TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192701.2.2
(654 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW011366.1|AW011366 ST19H10 Pine TriplEx shoot tip libra... 146 2e-034
gb|AW042959.1|AW042959 ST27E10 Pine TriplEx shoot tip libra... 146 2e-034
gb|BX681680.1|BX681680 BX681680 RS Pinus pinaster cDNA clon... 146 2e-034
gb|DR099897.1|DR099897 STRR1_59_E05.g1_A033 Stem Response R... 146 2e-034
gb|BX249133.1|BX249133 BX249133 Pinus pinaster differenciat... 133 1e-030
gb|BX250252.1|BX250252 BX250252 Pinus pinaster differenciat... 133 1e-030
gb|AW225859.1|AW225859 ST72E12 Pine TriplEx shoot tip libra... 130 1e-029
gb|AW064560.1|AW064560 ST33A07 Pine TriplEx shoot tip libra... 106 1e-029
gb|AW226116.1|AW226116 ST77E06 Pine TriplEx shoot tip libra... 129 1e-029
gb|AW042801.1|AW042801 ST25E10 Pine TriplEx shoot tip libra... 129 2e-029
gb|AW064656.1|AW064656 ST34B04 Pine TriplEx shoot tip libra... 129 2e-029
gb|AW981873.1|AW981873 PC19F11 Pine TriplEx pollen cone lib... 129 2e-029
gb|BQ291482.1|BQ291482 NXRV059_F08_F NXRV (Nsf Xylem Root w... 129 2e-029
gb|BQ699586.1|BQ699586 NXRV124_C02_F NXRV (Nsf Xylem Root w... 129 2e-029
gb|BQ702181.1|BQ702181 NXSI_125_H02_F NXSI (Nsf Xylem Side ... 129 2e-029
gb|CD028483.1|CD028483 NXSI_119_E06_F NXSI (Nsf Xylem Side ... 129 2e-029
gb|CO367450.1|CO367450 RTK1_34_H04.b1_A029 Roots minus pota... 129 2e-029
gb|CO367532.1|CO367532 RTK1_34_H04.g1_A029 Roots minus pota... 129 2e-029
gb|CV032483.1|CV032483 RTNACL1_8_B03.g1_A029 Roots plus add... 129 2e-029
gb|CX649429.1|CX649429 COLD1_35_E12.b1_A029 Root cold Pinus... 129 2e-029
gb|CX649512.1|CX649512 COLD1_35_E12.g1_A029 Root cold Pinus... 129 2e-029
gb|CX651620.1|CX651620 COLD1_53_D10.g1_A029 Root cold Pinus... 129 2e-029
gb|DR011506.1|DR011506 HEAT1_6_D05.b1_A029 Root at 37 C for... 129 2e-029
gb|DR011586.1|DR011586 HEAT1_6_D05.g1_A029 Root at 37 C for... 129 2e-029
gb|DR050573.1|DR050573 RTBOR1_24_H06.b1_A029 Roots plus add... 129 2e-029
gb|DR050658.1|DR050658 RTBOR1_24_H06.g1_A029 Roots plus add... 129 2e-029
gb|DR089861.1|DR089861 RTAL1_11_F04.b1_A029 Roots plus adde... 129 2e-029
gb|DR092369.1|DR092369 STRR1_1_A09.b1_A033 Stem Response Re... 129 2e-029
gb|DR092449.1|DR092449 STRR1_1_A09.g1_A033 Stem Response Re... 129 2e-029
gb|DR109733.1|DR109733 RTS1_4_F11.b1_A029 Roots minus sulfu... 129 2e-029
gb|DR110590.1|DR110590 RTS1_11_F06.g1_A029 Roots minus sulf... 129 2e-029
gb|DR111320.1|DR111320 RTS1_16_H04.g1_A029 Roots minus sulf... 129 2e-029
gb|DR112758.1|DR112758 RTS1_30_H09.b1_A029 Roots minus sulf... 129 2e-029
gb|DR112824.1|DR112824 RTS1_30_H09.g1_A029 Roots minus sulf... 129 2e-029
gb|DR117021.1|DR117021 RTMG1_4_F03.b1_A029 Roots minus magn... 129 2e-029
gb|DR120307.1|DR120307 RTMG1_28_G09.g2_A029 Roots minus mag... 129 2e-029
gb|DR168541.1|DR168541 RTPHOS1_26_E04.b1_A029 Roots minus p... 129 2e-029
gb|DR385301.1|DR385301 RTHG1_7_G09.g1_A029 Roots plus added... 129 2e-029
gb|DR745683.1|DR745683 RTCU1_31_D06.g1_A029 Roots plus adde... 129 2e-029
gb|AW010040.1|AW010040 ST01G02 Pine TriplEx shoot tip libra... 127 5e-029
gb|BE656756.1|BE656756 NXCI_056_E06_F NXCI (Nsf Xylem Compr... 126 2e-028
gb|BG275492.1|BG275492 NXSI_139_E06_F NXSI (Nsf Xylem Side ... 126 2e-028
gb|DR098991.1|DR098991 STRR1_50_D02.b1_A033 Stem Response R... 125 4e-028
gb|DR168614.1|DR168614 RTPHOS1_26_E04.g1_A029 Roots minus p... 122 2e-027
gb|AW587726.1|AW587726 ST66A04 Pine TriplEx shoot tip libra... 122 3e-027
gb|BQ702065.1|BQ702065 NXSI_124_A05_F NXSI (Nsf Xylem Side ... 122 3e-027
gb|AW056753.1|AW056753 ST55D12 Pine TriplEx shoot tip libra... 118 3e-026
gb|BG039926.1|BG039926 NXSI_101_G08_F NXSI (Nsf Xylem Side ... 113 1e-024
gb|BE662547.1|BE662547 ST87/ST87F05 Pine TriplEx shoot tip ... 112 3e-024
gb|AW226132.1|AW226132 ST77F12 Pine TriplEx shoot tip libra... 109 2e-023
gb|AW437849.1|AW437849 ST73A04 Pine TriplEx shoot tip libra... 109 2e-023
gb|AW981762.1|AW981762 PC18D09 Pine TriplEx pollen cone lib... 105 4e-022
gb|AW981976.1|AW981976 PC22C08 Pine TriplEx pollen cone lib... 105 4e-022
gb|BE662536.1|BE662536 ST87/ST87E03 Pine TriplEx shoot tip ... 101 5e-021
>gb|AW011366.1|AW011366 ST19H10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST19H10, mRNA sequence
Length = 396
Score = 146 bits (313), Expect = 2e-034
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L P ECSP+C SRCS T Y+K CL CNKCCAKCLCVPPG YGNK CPCYNNWKTK G
Sbjct: 34 SLQPAECSPRCTSRCSATAYQKPCLFYCNKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG 213
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 214 GPKCP* 231
>gb|AW042959.1|AW042959 ST27E10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST27E10, mRNA sequence
Length = 513
Score = 146 bits (313), Expect = 2e-034
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L P ECSP+C SRCS T Y+K CL CNKCCAKCLCVPPG YGNK CPCYNNWKTK G
Sbjct: 232 SLQPAECSPRCTSRCSATAYQKPCLFYCNKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG 411
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 412 GPKCP* 429
>gb|BX681680.1|BX681680 BX681680 RS Pinus pinaster cDNA clone RS62H03, mRNA sequence
Length = 548
Score = 146 bits (313), Expect = 2e-034
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L P ECSP+C SRCS T Y+K CL CNKCCAKCLCVPPG YGNK CPCYNNWKTK G
Sbjct: 130 SLQPAECSPRCTSRCSATAYQKPCLFYCNKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG 309
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 310 GPKCP* 327
>gb|DR099897.1|DR099897 STRR1_59_E05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_59_E05_A033 5', mRNA sequence
Length = 430
Score = 146 bits (313), Expect = 2e-034
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L P ECSP+C SRCS T Y+K CL CNKCCAKCLCVPPG YGNK CPCYNNWKTK G
Sbjct: 71 SLQPAECSPRCTSRCSATAYQKPCLFYCNKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG 250
Query: 422 GPKCP* 439
GPKCP*
Sbjct: 251 GPKCP* 268
>gb|BX249133.1|BX249133 BX249133 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP020D05 similar to GIBBERELLIN REGULATED
PROTEIN, mRNA sequence
Length = 700
Score = 133 bits (285), Expect = 1e-030
Identities = 44/65 (67%), Positives = 51/65 (78%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++GG
Sbjct: 196 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGG 375
Query: 425 PKCP* 439
PKCP*
Sbjct: 376 PKCP* 390
>gb|BX250252.1|BX250252 BX250252 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP034D01 similar to GIBBERELLIN REGULATED
PROTEIN, mRNA sequence
Length = 622
Score = 133 bits (285), Expect = 1e-030
Identities = 44/65 (67%), Positives = 51/65 (78%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG YGNK CPCYNNWKT++GG
Sbjct: 197 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGG 376
Query: 425 PKCP* 439
PKCP*
Sbjct: 377 PKCP* 391
>gb|AW225859.1|AW225859 ST72E12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST72E12, mRNA sequence
Length = 458
Score = 130 bits (278), Expect = 1e-029
Identities = 47/66 (71%), Positives = 50/66 (75%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L P ECSP+C SRCS T Y+K CL CNKCCAKCLCVPPG YGNK CPCYNN TK G
Sbjct: 227 SLQPAECSPRCTSRCSATAYQKPCLFYCNKCCAKCLCVPPGTYGNKQMCPCYNNXXTKRG 406
Query: 422 GPKCP* 439
KCP*
Sbjct: 407 XXKCP* 424
>gb|AW064560.1|AW064560 ST33A07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST33A07, mRNA sequence
Length = 584
Score = 106 bits (226), Expect(2) = 1e-029
Identities = 36/46 (78%), Positives = 37/46 (80%)
Frame = +2 / +2
Query: 302 RKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP* 439
+K CL CNKCCAKCLCVPPG YGNK CPCYNNWKT GPKCP*
Sbjct: 284 KKPCLFYCNKCCAKCLCVPPGTYGNKQMCPCYNNWKTXRXGPKCP* 421
Score = 43.2 bits (88), Expect(2) = 1e-029
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTL 322
+L P ECSP+C SRCS T Y++A L L
Sbjct: 223 SLQPAECSPRCTSRCSATAYQEAVLVL 303
>gb|AW226116.1|AW226116 ST77E06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST77E06, mRNA sequence
Length = 453
Score = 129 bits (277), Expect = 1e-029
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEG 421
+L P ECSP+C SRCS T Y+K CL CNKCCAKCLCVPPG YGNK CPCYNN TK G
Sbjct: 224 SLQPAECSPRCTSRCSATAYQKPCLFYCNKCCAKCLCVPPGTYGNKQMCPCYNNXXTKRG 403
Query: 422 GPKCP 436
KCP
Sbjct: 404 XXKCP 418
>gb|AW042801.1|AW042801 ST25E10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST25E10, mRNA sequence
Length = 595
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 220 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 399
Query: 425 PKCP* 439
PKCP*
Sbjct: 400 PKCP* 414
>gb|AW064656.1|AW064656 ST34B04 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST34B04, mRNA sequence
Length = 508
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 212 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 391
Query: 425 PKCP* 439
PKCP*
Sbjct: 392 PKCP* 406
>gb|AW981873.1|AW981873 PC19F11 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC19F11, mRNA sequence
Length = 487
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 113 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 292
Query: 425 PKCP* 439
PKCP*
Sbjct: 293 PKCP* 307
>gb|BQ291482.1|BQ291482 NXRV059_F08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV059_F08 5' similar to Arabidopsis thaliana
sequence At3g02885 GASA5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 618
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 201 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 380
Query: 425 PKCP* 439
PKCP*
Sbjct: 381 PKCP* 395
>gb|BQ699586.1|BQ699586 NXRV124_C02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV124_C02 5' similar to Arabidopsis thaliana
sequence At3g02885 GASA5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 584
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 195 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 374
Query: 425 PKCP* 439
PKCP*
Sbjct: 375 PKCP* 389
>gb|BQ702181.1|BQ702181 NXSI_125_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_125_H02 5' similar to Arabidopsis thaliana
sequence At3g02885 GASA5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 410
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 183 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 362
Query: 425 PKCP* 439
PKCP*
Sbjct: 363 PKCP* 377
>gb|CD028483.1|CD028483 NXSI_119_E06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_119_E06 5' similar to Arabidopsis thaliana
sequence At1g74670 GAST1-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 510
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 5 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 184
Query: 425 PKCP* 439
PKCP*
Sbjct: 185 PKCP* 199
>gb|CO367450.1|CO367450 RTK1_34_H04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_H04_A029 3', mRNA sequence
Length = 712
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / -3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 485 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 306
Query: 425 PKCP* 439
PKCP*
Sbjct: 305 PKCP* 291
>gb|CO367532.1|CO367532 RTK1_34_H04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_H04_A029 5', mRNA sequence
Length = 680
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / -2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 451 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 272
Query: 425 PKCP* 439
PKCP*
Sbjct: 271 PKCP* 257
>gb|CV032483.1|CV032483 RTNACL1_8_B03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_B03_A029 5', mRNA sequence
Length = 704
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / -2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 574 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 395
Query: 425 PKCP* 439
PKCP*
Sbjct: 394 PKCP* 380
>gb|CX649429.1|CX649429 COLD1_35_E12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_E12_A029 3', mRNA sequence
Length = 733
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 153 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 332
Query: 425 PKCP* 439
PKCP*
Sbjct: 333 PKCP* 347
>gb|CX649512.1|CX649512 COLD1_35_E12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_E12_A029 5', mRNA sequence
Length = 795
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 180 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 359
Query: 425 PKCP* 439
PKCP*
Sbjct: 360 PKCP* 374
>gb|CX651620.1|CX651620 COLD1_53_D10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_53_D10_A029 5', mRNA sequence
Length = 733
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 186 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 365
Query: 425 PKCP* 439
PKCP*
Sbjct: 366 PKCP* 380
>gb|DR011506.1|DR011506 HEAT1_6_D05.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_D05_A029 3', mRNA sequence
Length = 766
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 130 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 309
Query: 425 PKCP* 439
PKCP*
Sbjct: 310 PKCP* 324
>gb|DR011586.1|DR011586 HEAT1_6_D05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_D05_A029 5', mRNA sequence
Length = 786
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 187 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 366
Query: 425 PKCP* 439
PKCP*
Sbjct: 367 PKCP* 381
>gb|DR050573.1|DR050573 RTBOR1_24_H06.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_24_H06_A029 3', mRNA sequence
Length = 531
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 67 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 246
Query: 425 PKCP* 439
PKCP*
Sbjct: 247 PKCP* 261
>gb|DR050658.1|DR050658 RTBOR1_24_H06.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_24_H06_A029 5', mRNA sequence
Length = 664
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 179 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 358
Query: 425 PKCP* 439
PKCP*
Sbjct: 359 PKCP* 373
>gb|DR089861.1|DR089861 RTAL1_11_F04.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_11_F04_A029 3', mRNA sequence
Length = 787
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 284 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 463
Query: 425 PKCP* 439
PKCP*
Sbjct: 464 PKCP* 478
>gb|DR092369.1|DR092369 STRR1_1_A09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_A09_A033 3', mRNA sequence
Length = 661
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 169 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 348
Query: 425 PKCP* 439
PKCP*
Sbjct: 349 PKCP* 363
>gb|DR092449.1|DR092449 STRR1_1_A09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_A09_A033 5', mRNA sequence
Length = 662
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 137 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 316
Query: 425 PKCP* 439
PKCP*
Sbjct: 317 PKCP* 331
>gb|DR109733.1|DR109733 RTS1_4_F11.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_4_F11_A029 3', mRNA sequence
Length = 682
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 37 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 216
Query: 425 PKCP* 439
PKCP*
Sbjct: 217 PKCP* 231
>gb|DR110590.1|DR110590 RTS1_11_F06.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_11_F06_A029 5', mRNA sequence
Length = 736
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 164 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 343
Query: 425 PKCP* 439
PKCP*
Sbjct: 344 PKCP* 358
>gb|DR111320.1|DR111320 RTS1_16_H04.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_H04_A029 5', mRNA sequence
Length = 729
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 155 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 334
Query: 425 PKCP* 439
PKCP*
Sbjct: 335 PKCP* 349
>gb|DR112758.1|DR112758 RTS1_30_H09.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_30_H09_A029 3', mRNA sequence
Length = 668
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 55 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 234
Query: 425 PKCP* 439
PKCP*
Sbjct: 235 PKCP* 249
>gb|DR112824.1|DR112824 RTS1_30_H09.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_30_H09_A029 5', mRNA sequence
Length = 645
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 186 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 365
Query: 425 PKCP* 439
PKCP*
Sbjct: 366 PKCP* 380
>gb|DR117021.1|DR117021 RTMG1_4_F03.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_4_F03_A029 3', mRNA sequence
Length = 715
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 122 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 301
Query: 425 PKCP* 439
PKCP*
Sbjct: 302 PKCP* 316
>gb|DR120307.1|DR120307 RTMG1_28_G09.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_G09_A029 5', mRNA sequence
Length = 669
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 187 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 366
Query: 425 PKCP* 439
PKCP*
Sbjct: 367 PKCP* 381
>gb|DR168541.1|DR168541 RTPHOS1_26_E04.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_26_E04_A029 3', mRNA sequence
Length = 669
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / -2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 491 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 312
Query: 425 PKCP* 439
PKCP*
Sbjct: 311 PKCP* 297
>gb|DR385301.1|DR385301 RTHG1_7_G09.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_7_G09_A029 5', mRNA sequence
Length = 596
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / -2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 433 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 254
Query: 425 PKCP* 439
PKCP*
Sbjct: 253 PKCP* 239
>gb|DR745683.1|DR745683 RTCU1_31_D06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_31_D06_A029 5', mRNA sequence
Length = 459
Score = 129 bits (276), Expect = 2e-029
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 195 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 374
Query: 425 PKCP* 439
PKCP*
Sbjct: 375 PKCP* 389
>gb|AW010040.1|AW010040 ST01G02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST01G02, mRNA sequence
Length = 489
Score = 127 bits (273), Expect = 5e-029
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNW+T++GG
Sbjct: 217 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWRTQQGG 396
Query: 425 PKCP* 439
PKCP*
Sbjct: 397 PKCP* 411
>gb|BE656756.1|BE656756 NXCI_056_E06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_056_E06 5' similar to Arabidopsis
thaliana sequence At3g02885 GASA5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 460
Score = 126 bits (269), Expect = 2e-028
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++G
Sbjct: 193 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGX 372
Query: 425 PKCP* 439
PKCP*
Sbjct: 373 PKCP* 387
>gb|BG275492.1|BG275492 NXSI_139_E06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_139_E06 5' similar to Arabidopsis thaliana
sequence At3g02885 GASA5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 489
Score = 126 bits (269), Expect = 2e-028
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++G
Sbjct: 193 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGX 372
Query: 425 PKCP* 439
PKCP*
Sbjct: 373 PKCP* 387
>gb|DR098991.1|DR098991 STRR1_50_D02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_50_D02_A033 3', mRNA sequence
Length = 460
Score = 125 bits (267), Expect = 4e-028
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = +2 / -1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GG
Sbjct: 325 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGG 146
Query: 425 PKCP* 439
P CP*
Sbjct: 145 P*CP* 131
>gb|DR168614.1|DR168614 RTPHOS1_26_E04.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_26_E04_A029 5', mRNA sequence
Length = 590
Score = 122 bits (261), Expect = 2e-027
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = +2 / -2
Query: 251 PWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPK 430
P E +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GGPK
Sbjct: 589 PSEIGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGGPK 410
Query: 431 CP* 439
CP*
Sbjct: 409 CP* 401
>gb|AW587726.1|AW587726 ST66A04 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST66A04, mRNA sequence
Length = 463
Score = 122 bits (260), Expect = 3e-027
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +2 / +1
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++G
Sbjct: 211 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGX 390
Query: 425 PKCP* 439
KCP*
Sbjct: 391 XKCP* 405
>gb|BQ702065.1|BQ702065 NXSI_124_A05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_124_A05 5' similar to Arabidopsis thaliana
sequence At3g02885 GASA5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 220
Score = 122 bits (260), Expect = 3e-027
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++G
Sbjct: 6 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGX 185
Query: 425 PKCP* 439
KCP*
Sbjct: 186 XKCP* 200
>gb|AW056753.1|AW056753 ST55D12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST55D12, mRNA sequence
Length = 505
Score = 118 bits (253), Expect = 3e-026
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2 / +3
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L P EC C RCSKTQY K C+ C KCC K CVPPG YG+K CPCYN+WKTK GG
Sbjct: 210 LRPEECPSACSYRCSKTQYLKPCMFYCQKCCLKYRCVPPGTYGHKEVCPCYNDWKTKRGG 389
Query: 425 PKCP* 439
KCP*
Sbjct: 390 XKCP* 404
>gb|BG039926.1|BG039926 NXSI_101_G08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_101_G08 5' similar to Arabidopsis thaliana
sequence At1g74670 GAST1-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 460
Score = 113 bits (241), Expect = 1e-024
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +2 / +2
Query: 284 CSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGGPKCP* 439
CS T ++K C+ C KCCAKCLCVPPG GNK CPCYNNWKT++GGPKCP*
Sbjct: 2 CSATSHKKPCMFFCQKCCAKCLCVPPGTSGNKQVCPCYNNWKTQQGGPKCP* 157
>gb|BE662547.1|BE662547 ST87/ST87F05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST87/ST87F05, mRNA sequence
Length = 403
Score = 112 bits (239), Expect = 3e-024
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +2 / +2
Query: 242 NLNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNN 403
+L P ECSP+C SRCS T Y+K CL CNKCCAKCLCVPPG Y NK CPCYNN
Sbjct: 224 SLQPAECSPRCTSRCSATAYQKPCLFYCNKCCAKCLCVPPGTYXNKQMCPCYNN 385
>gb|AW226132.1|AW226132 ST77F12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST77F12, mRNA sequence
Length = 441
Score = 109 bits (233), Expect = 2e-023
Identities = 38/65 (58%), Positives = 45/65 (69%)
Frame = +2 / +2
Query: 245 LNPWECSPKCGSRCSKTQYRKACLTLCNKCCAKCLCVPPGFYGNKGACPCYNNWKTKEGG 424
L+P EC +C RCS T ++K C+ C KCCAKCLCVPPG K CPCYNN KT++G
Sbjct: 212 LHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTSXXKQVCPCYNNXKTQQGX 391
Query: 425 PKCP* 439
KCP*
Sbjct: 392 XKCP* 406
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 247,867,735
Number of Sequences: 355925
Number of extensions: 2944916
Number of successful extensions: 30658
Number of sequences better than 1.0e-020: 82
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 8896411425
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)