 bits (135), Expect(4) = 5e-037
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSPA VAT
Sbjct: 448 RKKGCIISTASIAGIVGGLCPYAYTASKHAIIGLTKNGAAELGKYGIRVNAVSPAAVATT 627
Query: 445 LTMRYM 462
L Y+
Sbjct: 628 LLNNYL 645
Score = 55.1 bits (114), Expect(4) = 5e-037
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 517 GVGALRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
G L+ D+A A +LASD+A+Y+SGHNL VDGG+S
Sbjct: 724 GGATLKADDIAEAGLYLASDEAKYVSGHNLVVDGGVS 834
Score = 48.7 bits (100), Expect(4) = 5e-037
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G LG KHAARVM+P ++G
Sbjct: 346 SVAEYDMEQFDRVMRVNVRGVMLGIKHAARVMIPRKKG 459
Score = 42.3 bits (86), Expect(4) = 5e-037
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAG 138
A+YVHCDV+ E G LDIM+NNAG
Sbjct: 214 ATYVHCDVSKEEDISTAVDLAMEKKGQLDIMYNNAG 321
>gb|CO200019.1|CO200019 GEO2_5_A04.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_A04_A032 3', mRNA sequence
Length = 906
Score = 62.9 bits (131), Expect(4) = 7e-037
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / -3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT+N AAELG++GIRVN VSP+ VATP
Sbjct: 385 RKKGSIISTSSLASIVGGSAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATP 206
Query: 445 LTMRYM 462
T M
Sbjct: 205 FTAMMM 188
Score = 51.5 bits (106), Expect(4) = 7e-037
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGG 621
L+V DVA A +LA D+A+Y+SGHNL VDGG
Sbjct: 94 LKVEDVAEAGLYLAGDEAKYVSGHNLVVDGG 2
Score = 51.0 bits (105), Expect(4) = 7e-037
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / -3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E +++RV++VN+ G LG KHAARVM+P ++G I
Sbjct: 487 SVAEYDMVEYDRVMSVNVRGVMLGIKHAARVMIPRKKGSII 365
Score = 45.1 bits (92), Expect(4) = 7e-037
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 28 AASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
+A+YVHCDV+ E G LDIM+NNAG++
Sbjct: 622 SATYVHCDVSKEEDISTVVDLAMEKHGQLDIMYNNAGIN 506
>gb|DR112029.1|DR112029 RTS1_25_H03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_25_H03_A029 3', mRNA sequence
Length = 808
Score = 66.1 bits (138), Expect(4) = 7e-037
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+N AAELG++GIRVN VSP GVAT
Sbjct: 289 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATA 468
Query: 445 LTMRY 459
L ++Y
Sbjct: 469 LAVQY 483
Score = 55.6 bits (115), Expect(4) = 7e-037
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+ D+A A +LA D+++Y+SGHNL VDGG +V N S G
Sbjct: 577 LKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHSWG 696
Score = 46.0 bits (94), Expect(4) = 7e-037
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 187 SVEEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKG 300
Score = 42.8 bits (87), Expect(4) = 7e-037
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1 / +1
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
L A+YV CDV+ E +G LDIM+NNAG +
Sbjct: 40 LSPAVATYVDCDVSKEEDVSAAVDVAIEKYGQLDIMYNNAGTN 168
>gb|DR181968.1|DR181968 RTMNUT1_42_D02.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_42_D02_A029 3', mRNA sequence
Length = 889
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +3
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 96 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 275
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 276 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 455
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 456 AQHGIRVNCVSPAGVPTPMLIDAM 527
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 606 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 704
>gb|DR078833.1|DR078833 RTFEPL1_7_D07.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_7_D07_A029 3', mRNA sequence
Length = 868
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / -2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 684 ACYFHCDVSKETDVSALVDYTVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 505
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 504 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 325
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 324 AQHGIRVNCVSPAGVPTPMLIDAM 253
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 174 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 76
>gb|DR182052.1|DR182052 RTMNUT1_42_D02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_42_D02_A029 5', mRNA sequence
Length = 854
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 155 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 334
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 335 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 514
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 515 AQHGIRVNCVSPAGVPTPMLIDAM 586
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 665 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 763
>gb|DR163899.1|DR163899 RTFE1_45_D04.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_45_D04_A029 5', mRNA sequence
Length = 852
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 161 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 340
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 341 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 520
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 521 AQHGIRVNCVSPAGVPTPMLIDAM 592
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 671 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 769
>gb|DR088948.1|DR088948 RTAL1_5_D08.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_5_D08_A029 5', mRNA sequence
Length = 821
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +3
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 138 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 317
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 318 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 497
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 498 AQHGIRVNCVSPAGVPTPMLIDAM 569
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 648 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 746
>gb|CF385097.1|CF385097 RTDR1_1_A09.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_1_A09_A015 5', mRNA
sequence
Length = 798
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 115 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 294
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 295 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 474
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 475 AQHGIRVNCVSPAGVPTPMLIDAM 546
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 625 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 723
>gb|CF402277.1|CF402277 RTWW1_19_H09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_19_H09_A015 5', mRNA sequence
Length = 782
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 92 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 271
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 272 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 451
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 452 AQHGIRVNCVSPAGVPTPMLIDAM 523
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 602 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 700
>gb|DR058444.1|DR058444 RTNIT1_11_G06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_11_G06_A029 5', mRNA sequence
Length = 765
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 137 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 316
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 317 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 496
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 497 AQHGIRVNCVSPAGVPTPMLIDAM 568
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 647 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 745
>gb|DR181370.1|DR181370 RTMNUT1_38_B03.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_B03_A029 5', mRNA sequence
Length = 734
Score = 127 bits (273), Expect(2) = 1e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 118 ACYFHCDVSKETDVSALVDYTVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 297
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 298 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 477
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 478 AQHGIRVNCVSPAGVPTPMLIDAM 549
Score = 46.0 bits (94), Expect(2) = 1e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 628 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 726
>gb|CF387208.1|CF387208 RTDR1_11_A03.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_A03_A015 5', mRNA
sequence
Length = 762
Score = 127 bits (273), Expect(2) = 2e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 158 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 337
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 338 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 517
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 518 AQHGIRVNCVSPAGVPTPMLIDAM 589
Score = 45.5 bits (93), Expect(2) = 2e-036
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDG 618
L DVA + FL SDDARYISG NL +DG
Sbjct: 668 LEAIDVAKSALFLCSDDARYISGQNLVIDG 757
>gb|DR057648.1|DR057648 RTNIT1_7_B06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_7_B06_A029 3', mRNA sequence
Length = 831
Score = 126 bits (270), Expect(2) = 3e-036
Identities = 56/142 (39%), Positives = 79/142 (55%)
Frame = +1 / +2
Query: 37 YVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVNLV 216
Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN+
Sbjct: 2 YFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVNVR 181
Query: 217 GPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQ 396
G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L Q
Sbjct: 182 GAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDLAQ 361
Query: 397 HGIRVNCVSPAGVATPLTMRYM 462
HGIRVNCVSPAGV TP+ + M
Sbjct: 362 HGIRVNCVSPAGVPTPMLIDAM 427
Score = 46.0 bits (94), Expect(2) = 3e-036
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG NL +DG +
Sbjct: 506 LEAIDVAKSALFLCSDDARYISGQNLVIDGAFT 604
>gb|DR743685.1|DR743685 RTCU1_17_C02.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_17_C02_A029 5', mRNA sequence
Length = 900
Score = 127 bits (273), Expect(2) = 4e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 152 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 331
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 332 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 511
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 512 AQHGIRVNCVSPAGVPTPMLIDAM 583
Score = 44.1 bits (90), Expect(2) = 4e-036
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG N +DG +
Sbjct: 662 LEAIDVAKSALFLCSDDARYISGQNFVIDGAFT 760
>gb|CV033509.1|CV033509 RTNACL1_35_A08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_A08_A029 3', mRNA sequence
Length = 891
Score = 127 bits (273), Expect(2) = 4e-036
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 103 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 282
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 283 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 462
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 463 AQHGIRVNCVSPAGVPTPMLIDAM 534
Score = 44.1 bits (90), Expect(2) = 4e-036
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGIS 627
L DVA + FL SDDARYISG N +DG +
Sbjct: 613 LEAIDVAKSALFLCSDDARYISGQNFVIDGAFT 711
>gb|DR096264.1|DR096264 STRR1_26_G07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_G07_A033 5', mRNA sequence
Length = 788
Score = 68.0 bits (142), Expect(4) = 2e-035
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ GCII +K A++ LT+NAAAELG++GIRVN VSP GVAT
Sbjct: 409 RKKGCIISTTSVAGILGGAAPYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATA 588
Query: 445 LTMRY 459
L ++Y
Sbjct: 589 LAVQY 603
Score = 46.9 bits (96), Expect(4) = 2e-035
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1 / +1
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVS 144
L A+YVHCDV+ E +G LDIM+NNAG +
Sbjct: 160 LSPAVATYVHCDVSKEEDVSAAVDVAIDKYGQLDIMYNNAGTN 288
Score = 45.5 bits (93), Expect(4) = 2e-035
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G G KHAARVM+P ++G
Sbjct: 307 SVAEYDMEQFDRVINVNVKGVMHGIKHAARVMIPRKKG 420
Score = 45.1 bits (92), Expect(4) = 2e-035
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDG 618
L+ D+A A +LA D+++Y+SGHNL VDG
Sbjct: 697 LKAEDIAEAGLYLAGDESKYVSGHNLVVDG 786
>gb|DR742204.1|DR742204 RTCU1_2_B03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_B03_A029 5', mRNA sequence
Length = 748
Score = 127 bits (273), Expect(2) = 7e-035
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +3
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 153 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 332
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 333 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 512
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 513 AQHGIRVNCVSPAGVPTPMLIDAM 584
Score = 40.0 bits (81), Expect(2) = 7e-035
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFV 612
L DVA + FL SDDARYISG NL +
Sbjct: 663 LEAIDVAKSALFLCSDDARYISGQNLVI 746
>gb|CF385521.1|CF385521 RTDR1_4_C11.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_4_C11_A015 5', mRNA
sequence
Length = 728
Score = 127 bits (273), Expect(2) = 1e-034
Identities = 57/144 (39%), Positives = 80/144 (55%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A Y HCDV+ E G LDIMF+NAG+ G S+ + DFERV++VN
Sbjct: 139 ACYFHCDVSKETDVSALVDYAVEKHGHLDIMFSNAGIPGGLFSSMADVTLDDFERVMSVN 318
Query: 211 LVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAEL 390
+ G +L TKHAAR M+ ++ G ++ +K A++ + ++AA +L
Sbjct: 319 VRGAYLCTKHAARAMIGAKTRGSVVMTCSMASVMAMPNGPSYTASKHAVLGIMKSAAIDL 498
Query: 391 GQHGIRVNCVSPAGVATPLTMRYM 462
QHGIRVNCVSPAGV TP+ + M
Sbjct: 499 AQHGIRVNCVSPAGVPTPMLIDAM 570
Score = 39.1 bits (79), Expect(2) = 1e-034
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNL 606
L DVA + FL SDDARYISG NL
Sbjct: 649 LEAIDVAKSALFLCSDDARYISGQNL 726
>gb|DN446164.1|DN446164 EST941963 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBE63 5' end, mRNA sequence
Length = 943
Score = 85.8 bits (181), Expect(3) = 3e-034
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
+ ++HCDVT E G LDIM+NNAG+ GP + E DF+ V+ +N
Sbjct: 319 SDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLLSHIAEMDMKDFDTVMNIN 498
Query: 211 LVGPFLGTKHAARVMVPSRRG 273
+ G LG KHAA+VMVP ++G
Sbjct: 499 VRGIVLGMKHAAKVMVPRKQG 561
Score = 53.8 bits (111), Expect(3) = 3e-034
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1 / +1
Query: 535 VHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
V D+A A +LAS+D RYI+GHNL VDGG SV S
Sbjct: 832 VKDIARAALYLASEDGRYITGHNLVVDGGFSVMKHS 939
Score = 44.1 bits (90), Expect(3) = 3e-034
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1 / +1
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
+K A+ L ++ A EL ++GIRVNC+SP +ATP +
Sbjct: 628 SKFAIPGLVKSVAGELCKYGIRVNCISPYAIATPFAL 738
>gb|DT625981.1|DT625981 EST1157905 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA578 5' end, mRNA sequence
Length = 960
Score = 85.8 bits (181), Expect(3) = 5e-034
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1 / +2
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
+ ++HCDVT E G LDIM+NNAG+ GP + E DF+ V+ +N
Sbjct: 248 SDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLLSHIAEMDMKDFDTVMNIN 427
Query: 211 LVGPFLGTKHAARVMVPSRRG 273
+ G LG KHAA+VMVP ++G
Sbjct: 428 VRGIVLGMKHAAKVMVPRKQG 490
Score = 53.3 bits (110), Expect(3) = 5e-034
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1 / +2
Query: 535 VHDVAAAVRFLASDDARYISGHNLFVDGGISV 630
V D+A A +LAS+D RYI+GHNL VDGG SV
Sbjct: 761 VKDIARAALYLASEDGRYITGHNLVVDGGFSV 856
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1 / +2
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
+K A+ L ++ A EL ++GIRVNC+SP +ATP +
Sbjct: 557 SKFAIPGLVKSVAGELCKYGIRVNCISPYAIATPFAL 667
>gb|CO413999.1|CO413999 EST844384 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMI36 5' end, mRNA sequence
Length = 954
Score = 85.8 bits (181), Expect(3) = 5e-034
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
+ ++HCDVT E G LDIM+NNAG+ GP + E DF+ V+ +N
Sbjct: 286 SDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLLSHIAEMDMKDFDTVMNIN 465
Query: 211 LVGPFLGTKHAARVMVPSRRG 273
+ G LG KHAA+VMVP ++G
Sbjct: 466 VRGIVLGMKHAAKVMVPRKQG 528
Score = 53.3 bits (110), Expect(3) = 5e-034
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 535 VHDVAAAVRFLASDDARYISGHNLFVDGGISV 630
V D+A A +LAS+D RYI+GHNL VDGG SV
Sbjct: 799 VKDIARAALYLASEDGRYITGHNLVVDGGFSV 894
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1 / +1
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
+K A+ L ++ A EL ++GIRVNC+SP +ATP +
Sbjct: 595 SKFAIPGLVKSVAGELCKYGIRVNCISPYAIATPFAL 705
>gb|DN447561.1|DN447561 EST943360 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBU34 5' end, mRNA sequence
Length = 953
Score = 85.8 bits (181), Expect(3) = 5e-034
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
+ ++HCDVT E G LDIM+NNAG+ GP + E DF+ V+ +N
Sbjct: 286 SDFIHCDVTQEEQVEEAVNQTISKHGQLDIMYNNAGIPGPLLSHIAEMDMKDFDTVMNIN 465
Query: 211 LVGPFLGTKHAARVMVPSRRG 273
+ G LG KHAA+VMVP ++G
Sbjct: 466 VRGIVLGMKHAAKVMVPRKQG 528
Score = 53.3 bits (110), Expect(3) = 5e-034
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 535 VHDVAAAVRFLASDDARYISGHNLFVDGGISV 630
V D+A A +LAS+D RYI+GHNL VDGG SV
Sbjct: 799 VKDIARAALYLASEDGRYITGHNLVVDGGFSV 894
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1 / +1
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
+K A+ L ++ A EL ++GIRVNC+SP +ATP +
Sbjct: 595 SKFAIPGLVKSVAGELCKYGIRVNCISPYAIATPFAL 705
>gb|DR050766.1|DR050766 RTBOR1_25_C04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_C04_A029 5', mRNA sequence
Length = 874
Score = 62.9 bits (131), Expect(4) = 8e-034
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / -3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT+N AAELG++GIRVN VSP+ VATP
Sbjct: 659 RKKGSIISTSSLASIVGGSAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATP 480
Query: 445 LTMRYM 462
T M
Sbjct: 479 FTAMMM 462
Score = 58.8 bits (122), Expect(4) = 8e-034
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V DVA A +LA D+A+Y+SGHNL VDGG +V N S G
Sbjct: 368 LKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHSWG 249
Score = 51.0 bits (105), Expect(4) = 8e-034
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / -3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E +++RV++VN+ G LG KHAARVM+P ++G I
Sbjct: 761 SVAEYDMVEYDRVMSVNVRGVMLGIKHAARVMIPRKKGSII 639
Score = 27.2 bits (53), Expect(4) = 8e-034
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 106 GALDIMFNNAGVS 144
G LDIM+NNAG++
Sbjct: 818 GQLDIMYNNAGIN 780
>gb|DR057948.1|DR057948 RTNIT1_8_F07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_F07_A029 5', mRNA sequence
Length = 872
Score = 59.7 bits (124), Expect(4) = 8e-034
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +1 / +1
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYM 462
+K A++ LT+NAAAELG++GIRVN VSPA VAT L Y+
Sbjct: 571 SKHAIIGLTKNAAAELGKYGIRVNAVSPAAVATTLLNNYL 690
Score = 49.2 bits (101), Expect(4) = 8e-034
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / +1
Query: 517 GVGALRVHDVAAAVRFLASDDARYISGHNLFVDG 618
G L+ D+A A +LASD+A+Y+SGHNL VDG
Sbjct: 769 GGATLKADDIAEAGLYLASDEAKYVSGHNLVVDG 870
Score = 48.7 bits (100), Expect(4) = 8e-034
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
SV E F+RV+ VN+ G LG KHAARVM+P ++G
Sbjct: 394 SVAEYDMEQFDRVMRVNVRGVMLGIKHAARVMIPRKKG 507
Score = 42.3 bits (86), Expect(4) = 8e-034
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / +1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAG 138
A+YVHCDV+ E G LDIM+NNAG
Sbjct: 262 ATYVHCDVSKEEDISTAVDLAMEKKGQLDIMYNNAG 369
>gb|CO370297.1|CO370297 RTK1_67_A09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_A09_A029 3', mRNA sequence
Length = 832
Score = 62.9 bits (131), Expect(4) = 8e-034
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / +2
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT+N AAELG++GIRVN VSP+ VATP
Sbjct: 215 RKKGSIISTSSLASIVGGSAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATP 394
Query: 445 LTMRYM 462
T M
Sbjct: 395 FTAMMM 412
Score = 58.8 bits (122), Expect(4) = 8e-034
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V DVA A +LA D+A+Y+SGHNL VDGG +V N S G
Sbjct: 506 LKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHSWG 625
Score = 51.0 bits (105), Expect(4) = 8e-034
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / +2
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E +++RV++VN+ G LG KHAARVM+P ++G I
Sbjct: 113 SVAEYDMVEYDRVMSVNVRGVMLGIKHAARVMIPRKKGSII 235
Score = 27.2 bits (53), Expect(4) = 8e-034
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 106 GALDIMFNNAGVS 144
G LDIM+NNAG++
Sbjct: 56 GQLDIMYNNAGIN 94
>gb|CO200088.1|CO200088 GEO2_5_G12.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_G12_A032 3', mRNA sequence
Length = 815
Score = 62.9 bits (131), Expect(4) = 8e-034
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1 / +1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
R+ G II +K A++ LT+N AAELG++GIRVN VSP+ VATP
Sbjct: 175 RKKGSIISTSSLASIVGGSAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATP 354
Query: 445 LTMRYM 462
T M
Sbjct: 355 FTAMMM 372
Score = 58.8 bits (122), Expect(4) = 8e-034
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
L+V DVA A +LA D+A+Y+SGHNL VDGG +V N S G
Sbjct: 466 LKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHSWG 585
Score = 51.0 bits (105), Expect(4) = 8e-034
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / +1
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
SV E +++RV++VN+ G LG KHAARVM+P ++G I
Sbjct: 73 SVAEYDMVEYDRVMSVNVRGVMLGIKHAARVMIPRKKGSII 195
Score = 27.2 bits (53), Expect(4) = 8e-034
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 106 GALDIMFNNAGVS 144
G LDIM+NNAG++
Sbjct: 16 GQLDIMYNNAGIN 54
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 386,900,036
Number of Sequences: 355925
Number of extensions: 4844012
Number of successful extensions: 39825
Number of sequences better than 1.0e-020: 236
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 14193855800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)