TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161295.2.1
(1475 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciat... 489 e-137
gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo li... 478 e-134
gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered lo... 475 e-133
gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus pota... 460 e-128
gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Re... 445 e-124
gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo li... 439 e-122
gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Plani... 422 e-117
gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response R... 406 e-112
gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pin... 398 e-110
gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pin... 395 e-109
gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus ni... 391 e-108
gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine r... 388 e-107
gb|DT631983.1|DT631983 EST1146914 Normalized pine embryo li... 386 e-106
gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Re... 379 e-104
gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciat... 378 e-104
gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciat... 376 e-103
gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus pota... 370 e-101
gb|DR684272.1|DR684272 EST1074349 Normalized pine embryo li... 369 e-101
gb|BQ697805.1|BQ697805 NXPV_061_A10_F NXPV (Nsf Xylem Plani... 361 9e-099
gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo li... 359 2e-098
gb|BQ696619.1|BQ696619 NXPV_043_C09_F NXPV (Nsf Xylem Plani... 357 1e-097
gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciat... 351 7e-096
gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pin... 351 7e-096
gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus... 348 6e-095
gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus add... 347 2e-094
gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added... 347 2e-094
gb|BI202802.1|BI202802 NXPV_090_F11_F NXPV (Nsf Xylem Plani... 346 3e-094
gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nit... 341 1e-092
gb|BQ696316.1|BQ696316 NXPV_037_H09_F NXPV (Nsf Xylem Plani... 339 4e-092
gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compr... 336 2e-091
gb|BG317512.1|BG317512 NXPV_002_F10_F NXPV (Nsf Xylem Plani... 333 2e-090
gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo li... 325 4e-088
gb|DR094453.1|DR094453 STRR1_14_E02.g1_A033 Stem Response R... 325 7e-088
gb|BQ700846.1|BQ700846 NXRV112_B12_F NXRV (Nsf Xylem Root w... 324 9e-088
gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus... 319 1e-087
gb|BQ696304.1|BQ696304 NXPV_037_G06_F NXPV (Nsf Xylem Plani... 324 1e-087
gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root ... 322 3e-087
gb|BE241113.1|BE241113 NXNV_173_A08_F Nsf Xylem Normal wood... 302 5e-081
gb|BQ696029.1|BQ696029 NXPV_035_F01_F NXPV (Nsf Xylem Plani... 301 7e-081
gb|BQ698583.1|BQ698583 NXPV_071_F08_F NXPV (Nsf Xylem Plani... 301 7e-081
gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control P... 238 2e-080
gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus ad... 292 6e-078
gb|DR069574.1|DR069574 RTDK1_8_C04.b1_A029 Roots, dark Pinu... 290 2e-077
gb|BX255109.1|BX255109 BX255109 Pinus pinaster differenciat... 287 1e-076
gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus ad... 286 2e-076
gb|CO200454.1|CO200454 GEO2_7_C04.g1_A032 Root gravitropism... 284 9e-076
gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus add... 213 3e-072
gb|CO169507.1|CO169507 NDL1_7_B11.g1_A029 Needles control P... 269 5e-071
gb|BG040600.1|BG040600 NXSI_113_A01_F NXSI (Nsf Xylem Side ... 267 2e-070
gb|DR079740.1|DR079740 RTFEPL1_17_F12.b1_A029 Roots plus ad... 263 3e-069
gb|DR069271.1|DR069271 RTDK1_6_C04.b1_A029 Roots, dark Pinu... 261 1e-068
gb|BQ697176.1|BQ697176 NXPV_050_D09_F NXPV (Nsf Xylem Plani... 260 2e-068
gb|BQ654839.1|BQ654839 NXRV086_D03_F NXRV (Nsf Xylem Root w... 254 1e-066
gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus add... 253 2e-066
gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus ad... 250 1e-065
gb|AW888189.1|AW888189 NXNV_105_F12_F Nsf Xylem Normal wood... 250 2e-065
gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus cal... 250 2e-065
gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo li... 249 4e-065
gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciat... 244 1e-063
gb|CX652868.1|CX652868 COLD1_62_B04.b1_A029 Root cold Pinus... 244 1e-063
gb|DR385918.1|DR385918 RTHG1_11_D11.g1_A029 Roots plus adde... 209 6e-063
gb|DR079802.1|DR079802 RTFEPL1_17_F12.g1_A029 Roots plus ad... 241 9e-063
gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compr... 237 1e-061
gb|BE209115.1|BE209115 NXNV_164_A09_F Nsf Xylem Normal wood... 230 2e-059
gb|DR023386.1|DR023386 STRS1_57_F01.b1_A034 Shoot tip pitch... 228 6e-059
gb|BG275186.1|BG275186 NXSI_140_H02_F NXSI (Nsf Xylem Side ... 227 2e-058
gb|BQ695559.1|BQ695559 NXPV_030_A03_F NXPV (Nsf Xylem Plani... 226 4e-058
gb|AW290603.1|AW290603 NXNV044A08F Nsf Xylem Normal wood Ve... 223 2e-057
gb|CD027267.1|CD027267 NXNV044A08 Nsf Xylem Normal wood Ver... 223 2e-057
gb|AW758946.1|AW758946 NXNV_095_F06_F Nsf Xylem Normal wood... 222 4e-057
gb|CO158722.1|CO158722 FLD1_8_G04.g1_A029 Root flooded Pinu... 220 2e-056
gb|CX650089.1|CX650089 COLD1_43_A08.g1_A029 Root cold Pinus... 218 7e-056
gb|DR092087.1|DR092087 RTAL1_26_E11.b1_A029 Roots plus adde... 218 7e-056
gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compr... 216 2e-055
gb|BG275851.1|BG275851 NXSI_148_F04_F NXSI (Nsf Xylem Side ... 215 9e-055
gb|BG319377.1|BG319377 NXPV_027_B04_F NXPV (Nsf Xylem Plani... 215 9e-055
gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus... 214 1e-054
gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pin... 214 1e-054
gb|AW758792.1|AW758792 NXNV_089_G04_F Nsf Xylem Normal wood... 210 2e-053
gb|AW784129.1|AW784129 NXNV_103_E03_F Nsf Xylem Normal wood... 207 1e-052
gb|DR072584.1|DR072584 RTDK1_27_F10.b1_A029 Roots, dark Pin... 207 2e-052
gb|BQ696902.1|BQ696902 NXPV_046_F10_F NXPV (Nsf Xylem Plani... 204 1e-051
gb|AL750350.1|AL750350 AL750350 RN Pinus pinaster cDNA clon... 202 6e-051
gb|BX676890.1|BX676890 BX676890 RN Pinus pinaster cDNA clon... 139 9e-051
gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus... 197 1e-049
gb|BE582468.1|BE582468 NXCI_033_G07_F NXCI (Nsf Xylem Compr... 195 5e-049
gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus... 195 5e-049
gb|BX253417.1|BX253417 BX253417 Pinus pinaster differenciat... 195 7e-049
gb|BE123641.1|BE123641 NXNV_150_B11_F Nsf Xylem Normal wood... 194 1e-048
gb|BG832809.1|BG832809 NXPV_081_A01_F NXPV (Nsf Xylem Plani... 194 1e-048
gb|CX646143.1|CX646143 COLD1_7_C08.g1_A029 Root cold Pinus ... 194 1e-048
gb|DR081398.1|DR081398 RTFEPL1_29_G11.b1_A029 Roots plus ad... 192 5e-048
gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus ni... 188 6e-047
gb|AI813092.1|AI813092 20F12 Pine Lambda Zap Xylem library ... 187 2e-046
gb|CF479423.1|CF479423 RTWW3_22_G10.b1_A022 Well-watered lo... 186 3e-046
gb|DR682084.1|DR682084 EST1072159 Normalized pine embryo li... 186 3e-046
gb|AW758685.1|AW758685 NXNV_085_C06_F Nsf Xylem Normal wood... 185 6e-046
gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus pota... 185 8e-046
gb|CO168770.1|CO168770 NDL1_2_A02.g1_A029 Needles control P... 163 1e-045
gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus pota... 181 1e-044
gb|CX713895.1|CX713895 RTPQ1_14_D01.g1_A032 Roots treated w... 177 2e-043
gb|BQ697144.1|BQ697144 NXPV_050_A11_F NXPV (Nsf Xylem Plani... 177 2e-043
gb|CV036174.1|CV036174 RTNACL1_57_F03.b1_A029 Roots plus ad... 174 1e-042
gb|BF610263.1|BF610263 NXSI_057_B05_F NXSI (Nsf Xylem Side ... 174 2e-042
gb|BF777810.1|BF777810 NXSI_075_H12_F NXSI (Nsf Xylem Side ... 172 4e-042
gb|BX251375.1|BX251375 BX251375 Pinus pinaster differenciat... 169 4e-041
gb|BX254898.1|BX254898 BX254898 Pinus pinaster differenciat... 169 4e-041
gb|CX652950.1|CX652950 COLD1_62_B04.g1_A029 Root cold Pinus... 168 1e-040
gb|BF518118.1|BF518118 NXSI_035_C02_F NXSI (Nsf Xylem Side ... 166 3e-040
gb|BI397899.1|BI397899 NXPV_110_G05_F NXPV (Nsf Xylem Plani... 166 5e-040
gb|BX254458.1|BX254458 BX254458 Pinus pinaster differenciat... 165 7e-040
gb|BE643911.1|BE643911 NXCI_048_H08_F NXCI (Nsf Xylem Compr... 163 2e-039
gb|BQ695460.1|BQ695460 NXPV_028_G04_F NXPV (Nsf Xylem Plani... 162 5e-039
gb|BM492831.1|BM492831 NXRV_031_E12_F NXRV (Nsf Xylem Root ... 160 2e-038
gb|CV033955.1|CV033955 RTNACL1_37_D08.g1_A029 Roots plus ad... 159 4e-038
gb|BQ701890.1|BQ701890 NXSI_121_H02_F NXSI (Nsf Xylem Side ... 157 1e-037
gb|BX254312.1|BX254312 BX254312 Pinus pinaster differenciat... 155 5e-037
gb|DR022670.1|DR022670 STRS1_52_E04.g1_A034 Shoot tip pitch... 155 7e-037
gb|CV032286.1|CV032286 RTNACL1_7_D03.b1_A029 Roots plus add... 153 3e-036
gb|CV032365.1|CV032365 RTNACL1_7_D03.g2_A029 Roots plus add... 153 3e-036
gb|CX646066.1|CX646066 COLD1_7_C08.b1_A029 Root cold Pinus ... 153 3e-036
gb|DR069646.1|DR069646 RTDK1_8_C04.g1_A029 Roots, dark Pinu... 153 3e-036
gb|BF778456.1|BF778456 NXSI_085_A03_F NXSI (Nsf Xylem Side ... 152 5e-036
gb|DR022522.1|DR022522 STRS1_51_E04.g1_A034 Shoot tip pitch... 151 9e-036
gb|BE996944.1|BE996944 NXCI_102_G11_F NXCI (Nsf Xylem Compr... 147 2e-034
gb|DR022603.1|DR022603 STRS1_52_E04.b1_A034 Shoot tip pitch... 144 1e-033
gb|CD025271.1|CD025271 NXSI_035_G08_F NXSI (Nsf Xylem Side ... 142 5e-033
gb|BE123636.1|BE123636 NXNV_150_A12_F Nsf Xylem Normal wood... 141 1e-032
gb|BE049813.1|BE049813 NXNV_144_E12_F Nsf Xylem Normal wood... 136 5e-031
gb|CO367722.1|CO367722 RTK1_36_C12.b1_A029 Roots minus pota... 136 5e-031
gb|BQ699855.1|BQ699855 NXRV122_E03_F NXRV (Nsf Xylem Root w... 133 3e-030
gb|CD025786.1|CD025786 NXSI_081_C08_F NXSI (Nsf Xylem Side ... 131 1e-029
gb|BE582441.1|BE582441 NXCI_033_D07_F NXCI (Nsf Xylem Compr... 128 7e-029
gb|CD024639.1|CD024639 NXRV067_G06_F NXRV (Nsf Xylem Root w... 126 5e-028
gb|CD024512.1|CD024512 NXRV_044_A01_F NXRV (Nsf Xylem Root ... 124 2e-027
gb|CD022511.1|CD022511 NXPV_058_E01_F NXPV (Nsf Xylem Plani... 121 2e-026
gb|BG319008.1|BG319008 NXPV_022_E04_F NXPV (Nsf Xylem Plani... 120 3e-026
gb|BE209359.1|BE209359 NXNV_166_G11_F Nsf Xylem Normal wood... 119 4e-026
gb|CO158653.1|CO158653 FLD1_8_G04.b1_A029 Root flooded Pinu... 118 8e-026
gb|DR118566.1|DR118566 RTMG1_17_G05.g1_A029 Roots minus mag... 118 1e-025
gb|CO168704.1|CO168704 NDL1_2_A02.b1_A029 Needles control P... 116 4e-025
gb|CD024484.1|CD024484 NXRV_043_D06_F NXRV (Nsf Xylem Root ... 114 2e-024
gb|DR022458.1|DR022458 STRS1_51_E04.b1_A034 Shoot tip pitch... 113 3e-024
gb|BF777618.1|BF777618 NXSI_070_F01_F NXSI (Nsf Xylem Side ... 112 7e-024
gb|DR072662.1|DR072662 RTDK1_27_F10.g1_A029 Roots, dark Pin... 110 2e-023
gb|BF010807.1|BF010807 NXCI_095_A03_F NXCI (Nsf Xylem Compr... 109 6e-023
gb|BM427736.1|BM427736 NXRV_002_E07_F NXRV (Nsf Xylem Root ... 108 9e-023
gb|BF186296.1|BF186296 NXCI_135_G02_F NXCI (Nsf Xylem Compr... 108 1e-022
gb|BE049816.1|BE049816 NXNV_144_F06_F Nsf Xylem Normal wood... 107 2e-022
gb|BQ702273.1|BQ702273 NXSI_126_H01_F NXSI (Nsf Xylem Side ... 104 2e-021
gb|BM133194.1|BM133194 NXLV_001_D11_F NXLV (Nsf Xylem Late ... 102 5e-021
gb|BQ697709.1|BQ697709 NXPV_059_H07_F NXPV (Nsf Xylem Plani... 100 2e-020
gb|AI920246.1|AI920246 1776 Pine Lambda Zap Xylem library P... 69 1e-019
gb|BQ701694.1|BQ701694 NXSI_118_E04_F NXSI (Nsf Xylem Side ... 98 1e-019
gb|BF010728.1|BF010728 NXCI_066_G06_F NXCI (Nsf Xylem Compr... 98 2e-019
gb|BX254121.1|BX254121 BX254121 Pinus pinaster differenciat... 95 1e-018
gb|CD020793.1|CD020793 NXNV_089_E09_F Nsf Xylem Normal wood... 95 1e-018
gb|CD021482.1|CD021482 NXNV_145_G07_F Nsf Xylem Normal wood... 92 1e-017
gb|DR118485.1|DR118485 RTMG1_17_G05.b1_A029 Roots minus mag... 92 1e-017
gb|AW758854.1|AW758854 NXNV_091_G02_F Nsf Xylem Normal wood... 87 4e-016
gb|BQ699876.1|BQ699876 NXRV122_G05_F NXRV (Nsf Xylem Root w... 86 5e-016
gb|BG040768.1|BG040768 NXSI_114_H01_F NXSI (Nsf Xylem Side ... 84 3e-015
gb|DR181538.1|DR181538 RTMNUT1_39_B09.g2_A029 Roots minus m... 81 2e-014
gb|DR094871.1|DR094871 STRR1_17_G07.b1_A033 Stem Response R... 80 3e-014
gb|DR094880.1|DR094880 STRR1_17_H07.b1_A033 Stem Response R... 80 3e-014
gb|DR094870.1|DR094870 STRR1_17_G06.b1_A033 Stem Response R... 80 4e-014
gb|CD020689.1|CD020689 NXNV_084_E01_F Nsf Xylem Normal wood... 79 8e-014
gb|BE996955.1|BE996955 NXCI_093_B09_F NXCI (Nsf Xylem Compr... 77 3e-013
gb|AW888016.1|AW888016 NXNV_105_H05_F Nsf Xylem Normal wood... 77 4e-013
gb|CD026231.1|CD026231 NXSI_124_E09_F NXSI (Nsf Xylem Side ... 76 5e-013
gb|BM428535.1|BM428535 NXRV_018_B04_F NXRV (Nsf Xylem Root ... 76 7e-013
gb|DT636892.1|DT636892 EST1151823 Normalized pine embryo li... 75 1e-012
gb|BE209218.1|BE209218 NXNV_147_E01_F Nsf Xylem Normal wood... 75 1e-012
gb|DR094963.1|DR094963 STRR1_17_H07.g1_A033 Stem Response R... 74 2e-012
gb|BQ654528.1|BQ654528 NXRV081_D12_F NXRV (Nsf Xylem Root w... 68 1e-010
gb|CO167466.1|CO167466 FLD1_69_D02.b1_A029 Root flooded Pin... 68 2e-010
gb|BQ291019.1|BQ291019 NXRV054_F03_F NXRV (Nsf Xylem Root w... 67 3e-010
gb|DR094952.1|DR094952 STRR1_17_G07.g1_A033 Stem Response R... 67 4e-010
gb|BG040272.1|BG040272 NXSI_110_E01_F NXSI (Nsf Xylem Side ... 66 8e-010
gb|DR094951.1|DR094951 STRR1_17_G06.g1_A033 Stem Response R... 65 1e-009
gb|BF169514.1|BF169514 NXCI_120_E10_F NXCI (Nsf Xylem Compr... 64 2e-009
gb|CD024098.1|CD024098 NXRV_031_H11_F NXRV (Nsf Xylem Root ... 63 4e-009
gb|BQ655025.1|BQ655025 NXRV089_C08_F NXRV (Nsf Xylem Root w... 62 7e-009
gb|CD017252.1|CD017252 NXCI_104_A04_F NXCI (Nsf Xylem Compr... 62 7e-009
gb|BX678888.1|BX678888 BX678888 RS Pinus pinaster cDNA clon... 52 1e-008
gb|BX250848.1|BX250848 BX250848 Pinus pinaster differenciat... 60 5e-008
gb|CD024673.1|CD024673 NXRV075_G01_F NXRV (Nsf Xylem Root w... 42 7e-008
gb|BX252076.1|BX252076 BX252076 Pinus pinaster differenciat... 56 6e-007
gb|BF609214.1|BF609214 NXSI_041_F09_F NXSI (Nsf Xylem Side ... 56 9e-007
gb|CR393930.1|CR393930 CR393930 RN Pinus pinaster cDNA clon... 55 2e-006
gb|CF396258.1|CF396258 RTDS2_21_H11.b1_A021 Drought-stresse... 54 2e-006
gb|CX650109.1|CX650109 COLD1_43_C05.g1_A029 Root cold Pinus... 54 2e-006
gb|DR016346.1|DR016346 STRS1_9_C03.g1_A034 Shoot tip pitch ... 54 2e-006
gb|DR089749.1|DR089749 RTAL1_10_C07.g1_A029 Roots plus adde... 54 2e-006
gb|DR093049.1|DR093049 STRR1_5_E08.g1_A033 Stem Response Re... 54 2e-006
gb|BM903500.1|BM903500 NXRV_044_H08_F NXRV (Nsf Xylem Root ... 54 3e-006
gb|CD024099.1|CD024099 NXRV_031_H12_F NXRV (Nsf Xylem Root ... 53 6e-006
gb|BQ700834.1|BQ700834 NXRV112_A09_F NXRV (Nsf Xylem Root w... 52 8e-006
gb|CO367960.1|CO367960 RTK1_37_F07.g1_A029 Roots minus pota... 52 8e-006
gb|DR017141.1|DR017141 STRS1_14_G04.b1_A034 Shoot tip pitch... 52 8e-006
gb|DR017219.1|DR017219 STRS1_14_G04.g1_A034 Shoot tip pitch... 52 8e-006
gb|DR070226.1|DR070226 RTDK1_12_C02.b1_A029 Roots, dark Pin... 52 8e-006
gb|DR079287.1|DR079287 RTFEPL1_10_G04.b1_A029 Roots plus ad... 52 8e-006
gb|DR096175.1|DR096175 STRR1_26_F12.b1_A033 Stem Response R... 52 8e-006
gb|DR097206.1|DR097206 STRR1_33_F04.b1_A033 Stem Response R... 52 8e-006
gb|DR160115.1|DR160115 RTFE1_3_G06.g1_A029 Roots minus iron... 52 8e-006
gb|DR692121.1|DR692121 EST1082208 Normalized pine embryo li... 52 8e-006
gb|DR693952.1|DR693952 EST1084042 Normalized pine embryo li... 52 8e-006
gb|BE123611.1|BE123611 NXNV_146_D02_F Nsf Xylem Normal wood... 51 1e-005
gb|BF777292.1|BF777292 NXSI_067_D10_F NXSI (Nsf Xylem Side ... 51 2e-005
gb|BM903119.1|BM903119 NXLV_079_G10_F NXLV (Nsf Xylem Late ... 51 2e-005
gb|CD023272.1|CD023272 NXPV_107_E12_F NXPV (Nsf Xylem Plani... 49 7e-005
gb|BF517974.1|BF517974 NXSI_032_D03_F NXSI (Nsf Xylem Side ... 47 4e-004
gb|BG039073.1|BG039073 NXSI_092_D07_F NXSI (Nsf Xylem Side ... 46 7e-004
gb|DR097291.1|DR097291 STRR1_33_F04.g3_A033 Stem Response R... 46 7e-004
gb|BQ702592.1|BQ702592 NXSI_130_C11_F NXSI (Nsf Xylem Side ... 45 0.001
gb|CO364510.1|CO364510 RTK1_16_D05.b1_A029 Roots minus pota... 45 0.002
gb|CX714089.1|CX714089 RTPQ1_17_D01.g1_A032 Roots treated w... 45 0.002
gb|CD021259.1|CD021259 NXNV_130_D09_F Nsf Xylem Normal wood... 44 0.003
gb|CF664217.1|CF664217 RTCNT1_8_E10.b1_A029 Root control Pi... 43 0.006
gb|BX254580.1|BX254580 BX254580 Pinus pinaster differenciat... 41 0.016
gb|CD020043.1|CD020043 NXNV019B09 Nsf Xylem Normal wood Ver... 41 0.016
gb|CR394325.1|CR394325 CR394325 RN Pinus pinaster cDNA clon... 41 0.022
gb|DR093163.1|DR093163 STRR1_6_B01.g1_A033 Stem Response Re... 40 0.030
gb|BG318413.1|BG318413 NXPV_013_D02_F NXPV (Nsf Xylem Plani... 40 0.042
gb|CX646840.1|CX646840 COLD1_11_G12.g1_A029 Root cold Pinus... 40 0.042
gb|CF666503.1|CF666503 RTCNT1_23_F08.g1_A029 Root control P... 38 0.15
gb|CO169140.1|CO169140 NDL1_4_H08.g1_A029 Needles control P... 38 0.15
gb|DR050681.1|DR050681 RTBOR1_25_B11.b1_A029 Roots plus add... 38 0.15
gb|DR050763.1|DR050763 RTBOR1_25_B11.g1_A029 Roots plus add... 38 0.15
gb|DR682382.1|DR682382 EST1072457 Normalized pine embryo li... 38 0.15
gb|AI919948.1|AI919948 1478 Pine Lambda Zap Xylem library P... 38 0.20
gb|BX252145.1|BX252145 BX252145 Pinus pinaster differenciat... 38 0.20
gb|BM158907.1|BM158907 NXLV_041_C04_F NXLV (Nsf Xylem Late ... 38 0.20
gb|BM367177.1|BM367177 NXLV_045_F07_F NXLV (Nsf Xylem Late ... 38 0.20
gb|BQ106824.1|BQ106824 NXLV089_G06_F NXLV (Nsf Xylem Late w... 38 0.20
gb|BQ198489.1|BQ198489 NXLV131_H03_F NXLV (Nsf Xylem Late w... 38 0.20
gb|CF392814.1|CF392814 RTDR3_19_A09.b1_A022 Loblolly pine r... 38 0.20
gb|CF665125.1|CF665125 RTCNT1_14_C11.b1_A029 Root control P... 38 0.20
gb|CF665210.1|CF665210 RTCNT1_14_C11.g1_A029 Root control P... 38 0.20
gb|BX678815.1|BX678815 BX678815 RS Pinus pinaster cDNA clon... 38 0.20
gb|CO366299.1|CO366299 RTK1_27_B11.b1_A029 Roots minus pota... 38 0.20
gb|DR052374.1|DR052374 RTCA1_4_F02.b1_A029 Roots minus calc... 38 0.20
gb|DR052455.1|DR052455 RTCA1_4_F02.g1_A029 Roots minus calc... 38 0.20
gb|DR052646.1|DR052646 RTCA1_6_A01.b1_A029 Roots minus calc... 38 0.20
gb|DR069142.1|DR069142 RTDK1_5_E03.b1_A029 Roots, dark Pinu... 38 0.20
gb|DR071273.1|DR071273 RTDK1_18_G09.g1_A029 Roots, dark Pin... 38 0.20
gb|DR078284.1|DR078284 RTFEPL1_3_C11.b1_A029 Roots plus add... 38 0.20
gb|DR093422.1|DR093422 STRR1_8_E01.b1_A033 Stem Response Re... 38 0.20
gb|DR093904.1|DR093904 STRR1_11_D08.b1_A033 Stem Response R... 38 0.20
gb|DR093979.1|DR093979 STRR1_11_D08.g1_A033 Stem Response R... 38 0.20
gb|DR095233.1|DR095233 STRR1_19_E02.g1_A033 Stem Response R... 38 0.20
gb|DR096316.1|DR096316 STRR1_27_E10.b1_A033 Stem Response R... 38 0.20
gb|DR744646.1|DR744646 RTCU1_23_H08.g1_A029 Roots plus adde... 38 0.20
gb|BX677523.1|BX677523 BX677523 RN Pinus pinaster cDNA clon... 37 0.39
gb|BQ700953.1|BQ700953 NXRV113_F06_F NXRV (Nsf Xylem Root w... 30 0.50
gb|BQ700934.1|BQ700934 NXRV113_D03_F NXRV (Nsf Xylem Root w... 30 0.50
gb|BQ654854.1|BQ654854 NXRV086_E10_F NXRV (Nsf Xylem Root w... 36 0.73
gb|CF401469.1|CF401469 RTWW1_12_D07.g1_A015 Well-watered lo... 35 1.0
gb|CF671518.1|CF671518 RTCNT1_57_D06.g1_A029 Root control P... 35 1.0
gb|CN783917.1|CN783917 EST782608 Sequencing ESTs from loblo... 35 1.0
gb|CO158975.1|CO158975 FLD1_10_B05.g1_A029 Root flooded Pin... 35 1.0
gb|CO169363.1|CO169363 NDL1_6_C02.g1_A029 Needles control P... 35 1.0
gb|CO170406.1|CO170406 NDL1_13_H07.g1_A029 Needles control ... 35 1.0
gb|CO172387.1|CO172387 NDL1_29_A02.g1_A029 Needles control ... 35 1.0
gb|CO174560.1|CO174560 NDL1_44_F06.g1_A029 Needles control ... 35 1.0
gb|CO197229.1|CO197229 GEO1_4_F06.g1_A029 Root gravitropism... 35 1.0
gb|CO199235.1|CO199235 GEO1_19_F05.g1_A029 Root gravitropis... 35 1.0
gb|CO199296.1|CO199296 GEO1_20_D12.b1_A029 Root gravitropis... 35 1.0
gb|CO361100.1|CO361100 NDL2_2_F03.g1_A029 Needles control 2... 35 1.0
gb|CV034865.1|CV034865 RTNACL1_12_D05.b1_A029 Roots plus ad... 35 1.0
gb|CX646514.1|CX646514 COLD1_9_G06.g1_A029 Root cold Pinus ... 35 1.0
gb|CX714339.1|CX714339 RTPQ1_20_E09.g1_A032 Roots treated w... 35 1.0
gb|DR014665.1|DR014665 HEAT1_50_G11.g1_A029 Root at 37 C fo... 35 1.0
gb|DR048696.1|DR048696 RTBOR1_10_D01.g1_A029 Roots plus add... 35 1.0
gb|DR056002.1|DR056002 RTCA1_27_A07.g1_A029 Roots minus cal... 35 1.0
gb|DR089065.1|DR089065 RTAL1_6_G10.b1_A029 Roots plus added... 35 1.0
gb|DR177105.1|DR177105 RTMNUT1_3_D10.b1_A029 Roots minus mi... 35 1.0
gb|DR178605.1|DR178605 RTMNUT1_12_G02.g1_A029 Roots minus m... 35 1.0
gb|DR387181.1|DR387181 RTHG1_20_B05.b1_A029 Roots plus adde... 35 1.0
gb|DT625663.1|DT625663 EST1157587 Sequencing ESTs from lobl... 35 1.0
gb|CO158757.1|CO158757 FLD1_9_C05.b1_A029 Root flooded Pinu... 35 1.4
gb|CO158834.1|CO158834 FLD1_9_C05.g1_A029 Root flooded Pinu... 35 1.4
gb|BQ654908.1|BQ654908 NXRV087_F07_F NXRV (Nsf Xylem Root w... 30 1.6
gb|BQ699325.1|BQ699325 NXRV126_B07_F NXRV (Nsf Xylem Root w... 30 1.6
gb|CX650153.1|CX650153 COLD1_43_G06.g1_A029 Root cold Pinus... 35 1.9
gb|DR052714.1|DR052714 RTCA1_6_A01.g1_A029 Roots minus calc... 35 1.9
gb|DR111718.1|DR111718 RTS1_19_F07.g1_A029 Roots minus sulf... 35 1.9
gb|CF672591.1|CF672591 RTCNT1_64_D12.g1_A029 Root control P... 29 2.1
gb|CF672582.1|CF672582 RTCNT1_64_C12.g1_A029 Root control P... 29 2.1
gb|BX255069.1|BX255069 BX255069 Pinus pinaster differenciat... 25 2.6
gb|CF400005.1|CF400005 RTWW1_2_F07.g1_A015 Well-watered lob... 28 2.9
gb|BX252756.1|BX252756 BX252756 Pinus pinaster differenciat... 28 2.9
gb|CF400762.1|CF400762 RTWW1_7_F03.g1_A015 Well-watered lob... 28 3.0
gb|CF402574.1|CF402574 RTWW1_21_D07.g1_A015 Well-watered lo... 28 3.1
gb|CF386165.1|CF386165 RTDR1_8_E06.g1_A015 Loblolly pine ro... 28 3.1
gb|DR388657.1|DR388657 RTHG1_29_D10.g1_A029 Roots plus adde... 28 3.2
gb|CO414168.1|CO414168 EST844553 Sequencing ESTs from loblo... 28 3.4
gb|CO414086.1|CO414086 EST844471 Sequencing ESTs from loblo... 28 3.4
gb|DT626131.1|DT626131 EST1158055 Sequencing ESTs from lobl... 28 3.4
gb|DR093837.1|DR093837 STRR1_10_E08.g1_A033 Stem Response R... 28 3.5
gb|CF388461.1|CF388461 RTDR2_3_B03.g1_A021 Loblolly pine ro... 34 3.6
gb|CO171011.1|CO171011 NDL1_18_A06.g1_A029 Needles control ... 34 3.6
gb|CO364910.1|CO364910 RTK1_22_B12.g1_A029 Roots minus pota... 34 3.6
gb|CV032070.1|CV032070 RTNACL1_5_D01.g2_A029 Roots plus add... 34 3.6
gb|DR161587.1|DR161587 RTFE1_12_E08.g1_A029 Roots minus iro... 34 3.6
gb|DR167250.1|DR167250 RTPHOS1_17_D11.g1_A029 Roots minus p... 34 3.6
gb|DR178741.1|DR178741 RTMNUT1_13_E05.g1_A029 Roots minus m... 34 3.6
gb|CO165419.1|CO165419 FLD1_54_A04.g1_A029 Root flooded Pin... 28 3.6
gb|DT626164.1|DT626164 EST1158088 Sequencing ESTs from lobl... 28 3.9
gb|CF672864.1|CF672864 RTCNT1_74_B03.g1_A029 Root control P... 29 4.8
gb|DR092723.1|DR092723 STRR1_3_A03.g1_A033 Stem Response Re... 27 6.5
gb|CF393056.1|CF393056 RTDR3_18_B11.g1_A022 Loblolly pine r... 33 6.7
gb|CO369791.1|CO369791 RTK1_54_D02.b1_A029 Roots minus pota... 33 6.7
gb|CV146328.1|CV146328 EST857537 Sequencing ESTs from loblo... 33 6.7
gb|CV147883.1|CV147883 EST859092 Sequencing ESTs from loblo... 33 6.7
gb|CX650735.1|CX650735 COLD1_47_F06.g1_A029 Root cold Pinus... 33 6.7
gb|DR051283.1|DR051283 RTBOR1_29_A05.b1_A029 Roots plus add... 33 6.7
gb|CO163002.1|CO163002 FLD1_38_G09.g1_A029 Root flooded Pin... 29 8.5
gb|AY083758.1| Pinus densata clone Pd-t614 5S ribosomal RNA... 32 9.3
>gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092F08 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 692
Score = 489 bits (1061), Expect = e-137
Identities = 194/220 (88%), Positives = 212/220 (96%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 12 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 191
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 192 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQT 371
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+D
Sbjct: 372 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTED 551
Query: 486 DPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
DPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+F
Sbjct: 552 DPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVF 671
Score = 333 bits (722), Expect = 2e-090
Identities = 159/220 (72%), Positives = 171/220 (77%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+TT
Sbjct: 670 KTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTT 491
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATK 727
ASS++VNSPG PRL GPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*ATK
Sbjct: 490 CASSNIVNSPGFPRLKGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*ATK 311
Query: 728 LLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*V 907
LLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ*
Sbjct: 310 LLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*A 131
Query: 908 STCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVL 1027
S GC RGSP*TSLVLV + A A+PSMF+VPTTLVL
Sbjct: 130 SV*GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVL 11
Score = 175 bits (377), Expect = 6e-043
Identities = 76/168 (45%), Positives = 112/168 (66%)
Frame = +1 / -1
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++E +M H+ H+ NQIRN LETP L I+I+ Q
Sbjct: 521 CISIYCLLHNLC*F*HCKFPRIPKIERTNMFPLHKSHKAFNQIRNELETPCLFPISIDCQ 342
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPD 876
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D
Sbjct: 341 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATAD 162
Query: 877 TDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
+DGI+IAPVS LR+ +RI+I+LTGT +++ + L SEHVQ ++I
Sbjct: 161 SDGINIAPVSFSLRMFKRISINLTGTCKQKACPNTLGKSEHVQGSHNI 18
Score = 129 bits (277), Expect = 4e-029
Identities = 71/178 (39%), Positives = 95/178 (53%)
Frame = -2 / +2
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ*GLW SS + LLGQC SHR +LL *G
Sbjct: 11 QN*CCGNLEHARTCQACWGTLFAYKYQ*GLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 190
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D + QYI ++V * W C+* CCSG +GA D LW W+ +
Sbjct: 191 NSRNSDYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETD 370
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
EFP+ F*SG* G C + Q W +++ GC G +R D V +H
Sbjct: 371 TEFPVRF*SG*RPYATYGGGTCWSFQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 544
Score = 124 bits (266), Expect = 1e-027
Identities = 65/161 (40%), Positives = 82/161 (50%)
Frame = +3 / -3
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q * H P + QPDQK GNS H H+ S+AP + P
Sbjct: 501 PSQPVLVLTL*IPQDSQD*KDQHVPPP*VA*GLQPDQKRTGNSVSVSHLHRLSKAPCAKP 322
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 321 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 142
Query: 897 PSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSESQPH 1019
PSK ED H+PHWY * + + +RACS H
Sbjct: 141 PSKLQFEDVQEDLHKPHWYL*AKSVPQHAWQVRACSRFPQH 19
Score = 86.8 bits (183), Expect = 4e-016
Identities = 51/112 (45%), Positives = 61/112 (54%)
Frame = -1 / +1
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 100 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 279
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASM 603
CAL M L V LLLR RS *+ M M ++ GVS+ FLIWL+ W+ +M
Sbjct: 280 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFLIWLKALCDLWRGNM 435
>gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP61 3' end, mRNA sequence
Length = 736
Score = 478 bits (1039), Expect = e-134
Identities = 193/220 (87%), Positives = 209/220 (95%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKRI ARFLLTSTSEVYGDPLQHPQ ETYWGNVNPIGVRSCYDEGKR
Sbjct: 53 KTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLQHPQTETYWGNVNPIGVRSCYDEGKR 232
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMCIDD RVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 233 TAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDDRVVSNFVAQALRKEPLTVYGDGKQT 412
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSFQYVSDLV+GL++LME HVGPFNLGNPGEFTMLELA+VV++TID +ARIEF++NT D
Sbjct: 413 RSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTAD 592
Query: 486 DPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
DPHKRKPDI++AK+ L WEP+I LREGLPLMV DFRKR+F
Sbjct: 593 DPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 712
Score = 321 bits (695), Expect = 9e-087
Identities = 156/225 (69%), Positives = 170/225 (75%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 711 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 532
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATK 727
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TVKGS SA*ATK
Sbjct: 531 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 352
Query: 728 LLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*V 907
LLTTR SSMH+ GPYVL IRA+ TS LAPR *S+V VSAVRLPSS*QLLTP+GLT PQ V
Sbjct: 351 LLTTRSSSMHILGPYVLNIRAMRTSTLAPR**SIVKVSAVRLPSS*QLLTPIGLTFPQYV 172
Query: 908 STCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
S CGCWRGSP TSLVLV + A I FA PSMF VP T VL G
Sbjct: 171 SVCGCWRGSPYTSLVLVSKKRAPIRFARPSMFNVPITFVLIVFTG 37
Score = 204 bits (440), Expect = 1e-051
Identities = 86/180 (47%), Positives = 123/180 (68%)
Frame = +1 / -1
Query: 511 DPCVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITIN 690
+PC + NL KL H EL+R+ ++E +M+ FHQ +Q++NQIRNIL+ L ++TIN
Sbjct: 568 NPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKATCLFTVTIN 389
Query: 691 RQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTA 870
Q QCLSNKV +NT I++AH+ +IC+E TC+ +L +G V++H Q SCT ALI+TA
Sbjct: 388 CQRFFAQCLSNKVANNTVIIDAHSGSICVEYTCNADLHIGPPVIVHRQSLSCTFALIITA 209
Query: 871 PDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRLRL 1050
+T IDI+P+ L L +LERI I LT TG++E G + C ++HVQ P+HI L R+ L
Sbjct: 208 SNTYRIDISPICLRLWMLERIPIYLTCTGKQEAGSNSFCQTQHVQCPHHICLDCLHRIEL 29
Score = 179 bits (385), Expect = 5e-044
Identities = 82/178 (46%), Positives = 106/178 (59%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
QD+C D EHA K + + +QY+*G+W SSPA GD+LG+CQS+RC +LL *GQ
Sbjct: 52 QDKCDGDIEHAGSGKTNWSPLLAYQYK*GIWGSSPASTDGDILGKCQSYRC*KLL**GQT 231
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
YS*+ D GL P Q G TY+Q+IW +VH PCC LCCSGT + D LW* N
Sbjct: 232 YS*DFDDGLSPGGQCGGPHCTYIQHIWTQNVHR**PCC*QLCCSGTAQRTFDSLW*R*TN 411
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
+CF* G* +D DG++ C Q WRVH AC GC ++R D + ++H
Sbjct: 412 T*LSVCF*FG*WTDSTDGKQPCWTFQSWQSWRVHDVRACSGCERNNRF*CKD*IQRKH 585
Score = 150 bits (322), Expect = 2e-035
Identities = 71/139 (51%), Positives = 80/139 (57%)
Frame = +3 / -3
Query: 543 QPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQ 722
QP QA *T Q * H PS S QP+QKH + F + HHK S+ +VPEQ
Sbjct: 536 QPEQALTS*TLQDCQD*KVQHGCFPSVESVHQPNQKHTESYVFVYRHHKLSKVLCAVPEQ 357
Query: 723 QSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPS 902
QS *QHGH +CT HM * YV+ P W G +P S QLY CPH NS *H D*H P+
Sbjct: 356 QSC*QHGHHRCTFWVHMC*IYVQCGPPHWPPGDSPSSKSQLYVCPHHNSF*HL*D*HFPN 177
Query: 903 KSPPAGAGEDHHRPHWYW* 959
SP AGED H PH YW*
Sbjct: 176 MSPSVDAGEDPHIPHLYW* 120
Score = 104 bits (221), Expect = 2e-021
Identities = 62/126 (49%), Positives = 70/126 (55%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M ILSS R R G MSI V AV MRA+VQL+ * W T P R HV S HM
Sbjct: 141 MGILSSIHRRRHIGEMSIL*VLEAVMMRANVQLRL*RWTITGGPMWRSALHVYSTHMDPE 320
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CA M VL TLLLRH ++ *+FMV +K +MFLIWL * *WK +M S
Sbjct: 321 CASMMTVLLATLLLRHCAKNL*QFMVTVNKHVAFSMFLIWLMD*FD*WKTTMLDLSILAI 500
Query: 578 LASSPC 561
L SS C
Sbjct: 501 LESSRC 518
>gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_22_G10_A022 5', mRNA sequence
Length = 716
Score = 475 bits (1031), Expect = e-133
Identities = 188/216 (87%), Positives = 207/216 (95%)
Frame = -3 / +2
Query: 1005 LNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTM 826
LNMLGLA R+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKRTAETLTM
Sbjct: 2 LNMLGLA*RVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRTAETLTM 181
Query: 825 DYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVS 646
DYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VS
Sbjct: 182 DYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 361
Query: 645 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKP 466
DLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKRKP
Sbjct: 362 DLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKP 541
Query: 465 DISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
DI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 542 DITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 649
Score = 324 bits (702), Expect = 9e-088
Identities = 155/215 (72%), Positives = 167/215 (77%)
Frame = +2 / -3
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 645 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 466
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 465 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 286
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ 901
TKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ
Sbjct: 285 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ 106
Query: 902 *VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFR 1006
* S GC RGSP*TSLVLV + A A+PSMF+
Sbjct: 105 *ASV*GCSRGSP*TSLVLVSKKRAPTR*ASPSMFK 1
Score = 177 bits (380), Expect = 2e-043
Identities = 75/163 (46%), Positives = 109/163 (66%)
Frame = +1 / -2
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 490 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 311
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPD 876
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D
Sbjct: 310 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATAD 131
Query: 877 TDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQ 1005
+DGI+IAPVS LR+ +RI+I+ TGT +++ + L SEHVQ
Sbjct: 130 SDGINIAPVSFSLRMFKRISINFTGTCKQKACPNTLGKSEHVQ 2
Score = 123 bits (264), Expect = 2e-027
Identities = 65/155 (41%), Positives = 85/155 (54%)
Frame = -2 / +1
Query: 958 HQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQAYS*NVDHGLPPWCQP*G*DRTYL 779
++YQ* LW SS + LLGQC SHR +LL *G S N D+GL + *G D +
Sbjct: 49 YKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*ENSRNSDYGLSQGSKC*GSDCSNF 228
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACG 599
QYI ++V * W C+* CCSG +GA D LW W+ + EFP+ F SG* G R C
Sbjct: 229 QYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPVRFRSG*RPYATYGGRTCW 408
Query: 598 AIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
+IQ W +++ GC G +R D V +H
Sbjct: 409 SIQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 513
Score = 122 bits (261), Expect = 6e-027
Identities = 64/156 (41%), Positives = 82/156 (52%)
Frame = +3 / -1
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 470 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 291
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 290 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 111
Query: 897 PSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACS 1004
PSK ED H+ HWY * + + +RACS
Sbjct: 110 PSKLQFEDVQEDLHKLHWYL*AKSVPQHARQVRACS 3
Score = 90.4 bits (191), Expect = 3e-017
Identities = 55/126 (43%), Positives = 66/126 (52%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 69 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 248
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+ W+A+M HS
Sbjct: 249 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGI 428
Query: 578 LASSPC 561
L + C
Sbjct: 429 LGNLQC 446
>gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_C12_A029 5', mRNA sequence
Length = 792
Score = 460 bits (999), Expect = e-128
Identities = 185/210 (88%), Positives = 200/210 (95%)
Frame = -3 / +2
Query: 996 LGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 817
LGLAKRI ARFLLTSTSEVYGDPLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYH
Sbjct: 2 LGLAKRIGARFLLTSTSEVYGDPLQHPQTETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 181
Query: 816 RGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 637
RGAN+EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV
Sbjct: 182 RGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 361
Query: 636 EGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDIS 457
+GL++LME HVGPFNLGNPGEFTMLELA+VV++TID +ARIEF++NT DDPHKRKPDI+
Sbjct: 362 DGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDIT 541
Query: 456 RAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
+AK+ L WEP+I LREGLPLMV DFRKR+F
Sbjct: 542 KAKDLLKWEPRISLREGLPLMVEDFRKRVF 631
Score = 308 bits (667), Expect = 6e-083
Identities = 149/210 (70%), Positives = 163/210 (77%)
Frame = +2 / -1
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 630 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 451
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATK 727
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TVKGS SA*ATK
Sbjct: 450 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 271
Query: 728 LLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*V 907
LLTTRPSSMH+ GPYVL IRA+ TS LAPR *S+V VSAVRLPSS*QLLTP+GLT PQ V
Sbjct: 270 LLTTRPSSMHILGPYVLNIRAMRTSTLAPR**SIVKVSAVRLPSS*QLLTPIGLTFPQYV 91
Query: 908 STCGCWRGSP*TSLVLVRRNLALILFANPS 997
S CGCWRGSP TSLVLV + A I FA PS
Sbjct: 90 SVCGCWRGSPYTSLVLVSKKRAPIRFARPS 1
Score = 192 bits (413), Expect = 7e-048
Identities = 79/154 (51%), Positives = 111/154 (72%)
Frame = +1 / -3
Query: 511 DPCVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITIN 690
+PC + NL KL H EL+R+ ++E +M+ FHQ +Q++NQIRNIL+ P L ++TIN
Sbjct: 487 NPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVTIN 308
Query: 691 RQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTA 870
Q QCLSNKV +NTAI++AH+ +IC+E TC+ +L +G V++H Q SCT ALI+TA
Sbjct: 307 CQRFFAQCLSNKVANNTAIIDAHSGSICVEYTCNADLHIGPPVIVHRQSLSCTFALIITA 128
Query: 871 PDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPG 972
+TD IDI+P+ L L +LERI I LT TG++E G
Sbjct: 127 SNTDRIDISPICLRLWMLERIPIYLTCTGKQEAG 26
Score = 174 bits (374), Expect = 2e-042
Identities = 74/144 (51%), Positives = 92/144 (63%)
Frame = -2 / +1
Query: 958 HQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQAYS*NVDHGLPPWCQP*G*DRTYL 779
+QY+*G+W SSPA GD+LG+CQS+RC +LL *GQ YS*+ D GL P Q G TY+
Sbjct: 40 YQYK*GIWGSSPASTDGDILGKCQSYRC*KLL**GQTYS*DFDDGLSPGGQCGGPHCTYI 219
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACG 599
Q+IW +VH WPCC LCCSGT + D LW* N E +CF* G* +D DG++ C
Sbjct: 220 QHIWTQNVHR*WPCC*QLCCSGTAQRTFDSLW*R*TNTELSVCF*FG*WTDSTDGKQPCW 399
Query: 598 AIQPG*PWRVHHA*ACQGCPGHHR 527
Q WRVH AC GC ++R
Sbjct: 400 TFQSWQSWRVHDVRACSGCERNNR 471
Score = 156 bits (335), Expect = 4e-037
Identities = 73/139 (52%), Positives = 82/139 (58%)
Frame = +3 / -2
Query: 543 QPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQ 722
QP QA *T Q * H PS S QP+QKH +S F + HHK S+ +VPEQ
Sbjct: 455 QPEQALTS*TLQDCQD*KVQHGCFPSVESVHQPNQKHTESSVFVYRHHKLSKVLCAVPEQ 276
Query: 723 QSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPS 902
QS *QHGH +CT HM * YV+ P W G +P S QLY CPH NS *HR D*H P+
Sbjct: 275 QSC*QHGHHRCTFWVHMC*IYVQCGPPHWPPGDSPSSKSQLYVCPHHNSF*HR*D*HFPN 96
Query: 903 KSPPAGAGEDHHRPHWYW* 959
SP AGED H PH YW*
Sbjct: 95 MSPSVDAGEDPHIPHLYW* 39
Score = 113 bits (242), Expect = 3e-024
Identities = 65/126 (51%), Positives = 73/126 (57%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M ILSS R R G MSI SV AV MRA+VQL+ * W T P R HV S HM
Sbjct: 60 MGILSSIHRRRHIGEMSILSVLEAVMMRANVQLRL*RWTITGGPMWRSALHVYSTHMDPE 239
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CA MAVL TLLLRH ++ *+FMV +K G +MFLIWL * *WK +M S
Sbjct: 240 CASMMAVLLATLLLRHCAKNL*QFMVTVNKHGAFSMFLIWLMD*FD*WKTTMLDLSILAI 419
Query: 578 LASSPC 561
L SS C
Sbjct: 420 LESSRC 437
>gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 3', mRNA sequence
Length = 898
Score = 445 bits (966), Expect = e-124
Identities = 174/199 (87%), Positives = 192/199 (96%)
Frame = -3 / -3
Query: 954 STSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFN 775
STSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAN+EVRIARIFN
Sbjct: 884 STSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFN 705
Query: 774 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGP 595
TYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGP
Sbjct: 704 TYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP 525
Query: 594 FNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
FNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKRKPDI++AK+ LGWEPK+ L
Sbjct: 524 FNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSL 345
Query: 414 REGLPLMVSDFRKRIFGDQ 358
R+GLPLMV DFR+R+FGD+
Sbjct: 344 RKGLPLMVEDFRRRVFGDE 288
Score = 312 bits (676), Expect = 4e-084
Identities = 148/198 (74%), Positives = 157/198 (79%)
Frame = +2 / +1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 292 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 471
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 472 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 651
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ 901
TKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ
Sbjct: 652 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ 831
Query: 902 *VSTCGCWRGSP*TSLVL 955
* S GC RGSP*TSLVL
Sbjct: 832 *ASV*GCSRGSP*TSLVL 885
Score = 168 bits (362), Expect = 7e-041
Identities = 69/146 (47%), Positives = 99/146 (67%)
Frame = +1 / +3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 447 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 626
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPD 876
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D
Sbjct: 627 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATAD 806
Query: 877 TDGIDIAPVSLHLRVLERITIDLTGT 954
+DGI+IAPVS LR+ +RI+I+ TGT
Sbjct: 807 SDGINIAPVSFSLRMFKRISINFTGT 884
Score = 124 bits (266), Expect = 1e-027
Identities = 66/154 (42%), Positives = 84/154 (54%)
Frame = -2 / -2
Query: 955 QYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQAYS*NVDHGLPPWCQP*G*DRTYLQ 776
QYQ* LW SS + LLGQC SHR +LL *G S N D+GL + *G D + Q
Sbjct: 885 QYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*ENSRNSDYGLSQGSKC*GSDCSNFQ 706
Query: 775 YIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGA 596
YI ++V * W C+* CCSG +GA D LW W+ + EFP+ F SG* G R C +
Sbjct: 705 YIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPVRFRSG*RPYATYGGRTCWS 526
Query: 595 IQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
IQ W +++ GC G +R D V +H
Sbjct: 525 IQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 424
Score = 117 bits (251), Expect = 1e-025
Identities = 59/139 (42%), Positives = 74/139 (53%)
Frame = +3 / +2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 467 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 646
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 647 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 826
Query: 897 PSKSPPAGAGEDHHRPHWY 953
PSK ED H+ HWY
Sbjct: 827 PSKLQFEDVQEDLHKLHWY 883
Score = 90.4 bits (191), Expect = 3e-017
Identities = 55/126 (43%), Positives = 66/126 (52%)
Frame = -1 / -1
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 868 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 689
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+ W+A+M HS
Sbjct: 688 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGI 509
Query: 578 LASSPC 561
L + C
Sbjct: 508 LGNLQC 491
>gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADB24 3' end, mRNA sequence
Length = 831
Score = 439 bits (953), Expect = e-122
Identities = 176/197 (89%), Positives = 190/197 (96%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 241 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 420
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 421 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQT 600
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++ ID NA+IEFR NT+D
Sbjct: 601 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKEAIDTNAKIEFRPNTED 780
Query: 486 DPHKRKPDISRAKEFLG 436
DPHKRKPDI++AK+ LG
Sbjct: 781 DPHKRKPDITKAKDLLG 831
Score = 308 bits (667), Expect = 6e-083
Identities = 147/202 (72%), Positives = 158/202 (78%)
Frame = +2 / -2
Query: 437 PRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPS 616
P S A ++SG LCGSS VF NSI AL S+ S+TT ASS++VNSPG PRLNGPTCSPS
Sbjct: 830 PSRSFALVISGFLLCGSSSVFGLNSIFALVSIASFTTCASSNIVNSPGFPRLNGPTCSPS 651
Query: 617 ISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAIL 796
IS IRPSTRSET WKL VCFPSP*TVKGS A*ATKLLTTRPSS H+RGPYVLKIRAI
Sbjct: 650 ISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIR 471
Query: 797 TSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLAL 976
TS AP *S+V VSAV LPSS*QL TPMGLTLPQ* S GC RGSP*TSLVLV + A
Sbjct: 470 TSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV*GCSRGSP*TSLVLVSKKRAP 291
Query: 977 ILFANPSMFRVPTTLVLCYHKG 1042
A+PSMF+VPTTLVL G
Sbjct: 290 TRLASPSMFKVPTTLVLIVFTG 225
Score = 179 bits (385), Expect = 5e-044
Identities = 76/168 (45%), Positives = 112/168 (66%)
Frame = +1 / -1
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 750 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 571
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPD 876
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D
Sbjct: 570 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATAD 391
Query: 877 TDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
+DGI+IAPVS LR+ +RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 390 SDGINIAPVSFSLRMFKRISINFTGTCKQKACPNTLGKSEHVQGSHNI 247
Score = 129 bits (276), Expect = 5e-029
Identities = 71/178 (39%), Positives = 95/178 (53%)
Frame = -2 / +3
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 240 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 419
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D + QYI ++V * W C+* CCSG +GA D LW W+ +
Sbjct: 420 NSRNSDYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETD 599
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
EFP+ F SG* G R C +IQ W +++ GC G +R D V +H
Sbjct: 600 TEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGGNRY*CKD*VQAKH 773
Score = 124 bits (265), Expect = 2e-027
Identities = 65/161 (40%), Positives = 83/161 (51%)
Frame = +3 / -3
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 730 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 551
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 550 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 371
Query: 897 PSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSESQPH 1019
PSK ED H+ HWY * + + +RACS H
Sbjct: 370 PSKLQFEDVQEDLHKLHWYL*AKSVPQHAWQVRACSRFPQH 248
Score = 90.4 bits (191), Expect = 3e-017
Identities = 55/126 (43%), Positives = 66/126 (52%)
Frame = -1 / +2
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 329 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 508
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+ W+A+M HS
Sbjct: 509 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGI 688
Query: 578 LASSPC 561
L + C
Sbjct: 689 LGNLQC 706
>gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_057_G05 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 609
Score = 422 bits (916), Expect = e-117
Identities = 170/190 (89%), Positives = 182/190 (95%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 203 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQT 382
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSFQ+VSDLVE M+LMEGEHVGPFNLGNP EFTMLELA+VV++TID NA+IEFR NT+D
Sbjct: 383 RSFQFVSDLVEXXMRLMEGEHVGPFNLGNPXEFTMLELAQVVKETIDTNAKIEFRPNTED 562
Query: 486 DPHKRKPDIS 457
DPHKRKPDI+
Sbjct: 563 DPHKRKPDIT 592
Score = 293 bits (635), Expect = 2e-078
Identities = 142/195 (72%), Positives = 153/195 (78%)
Frame = +2 / -1
Query: 458 LMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPS 637
++SG LCGSS VF NSI AL S+VS+TT ASS++VNS G PRLNGPTCSPSIS I S
Sbjct: 591 VISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSXGFPRLNGPTCSPSISRIXXS 412
Query: 638 TRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPR 817
TRSET WKL VCFPSP*TVKGS A*ATKLLTTRPSS H+RGPYVLKIRAI TS AP
Sbjct: 411 TRSETNWKLRVCFPSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL 232
Query: 818 W*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPS 997
*S+V VSAV LPSS*QL TPMGLTLPQ* S GC RGSP*TSLVLV + A A+PS
Sbjct: 231 **SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV*GCSRGSP*TSLVLVSKKRAPTRLASPS 52
Query: 998 MFRVPTTLVLCYHKG 1042
MF+VPTTLVL G
Sbjct: 51 MFKVPTTLVLIVFTG 7
Score = 177 bits (382), Expect = 1e-043
Identities = 76/168 (45%), Positives = 111/168 (66%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H NQI N LETP L I+I+ Q
Sbjct: 532 CISIYCLLHNLC*F*HCKFXRIPKIEWTNMFALHKSHXXFNQIGNELETPCLFPISIDCQ 353
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPD 876
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D
Sbjct: 352 RLLAQSLSNKITYNPTIIKAHSRTVCIENSGNPNLNICSPVIIHSQSFGCSLTLIIATAD 173
Query: 877 TDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
+DGI+IAPVS LR+ +RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 172 SDGINIAPVSFSLRMFKRISINFTGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 124 bits (265), Expect = 2e-027
Identities = 70/178 (39%), Positives = 93/178 (52%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D QYI ++V * W C+* CCSG +GA D LW W+ +
Sbjct: 202 NSRNSDYGLSQGSKC*GSDCPNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETD 381
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
EFP+ F SG* G R C +IQ +++ GC G +R D V +H
Sbjct: 382 TEFPVRFRSG*XXYATYGGRTCWSIQSWESXXIYNVRTSTGCEGDNRY*CKD*VQTKH 555
Score = 122 bits (260), Expect = 9e-027
Identities = 64/161 (39%), Positives = 82/161 (50%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 512 PSQPVLVLTL*IXXDSQD*MDQHVRPP*VA*XXQPDRKRTGNSVSVSHLHRLSKAPCAKP 333
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 332 EQQNYLQPDHHQGTFADRMY*KFGQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 153
Query: 897 PSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSESQPH 1019
PSK ED H+ HWY * + + +RACS H
Sbjct: 152 PSKLQFEDVQEDLHKLHWYL*AKSVPQHAWQVRACSRFPQH 30
Score = 89.0 bits (188), Expect = 7e-017
Identities = 55/126 (43%), Positives = 65/126 (51%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLPEFSIHTVRE 290
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL W+A+M HS
Sbjct: 291 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLXXLCDLWRANMLVHSILGI 470
Query: 578 LASSPC 561
L + C
Sbjct: 471 LXNLQC 488
>gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_63_E02_A033 3', mRNA sequence
Length = 830
Score = 406 bits (880), Expect = e-112
Identities = 159/181 (87%), Positives = 176/181 (97%)
Frame = -3 / +1
Query: 900 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFV 721
WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFV
Sbjct: 1 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFV 180
Query: 720 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
AQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV
Sbjct: 181 AQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVV 360
Query: 540 QDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGD 361
++TID NA+IEFR NT+DDPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD
Sbjct: 361 KETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGD 540
Query: 360 Q 358
+
Sbjct: 541 E 543
Score = 284 bits (614), Expect = 1e-075
Identities = 133/179 (74%), Positives = 142/179 (79%)
Frame = +2 / -1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 539 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 360
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 359 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 180
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLP 898
TKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLP
Sbjct: 179 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLP 3
Score = 146 bits (313), Expect = 4e-034
Identities = 59/128 (46%), Positives = 85/128 (66%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 384 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 205
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPD 876
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D
Sbjct: 204 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATAD 25
Query: 877 TDGIDIAP 900
+DGI+IAP
Sbjct: 24 SDGINIAP 1
Score = 107 bits (229), Expect = 2e-022
Identities = 56/135 (41%), Positives = 73/135 (54%)
Frame = -2 / +3
Query: 898 GQCQSHRCQELLR*GQAYS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCC 719
GQC SHR +LL *G S N D+GL + *G D + QYI ++V * W C+* CC
Sbjct: 3 GQC*SHRSPQLL**G*ENSRNSDYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCC 182
Query: 718 SGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCP 539
SG +GA D LW W+ + EFP+ F SG* G R C +IQ W +++ GC
Sbjct: 183 SGFAQGAFDSLWRWETDTEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCE 362
Query: 538 GHHRPQRTDRVPQEH 494
G +R D V +H
Sbjct: 363 GDNRY*CKD*VQTKH 407
Score = 100 bits (212), Expect = 4e-020
Identities = 51/121 (42%), Positives = 65/121 (53%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 364 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 185
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 184 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 5
Query: 897 P 899
P
Sbjct: 4 P 2
Score = 82.2 bits (173), Expect = 9e-015
Identities = 50/113 (44%), Positives = 58/113 (51%)
Frame = -1 / +2
Query: 899 GAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALACALTMAVLSVTLL 720
GAM IPS S MR Q K * WI T LR G SIH CAL M L V LL
Sbjct: 2 GAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRECALMMVGL*VILL 181
Query: 719 LRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
LR RS *+ M M ++ GVS+ F IWL+ W+A+M HS L + C
Sbjct: 182 LRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGILGNLQC 340
>gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_G02_A029 3', mRNA sequence
Length = 870
Score = 398 bits (864), Expect = e-110
Identities = 160/219 (73%), Positives = 184/219 (84%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 6 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 185
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+TV G Q
Sbjct: 186 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQI 365
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEG++ GP NLGNPGEFTMLELA+ V++ I+ + +E +NT D
Sbjct: 366 RSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPD 545
Query: 486 DPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
DP KRKPDI++A LGWEPK+ LREGLPLM DFR+R+
Sbjct: 546 DPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 662
Score = 246 bits (531), Expect = 4e-064
Identities = 130/217 (59%), Positives = 145/217 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS + G PSR+ GSHPR+ +A +MSG L GSS VF S S+ S+T A
Sbjct: 658 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 479
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SSS+VNSPG PR GP SPSIS I+PST SET KL +C P TV GS L A*A KLL
Sbjct: 478 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRICVPGAWTVIGSPLRA*AIKLL 299
Query: 734 TTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VST 913
TTRPSSM +RGP VL IRAI S W*S + VSA R PSS*QLLTP+GLTLPQ S
Sbjct: 298 TTRPSSMFIRGP*VLNIRAIRISNPCCLW*SNIRVSATRFPSS*QLLTPIGLTLPQYSSF 119
Query: 914 CGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLV 1024
GC RGSP TS V V R LA L A+P+MF VP TLV
Sbjct: 118 *GCSRGSPYTSDVDVSRILAPTLLASPNMFNVPITLV 8
Score = 65.2 bits (136), Expect(2) = 3e-016
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++++ P +++FH + T+N IRNI E L S ++ +
Sbjct: 497 LLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASDLCSWGLDSHWFTSKG 318
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 317 LSNKIADNTAIVNVHSWPIGIK 252
Score = 44.6 bits (91), Expect(3) = 8e-015
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -2 / +2
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
+DQC EH R E + + * +W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 5 KDQCYRYIEHVRTC*ESWSKDSTNINI*SIW*SSGTSSKGRILGQCQPNWCKKLL**GKA 184
Score = 42.8 bits (87), Expect(3) = 8e-015
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 257 YLWATNEH*RWPCCQQFYCSG 319
Score = 40.9 bits (83), Expect(2) = 3e-016
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1 / -2
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL+LI+TA T+ +DIAPV LR+ +RITI
Sbjct: 185 TLSLIITASYTNWVDIAPVFFLLRMFQRITI 93
Score = 39.1 bits (79), Expect(2) = 5e-007
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3 / -1
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH NS H+ *HCPS P EDHH
Sbjct: 186 HAFPHHNSFLHQLG*HCPSILPFEDVPEDHH 94
Score = 35.4 bits (71), Expect(2) = 5e-007
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 318 PEQ*NC*QHGHRQCSFVAHRY* 253
Score = 30.9 bits (61), Expect(3) = 8e-015
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E K S MFLIWL V* *WK + G
Sbjct: 355 EHKSEASAMFLIWLMV*FG*WKEIILG 435
Score = 30.4 bits (60), Expect(3) = 3e-004
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / +2
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A + RV++A C C G
Sbjct: 362 NPKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SCEG 496
Score = 26.7 bits (52), Expect(3) = 3e-004
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / +1
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASV 846
MVIL + + + TGAMS V AV MR SV
Sbjct: 94 MVILWNILKRKNTGAMSTQLV*EAVMMRESV 186
Score = 24.0 bits (46), Expect(3) = 3e-004
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 280 LTMAVLSAILLLR 318
>gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_65_A12_A029 5', mRNA sequence
Length = 794
Score = 395 bits (857), Expect = e-109
Identities = 159/217 (73%), Positives = 182/217 (83%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 144 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 323
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+TV G QT
Sbjct: 324 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQT 503
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEG++ GP NLGNPGEFTMLELA+ V + I+ + ++ +NT D
Sbjct: 504 RSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVNELIETSTTVQMVENTPD 683
Query: 486 DPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRK 376
DP KRKPDI++A LGWEPK+ LREGLPLM DFR+
Sbjct: 684 DPRKRKPDITKATTLLGWEPKVILREGLPLMAEDFRE 794
Score = 204 bits (441), Expect(2) = 3e-060
Identities = 107/166 (64%), Positives = 116/166 (69%)
Frame = +2 / -2
Query: 527 SMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSF 706
S+ S+T ASSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS
Sbjct: 643 SISSFTASASSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSP 464
Query: 707 LSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMG 886
L A*A KLLTTRPSSM +RGP VL IRAI S W*S + VSA R PSS*QLLTP+G
Sbjct: 463 LRA*AIKLLTTRPSSMFIRGP*VLNIRAIRISNPCCLW*SNIRVSATRFPSS*QLLTPIG 284
Query: 887 LTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLV 1024
LTLPQ S GC RGSP TS V V R LA L A+P+MF VP TLV
Sbjct: 283 LTLPQYSSF*GCSRGSPYTSDVDVSRILAPTLLASPNMFNVPITLV 146
Score = 67.0 bits (140), Expect(2) = 1e-016
Identities = 30/82 (36%), Positives = 51/82 (62%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
++ + K +H +L+ ++++ P +++FH + T+N IRNI E GL S ++ +
Sbjct: 635 LVHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSHWFTSKG 456
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 455 LSNKIADNTAIVNVHSWPIGIK 390
Score = 48.7 bits (100), Expect(2) = 3e-060
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +2 / -2
Query: 380 RKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
RKS + G PSR+ GSHPR+ +A +MSG L GSS VF
Sbjct: 790 RKSSAISGSPSRKITLGSHPRSVVAFVMSGFLLRGSSGVF 671
Score = 45.1 bits (92), Expect(3) = 5e-016
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -2 / +2
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
+DQC EH R E + + * +W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 143 KDQCYRYIEHVRTC*ESWSKDSTNINI*SIW*SSGTSSKGRILGQCQPNWCKKLL**GEA 322
Score = 42.8 bits (87), Expect(3) = 5e-016
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 395 YLWATNEH*RWPCCQQFYCSG 457
Score = 40.0 bits (81), Expect(2) = 1e-016
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL LI+TA T+ +DIAPV LR+ +RITI
Sbjct: 323 TLPLIITASYTNWVDIAPVFFLLRMFQRITI 231
Score = 39.6 bits (80), Expect(2) = 4e-007
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3 / -3
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH NS H+ *HCPS P EDHH
Sbjct: 324 HASPHHNSFLHQLG*HCPSILPFEDVPEDHH 232
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -3
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 456 PEQ*NC*QHGHRQCSFVAHRY* 391
Score = 34.5 bits (69), Expect(3) = 5e-016
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 493 EHKPEASAMFLIWLMV*FG*WKEIILG 573
Score = 28.1 bits (55), Expect(3) = 0.001
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2 / +2
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGC 542
N + +CF* G* + A+GRR A + RV++A C C
Sbjct: 500 NPKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SC 628
Score = 27.2 bits (53), Expect(3) = 0.001
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / +1
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASV 846
MVIL + + + TGAMS V AV MR SV
Sbjct: 232 MVILWNILKRKNTGAMSTQLV*EAVMMRGSV 324
Score = 24.0 bits (46), Expect(3) = 0.001
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 418 LTMAVLSAILLLR 456
>gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 5', mRNA sequence
Length = 683
Score = 391 bits (849), Expect = e-108
Identities = 159/215 (73%), Positives = 180/215 (83%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 19 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 198
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 199 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 378
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT D
Sbjct: 379 RSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPD 558
Query: 486 DPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDF 382
DP RKPDI++AK LGWEP + LREGLP M DF
Sbjct: 559 DPRMRKPDITKAKTLLGWEP*VSLREGLPRMAEDF 663
Score = 251 bits (542), Expect = 1e-065
Identities = 133/220 (60%), Positives = 147/220 (66%)
Frame = +2 / -1
Query: 383 KSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSS 562
KS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T ASS+
Sbjct: 662 KSSAIRGRPSRRET*GSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSN 483
Query: 563 MVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTR 742
+VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLLTTR
Sbjct: 482 IVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTR 303
Query: 743 PSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGC 922
PSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC
Sbjct: 302 PSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGC 123
Query: 923 WRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 122 SRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 3
Score = 119 bits (255), Expect = 4e-026
Identities = 52/170 (30%), Positives = 98/170 (57%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 510 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 331
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 330 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNI 151
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 150 TPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 1
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 267 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 434
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 266 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 445
Query: 599 G 597
G
Sbjct: 446 G 448
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 313 *QHVHHQCSCEDHKY*KF 260
>gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_13_D11_A021 5', mRNA
sequence
Length = 679
Score = 388 bits (842), Expect = e-107
Identities = 157/211 (74%), Positives = 179/211 (84%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
K+NV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 43 KSNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 222
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 223 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 402
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT D
Sbjct: 403 RSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPD 582
Query: 486 DPHKRKPDISRAKEFLGWEPKIPLREGLPLM 394
DP RKPDI++AK LGWEPK+ LREGLP M
Sbjct: 583 DPRMRKPDITKAKTLLGWEPKVSLREGLPRM 675
Score = 246 bits (531), Expect = 4e-064
Identities = 129/209 (61%), Positives = 143/209 (68%)
Frame = +2 / -3
Query: 395 MRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNS 574
+RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T ASS++VNS
Sbjct: 674 IRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNS 495
Query: 575 PGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSM 754
PG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLLTTRPSSM
Sbjct: 494 PGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSM 315
Query: 755 HMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGS 934
MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGS
Sbjct: 314 FMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGS 135
Query: 935 P*TSLVLVRRNLALILFANPSMFRVPTTL 1021
P*TS V V + LA A+P++F VP TL
Sbjct: 134 P*TSDVEVNKILAPTRLASPNIFNVPITL 48
Score = 118 bits (253), Expect = 8e-026
Identities = 52/170 (30%), Positives = 98/170 (57%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 534 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 355
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 354 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNI 175
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 174 TPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVRLYCLHRI 25
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 291 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 458
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 290 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 469
Query: 599 G 597
G
Sbjct: 470 G 472
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 337 *QHVHHQCSCEDHKY*KF 284
>gb|DT631983.1|DT631983 EST1146914 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFF10 3' end, mRNA sequence
Length = 817
Score = 386 bits (837), Expect = e-106
Identities = 156/169 (92%), Positives = 165/169 (97%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 309 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 488
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 489 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQT 668
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPN 520
RSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID N
Sbjct: 669 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTN 815
Score = 282 bits (610), Expect = 5e-075
Identities = 133/175 (76%), Positives = 142/175 (81%)
Frame = +2 / -1
Query: 518 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVK 697
AL S+VS+TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVK
Sbjct: 817 ALVSIVSFTTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVK 638
Query: 698 GSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLT 877
GS A*ATKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL T
Sbjct: 637 GSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRT 458
Query: 878 PMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
PMGLTLPQ* S GC RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 457 PMGLTLPQ*ASV*GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 293
Score = 175 bits (377), Expect = 6e-043
Identities = 77/172 (44%), Positives = 112/172 (65%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q LL Q
Sbjct: 800 LLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQS 621
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+I
Sbjct: 620 LSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINI 441
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRLRL 1050
APVS LR+ +RI+I+ TGT +++ + L SEHVQ ++I R+ L
Sbjct: 440 APVSFSLRMFKRISINFTGTCKQKACPNTLGKSEHVQGSHNISFDSLHRIVL 285
Score = 128 bits (275), Expect = 7e-029
Identities = 68/167 (40%), Positives = 91/167 (54%)
Frame = -2 / +2
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 308 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 487
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D + QYI ++V * W C+* CCSG +GA D LW W+ +
Sbjct: 488 NSRNSDYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETD 667
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHR 527
EFP+ F SG* G R C +IQ W +++ GC G +R
Sbjct: 668 TEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGDNR 808
Score = 124 bits (265), Expect = 2e-027
Identities = 65/161 (40%), Positives = 83/161 (51%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 798 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 619
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 618 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 439
Query: 897 PSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSESQPH 1019
PSK ED H+ HWY * + + +RACS H
Sbjct: 438 PSKLQFEDVQEDLHKLHWYL*AKSVPQHAWQVRACSRFPQH 316
Score = 90.4 bits (191), Expect = 3e-017
Identities = 55/126 (43%), Positives = 66/126 (52%)
Frame = -1 / +1
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 397 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 576
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+ W+A+M HS
Sbjct: 577 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGI 756
Query: 578 LASSPC 561
L + C
Sbjct: 757 LGNLQC 774
>gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 5', mRNA sequence
Length = 885
Score = 379 bits (821), Expect = e-104
Identities = 149/171 (87%), Positives = 166/171 (97%)
Frame = -3 / -3
Query: 870 SCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT 691
SCYDEGKRTAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLT
Sbjct: 883 SCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLT 704
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARI 511
VYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+I
Sbjct: 703 VYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKI 524
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
EFR NT+DDPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 523 EFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 371
Score = 265 bits (573), Expect = 6e-070
Identities = 125/170 (73%), Positives = 134/170 (78%)
Frame = +2 / +3
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 375 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 554
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 555 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 734
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QL 871
TKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL
Sbjct: 735 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QL 884
Score = 128 bits (275), Expect = 7e-029
Identities = 52/116 (44%), Positives = 76/116 (65%)
Frame = +1 / +2
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 530 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 709
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIV 864
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+
Sbjct: 710 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLII 877
Score = 93.6 bits (198), Expect = 3e-018
Identities = 50/126 (39%), Positives = 67/126 (53%)
Frame = -2 / -2
Query: 871 ELLR*GQAYS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALD 692
+LL *G S N D+GL + *G D + QYI ++V * W C+* CCSG +GA D
Sbjct: 884 QLL**G*ENSRNSDYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFD 705
Query: 691 GLW*WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTD 512
LW W+ + EFP+ F SG* G R C +IQ W +++ GC G +R D
Sbjct: 704 SLWRWETDTEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGDNRY*CKD 525
Query: 511 RVPQEH 494
V +H
Sbjct: 524 *VQTKH 507
Score = 82.2 bits (173), Expect = 9e-015
Identities = 44/111 (39%), Positives = 58/111 (52%)
Frame = +3 / +1
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 550 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 729
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNS 869
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++
Sbjct: 730 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSN 882
Score = 68.9 bits (144), Expect = 9e-011
Identities = 43/100 (43%), Positives = 51/100 (51%)
Frame = -1 / -1
Query: 860 MRASVQLKR*PWITTVVPTLRLGSHVSSIHMALACALTMAVLSVTLLLRH*GRSP*RFMV 681
MR Q K * WI T LR G SIH CAL M L V LLLR RS *+ M
Sbjct: 873 MRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRECALMMVGL*VILLLRLCARSL*QSME 694
Query: 680 MESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
M ++ GVS+ F IWL+ W+A+M HS L + C
Sbjct: 693 MGNRHGVSSSFPIWLKALCDLWRANMLVHSILGILGNLQC 574
>gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092D07 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 691
Score = 378 bits (820), Expect = e-104
Identities = 153/209 (73%), Positives = 175/209 (83%)
Frame = -3 / +1
Query: 996 LGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 817
LGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYH
Sbjct: 1 LGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYH 180
Query: 816 RGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 637
R LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V
Sbjct: 181 RQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMV 360
Query: 636 EGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDIS 457
+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A+++ +NT DDP RKPDI+
Sbjct: 361 DGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTENTPDDPRMRKPDIT 540
Query: 456 RAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+AK LGWEPK+ LREGLP M DFR R+
Sbjct: 541 KAKTLLGWEPKVSLREGLPRMAEDFRLRL 627
Score = 194 bits (419), Expect(2) = 2e-059
Identities = 103/159 (64%), Positives = 112/159 (70%)
Frame = +2 / -3
Query: 518 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVK 697
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV
Sbjct: 479 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 300
Query: 698 GSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLT 877
S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLT
Sbjct: 299 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLT 120
Query: 878 PMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANP 994
P+GLTLPQ S CGC RGSP*TS V V + LA A+P
Sbjct: 119 PIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASP 3
Score = 105 bits (223), Expect = 1e-021
Identities = 46/143 (32%), Positives = 86/143 (60%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + V ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 462 LLHSFSEFQHCEFSWVPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 283
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ A ++ ++I
Sbjct: 282 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIAASYSNWVNI 103
Query: 895 APVSLHLRVLERITIDLTGTGEE 963
P+ L L +L+R+TID G++
Sbjct: 102 TPIFLLLWMLKRVTIDFRC*GQQ 34
Score = 56.1 bits (116), Expect(2) = 2e-059
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSRR GSHPR A +MSG + GSS VF
Sbjct: 623 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 498
Score = 55.6 bits (115), Expect(2) = 6e-008
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACG 599
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 219 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGRGEYW 398
Query: 598 AIQPG*PWRVHHA*ACQGCPGHHR 527
A P R+H+ C G HR
Sbjct: 399 AY*SWEPRRIHNVGTR*SCEGAHR 470
Score = 35.9 bits (72), Expect = 0.73
Identities = 25/73 (34%), Positives = 32/73 (43%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 218 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 397
Query: 599 GHSTWVTLASSPC 561
G T +S C
Sbjct: 398 GLLILGTQENSQC 436
Score = 33.6 bits (67), Expect(2) = 0.079
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 265 *QHVHHQCSCEDHKY*KF 212
Score = 23.1 bits (44), Expect(2) = 0.079
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3 / -1
Query: 837 FQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHR 941
F +A H +S + *H P+ P A E HHR
Sbjct: 160 FLPHAFLHHSSFLLQLG*HYPNIPPFVDAQEGHHR 56
Score = 22.1 bits (42), Expect(2) = 6e-008
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +3
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 561 MGTQGLST*RPTPYG*RFPPA 623
>gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP004G08 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 495
Score = 376 bits (815), Expect = e-103
Identities = 148/164 (90%), Positives = 160/164 (97%)
Frame = -3 / +2
Query: 945 EVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYG 766
EVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAN+EVRIARIFNTYG
Sbjct: 2 EVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYG 181
Query: 765 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNL 586
PRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNL
Sbjct: 182 PRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNL 361
Query: 585 GNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISR 454
GNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKRKPDI++
Sbjct: 362 GNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITK 493
Score = 267 bits (578), Expect = 1e-070
Identities = 127/165 (76%), Positives = 135/165 (81%)
Frame = +2 / -1
Query: 452 ARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIR 631
A ++SG LCGSS VF NSI AL S+VS+TT ASS++VNSPG PRL GPTCSPSIS IR
Sbjct: 495 ALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLKGPTCSPSISRIR 316
Query: 632 PSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLA 811
PSTRSET WKL VCFPSP*TVKGS A*ATKLLTTRPSS H+RGPYVLKIRAI TS A
Sbjct: 315 PSTRSETNWKLRVCFPSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRTSTFA 136
Query: 812 PRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TS 946
P *S+V VSAV LPSS*QL TPMGLTLPQ* S GC RGSP*TS
Sbjct: 135 PL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV*GCSRGSP*TS 1
Score = 160 bits (343), Expect = 3e-038
Identities = 67/143 (46%), Positives = 97/143 (67%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++E +M A H+ H+ NQIRN LETP L I+I+ Q
Sbjct: 430 CISIYCLLHNLC*F*HCKFPRIPKIERTNMFALHKSHKAFNQIRNELETPCLFPISIDCQ 251
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPD 876
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D
Sbjct: 250 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATAD 71
Query: 877 TDGIDIAPVSLHLRVLERITIDL 945
+DGI+IAPVS LR+ +RI+I+L
Sbjct: 70 SDGINIAPVSFSLRMFKRISINL 2
Score = 120 bits (256), Expect = 3e-026
Identities = 64/151 (42%), Positives = 82/151 (54%)
Frame = -2 / +1
Query: 946 *GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQAYS*NVDHGLPPWCQP*G*DRTYLQYIW 767
*GLW SS + LLGQC SHR +LL *G S N D+GL + *G D + QYI
Sbjct: 1 *GLWRSS*TSSN*SLLGQC*SHRSPQLL**G*ENSRNSDYGLSQGSKC*GSDCSNFQYIR 180
Query: 766 PSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGAIQP 587
++V * W C+* CCSG +GA D LW W+ + EFP+ F*SG* G R C + Q
Sbjct: 181 SANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPVRF*SG*RPYATYGGRTCWSFQS 360
Query: 586 G*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
W +++ GC G +R D V +H
Sbjct: 361 WESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 453
Score = 109 bits (233), Expect = 5e-023
Identities = 57/136 (41%), Positives = 71/136 (52%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q * H R P + QPDQK GNS H H+ S+AP + P
Sbjct: 410 PSQPVLVLTL*IPQDSQD*KDQHVRPP*VA*GLQPDQKRTGNSVSVSHLHRLSKAPCAKP 231
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HC 896
EQQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HC
Sbjct: 230 EQQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HC 51
Query: 897 PSKSPPAGAGEDHHRP 944
PSK ED H+P
Sbjct: 50 PSKLQFEDVQEDLHKP 3
Score = 88.6 bits (187), Expect = 1e-016
Identities = 52/112 (46%), Positives = 62/112 (55%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 9 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 188
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASM 603
CAL M L V LLLR RS *+ M M ++ GVS+ FLIWL+ W+A+M
Sbjct: 189 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFLIWLKALCDLWRANM 344
>gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_F07_A029 5', mRNA sequence
Length = 734
Score = 370 bits (803), Expect = e-101
Identities = 149/209 (71%), Positives = 172/209 (82%)
Frame = -3 / +1
Query: 996 LGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 817
+G +R+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYH
Sbjct: 7 VGTCQRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYH 186
Query: 816 RGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 637
R LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V
Sbjct: 187 RQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMV 366
Query: 636 EGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDIS 457
+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI+
Sbjct: 367 DGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDIT 546
Query: 456 RAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+AK LGWEPK+ LREGLP M DFR R+
Sbjct: 547 KAKTLLGWEPKVSLREGLPRMAEDFRLRL 633
Score = 238 bits (515), Expect = 6e-062
Identities = 126/200 (63%), Positives = 137/200 (68%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 629 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 450
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLL
Sbjct: 449 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLL 270
Query: 734 TTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VST 913
TTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S
Sbjct: 269 TTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSF 90
Query: 914 CGCWRGSP*TSLVLVRRNLA 973
CGC RGSP*TS V V + LA
Sbjct: 89 CGCSRGSP*TSDVEVNKILA 30
Score = 102 bits (218), Expect = 5e-021
Identities = 44/143 (30%), Positives = 85/143 (59%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 468 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 289
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 288 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNI 109
Query: 895 APVSLHLRVLERITIDLTGTGEE 963
P+ L L +L+R+TID G++
Sbjct: 108 TPIFLLLWMLKRVTIDFRC*GQQ 40
Score = 46.4 bits (95), Expect(2) = 3e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 225 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 392
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 224 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 403
Query: 599 G 597
G
Sbjct: 404 G 406
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 271 *QHVHHQCSCEDHKY*KF 218
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +3
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 567 MGTQGLST*RPTPYG*RFPPA 629
>gb|DR684272.1|DR684272 EST1074349 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAQ80 3' end, mRNA sequence
Length = 776
Score = 369 bits (801), Expect = e-101
Identities = 149/158 (94%), Positives = 155/158 (98%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 301 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 480
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 481 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQT 660
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLEL 553
RSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLEL
Sbjct: 661 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLEL 774
Score = 269 bits (582), Expect = 3e-071
Identities = 126/164 (76%), Positives = 133/164 (81%)
Frame = +2 / -1
Query: 551 ASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKL 730
ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*ATKL
Sbjct: 776 ASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*ATKL 597
Query: 731 LTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VS 910
LTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ* S
Sbjct: 596 LTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*AS 417
Query: 911 TCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
GC RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 416 V*GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 285
Score = 171 bits (369), Expect = 8e-042
Identities = 73/163 (44%), Positives = 108/163 (66%)
Frame = +1 / -3
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q LL Q LSNK+T N
Sbjct: 765 HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSLSNKITYNP 586
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRV 921
I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ ++DGI+IAPVS LR+
Sbjct: 585 TIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATANSDGINIAPVSFSLRM 406
Query: 922 LERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRLRL 1050
+RI+I+ TGT +++ + L SEHVQ ++I R+ L
Sbjct: 405 FKRISINFTGTCKQKACPNTLGKSEHVQGSHNISFDSLHRIVL 277
Score = 120 bits (257), Expect = 2e-026
Identities = 64/155 (41%), Positives = 86/155 (55%)
Frame = -2 / +3
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 300 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSSQLL**G*E 479
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D + QYI ++V * W C+* CCSG +GA D LW W+ +
Sbjct: 480 NSRNSDYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETD 659
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHH 563
EFP+ F SG* G R C +IQ W +++
Sbjct: 660 TEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYN 764
Score = 120 bits (257), Expect = 2e-026
Identities = 60/143 (41%), Positives = 78/143 (54%)
Frame = +3 / -2
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R P + QPD+K GNS H H+ S+AP + PEQQ+Y Q H Q T
Sbjct: 736 *MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKPEQQNYLQPDHHQGTFADR 557
Query: 771 MY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHW 950
MY*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HW
Sbjct: 556 MY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCELRWD*HCPSKLQFEDVQEDLHKLHW 377
Query: 951 YW*GGTWR*SSLLIRACSESQPH 1019
Y * + + +RACS H
Sbjct: 376 YL*AKSVPQHAWQVRACSRFPQH 308
Score = 87.7 bits (185), Expect = 2e-016
Identities = 54/126 (42%), Positives = 65/126 (51%)
Frame = -1 / +2
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS MR Q K * WI T LR G SIH
Sbjct: 389 MEILLNILKLKLTGAMLIPSEFAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 568
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+ W+A+M HS
Sbjct: 569 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGI 748
Query: 578 LASSPC 561
L + C
Sbjct: 749 LGNLQC 766
>gb|BQ697805.1|BQ697805 NXPV_061_A10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_061_A10 5' similar to Arabidopsis
thaliana sequence At3g62830 dTDP-glucose 4-6-dehydratase
homolog D18 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 509
Score = 361 bits (782), Expect = 9e-099
Identities = 147/162 (90%), Positives = 153/162 (94%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 203 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQT 382
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
RSFQ+VSDLV M+LMEGEHVGPFNLGNP EFTMLELA V
Sbjct: 383 RSFQFVSDLVXXXMRLMEGEHVGPFNLGNPXEFTMLELAXXV 508
Score = 256 bits (554), Expect = 2e-067
Identities = 122/164 (74%), Positives = 129/164 (78%)
Frame = +2 / -3
Query: 551 ASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKL 730
ASS++VNS G PRLNGPTCSPSIS I TRSET WKL VCFPSP*TVKGS A*ATKL
Sbjct: 498 ASSNIVNSXGFPRLNGPTCSPSISRIXXXTRSETNWKLRVCFPSP*TVKGSLRKA*ATKL 319
Query: 731 LTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VS 910
LTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ* S
Sbjct: 318 LTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*AS 139
Query: 911 TCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
GC RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 138 V*GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 7
Score = 171 bits (369), Expect = 8e-042
Identities = 72/153 (47%), Positives = 104/153 (67%)
Frame = +1 / -2
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H + R+ ++EW +M A H+ H NQI N LETP L I+I+ Q LL Q LSNK+T N
Sbjct: 487 HCKFXRIPKIEWTNMFALHKSHXXXNQIGNELETPCLFPISIDCQRLLAQSLSNKITYNP 308
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRV 921
I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IAPVS LR+
Sbjct: 307 TIIKAHSRTVCIENSGNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRM 128
Query: 922 LERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
+RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 127 FKRISINFTGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 120 bits (257), Expect = 2e-026
Identities = 60/143 (41%), Positives = 78/143 (54%)
Frame = +3 / -1
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R P + QPD+K GNS H H+ S+AP + PEQQ+Y Q H Q T
Sbjct: 458 *MDQHVRPP*VA*XXQPDRKRTGNSVSVSHLHRLSKAPCAKPEQQNYLQPDHHQGTFADR 279
Query: 771 MY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHW 950
MY*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HW
Sbjct: 278 MY*KFGQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHW 99
Query: 951 YW*GGTWR*SSLLIRACSESQPH 1019
Y * + + +RACS H
Sbjct: 98 YL*AKSVPQHAWQVRACSRFPQH 30
Score = 114 bits (244), Expect = 1e-024
Identities = 62/146 (42%), Positives = 80/146 (54%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D QYI ++V * W C+* CCSG +GA D LW W+ +
Sbjct: 202 NSRNSDYGLSQGSKC*GSDCPNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETD 381
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQ 590
EFP+ F SG G R C +IQ
Sbjct: 382 TEFPVRFRSGXXXYATYGGRTCWSIQ 459
Score = 89.0 bits (188), Expect = 7e-017
Identities = 55/126 (43%), Positives = 65/126 (51%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLPEFSIHTVRE 290
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL W+A+M HS
Sbjct: 291 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLXXLCDLWRANMLVHSILGI 470
Query: 578 LASSPC 561
L + C
Sbjct: 471 LXNLQC 488
>gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG636 3' end, mRNA sequence
Length = 624
Score = 359 bits (779), Expect = 2e-098
Identities = 147/199 (73%), Positives = 167/199 (83%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+H Q E YWGNVNPIGVRSCYDEGKR
Sbjct: 26 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHLQKEEYWGNVNPIGVRSCYDEGKR 205
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
A TL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 206 VA*TLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 385
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT D
Sbjct: 386 RSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPD 565
Query: 486 DPHKRKPDISRAKEFLGWE 430
DP RKPDI++AK LGWE
Sbjct: 566 DPRMRKPDITKAKTLLGWE 622
Score = 226 bits (488), Expect = 3e-058
Identities = 122/205 (59%), Positives = 135/205 (65%)
Frame = +2 / -1
Query: 428 GSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 607
GSHPR A +MSG + GSS VF A GSM S+T ASS++VNSPG PRL GP
Sbjct: 624 GSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVF 445
Query: 608 SPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIR 787
SPSIS IRPST SET KL V P TV S LSA A KLLTTRPSSM MRGP VLKIR
Sbjct: 444 SPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIR 265
Query: 788 AILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRN 967
A+ S+ *S +NV A R PSS*QLLTP+GLTLPQ S C C RGSP*TS V V +
Sbjct: 264 AMRISKPCCL**SNINVYATRFPSS*QLLTPIGLTLPQYSSFCRCSRGSP*TSDVEVNKI 85
Query: 968 LALILFANPSMFRVPTTLVLCYHKG 1042
LA A+P++F VP TLV G
Sbjct: 84 LAPTRLASPNIFNVPITLVFIVFTG 10
Score = 116 bits (248), Expect = 4e-025
Identities = 51/170 (30%), Positives = 97/170 (57%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 517 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 338
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ TL+ I+ ++ ++I
Sbjct: 337 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CLCHTLSFIIATSYSNRVNI 158
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 157 TPIFLLL*MLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 8
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 274 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 441
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +3
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 273 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 452
Query: 599 G 597
G
Sbjct: 453 G 455
Score = 33.6 bits (67), Expect(2) = 1.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 320 *QHVHHQCSCEDHKY*KF 267
Score = 21.7 bits (41), Expect(2) = 1.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3 / -2
Query: 837 FQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHR 941
F +A H ++ + *H P+ P A E HHR
Sbjct: 215 FMPHAFLHHSNFLLQ*G*HYPNIPPFVDAQEGHHR 111
>gb|BQ696619.1|BQ696619 NXPV_043_C09_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_043_C09 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 508
Score = 357 bits (774), Expect = 1e-097
Identities = 145/162 (89%), Positives = 151/162 (93%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQ LRKEPLTVYGDGKQT
Sbjct: 203 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQXLRKEPLTVYGDGKQT 382
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
RSFQ+VSDLVE M+LMEGEHVGPFNLGNP EFT LEL V
Sbjct: 383 RSFQFVSDLVEXXMRLMEGEHVGPFNLGNPXEFTXLELXXXV 508
Score = 255 bits (552), Expect = 5e-067
Identities = 122/167 (73%), Positives = 128/167 (76%)
Frame = +2 / -2
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
T SS+ VNS G PRLNGPTCSPSIS I STRSET WKL VCFPSP*TVKGS *A
Sbjct: 507 TXXXSSNXVNSXGFPRLNGPTCSPSISRIXXSTRSETNWKLRVCFPSP*TVKGSLRKX*A 328
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ 901
TKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ
Sbjct: 327 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ 148
Query: 902 *VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
* S GC RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 147 *ASV*GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 7
Score = 169 bits (364), Expect = 4e-041
Identities = 71/151 (47%), Positives = 103/151 (68%)
Frame = +1 / -1
Query: 568 ELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAI 747
+ R+ ++EW +M A H+ H NQI N LETP L I+I+ Q LL Q LSNK+T N I
Sbjct: 481 KFXRIPKIEWTNMFALHKSHXXFNQIGNELETPCLFPISIDCQRLLAQXLSNKITYNPTI 302
Query: 748 VNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLE 927
+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IAPVS LR+ +
Sbjct: 301 IKAHSRTVCIENSGNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRMFK 122
Query: 928 RITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 121 RISINFTGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 116 bits (248), Expect = 4e-025
Identities = 59/143 (41%), Positives = 77/143 (53%)
Frame = +3 / -3
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R P + QPD+K GNS H H+ S+AP + EQQ+Y Q H Q T
Sbjct: 458 *MDQHVRPP*VA*XLQPDRKRTGNSVSVSHLHRLSKAPCAXXEQQNYLQPDHHQGTFADR 279
Query: 771 MY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHW 950
MY*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HW
Sbjct: 278 MY*KFGQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHW 99
Query: 951 YW*GGTWR*SSLLIRACSESQPH 1019
Y * + + +RACS H
Sbjct: 98 YL*AKSVPQHAWQVRACSRFPQH 30
Score = 113 bits (242), Expect = 3e-024
Identities = 62/146 (42%), Positives = 80/146 (54%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D QYI ++V * W C+* CCS +GA D LW W+ +
Sbjct: 202 NSRNSDYGLSQGSKC*GSDCPNFQYIRSANVP**WSGCK*FCCSXFAQGAFDSLWRWETD 381
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQ 590
EFP+ F SG* G R C +IQ
Sbjct: 382 TEFPVRFRSG*XXYATYGGRTCWSIQ 459
Score = 86.8 bits (183), Expect = 4e-016
Identities = 52/116 (44%), Positives = 62/116 (53%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLPEFSIHTVRE 290
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHS 591
CAL M L V LLL RS *+ M M ++ GVS+ F IWL+ W+A+M HS
Sbjct: 291 CALMMVGL*VILLLXXCARSL*QSMEMGNRHGVSSSFPIWLKXLCDLWRANMLVHS 458
>gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP066H03 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 701
Score = 351 bits (761), Expect = 7e-096
Identities = 143/190 (75%), Positives = 162/190 (85%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 132 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 311
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 312 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 491
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A+++ NT D
Sbjct: 492 RSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTXNTPD 671
Query: 486 DPHKRKPDIS 457
DP RKPDI+
Sbjct: 672 DPRMRKPDIT 701
Score = 208 bits (448), Expect = 1e-052
Identities = 109/175 (62%), Positives = 120/175 (68%)
Frame = +2 / -2
Query: 518 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVK 697
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV
Sbjct: 640 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 461
Query: 698 GSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLT 877
S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLT
Sbjct: 460 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLT 281
Query: 878 PMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
P+GLTLPQ S CGC RGSP*TS V V + LA A+P++F VP T V G
Sbjct: 280 PIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITFVFIVFTG 116
Score = 118 bits (252), Expect = 1e-025
Identities = 53/170 (31%), Positives = 98/170 (57%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + V ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 623 LLHSFSEFQHCEFSWVPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 444
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ A ++ ++I
Sbjct: 443 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIAASYSNWVNI 264
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L +H+Q NH+ L R+
Sbjct: 263 TPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKPQHIQCANHVCLYCLHRI 114
Score = 55.6 bits (115), Expect = 9e-007
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACG 599
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 380 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGRGEYW 559
Query: 598 AIQPG*PWRVHHA*ACQGCPGHHR 527
A P R+H+ C G HR
Sbjct: 560 AY*SWEPRRIHNVGTR*SCEGAHR 631
Score = 35.9 bits (72), Expect = 0.73
Identities = 25/73 (34%), Positives = 32/73 (43%)
Frame = -1 / +1
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 379 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 558
Query: 599 GHSTWVTLASSPC 561
G T +S C
Sbjct: 559 GLLILGTQENSQC 597
Score = 33.6 bits (67), Expect(2) = 0.079
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 426 *QHVHHQCSCEDHKY*KF 373
Score = 23.1 bits (44), Expect(2) = 0.079
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3 / -3
Query: 837 FQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHR 941
F +A H +S + *H P+ P A E HHR
Sbjct: 321 FLPHAFLHHSSFLLQLG*HYPNIPPFVDAQEGHHR 217
>gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_H09_A029 5', mRNA sequence
Length = 812
Score = 351 bits (761), Expect = 7e-096
Identities = 143/189 (75%), Positives = 161/189 (85%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 244 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 423
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 424 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 603
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT D
Sbjct: 604 RSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPD 783
Query: 486 DPHKRKPDI 460
DP RKPDI
Sbjct: 784 DPRMRKPDI 810
Score = 219 bits (473), Expect = 4e-056
Identities = 118/195 (60%), Positives = 131/195 (67%)
Frame = +2 / -1
Query: 458 LMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPS 637
+MSG + GSS VF A GSM S+T ASS++VNSPG PRL GP SPSIS IRPS
Sbjct: 812 VMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPS 633
Query: 638 TRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPR 817
T SET KL V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+
Sbjct: 632 TMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL 453
Query: 818 W*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPS 997
*S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P+
Sbjct: 452 **SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPN 273
Query: 998 MFRVPTTLVLCYHKG 1042
+F VP TLV G
Sbjct: 272 IFNVPITLVFIVFTG 228
Score = 119 bits (255), Expect = 4e-026
Identities = 52/170 (30%), Positives = 98/170 (57%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 735 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 556
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 555 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNI 376
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 375 TPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 226
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 492 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 659
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 491 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 670
Query: 599 G 597
G
Sbjct: 671 G 673
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 538 *QHVHHQCSCEDHKY*KF 485
>gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_H04_A029 3', mRNA sequence
Length = 791
Score = 348 bits (754), Expect = 6e-095
Identities = 138/192 (71%), Positives = 160/192 (83%)
Frame = -3 / +1
Query: 945 EVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYG 766
EVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR LE+RIARIFNTYG
Sbjct: 1 EVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYG 180
Query: 765 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNL 586
PRM IDDGRVVSNF+AQALR EP+TV G QTRSF YVSD+V+GL++LMEG++ GP NL
Sbjct: 181 PRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRLMEGDNTGPINL 360
Query: 585 GNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREG 406
GNPGEFTMLELA+ V++ I+ + +E +NT DDP KRKPDI++A LGWEPK+ LREG
Sbjct: 361 GNPGEFTMLELAEAVKEFIETSTTVEMVENTPDDPRKRKPDITKATTLLGWEPKVTLREG 540
Query: 405 LPLMVSDFRKRI 370
LPLM DFR+R+
Sbjct: 541 LPLMAEDFRERL 576
Score = 217 bits (468), Expect = 2e-055
Identities = 114/190 (60%), Positives = 127/190 (66%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS + G PSR+ GSHPR+ +A +MSG L GSS VF S S+ S+T A
Sbjct: 572 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSINSFTASA 393
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS L A*A KLL
Sbjct: 392 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 213
Query: 734 TTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VST 913
TTRPSSM +RGP VL IRA+ S W*S + VSA R PSS*QLLTP+GLTLPQ S
Sbjct: 212 TTRPSSMFIRGP*VLNIRAMRISNPCCLW*SNIRVSATRFPSS*QLLTPIGLTLPQYSSF 33
Query: 914 CGCWRGSP*T 943
GC RGSP T
Sbjct: 32 *GCSRGSPYT 3
Score = 68.4 bits (143), Expect(2) = 2e-016
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++++ P +++FH + T+N IRNI E GL S ++ +
Sbjct: 411 LLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSHWFTSKG 232
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 231 LSNKIADNTAIVNVHSWPIGIK 166
Score = 42.8 bits (87), Expect(3) = 4e-014
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +3
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 171 YLWATNEH*RWPCCQQFYCSG 233
Score = 38.6 bits (78), Expect(3) = 4e-014
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2 / +3
Query: 940 LW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
+W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 6 IW*SSGTSSKGRILGQCQPNWCKKLL**GEA 98
Score = 38.2 bits (77), Expect(2) = 2e-016
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3 / -2
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH N+ H+ *HCPS P EDHH
Sbjct: 100 HASPHHNNFLHQLG*HCPSILPFEDVPEDHH 8
Score = 38.2 bits (77), Expect(2) = 1e-006
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / -3
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL LI+T T+ +DIAPV LR+ +RITI
Sbjct: 99 TLPLIITTSYTNWVDIAPVFFLLRMFQRITI 7
Score = 35.4 bits (71), Expect(2) = 1e-006
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -2
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 232 PEQ*NC*QHGHRQCSFVAHRY* 167
Score = 34.5 bits (69), Expect(3) = 4e-014
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +2
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 269 EHKPEASAMFLIWLMV*FG*WKEIILG 349
Score = 30.4 bits (60), Expect(3) = 8e-004
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / +3
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A + RV++A C C G
Sbjct: 276 NPKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SCEG 410
Score = 25.4 bits (49), Expect(3) = 8e-004
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASV 846
MVIL + + + TGAMS V V MR SV
Sbjct: 8 MVILWNILKRKNTGAMSTQLV*EVVMMRGSV 100
Score = 24.0 bits (46), Expect(3) = 8e-004
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 194 LTMAVLSAILLLR 232
>gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E05_A029 5', mRNA sequence
Length = 774
Score = 347 bits (751), Expect = 2e-094
Identities = 141/187 (75%), Positives = 159/187 (85%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 212 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 391
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 392 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 571
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
RSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT D
Sbjct: 572 RSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPD 751
Query: 486 DPHKRKP 466
DP RKP
Sbjct: 752 DPRMRKP 772
Score = 216 bits (467), Expect = 2e-055
Identities = 117/193 (60%), Positives = 129/193 (66%)
Frame = +2 / -1
Query: 464 SGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTR 643
SG + GSS VF A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST
Sbjct: 774 SGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTM 595
Query: 644 SETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW* 823
SET KL V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *
Sbjct: 594 SET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL** 415
Query: 824 SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMF 1003
S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++F
Sbjct: 414 SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIF 235
Query: 1004 RVPTTLVLCYHKG 1042
VP TLV G
Sbjct: 234 NVPITLVFIVFTG 196
Score = 119 bits (255), Expect = 4e-026
Identities = 52/170 (30%), Positives = 98/170 (57%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 703 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 524
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 523 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNI 344
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 343 TPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 194
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 460 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 627
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +3
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 459 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 638
Query: 599 G 597
G
Sbjct: 639 G 641
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 506 *QHVHHQCSCEDHKY*KF 453
>gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_E12_A029 3', mRNA sequence
Length = 749
Score = 347 bits (751), Expect = 2e-094
Identities = 136/158 (86%), Positives = 153/158 (96%)
Frame = -3 / -3
Query: 831 TMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQY 652
TMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+
Sbjct: 747 TMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF 568
Query: 651 VSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKR 472
VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKR
Sbjct: 567 VSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKR 388
Query: 471 KPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
KPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 387 KPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 274
Score = 245 bits (530), Expect = 5e-064
Identities = 114/157 (72%), Positives = 123/157 (78%)
Frame = +2 / +2
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 278 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 457
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 458 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 637
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMV 832
TKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V
Sbjct: 638 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIV 748
Score = 112 bits (240), Expect = 5e-024
Identities = 46/104 (44%), Positives = 68/104 (65%)
Frame = +1 / +1
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 433 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 612
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIH 828
LL Q LSNK+T N I+ AH+R +CIE++ +PNL + + V+IH
Sbjct: 613 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIH 744
Score = 89.0 bits (188), Expect = 7e-017
Identities = 44/113 (38%), Positives = 60/113 (53%)
Frame = -2 / -2
Query: 832 DHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPI 653
D+GL + *G D + QYI ++V * W C+* CCSG +GA D LW W+ + EFP+
Sbjct: 748 DYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPV 569
Query: 652 CF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
F SG* G R C +IQ W +++ GC G +R D V +H
Sbjct: 568 RFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 410
Score = 68.9 bits (144), Expect = 9e-011
Identities = 37/89 (41%), Positives = 46/89 (51%)
Frame = +3 / +3
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 453 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 632
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQ 803
EQQ+Y Q H Q T MY*++ +S PQ
Sbjct: 633 EQQNYLQPDHHQGTFADRMY*KFEQSEPQ 719
Score = 64.3 bits (134), Expect = 2e-009
Identities = 38/89 (42%), Positives = 46/89 (51%)
Frame = -1 / -1
Query: 827 WITTVVPTLRLGSHVSSIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMF 648
WI T LR G SIH CAL M L V LLLR RS *+ M M ++ GVS+ F
Sbjct: 743 WIITGEQMLRFGLLEFSIHTVRECALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSF 564
Query: 647 LIWLRV**S*WKASMWGHSTWVTLASSPC 561
IWL+ W+A+M HS L + C
Sbjct: 563 PIWLKALCDLWRANMLVHSILGILGNLQC 477
>gb|BI202802.1|BI202802 NXPV_090_F11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_090_F11 5' similar to Arabidopsis
thaliana sequence At3g62830 dTDP-glucose 4-6-dehydratase
homolog D18 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 500
Score = 346 bits (749), Expect = 3e-094
Identities = 140/158 (88%), Positives = 146/158 (92%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVA LRKEPLTVYGDGKQT
Sbjct: 203 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAXXLRKEPLTVYGDGKQT 382
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLEL 553
RSFQ+VSD V M+L EGEHVGPFNLGNP EFTML L
Sbjct: 383 RSFQFVSDXVXXXMRLXEGEHVGPFNLGNPXEFTMLXL 496
Score = 243 bits (526), Expect = 2e-063
Identities = 116/163 (71%), Positives = 123/163 (75%)
Frame = +2 / -3
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
S ++VNS G PRLNGPTCSPS S I T SET WKL VCFPSP*TVKGS ATKLL
Sbjct: 495 SXNIVNSXGFPRLNGPTCSPSXSRIXXXTXSETNWKLRVCFPSP*TVKGSLRXXXATKLL 316
Query: 734 TTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VST 913
TTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ* S
Sbjct: 315 TTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV 136
Query: 914 CGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
GC RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 135 *GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 7
Score = 161 bits (346), Expect = 1e-038
Identities = 69/153 (45%), Positives = 100/153 (65%)
Frame = +1 / -2
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H + R+ ++EW +M A H N I N LETP L I+I+ Q LL Q SNK+T N
Sbjct: 487 HCKFXRIPKIEWTNMFALXXSHXXXNXIGNELETPCLFPISIDCQRLLAQXXSNKITYNP 308
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRV 921
I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IAPVS LR+
Sbjct: 307 TIIKAHSRTVCIENSGNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRM 128
Query: 922 LERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
+RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 127 FKRISINFTGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 113 bits (241), Expect = 4e-024
Identities = 57/143 (39%), Positives = 75/143 (52%)
Frame = +3 / -1
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R + QP +K GNS H H+ S+AP + EQQ+Y Q H Q T
Sbjct: 458 *MDQHVRPXXVAXXXQPXRKRTGNSVSVSHLHRLSKAPCAXXEQQNYLQPDHHQGTFADR 279
Query: 771 MY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHW 950
MY*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HW
Sbjct: 278 MY*KFGQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHW 99
Query: 951 YW*GGTWR*SSLLIRACSESQPH 1019
Y * + + +RACS H
Sbjct: 98 YL*AKSVPQHAWQVRACSRFPQH 30
Score = 108 bits (230), Expect = 1e-022
Identities = 59/146 (40%), Positives = 77/146 (52%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D QYI ++V * W C+* CCS +GA D LW W+ +
Sbjct: 202 NSRNSDYGLSQGSKC*GSDCPNFQYIRSANVP**WSGCK*FCCSXXAQGAFDSLWRWETD 381
Query: 667 QEFPICF*SG*GSDEADGRRACGAIQ 590
EFP+ F G R C +IQ
Sbjct: 382 TEFPVRFRXGXXXYATXXGRTCWSIQ 459
Score = 79.0 bits (166), Expect = 8e-014
Identities = 52/126 (41%), Positives = 62/126 (49%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLPEFSIHTVRE 290
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVT 579
CAL M L V LLL RS *+ M M ++ GVS+ F WL +A+M HS
Sbjct: 291 CALMMVGL*VILLLXXCARSL*QSMEMGNRHGVSSSFPXWLXXXCDXXRANMLVHSILGI 470
Query: 578 LASSPC 561
L + C
Sbjct: 471 LXNLQC 488
>gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_H09_A029 5', mRNA sequence
Length = 786
Score = 341 bits (738), Expect = 1e-092
Identities = 134/158 (84%), Positives = 151/158 (95%)
Frame = -3 / -2
Query: 831 TMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQY 652
TMDYHRGAN+ VRIARI NTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+
Sbjct: 785 TMDYHRGANVRVRIARISNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF 606
Query: 651 VSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKR 472
VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKR
Sbjct: 605 VSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKR 426
Query: 471 KPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
KPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 425 KPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 312
Score = 238 bits (515), Expect = 6e-062
Identities = 111/157 (70%), Positives = 121/157 (77%)
Frame = +2 / +1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 316 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 495
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 496 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 675
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMV 832
TKLLTTRPSS H+RGPYV +IRAI T AP *S+V
Sbjct: 676 TKLLTTRPSSRHIRGPYVXEIRAIRTLTFAPL**SIV 786
Score = 106 bits (226), Expect = 4e-022
Identities = 44/104 (42%), Positives = 66/104 (63%)
Frame = +1 / +3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 471 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 650
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIH 828
LL Q LSNK+T N I+ AH+R +CI ++ +PN + + V+IH
Sbjct: 651 RLLAQSLSNKITYNPTIIKAHSRTVCIXNSSNPNPHICSPVIIH 782
Score = 84.0 bits (177), Expect = 2e-015
Identities = 42/113 (37%), Positives = 58/113 (51%)
Frame = -2 / -1
Query: 832 DHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPI 653
D+GL + G D + YI ++V * W C+* CCSG +GA D LW W+ + EFP+
Sbjct: 786 DYGLSQGSKCEGSDCSNFXYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPV 607
Query: 652 CF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
F SG* G R C +IQ W +++ GC G +R D V +H
Sbjct: 606 RFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 448
Score = 64.3 bits (134), Expect = 2e-009
Identities = 35/88 (39%), Positives = 44/88 (50%)
Frame = +3 / +2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 491 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 670
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*P 800
EQQ+Y Q H Q T MY ++ +S P
Sbjct: 671 EQQNYLQPDHHQGTFADRMYXKFEQSEP 754
Score = 54.2 bits (112), Expect = 2e-006
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = -1 / -3
Query: 776 IHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWG 597
IH CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+ W+A+M
Sbjct: 730 IHTVRECALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLV 551
Query: 596 HSTWVTLASSPC 561
HS L + C
Sbjct: 550 HSILGILGNLQC 515
>gb|BQ696316.1|BQ696316 NXPV_037_H09_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_037_H09 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 487
Score = 339 bits (734), Expect = 4e-092
Identities = 137/155 (88%), Positives = 143/155 (92%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQ LRKEPLTVYGDGKQT
Sbjct: 203 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQXLRKEPLTVYGDGKQT 382
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTM 562
RSFQ+VSDLVE M+L EH PFNLGNP EFTM
Sbjct: 383 RSFQFVSDLVEXXMRLXXXEHXXPFNLGNPXEFTM 487
Score = 238 bits (514), Expect = 8e-062
Identities = 115/160 (71%), Positives = 121/160 (75%)
Frame = +2 / -2
Query: 563 MVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTR 742
+VNS G PRLNG CS IS I STRSET WKL VCFPSP*TVKGS *ATKLLTTR
Sbjct: 486 IVNSXGFPRLNGXXCSXXISRIXXSTRSETNWKLRVCFPSP*TVKGSLRKX*ATKLLTTR 307
Query: 743 PSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGC 922
PSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ* S GC
Sbjct: 306 PSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV*GC 127
Query: 923 WRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 126 SRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 7
Score = 164 bits (353), Expect = 1e-039
Identities = 70/153 (45%), Positives = 101/153 (66%)
Frame = +1 / -1
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H + R+ ++EW M + H NQI N LETP L I+I+ Q LL Q LSNK+T N
Sbjct: 487 HCKFXRIPKIEWXXMFXLXKSHXXFNQIGNELETPCLFPISIDCQRLLAQXLSNKITYNP 308
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRV 921
I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IAPVS LR+
Sbjct: 307 TIIKAHSRTVCIENSGNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRM 128
Query: 922 LERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
+RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 127 FKRISINFTGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 113 bits (241), Expect = 4e-024
Identities = 58/143 (40%), Positives = 76/143 (53%)
Frame = +3 / -3
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R + QPD+K GNS H H+ S+AP + EQQ+Y Q H Q T
Sbjct: 458 *MXXHVRPX*VA*XXQPDRKRTGNSVSVSHLHRLSKAPCAXXEQQNYLQPDHHQGTFADR 279
Query: 771 MY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHW 950
MY*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HW
Sbjct: 278 MY*KFGQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHW 99
Query: 951 YW*GGTWR*SSLLIRACSESQPH 1019
Y * + + +RACS H
Sbjct: 98 YL*AKSVPQHAWQVRACSRFPQH 30
Score = 105 bits (224), Expect = 8e-022
Identities = 57/131 (43%), Positives = 74/131 (56%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D QYI ++V * W C+* CCS +GA D LW W+ +
Sbjct: 202 NSRNSDYGLSQGSKC*GSDCPNFQYIRSANVP**WSGCK*FCCSXFAQGAFDSLWRWETD 381
Query: 667 QEFPICF*SG* 635
EFP+ F SG*
Sbjct: 382 TEFPVRFRSG* 414
Score = 78.0 bits (164), Expect = 1e-013
Identities = 47/101 (46%), Positives = 54/101 (53%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLPEFSIHTVRE 290
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWL 636
CAL M L V LLL RS *+ M M ++ GVS+ F IWL
Sbjct: 291 CALMMVGL*VILLLXXCARSL*QSMEMGNRHGVSSSFPIWL 413
>gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_017_A02 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 567
Score = 336 bits (728), Expect = 2e-091
Identities = 136/162 (83%), Positives = 151/162 (93%)
Frame = -3 / +2
Query: 852 KRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK 673
KRTAETLTMDYHRGAN+EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK
Sbjct: 2 KRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK 181
Query: 672 QTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNT 493
QTRSFQYVSDLV+GL++LME HVGPFNLGNPGEFTMLELA+VV++TID +ARIEF++NT
Sbjct: 182 QTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENT 361
Query: 492 QDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
DDPHKRKPDI++AK+ L WEP+I LRE LMV DFRKR+F
Sbjct: 362 ADDPHKRKPDITKAKDLLKWEPRISLREXXXLMVEDFRKRVF 487
Score = 221 bits (477), Expect = 1e-056
Identities = 111/162 (68%), Positives = 123/162 (75%)
Frame = +2 / -1
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ S + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 486 KTRLRKSSTINXXXSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 307
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATK 727
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TVKGS SA*ATK
Sbjct: 306 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 127
Query: 728 LLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRL 853
LLTTRPSSMH+ GPYVL IRA+ TS LAPR *S+V VSAVRL
Sbjct: 126 LLTTRPSSMHILGPYVLNIRAMRTSTLAPR**SIVKVSAVRL 1
Score = 141 bits (302), Expect = 1e-032
Identities = 55/113 (48%), Positives = 80/113 (70%)
Frame = +1 / -3
Query: 511 DPCVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITIN 690
+PC + NL KL H EL+R+ ++E +M+ FHQ +Q++NQIRNIL+ P L ++TIN
Sbjct: 343 NPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVTIN 164
Query: 691 RQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCT 849
Q QCLSNKV +NTAI++AH+ +IC+E TC+ +L +G V++H Q SCT
Sbjct: 163 CQRFFAQCLSNKVANNTAIIDAHSGSICVEYTCNADLHIGPPVIVHRQSLSCT 5
Score = 121 bits (259), Expect = 1e-026
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = -2 / +1
Query: 853 QAYS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WK 674
Q YS*+ D GL P Q G TY+Q+IW +VH WPCC LCCSGT + D LW*
Sbjct: 1 QTYS*DFDDGLSPGGQCGGPHCTYIQHIWTQNVHR*WPCC*QLCCSGTAQRTFDSLW*R* 180
Query: 673 ANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHR 527
N E +CF* G* +D DG++ C Q WRVH AC GC ++R
Sbjct: 181 TNTELSVCF*FG*WTDSTDGKQPCWTFQSWQSWRVHDVRACSGCERNNR 327
Score = 98.2 bits (208), Expect = 1e-019
Identities = 49/102 (48%), Positives = 57/102 (55%)
Frame = +3 / -2
Query: 543 QPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQ 722
QP QA *T Q * H PS S QP+QKH +S F + HHK S+ +VPEQ
Sbjct: 311 QPEQALTS*TLQDCQD*KVQHGCFPSVESVHQPNQKHTESSVFVYRHHKLSKVLCAVPEQ 132
Query: 723 QSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLY 848
QS *QHGH +CT HM * YV+ P W G +P S QLY
Sbjct: 131 QSC*QHGHHRCTFWVHMC*IYVQCGPPHWPPGDSPSSKSQLY 6
Score = 86.3 bits (182), Expect = 5e-016
Identities = 47/97 (48%), Positives = 55/97 (56%)
Frame = -1 / +3
Query: 851 SVQLKR*PWITTVVPTLRLGSHVSSIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMES 672
+VQL+ * W T P R HV S HM CA MAVL TLLLRH ++ *+FMV +
Sbjct: 3 NVQLRL*RWTITGGPMWRSALHVYSTHMDPECASMMAVLLATLLLRHCAKNL*QFMVTVN 182
Query: 671 KPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
K G +MFLIWL * *WK +M S L SS C
Sbjct: 183 KHGAFSMFLIWLMD*FD*WKTTMLDLSILAILESSRC 293
>gb|BG317512.1|BG317512 NXPV_002_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_002_F10 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 483
Score = 333 bits (722), Expect = 2e-090
Identities = 135/153 (88%), Positives = 141/153 (92%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQT
Sbjct: 203 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQT 382
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEF 568
RSFQ+VSDLV M+L EH PFNLGNP EF
Sbjct: 383 RSFQFVSDLVXXXMRLXXXEHXXPFNLGNPXEF 481
Score = 237 bits (513), Expect = 1e-061
Identities = 115/159 (72%), Positives = 120/159 (75%)
Frame = +2 / -1
Query: 566 VNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRP 745
VNS G PRLNG CS IS I TRSET WKL VCFPSP*TVKGS A*ATKLLTTRP
Sbjct: 483 VNSXGFPRLNGXXCSXXISRIXXXTRSETNWKLRVCFPSP*TVKGSLRKA*ATKLLTTRP 304
Query: 746 SSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCW 925
SS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ* S GC
Sbjct: 303 SSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV*GCS 124
Query: 926 RGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 123 RGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 7
Score = 161 bits (346), Expect = 1e-038
Identities = 69/148 (46%), Positives = 99/148 (66%)
Frame = +1 / -3
Query: 577 RVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNA 756
R+ ++EW M + H NQI N LETP L I+I+ Q LL Q LSNK+T N I+ A
Sbjct: 472 RIPKIEWXXMFXXXKSHXXXNQIGNELETPCLFPISIDCQRLLAQSLSNKITYNPTIIKA 293
Query: 757 HARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERIT 936
H+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IAPVS LR+ +RI+
Sbjct: 292 HSRTVCIENSGNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRMFKRIS 113
Query: 937 IDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
I+ TGT +++ + L SEHVQ ++I
Sbjct: 112 INFTGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 117 bits (251), Expect = 1e-025
Identities = 59/143 (41%), Positives = 77/143 (53%)
Frame = +3 / -2
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R + QPD+K GNS H H+ S+AP + PEQQ+Y Q H Q T
Sbjct: 458 *MXXHVRXX*VA*XXQPDRKRTGNSVSVSHLHRLSKAPCAKPEQQNYLQPDHHQGTFADR 279
Query: 771 MY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHW 950
MY*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HW
Sbjct: 278 MY*KFGQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHW 99
Query: 951 YW*GGTWR*SSLLIRACSESQPH 1019
Y * + + +RACS H
Sbjct: 98 YL*AKSVPQHAWQVRACSRFPQH 30
Score = 108 bits (230), Expect = 1e-022
Identities = 57/130 (43%), Positives = 74/130 (56%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D QYI ++V * W C+* CCSG +GA D LW W+ +
Sbjct: 202 NSRNSDYGLSQGSKC*GSDCPNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETD 381
Query: 667 QEFPICF*SG 638
EFP+ F SG
Sbjct: 382 TEFPVRFRSG 411
Score = 79.9 bits (168), Expect = 4e-014
Identities = 48/101 (47%), Positives = 55/101 (54%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLPEFSIHTVRE 290
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWL 636
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL
Sbjct: 291 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWL 413
>gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA651 3' end, mRNA sequence
Length = 797
Score = 325 bits (705), Expect = 4e-088
Identities = 128/150 (85%), Positives = 145/150 (96%)
Frame = -3 / +1
Query: 807 NLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGL 628
N+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGL
Sbjct: 157 NVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL 336
Query: 627 MKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAK 448
M+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKRKPDI++AK
Sbjct: 337 MRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAK 516
Query: 447 EFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 517 DLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 606
Score = 239 bits (516), Expect = 4e-062
Identities = 109/147 (74%), Positives = 117/147 (79%)
Frame = +2 / -1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 602 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 423
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 422 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 243
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTS 802
TKLLTTRPSS H+RGPYVLKIRAI TS
Sbjct: 242 TKLLTTRPSSRHIRGPYVLKIRAIRTS 162
Score = 105 bits (224), Expect = 8e-022
Identities = 43/97 (44%), Positives = 63/97 (64%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 447 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 268
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKV 807
LL Q LSNK+T N I+ AH+R +CIE++ +PNL +
Sbjct: 267 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNI 157
Score = 84.0 bits (177), Expect = 2e-015
Identities = 41/103 (39%), Positives = 55/103 (53%)
Frame = -2 / +3
Query: 802 *G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDE 623
*G D + QYI ++V * W C+* CCSG +GA D LW W+ + EFP+ F SG*
Sbjct: 162 *GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPVRFRSG*RPYA 341
Query: 622 ADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
G R C +IQ W +++ GC G +R D V +H
Sbjct: 342 TYGGRTCWSIQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 470
Score = 68.9 bits (144), Expect = 9e-011
Identities = 37/89 (41%), Positives = 46/89 (51%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 427 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 248
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQ 803
EQQ+Y Q H Q T MY*++ +S PQ
Sbjct: 247 EQQNYLQPDHHQGTFADRMY*KFEQSEPQ 161
Score = 58.8 bits (122), Expect = 9e-008
Identities = 35/81 (43%), Positives = 43/81 (53%)
Frame = -1 / +2
Query: 803 LRLGSHVSSIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV** 624
LR G SIH CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+
Sbjct: 161 LRFGLLEFSIHTVRECALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALC 340
Query: 623 S*WKASMWGHSTWVTLASSPC 561
W+A+M HS L + C
Sbjct: 341 DLWRANMLVHSILGILGNLQC 403
>gb|DR094453.1|DR094453 STRR1_14_E02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_E02_A033 5', mRNA sequence
Length = 862
Score = 325 bits (703), Expect = 7e-088
Identities = 133/170 (78%), Positives = 148/170 (87%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 350 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 529
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 530 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 709
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNA 517
RSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A
Sbjct: 710 RSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSA 859
Score = 210 bits (452), Expect = 3e-053
Identities = 110/175 (62%), Positives = 121/175 (69%)
Frame = +2 / -2
Query: 518 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVK 697
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV
Sbjct: 858 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 679
Query: 698 GSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLT 877
S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLT
Sbjct: 678 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLT 499
Query: 878 PMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
P+GLTLPQ S CGC RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 498 PIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 334
Score = 119 bits (255), Expect = 4e-026
Identities = 52/170 (30%), Positives = 98/170 (57%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 841 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 662
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 661 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNI 482
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 481 TPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 332
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 598 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 765
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +3
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 597 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 776
Query: 599 G 597
G
Sbjct: 777 G 779
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 644 *QHVHHQCSCEDHKY*KF 591
>gb|BQ700846.1|BQ700846 NXRV112_B12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV112_B12 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 477
Score = 324 bits (702), Expect = 9e-088
Identities = 134/158 (84%), Positives = 140/158 (88%)
Frame = -3 / +1
Query: 1002 NMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMD 823
NMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKRTAETLTMD
Sbjct: 4 NMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRTAETLTMD 183
Query: 822 YHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSD 643
YHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+V D
Sbjct: 184 YHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVCD 363
Query: 642 LVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTI 529
LV GLM LMEG HVGP NL GE TM E V + TI
Sbjct: 364 LVXGLMXLMEGXHVGPLNLXXAGECTMGEXXXVGKXTI 477
Score = 236 bits (510), Expect = 3e-061
Identities = 111/158 (70%), Positives = 120/158 (75%)
Frame = +2 / -2
Query: 530 MVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFL 709
+V + T S +V+SP R NGPTC PSI IRPSTRS+T WKL VCFPSP*TVKGS
Sbjct: 476 IVXFPTXXXSPIVHSPAXXRFNGPTCXPSIXXIRPSTRSQTNWKLRVCFPSP*TVKGSLR 297
Query: 710 SA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGL 889
A*ATKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGL
Sbjct: 296 KA*ATKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGL 117
Query: 890 TLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMF 1003
TLPQ* S GC RGSP*TSLVLV + A A+PSMF
Sbjct: 116 TLPQ*ASV*GCSRGSP*TSLVLVSKKRAPTRLASPSMF 3
Score = 169 bits (364), Expect = 4e-041
Identities = 70/147 (47%), Positives = 99/147 (67%)
Frame = +1 / -1
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H +++WPHM A H+ H+ NQI N LETP L I+I+ Q LL Q LSNK+T N
Sbjct: 444 HCTFPSXXKIQWPHMXALHKXHKAXNQIANELETPCLFPISIDCQRLLAQSLSNKITYNP 265
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRV 921
I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IAPVS LR+
Sbjct: 264 TIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRM 85
Query: 922 LERITIDLTGTGEEEPGVDPLC*SEHV 1002
+RI+I+ TGT +++ + L SEHV
Sbjct: 84 FKRISINFTGTCKQKACPNTLGKSEHV 4
Score = 122 bits (261), Expect = 6e-027
Identities = 59/137 (43%), Positives = 77/137 (56%)
Frame = +3 / -3
Query: 594 MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGHM 773
MAPH P + QPD+K GNS H H+ S+AP + PEQQ+Y Q H Q T M
Sbjct: 412 MAPHVXPP*XA*GXQPDRKRTGNSVSVSHLHRLSKAPCAKPEQQNYLQPDHHQGTFADRM 233
Query: 774 Y*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHWY 953
Y*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HWY
Sbjct: 232 Y*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHWY 53
Query: 954 W*GGTWR*SSLLIRACS 1004
* + + +RACS
Sbjct: 52 L*AKSVPQHAWQVRACS 2
Score = 115 bits (245), Expect = 1e-024
Identities = 61/147 (41%), Positives = 81/147 (55%)
Frame = -2 / +3
Query: 1003 EHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQAYS*NVDHG 824
EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G S N D+G
Sbjct: 3 EHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*ENSRNSDYG 182
Query: 823 LPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF* 644
L + *G D + QYI ++V * W C+* CCSG +GA D LW W+ + EFP+
Sbjct: 183 LSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPVRLR 362
Query: 643 SG*GSDEADGRRACGAIQPG*PWRVHH 563
SG* G CGAI+ W +++
Sbjct: 363 SG*XPYAXYGGXTCGAIESXXCWGMYN 443
Score = 95.9 bits (203), Expect = 6e-019
Identities = 54/115 (46%), Positives = 62/115 (53%)
Frame = -1 / +2
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 68 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 247
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGH 594
CAL M L V LLLR RS *+ M M ++ GVS+ F IWL W+A MWGH
Sbjct: 248 CALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFAIWLXALCXLWRAXMWGH 412
>gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 5', mRNA sequence
Length = 835
Score = 319 bits (691), Expect(2) = 1e-087
Identities = 128/180 (71%), Positives = 148/180 (82%)
Frame = -3 / +3
Query: 909 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVS 730
E YWGNVNPIG+RSCYDEGKR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVS
Sbjct: 57 EEYWGNVNPIGLRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVS 236
Query: 729 NFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELA 550
NF+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA
Sbjct: 237 NFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELA 416
Query: 549 KVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 417 EAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 596
Score = 210 bits (453), Expect = 2e-053
Identities = 110/176 (62%), Positives = 120/176 (68%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 592 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 413
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLL
Sbjct: 412 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLL 233
Query: 734 TTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ 901
TTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLL P+GLTLPQ
Sbjct: 232 TTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLNPIGLTLPQ 65
Score = 89.0 bits (188), Expect = 7e-017
Identities = 37/125 (29%), Positives = 73/125 (58%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 431 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 252
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 251 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATS*SNRVNI 72
Query: 895 APVSL 909
P+ L
Sbjct: 71 TPIFL 57
Score = 46.4 bits (95), Expect(2) = 3e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 188 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 355
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 187 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 366
Query: 599 G 597
G
Sbjct: 367 G 369
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 234 *QHVHHQCSCEDHKY*KF 181
Score = 25.8 bits (50), Expect(2) = 1e-087
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 951 TSEVYGDPLQ 922
TSEVYGDPL+
Sbjct: 16 TSEVYGDPLE 45
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 530 MGTQGLST*RPTPYG*RFPPA 592
>gb|BQ696304.1|BQ696304 NXPV_037_G06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_037_G06 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 470
Score = 324 bits (701), Expect = 1e-087
Identities = 131/149 (87%), Positives = 137/149 (91%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQ LRKEPLTVYGDGKQT
Sbjct: 203 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQXLRKEPLTVYGDGKQT 382
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
RSFQ+VSDLV M+L EH PFNLGN
Sbjct: 383 RSFQFVSDLVXXXMRLXXXEHXXPFNLGN 469
Score = 227 bits (491), Expect = 1e-058
Identities = 110/153 (71%), Positives = 115/153 (75%)
Frame = +2 / -3
Query: 584 PRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMR 763
PRLNG CS IS I TRSET WKL VCFPSP*TVKGS *ATKLLTTRPSS H+R
Sbjct: 465 PRLNGXXCSXXISRIXXXTRSETNWKLRVCFPSP*TVKGSLRKX*ATKLLTTRPSSRHIR 286
Query: 764 GPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*T 943
GPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLPQ* S GC RGSP*T
Sbjct: 285 GPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV*GCSRGSP*T 106
Query: 944 SLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
SLVLV + A A+PSMF+VPTTLVL G
Sbjct: 105 SLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 7
Score = 158 bits (340), Expect = 8e-038
Identities = 68/147 (46%), Positives = 98/147 (66%)
Frame = +1 / -2
Query: 580 VTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAH 759
+ ++EW M + H NQI N LETP L I+I+ Q LL Q LSNK+T N I+ AH
Sbjct: 469 IPKIEWXXMFXXXKSHXXXNQIGNELETPCLFPISIDCQRLLAQXLSNKITYNPTIIKAH 290
Query: 760 ARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IAPVS LR+ +RI+I
Sbjct: 289 SRTVCIENSGNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRMFKRISI 110
Query: 940 DLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
+ TGT +++ + L SEHVQ ++I
Sbjct: 109 NFTGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 114 bits (243), Expect = 2e-024
Identities = 58/143 (40%), Positives = 76/143 (53%)
Frame = +3 / -1
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R + QPD+K GNS H H+ S+AP + EQQ+Y Q H Q T
Sbjct: 458 *MXXHVRXX*VA*XXQPDRKRTGNSVSVSHLHRLSKAPCAXXEQQNYLQPDHHQGTFADR 279
Query: 771 MY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHW 950
MY*++ +S PQ NP S F+L++ PH ++ RWD*HCPSK ED H+ HW
Sbjct: 278 MY*KFGQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHW 99
Query: 951 YW*GGTWR*SSLLIRACSESQPH 1019
Y * + + +RACS H
Sbjct: 98 YL*AKSVPQHAWQVRACSRFPQH 30
Score = 105 bits (223), Expect = 1e-021
Identities = 56/130 (43%), Positives = 73/130 (56%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKAN 668
S N D+GL + *G D QYI ++V * W C+* CCS +GA D LW W+ +
Sbjct: 202 NSRNSDYGLSQGSKC*GSDCPNFQYIRSANVP**WSGCK*FCCSXFAQGAFDSLWRWETD 381
Query: 667 QEFPICF*SG 638
EFP+ F SG
Sbjct: 382 TEFPVRFRSG 411
Score = 78.0 bits (164), Expect = 1e-013
Identities = 47/101 (46%), Positives = 54/101 (53%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLPEFSIHTVRE 290
Query: 758 CALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWL 636
CAL M L V LLL RS *+ M M ++ GVS+ F IWL
Sbjct: 291 CALMMVGL*VILLLXXCARSL*QSMEMGNRHGVSSSFPIWL 413
>gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_029_B09 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 627
Score = 322 bits (698), Expect = 3e-087
Identities = 127/153 (83%), Positives = 144/153 (94%)
Frame = -3 / +2
Query: 816 RGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 637
RGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDLV
Sbjct: 2 RGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 181
Query: 636 EGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDIS 457
EGLM+LMEGEHVGPFNLGNPGEFTMLELA+ V++TID NA+IEFR NT+DDPHKRKP +
Sbjct: 182 EGLMRLMEGEHVGPFNLGNPGEFTMLELAQXVKETIDTNAKIEFRPNTEDDPHKRKPXXT 361
Query: 456 RAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
+AK+ LGWEPK+ R+GLPLMV DFR+R+FGD+
Sbjct: 362 KAKDLLGWEPKVSXRKGLPLMVEDFRRRVFGDE 460
Score = 237 bits (513), Expect = 1e-061
Identities = 109/151 (72%), Positives = 116/151 (76%)
Frame = +2 / -1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP GS P S A + SG LCGSS VF NSI AL S+VS+
Sbjct: 456 SPKTRRRKSSTIRGRPFLXDTLGSQPSRSFALVXSGFLLCGSSSVFGLNSIFALVSIVSF 277
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
T ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 276 TXCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 97
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAP 814
TKLLTTRPSS H+RGPYVLKIRAI TS AP
Sbjct: 96 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFAP 4
Score = 102 bits (217), Expect = 7e-021
Identities = 42/97 (43%), Positives = 62/97 (63%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L L H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 301 CISIYCLLHXLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 122
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKV 807
LL Q LSNK+T N I+ AH+R +CIE++ +PNL +
Sbjct: 121 RLLAQSLSNKITYNPTIIKAHSRTVCIENSSNPNLNI 11
Score = 84.0 bits (177), Expect = 2e-015
Identities = 41/103 (39%), Positives = 55/103 (53%)
Frame = -2 / +1
Query: 802 *G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDE 623
*G D + QYI ++V * W C+* CCSG +GA D LW W+ + EFP+ F SG*
Sbjct: 16 *GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPVRFRSG*RPYA 195
Query: 622 ADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
G R C +IQ W +++ GC G +R D V +H
Sbjct: 196 TYGGRTCWSIQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 324
Score = 66.1 bits (138), Expect = 6e-010
Identities = 36/89 (40%), Positives = 45/89 (50%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P P * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 281 PSXPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 102
Query: 717 EQQSY*QHGHRQCTCEGHMY*RYVRS*PQ 803
EQQ+Y Q H Q T MY*++ +S PQ
Sbjct: 101 EQQNYLQPDHHQGTFADRMY*KFEQSEPQ 15
Score = 58.8 bits (122), Expect = 9e-008
Identities = 35/81 (43%), Positives = 43/81 (53%)
Frame = -1 / +3
Query: 803 LRLGSHVSSIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV** 624
LR G SIH CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+
Sbjct: 15 LRFGLLEFSIHTVRECALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALC 194
Query: 623 S*WKASMWGHSTWVTLASSPC 561
W+A+M HS L + C
Sbjct: 195 DLWRANMLVHSILGILGNLQC 257
>gb|BE241113.1|BE241113 NXNV_173_A08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_173_A08 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 526
Score = 302 bits (653), Expect = 5e-081
Identities = 124/173 (71%), Positives = 138/173 (79%)
Frame = -3 / +1
Query: 981 RINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANL 802
R+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR L
Sbjct: 1 RVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGL 180
Query: 801 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMK 622
E+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G Q RSF YVSD+V+GL++
Sbjct: 181 EIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQXRSFCYVSDMVDGLIR 360
Query: 621 LMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPD 463
LMEGE+ GP NLGNPGEFTMLELA+ V I+P+A ++ T DP KPD
Sbjct: 361 LMEGENTGPINLGNPGEFTMLELAEAVXXLIEPSAELKMTXXTPXDPRMXKPD 519
Score = 191 bits (411), Expect = 1e-047
Identities = 105/171 (61%), Positives = 113/171 (66%)
Frame = +2 / -3
Query: 461 MSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPST 640
MSG + GS V A GSM T ASS++VNSPG PRL GP SPSIS IRPST
Sbjct: 521 MSGXXIRGSXGVXXVIFNSAEGSMSXXTASASSNIVNSPGFPRLIGPVFSPSISLIRPST 342
Query: 641 RSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW 820
SET KL P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+
Sbjct: 341 MSET*QKLRX*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL* 162
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
*S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 161 *SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILA 9
Score = 100 bits (214), Expect = 2e-020
Identities = 43/140 (30%), Positives = 83/140 (59%)
Frame = +1 / -2
Query: 544 NLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSN 723
+ + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +CL N
Sbjct: 438 SFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSECLCN 259
Query: 724 KVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPV 903
++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I P+
Sbjct: 258 EIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPI 79
Query: 904 SLHLRVLERITIDLTGTGEE 963
L L +L+R+TID G++
Sbjct: 78 FLLLWMLKRVTIDFRC*GQQ 19
Score = 45.5 bits (93), Expect = 0.001
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W + + + F* G* ++ GR
Sbjct: 204 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSXPQLLLRF*HG*WPNQTYGR 371
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 250 *QHVHHQCSCEDHKY*KF 197
Score = 32.7 bits (65), Expect = 6.7
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ P S FL WL * WK +
Sbjct: 203 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALXPAASATFLTWLMA*SDLWKGRIL 382
Query: 599 G 597
G
Sbjct: 383 G 385
>gb|BQ696029.1|BQ696029 NXPV_035_F01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_035_F01 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 536
Score = 301 bits (652), Expect = 7e-081
Identities = 126/178 (70%), Positives = 141/178 (79%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 811
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 180
Query: 810 ANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEG 631
LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V+G
Sbjct: 181 HGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDG 360
Query: 630 LMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDIS 457
L++LMEGE+ GP NLGNPGEFTML LA+ V I+P+A + +NT D DI+
Sbjct: 361 LIRLMEGENTGPINLGNPGEFTMLXLAEAVXXLIEPSAEXKMTENTPDXXRMXXXDIT 534
Score = 190 bits (410), Expect = 2e-047
Identities = 104/172 (60%), Positives = 114/172 (66%)
Frame = +2 / -1
Query: 458 LMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPS 637
+MS + SS VF A GSM +T A ++VNSPG PRL GP SPSIS IRPS
Sbjct: 533 VMSXXXIRXSSGVFSVIFXSAEGSMSXFTASAXXNIVNSPGFPRLIGPVFSPSISLIRPS 354
Query: 638 TRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPR 817
T SET KL V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+
Sbjct: 353 TMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL 174
Query: 818 W*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
*S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 173 **SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILA 18
Score = 100 bits (213), Expect = 3e-020
Identities = 43/140 (30%), Positives = 83/140 (59%)
Frame = +1 / -3
Query: 544 NLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSN 723
+ + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +CL N
Sbjct: 447 SFSEXQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSECLCN 268
Query: 724 KVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPV 903
++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I P+
Sbjct: 267 EIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPI 88
Query: 904 SLHLRVLERITIDLTGTGEE 963
L L +L+R+TID G++
Sbjct: 87 FLLLWMLKRVTIDFRC*GQQ 28
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 213 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 380
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 212 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 391
Query: 599 G 597
G
Sbjct: 392 G 394
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 259 *QHVHHQCSCEDHKY*KF 206
>gb|BQ698583.1|BQ698583 NXPV_071_F08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_071_F08 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 516
Score = 301 bits (652), Expect = 7e-081
Identities = 124/168 (73%), Positives = 139/168 (82%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 811
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 180
Query: 810 ANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEG 631
LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V+G
Sbjct: 181 HGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDG 360
Query: 630 LMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
L++LMEGE+ GP NLGNPGEFTML LA+ V I+P+A ++ +NT D
Sbjct: 361 LIRLMEGENTGPINLGNPGEFTMLXLAEAVXXLIEPSAELKMTENTPD 504
Score = 186 bits (401), Expect = 3e-046
Identities = 102/163 (62%), Positives = 109/163 (66%)
Frame = +2 / -2
Query: 485 SSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKL 664
SS VF A GSM T A ++VNSPG PRL GP SPSIS IRPST SET KL
Sbjct: 506 SSGVFSVIFNSAEGSMXXXTASAXXNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKL 327
Query: 665 LVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSA 844
V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA
Sbjct: 326 RV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSA 147
Query: 845 VRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 146 TRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILA 18
Score = 100 bits (212), Expect = 4e-020
Identities = 43/135 (31%), Positives = 81/135 (60%)
Frame = +1 / -1
Query: 559 KHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDN 738
+H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +CL N++ +N
Sbjct: 432 QHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSECLCNEIANN 253
Query: 739 TAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLR 918
T+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I P+ L L
Sbjct: 252 TSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLW 73
Query: 919 VLERITIDLTGTGEE 963
+L+R+TID G++
Sbjct: 72 MLKRVTIDFRC*GQQ 28
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 213 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 380
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 212 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 391
Query: 599 G 597
G
Sbjct: 392 G 394
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 259 *QHVHHQCSCEDHKY*KF 206
>gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B11_A029 3', mRNA sequence
Length = 729
Score = 238 bits (515), Expect(2) = 2e-080
Identities = 96/125 (76%), Positives = 108/125 (86%)
Frame = -3 / +1
Query: 909 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVS 730
E YWGNVNPIGVRSCYDEGKR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVS
Sbjct: 1 EEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVS 180
Query: 729 NFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELA 550
NF+AQALR EP+TV G QTRSF YVSD+V+GL++LMEG++ GP NLGNPGEFTMLELA
Sbjct: 181 NFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELA 360
Query: 549 KVVQD 535
+ V++
Sbjct: 361 EAVKE 375
Score = 165 bits (354), Expect = 9e-040
Identities = 85/137 (62%), Positives = 95/137 (69%)
Frame = +2 / -2
Query: 491 WVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLV 670
W L I ++ + +S+T ASSS+VNSPG PR GP SPSIS I+PST SET KL V
Sbjct: 419 WFPLAWIIWSVFNHLSFTASASSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRV 240
Query: 671 CFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVR 850
C P TV GS L A*A KLLTTRPSSM +RGP VL IRAI S W*S + VSA R
Sbjct: 239 CVPGAWTVIGSPLRA*AIKLLTTRPSSMFIRGP*VLNIRAIRISNPCCLW*SNIRVSATR 60
Query: 851 LPSS*QLLTPMGLTLPQ 901
PSS*QLLTP+GLTLPQ
Sbjct: 59 FPSS*QLLTPIGLTLPQ 9
Score = 82.6 bits (174), Expect(2) = 2e-080
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -3 / +3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
E +NT DDP KRKPDI++A LGWEPK+ LREGLPLM DFR+R+
Sbjct: 375 EMVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 515
Score = 68.4 bits (143), Expect(3) = 1e-023
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++++ P +++FH + T+N IRNI E GL S ++ +
Sbjct: 375 LLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSHWFTSKG 196
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 195 LSNKIADNTAIVNVHSWPIGIK 130
Score = 50.6 bits (104), Expect(3) = 1e-023
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS + G PSR+ GSHPR+ +A +MSG L GSS VF
Sbjct: 511 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVF 386
Score = 42.8 bits (87), Expect(3) = 3e-011
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +3
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 135 YLWATNEH*RWPCCQQFYCSG 197
Score = 35.4 bits (71), Expect(2) = 6e-004
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -3
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 196 PEQ*NC*QHGHRQCSFVAHRY* 131
Score = 34.5 bits (69), Expect(3) = 3e-011
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +2
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 233 EHKPEASAMFLIWLMV*FG*WKEIILG 313
Score = 30.4 bits (60), Expect(2) = 0.35
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / +3
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A + RV++A C C G
Sbjct: 240 NPKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SCEG 374
Score = 29.9 bits (59), Expect(3) = 1e-023
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / -3
Query: 846 YACPHRNSS*HRWD*HCPS 902
+A PH NS H+ *HCPS
Sbjct: 64 HASPHHNSFLHQLG*HCPS 8
Score = 28.6 bits (56), Expect(2) = 6e-004
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / -1
Query: 847 TLALIVTAPDTDGIDIAPV 903
TL LI+TA T+ +DIAPV
Sbjct: 63 TLPLIITASYTNWVDIAPV 7
Score = 28.6 bits (56), Expect(3) = 3e-011
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2 / +3
Query: 904 LLGQCQSHRCQELLR*GQA 848
+LGQCQ + C++LL *G+A
Sbjct: 6 ILGQCQPNWCKKLL**GEA 62
Score = 24.0 bits (46), Expect(2) = 0.35
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 158 LTMAVLSAILLLR 196
>gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_D08_A029 3', mRNA sequence
Length = 855
Score = 292 bits (631), Expect = 6e-078
Identities = 117/168 (69%), Positives = 138/168 (82%)
Frame = -3 / +1
Query: 873 RSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPL 694
RSCYDEGKR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+
Sbjct: 1 RSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPM 180
Query: 693 TVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNAR 514
TV G QTRSF YVSD+V+GL++LMEG++ GP NLGNPGEFTMLELA+ V++ I+ +
Sbjct: 181 TVQAPGTQTRSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTT 360
Query: 513 IEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+E +NT DDP KRKPDI++A LGWEPK+ LREGLPLM DFR+R+
Sbjct: 361 VEMVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 504
Score = 183 bits (394), Expect = 3e-045
Identities = 97/166 (58%), Positives = 109/166 (65%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS + G PSR+ GSHPR+ +A +MSG L GSS VF S S+ S+T A
Sbjct: 500 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 321
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS L A*A KLL
Sbjct: 320 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 141
Query: 734 TTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QL 871
TTRPSSM +RGP VL IRA+ S W*S + VSA R PSS*QL
Sbjct: 140 TTRPSSMFIRGP*VLNIRAMRISNPCCLW*SNIRVSATRFPSS*QL 3
Score = 68.4 bits (143), Expect = 1e-010
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++++ P +++FH + T+N IRNI E GL S ++ +
Sbjct: 339 LLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSHWFTSKG 160
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 159 LSNKIADNTAIVNVHSWPIGIK 94
Score = 42.8 bits (87), Expect(2) = 8e-008
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +3
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 99 YLWATNEH*RWPCCQQFYCSG 161
Score = 35.4 bits (71), Expect = 1.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -3
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 160 PEQ*NC*QHGHRQCSFVAHRY* 95
Score = 34.5 bits (69), Expect(2) = 8e-008
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +2
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 197 EHKPEASAMFLIWLMV*FG*WKEIILG 277
Score = 30.4 bits (60), Expect(2) = 0.35
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / +3
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A + RV++A C C G
Sbjct: 204 NPKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SCEG 338
Score = 24.0 bits (46), Expect(2) = 0.35
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 122 LTMAVLSAILLLR 160
>gb|DR069574.1|DR069574 RTDK1_8_C04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_8_C04_A029 3', mRNA sequence
Length = 912
Score = 290 bits (627), Expect = 2e-077
Identities = 119/149 (79%), Positives = 129/149 (86%)
Frame = -3 / -1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 447 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 268
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 267 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 88
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
RSF YVSD+V+GL++LMEGE+ GP NLGN
Sbjct: 87 RSFCYVSDMVDGLIRLMEGENTGPINLGN 1
Score = 181 bits (389), Expect = 1e-044
Identities = 96/153 (62%), Positives = 104/153 (67%)
Frame = +2 / +2
Query: 584 PRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMR 763
PRL GP SPSIS IRPST SET KL V P TV S LSA A KLLTTRPSSM MR
Sbjct: 5 PRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMR 184
Query: 764 GPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*T 943
GP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*T
Sbjct: 185 GP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*T 364
Query: 944 SLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
S V V + LA A+P++F VP TLV G
Sbjct: 365 SDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 463
Score = 112 bits (240), Expect = 5e-024
Identities = 49/155 (31%), Positives = 90/155 (58%)
Frame = +1 / +1
Query: 580 VTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAH 759
+ ++ P +L FH+ +N +RN+ E GL + +++ Q +CL N++ +NT+I+N H
Sbjct: 1 IPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSECLCNEIANNTSIINVH 180
Query: 760 ARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
AR I IE++ + NL +V++ F TL+ I+ ++ ++I P+ L L +L+R+TI
Sbjct: 181 ARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTI 360
Query: 940 DLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
D G++ + L S+H+Q NH+ L R+
Sbjct: 361 DFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 465
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / -3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 199 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 32
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / -2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 200 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 21
Query: 599 G 597
G
Sbjct: 20 G 18
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 153 *QHVHHQCSCEDHKY*KF 206
>gb|BX255109.1|BX255109 BX255109 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP111A06 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 473
Score = 287 bits (621), Expect = 1e-076
Identities = 116/157 (73%), Positives = 133/157 (84%)
Frame = -3 / +3
Query: 963 LLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIAR 784
LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR LE+RIAR
Sbjct: 3 LLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIAR 182
Query: 783 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEH 604
IFNTYGPRM IDDGRVVSNF+AQALR EP+TV G QTRSF YVSD+V+GL++LMEG++
Sbjct: 183 IFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRLMEGDN 362
Query: 603 VGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNT 493
GP NLGNPGEFTMLELA+ V++ I+ + +E +NT
Sbjct: 363 TGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENT 473
Score = 182 bits (393), Expect = 4e-045
Identities = 96/146 (65%), Positives = 103/146 (70%)
Frame = +2 / -2
Query: 527 SMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSF 706
S+ S+T ASSS+VNSPG PRL GP SPSIS I+PST SET KL VC P TV GS
Sbjct: 439 SISSFTASASSSIVNSPGFPRLIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSP 260
Query: 707 LSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMG 886
L A*A KLLTTRPSSM +RGP VL IRAI S W*S + VSA R PSS*QLLTP+G
Sbjct: 259 LRA*AIKLLTTRPSSMFIRGP*VLNIRAIRISNPCCLW*SNIRVSATRFPSS*QLLTPIG 80
Query: 887 LTLPQ*VSTCGCWRGSP*TSLVLVRR 964
LTLPQ S GC RGSP TS V V R
Sbjct: 79 LTLPQYSSF*GCSRGSPYTSDVDVSR 2
Score = 71.2 bits (149), Expect(2) = 9e-018
Identities = 32/88 (36%), Positives = 54/88 (61%)
Frame = +1 / -1
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C + +L + K +H +L+ +++++ P +++FH + T+N IRNI E GL S ++
Sbjct: 449 C*RFNKLLHSFSKFQHCKLSWISKIDRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSH 270
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIE 780
+ LSNK+ DNTAIVN H+ I I+
Sbjct: 269 WFTSEGLSNKIADNTAIVNVHSWPIGIK 186
Score = 43.2 bits (88), Expect(3) = 1e-014
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCSGTE 707
Y+W ++ H*RWPCCQ CSG +
Sbjct: 191 YLWATNEH*RWPCCQQFYCSGPQ 259
Score = 40.0 bits (81), Expect(2) = 9e-018
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL LI+TA T+ +DIAPV LR+ +RITI
Sbjct: 119 TLPLIITASYTNWVDIAPVFFLLRMFQRITI 27
Score = 39.6 bits (80), Expect(2) = 4e-007
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3 / -3
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH NS H+ *HCPS P EDHH
Sbjct: 120 HASPHHNSFLHQLG*HCPSILPFEDVPEDHH 28
Score = 39.1 bits (79), Expect(3) = 1e-014
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -2 / +2
Query: 946 *GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
* +W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 20 *SIW*SSGTSSKGRILGQCQPNWCKKLL**GEA 118
Score = 35.4 bits (71), Expect(3) = 1e-014
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
E KP S MFLIWL V* *WK + G S S C
Sbjct: 289 EHKPEASAMFLIWLMV*FG*WKEIILGLSILEIQESLQC 405
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -3
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 252 PEQ*NC*QHGHRQCSFVAHRY* 187
Score = 32.2 bits (64), Expect(3) = 8e-005
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -2 / +2
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A Q RV++A C C G
Sbjct: 296 NPKLLLCF*YG*WFNSANGRR*YWAYQSWKSRRVYNAGTC*SCEG 430
Score = 27.2 bits (53), Expect(3) = 8e-005
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / +1
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASV 846
MVIL + + + TGAMS V AV MR SV
Sbjct: 28 MVILWNILKRKNTGAMSTQLV*EAVMMRGSV 120
Score = 24.0 bits (46), Expect(3) = 8e-005
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 214 LTMAVLSAILLLR 252
>gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G11_A029 5', mRNA sequence
Length = 667
Score = 286 bits (620), Expect = 2e-076
Identities = 114/136 (83%), Positives = 128/136 (94%)
Frame = -3 / +2
Query: 774 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGP 595
TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV+GL++LME HVGP
Sbjct: 2 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGP 181
Query: 594 FNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
FNLGNPGEFTMLELA+VV++TID +ARIEF++NT DDPHKRKPDI++AK+ L WEP+I L
Sbjct: 182 FNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISL 361
Query: 414 REGLPLMVSDFRKRIF 367
REGLPLMV DFRKR+F
Sbjct: 362 REGLPLMVEDFRKRVF 409
Score = 194 bits (418), Expect = 1e-048
Identities = 94/136 (69%), Positives = 104/136 (76%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 408 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 229
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATK 727
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TVKGS SA*ATK
Sbjct: 228 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 49
Query: 728 LLTTRPSSMHMRGPYV 775
LLTTRPSSMH+ GPYV
Sbjct: 48 LLTTRPSSMHILGPYV 1
Score = 110 bits (234), Expect = 3e-023
Identities = 44/88 (50%), Positives = 63/88 (71%)
Frame = +1 / -1
Query: 511 DPCVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITIN 690
+PC + NL KL H EL+R+ ++E +M+ FHQ +Q++NQIRNIL+ P L ++TIN
Sbjct: 265 NPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVTIN 86
Query: 691 RQGLLPQCLSNKVTDNTAIVNAHARAIC 774
Q QCLSNKV +NTAI++AH+ +IC
Sbjct: 85 CQRFFAQCLSNKVANNTAIIDAHSGSIC 2
Score = 99.6 bits (211), Expect = 5e-020
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = -2 / +1
Query: 775 YIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGA 596
+IW +VH WPCC LCCSGT + D LW* N E +CF* G* +D DG++ C
Sbjct: 1 HIWTQNVHR*WPCC*QLCCSGTAQRTFDSLW*R*TNTELSVCF*FG*WTDSTDGKQPCWT 180
Query: 595 IQPG*PWRVHHA*ACQGCPGHHR 527
Q WRVH AC GC ++R
Sbjct: 181 FQSWQSWRVHDVRACSGCERNNR 249
Score = 79.4 bits (167), Expect = 6e-014
Identities = 38/77 (49%), Positives = 44/77 (57%)
Frame = +3 / -3
Query: 543 QPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQ 722
QP QA *T Q * H PS S QP+QKH +S F + HHK S+ +VPEQ
Sbjct: 233 QPEQALTS*TLQDCQD*KVQHGCFPSVESVHQPNQKHTESSVFVYRHHKLSKVLCAVPEQ 54
Query: 723 QSY*QHGHRQCTCEGHM 773
QS *QHGH +CT HM
Sbjct: 53 QSC*QHGHHRCTFWVHM 3
Score = 68.4 bits (143), Expect = 1e-010
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -1 / +3
Query: 773 HMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGH 594
HM CA MAVL TLLLRH ++ *+FMV +K G +MFLIWL * *WK +M
Sbjct: 3 HMDPECASMMAVLLATLLLRHCAKNL*QFMVTVNKHGAFSMFLIWLMD*FD*WKTTMLDL 182
Query: 593 STWVTLASSPC 561
S L SS C
Sbjct: 183 SILAILESSRC 215
>gb|CO200454.1|CO200454 GEO2_7_C04.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_C04_A032 5', mRNA sequence
Length = 836
Score = 284 bits (615), Expect = 9e-076
Identities = 117/147 (79%), Positives = 127/147 (86%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 394 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 573
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 574 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 753
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNL 586
RSF YVSD+V+GL++LMEGE+ GP NL
Sbjct: 754 RSFCYVSDMVDGLIRLMEGENTGPINL 834
Score = 181 bits (389), Expect = 1e-044
Identities = 96/153 (62%), Positives = 104/153 (67%)
Frame = +2 / -1
Query: 584 PRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMR 763
PRL GP SPSIS IRPST SET KL V P TV S LSA A KLLTTRPSSM MR
Sbjct: 836 PRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMR 657
Query: 764 GPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*T 943
GP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*T
Sbjct: 656 GP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*T 477
Query: 944 SLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
S V V + LA A+P++F VP TLV G
Sbjct: 476 SDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 378
Score = 111 bits (238), Expect = 9e-024
Identities = 49/153 (32%), Positives = 89/153 (58%)
Frame = +1 / -3
Query: 586 QVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHAR 765
++ P +L FH+ +N +RN+ E GL + +++ Q +CL N++ +NT+I+N HAR
Sbjct: 834 KINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSECLCNEIANNTSIINVHAR 655
Query: 766 AICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDL 945
I IE++ + NL +V++ F TL+ I+ ++ ++I P+ L L +L+R+TID
Sbjct: 654 TISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTIDF 475
Query: 946 TGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
G++ + L S+H+Q NH+ L R+
Sbjct: 474 RC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 376
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 642 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 809
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 641 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 820
Query: 599 G 597
G
Sbjct: 821 G 823
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 688 *QHVHHQCSCEDHKY*KF 635
>gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_19_H03_A029 5', mRNA sequence
Length = 789
Score = 213 bits (459), Expect(2) = 3e-072
Identities = 88/117 (75%), Positives = 99/117 (84%)
Frame = -3 / +1
Query: 873 RSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPL 694
RSCYDEGKR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E L
Sbjct: 7 RSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEEL 186
Query: 693 TVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDP 523
TV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P
Sbjct: 187 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEP 357
Score = 145 bits (312), Expect(2) = 9e-045
Identities = 78/128 (60%), Positives = 86/128 (67%)
Frame = +2 / -2
Query: 491 WVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLV 670
W + + GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V
Sbjct: 389 WSIFSHLQLSRGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV 210
Query: 671 CFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVR 850
P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R
Sbjct: 209 *VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATR 30
Query: 851 LPSS*QLL 874
PSS*QLL
Sbjct: 29 FPSS*QLL 6
Score = 82.2 bits (173), Expect = 9e-015
Identities = 34/110 (30%), Positives = 65/110 (59%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 345 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 166
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIV 864
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+
Sbjct: 165 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFII 16
Score = 80.8 bits (170), Expect(2) = 3e-072
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -3 / +3
Query: 522 NARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 357 SAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 509
Score = 56.1 bits (116), Expect(2) = 9e-045
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSRR GSHPR A +MSG + GSS VF
Sbjct: 505 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 380
Score = 46.4 bits (95), Expect(2) = 3e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 102 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 269
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 101 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 280
Query: 599 G 597
G
Sbjct: 281 G 283
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 148 *QHVHHQCSCEDHKY*KF 95
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 443 MGTQGLST*RPTPYG*RFPPA 505
>gb|CO169507.1|CO169507 NDL1_7_B11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B11_A029 5', mRNA sequence
Length = 801
Score = 269 bits (581), Expect = 5e-071
Identities = 110/137 (80%), Positives = 120/137 (87%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 389 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 568
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+TV G QT
Sbjct: 569 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQT 748
Query: 666 RSFQYVSDLVEGLMKLM 616
RSF YVSD+V+GL++LM
Sbjct: 749 RSFCYVSDMVDGLIRLM 799
Score = 165 bits (354), Expect = 9e-040
Identities = 89/137 (64%), Positives = 95/137 (69%)
Frame = +2 / -1
Query: 614 SISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAI 793
SIS I+PST SET KL VC P TV GS L A*A KLLTTRPSSM +RGP VL IRAI
Sbjct: 801 SISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLLTTRPSSMFIRGP*VLNIRAI 622
Query: 794 LTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
S W*S + VSA R PSS*QLLTP+GLTLPQ S GC RGSP TS V V R LA
Sbjct: 621 RISNPCCLW*SNIRVSATRFPSS*QLLTPIGLTLPQYSSF*GCSRGSPYTSDVDVSRILA 442
Query: 974 LILFANPSMFRVPTTLV 1024
L A+P+MF VP TLV
Sbjct: 441 PTLLASPNMFNVPITLV 391
Score = 51.9 bits (107), Expect(2) = 4e-012
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +1 / -3
Query: 631 TLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIE 780
T+N IRNI E GL S ++ + LSNK+ DNTAIVN H+ I I+
Sbjct: 784 TINHIRNIAEASGLCSWGLDSHWFTSKGLSNKIADNTAIVNVHSWPIGIK 635
Score = 45.1 bits (92), Expect(3) = 5e-015
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
+DQC EH R E + + * +W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 388 KDQCYRYIEHVRTC*ESWSKDSTNINI*SIW*SSGTSSKGRILGQCQPNWCKKLL**GEA 567
Score = 42.8 bits (87), Expect(3) = 5e-015
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +1
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 640 YLWATNEH*RWPCCQQFYCSG 702
Score = 40.0 bits (81), Expect(2) = 4e-012
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1 / -3
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL LI+TA T+ +DIAPV LR+ +RITI
Sbjct: 568 TLPLIITASYTNWVDIAPVFFLLRMFQRITI 476
Score = 39.6 bits (80), Expect(2) = 4e-007
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3 / -2
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH NS H+ *HCPS P EDHH
Sbjct: 569 HASPHHNSFLHQLG*HCPSILPFEDVPEDHH 477
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -2
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 701 PEQ*NC*QHGHRQCSFVAHRY* 636
Score = 31.3 bits (62), Expect(3) = 5e-015
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 677 ESKPGVSNMFLIWLRV**S*W 615
E KP S MFLIWL V* *W
Sbjct: 738 EHKPEASAMFLIWLMV*FG*W 800
Score = 27.2 bits (53), Expect(2) = 2.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASV 846
MVIL + + + TGAMS V AV MR SV
Sbjct: 477 MVILWNILKRKNTGAMSTQLV*EAVMMRGSV 569
Score = 24.0 bits (46), Expect(2) = 2.8
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 663 LTMAVLSAILLLR 701
>gb|BG040600.1|BG040600 NXSI_113_A01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_113_A01 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 464
Score = 267 bits (577), Expect = 2e-070
Identities = 110/144 (76%), Positives = 119/144 (82%)
Frame = -3 / +3
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 811
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR
Sbjct: 3 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 182
Query: 810 ANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEG 631
LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V+G
Sbjct: 183 HGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDG 362
Query: 630 LMKLMEGEHVGPFNLGNPGEFTML 559
L+ G + GP NLGNPGEFTM+
Sbjct: 363 LIXXXXGXNTGPINLGNPGEFTMV 434
Score = 168 bits (361), Expect = 1e-040
Identities = 88/138 (63%), Positives = 95/138 (68%)
Frame = +2 / -2
Query: 560 SMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTT 739
++VNSPG PRL GP P IRPST SET KL V P TV S LSA A KLLTT
Sbjct: 433 TIVNSPGFPRLIGPVFXPXXXXIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLLTT 254
Query: 740 RPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCG 919
RPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CG
Sbjct: 253 RPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCG 74
Query: 920 CWRGSP*TSLVLVRRNLA 973
C RGSP*TS V V + LA
Sbjct: 73 CSRGSP*TSDVEVNKILA 20
Score = 92.3 bits (195), Expect = 8e-018
Identities = 41/134 (30%), Positives = 77/134 (57%)
Frame = +1 / -1
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H E + + ++ P +L +N +RN+ E GL + +++ Q +CL N++ +NT
Sbjct: 431 HCEFSWIPKINRPSILXXXXXD*AINHVRNVAEAAGLSARSLHCQFFTSECLCNEIANNT 252
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRV 921
+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I P+ L L +
Sbjct: 251 SIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWM 72
Query: 922 LERITIDLTGTGEE 963
L+R+TID G++
Sbjct: 71 LKRVTIDFRC*GQQ 30
Score = 42.8 bits (87), Expect = 0.006
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG* 635
QY+W SH H* W CC C+ T+ D W ++ + + F* G*
Sbjct: 215 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG* 358
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 261 *QHVHHQCSCEDHKY*KF 208
>gb|DR079740.1|DR079740 RTFEPL1_17_F12.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_17_F12_A029 3', mRNA sequence
Length = 784
Score = 263 bits (568), Expect = 3e-069
Identities = 103/123 (83%), Positives = 118/123 (95%)
Frame = -3 / +3
Query: 726 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAK 547
FVAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+
Sbjct: 3 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQ 182
Query: 546 VVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
VV++TID NA+IEFR NT+DDPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+F
Sbjct: 183 VVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVF 362
Query: 366 GDQ 358
GD+
Sbjct: 363 GDE 371
Score = 189 bits (408), Expect = 3e-047
Identities = 87/122 (71%), Positives = 94/122 (77%)
Frame = +2 / -1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 367 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 188
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A*A
Sbjct: 187 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 8
Query: 722 TK 727
TK
Sbjct: 7 TK 2
Score = 69.8 bits (146), Expect = 5e-011
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 212 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 33
Query: 697 GLLPQCLSNK 726
LL Q LSNK
Sbjct: 32 RLLAQSLSNK 3
Score = 67.5 bits (141), Expect = 2e-010
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = -2 / +2
Query: 724 CCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQG 545
CCSG +GA D LW W+ + EFP+ F SG* G R C +IQ W +++ G
Sbjct: 5 CCSGFAQGAFDSLWRWETDTEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTG 184
Query: 544 CPGHHRPQRTDRVPQEH 494
C G +R D V +H
Sbjct: 185 CEGDNRY*CKD*VQTKH 235
Score = 48.3 bits (99), Expect = 1e-004
Identities = 26/64 (40%), Positives = 32/64 (50%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 192 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKP 13
Query: 717 EQQS 728
EQQ+
Sbjct: 12 EQQN 1
Score = 40.9 bits (83), Expect = 0.022
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -1 / +1
Query: 725 LLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
LLLR RS *+ M M ++ GVS+ F IWL+ W+A+M HS L + C
Sbjct: 4 LLLRLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGILGNLQC 168
>gb|DR069271.1|DR069271 RTDK1_6_C04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_C04_A029 3', mRNA sequence
Length = 858
Score = 261 bits (564), Expect = 1e-068
Identities = 108/134 (80%), Positives = 116/134 (86%)
Frame = -3 / -2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 404 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 225
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 224 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 45
Query: 666 RSFQYVSDLVEGLM 625
RSF YVSD+V+GL+
Sbjct: 44 RSFCYVSDMVDGLI 3
Score = 159 bits (342), Expect = 4e-038
Identities = 86/139 (61%), Positives = 94/139 (67%)
Frame = +2 / +1
Query: 626 IRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSR 805
IRPST SET KL V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+
Sbjct: 4 IRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISK 183
Query: 806 LAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILF 985
*S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 184 PCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRL 363
Query: 986 ANPSMFRVPTTLVLCYHKG 1042
A+P++F VP TLV G
Sbjct: 364 ASPNIFNVPITLVFIVFTG 420
Score = 103 bits (219), Expect = 4e-021
Identities = 45/137 (32%), Positives = 81/137 (59%)
Frame = +1 / +3
Query: 634 LNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGT 813
+N +RN+ E GL + +++ Q +CL N++ +NT+I+N HAR I IE++ + NL
Sbjct: 12 INHVRNVAEAAGLSARSLHCQFFTSECLCNEIANNTSIINVHARTISIENSSNANL*TML 191
Query: 814 TVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*S 993
+V++ F TL+ I+ ++ ++I P+ L L +L+R+TID G++ + L S
Sbjct: 192 SVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKS 371
Query: 994 EHVQSPNHIGLVLSQRL 1044
+H+Q NH+ L R+
Sbjct: 372 QHIQCANHVSLYCLHRI 422
Score = 42.8 bits (87), Expect = 0.006
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2 / -1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG* 635
QY+W SH H* W CC C+ T+ D W ++ + + F* G*
Sbjct: 156 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG* 13
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 110 *QHVHHQCSCEDHKY*KF 163
>gb|BQ697176.1|BQ697176 NXPV_050_D09_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_050_D09 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 437
Score = 260 bits (562), Expect = 2e-068
Identities = 107/141 (75%), Positives = 117/141 (82%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 811
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 180
Query: 810 ANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEG 631
LE+RIARIFNTYGPRM IDDGRVVSNF+AQAL E LTV G QTRSF YVSD+V+G
Sbjct: 181 HGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALXXEXLTVQAPGTQTRSFCYVSDMVDG 360
Query: 630 LMKLMEGEHVGPFNLGNPGEF 568
L++LM E+ GP NLGNP +F
Sbjct: 361 LIRLMXXENTGPINLGNPXKF 423
Score = 160 bits (343), Expect = 3e-038
Identities = 86/136 (63%), Positives = 92/136 (67%)
Frame = +2 / -1
Query: 566 VNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRP 745
+N G PRL GP S IS IRPST SET KL V P TV S SA A KLLTTRP
Sbjct: 425 LNFXGFPRLIGPVFSXXISLIRPSTMSET*QKLRV*VPGACTVSXSXXSACAMKLLTTRP 246
Query: 746 SSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCW 925
SSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC
Sbjct: 245 SSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCS 66
Query: 926 RGSP*TSLVLVRRNLA 973
RGSP*TS V V + LA
Sbjct: 65 RGSP*TSDVEVNKILA 18
Score = 95.0 bits (201), Expect = 1e-018
Identities = 41/132 (31%), Positives = 78/132 (59%)
Frame = +1 / -3
Query: 568 ELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAI 747
E + + ++ P +L H+ +N +RN+ E GL + +++ Q +CL N++ +NT+I
Sbjct: 423 EFSWIPKINRPSILXXHKSD*AINHVRNVAEAAGLSARSLHCQXFXXECLCNEIANNTSI 244
Query: 748 VNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLE 927
+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I P+ L L +L+
Sbjct: 243 INVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLK 64
Query: 928 RITIDLTGTGEE 963
R+TID G++
Sbjct: 63 RVTIDFRC*GQQ 28
Score = 41.4 bits (84), Expect = 0.016
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG* 635
QY+W SH H* W CC C+ T D W ++ + + F* G*
Sbjct: 213 QYLWSSHEH**WTCC*QFHCTSTXX*XTDSASSWHSDPQLLLRF*HG* 356
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 259 *QHVHHQCSCEDHKY*KF 206
>gb|BQ654839.1|BQ654839 NXRV086_D03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV086_D03 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 694
Score = 254 bits (549), Expect = 1e-066
Identities = 102/124 (82%), Positives = 116/124 (93%)
Frame = -3 / +1
Query: 738 VVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTML 559
VVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV+GL++LME HVGPFNLGNPGEFTML
Sbjct: 1 VVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTML 180
Query: 558 ELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFR 379
ELA+VV++TID +ARIEF++NT DDPHKRKPDI++AK+ L WEP+I LREGLPLMV DFR
Sbjct: 181 ELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFR 360
Query: 378 KRIF 367
KR+F
Sbjct: 361 KRVF 372
Score = 166 bits (357), Expect = 4e-040
Identities = 83/123 (67%), Positives = 92/123 (74%)
Frame = +2 / -3
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 371 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 192
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATK 727
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TVKGS SA*ATK
Sbjct: 191 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 12
Query: 728 LLT 736
LLT
Sbjct: 11 LLT 3
Score = 90.9 bits (192), Expect = 2e-017
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +1 / -2
Query: 511 DPCVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITIN 690
+PC + NL KL H EL+R+ ++E +M+ FHQ +Q++NQIRNIL+ P L ++TIN
Sbjct: 228 NPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVTIN 49
Query: 691 RQGLLPQCLSNKVTDN 738
Q QCLSNKV +N
Sbjct: 48 CQRFFAQCLSNKVANN 1
Score = 78.5 bits (165), Expect = 1e-013
Identities = 34/81 (41%), Positives = 44/81 (54%)
Frame = -2 / +3
Query: 736 CQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA* 557
C LCCSGT + D LW* N E +CF* G* +D DG++ C Q WRVH
Sbjct: 3 C*QLCCSGTAQRTFDSLW*R*TNTELSVCF*FG*WTDSTDGKQPCWTFQSWQSWRVHDVR 182
Query: 556 ACQGCPGHHRPQRTDRVPQEH 494
AC GC ++R D + ++H
Sbjct: 183 ACSGCERNNRF*CKD*IQRKH 245
Score = 60.2 bits (125), Expect = 4e-008
Identities = 31/65 (47%), Positives = 36/65 (55%)
Frame = +3 / -1
Query: 543 QPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQ 722
QP QA *T Q * H PS S QP+QKH +S F + HHK S+ +VPEQ
Sbjct: 196 QPEQALTS*TLQDCQD*KVQHGCFPSVESVHQPNQKHTESSVFVYRHHKLSKVLCAVPEQ 17
Query: 723 QSY*Q 737
QS *Q
Sbjct: 16 QSC*Q 2
Score = 54.7 bits (113), Expect = 2e-006
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = -1 / +2
Query: 737 LSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
L TLLLRH ++ *+FMV +K G +MFLIWL * *WK +M S L SS C
Sbjct: 2 LLATLLLRHCAKNL*QFMVTVNKHGAFSMFLIWLMD*FD*WKTTMLDLSILAILESSRC 178
>gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E05_A029 3', mRNA sequence
Length = 868
Score = 253 bits (547), Expect = 2e-066
Identities = 103/150 (68%), Positives = 122/150 (81%)
Frame = -3 / +1
Query: 819 HRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDL 640
HR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+
Sbjct: 1 HRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDM 180
Query: 639 VEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDI 460
V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI
Sbjct: 181 VDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDI 360
Query: 459 SRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 361 TKAKTLLGWEPKVSLREGLPRMAEDFRLRL 450
Score = 171 bits (368), Expect = 1e-041
Identities = 89/144 (61%), Positives = 97/144 (67%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 446 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 267
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLL
Sbjct: 266 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLL 87
Query: 734 TTRPSSMHMRGPYVLKIRAILTSR 805
TTRPSSM MRGP VLKIRA+ S+
Sbjct: 86 TTRPSSMFMRGP*VLKIRAMRISK 15
Score = 76.7 bits (161), Expect = 4e-013
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 285 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 106
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNL 801
L N++ +NT+I+N HAR I IE++ + NL
Sbjct: 105 LCNEIANNTSIINVHARTISIENSSNANL 19
Score = 46.4 bits (95), Expect(2) = 3e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 42 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 209
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +2
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 41 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 220
Query: 599 G 597
G
Sbjct: 221 G 223
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 88 *QHVHHQCSCEDHKY*KF 35
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +3
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 384 MGTQGLST*RPTPYG*RFPPA 446
>gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_F03_A029 5', mRNA sequence
Length = 777
Score = 250 bits (541), Expect = 1e-065
Identities = 102/150 (68%), Positives = 122/150 (81%)
Frame = -3 / +2
Query: 819 HRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDL 640
+R LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+
Sbjct: 32 YRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDM 211
Query: 639 VEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDI 460
V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI
Sbjct: 212 VDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDI 391
Query: 459 SRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 392 TKAKTLLGWEPKVSLREGLPRMAEDFRLRL 481
Score = 171 bits (368), Expect = 1e-041
Identities = 89/144 (61%), Positives = 97/144 (67%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 477 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 298
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLL
Sbjct: 297 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLL 118
Query: 734 TTRPSSMHMRGPYVLKIRAILTSR 805
TTRPSSM MRGP VLKIRA+ S+
Sbjct: 117 TTRPSSMFMRGP*VLKIRAMRISK 46
Score = 76.7 bits (161), Expect = 4e-013
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 316 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 137
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNL 801
L N++ +NT+I+N HAR I IE++ + NL
Sbjct: 136 LCNEIANNTSIINVHARTISIENSSNANL 50
Score = 46.4 bits (95), Expect(2) = 3e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 73 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 240
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +3
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 72 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 251
Query: 599 G 597
G
Sbjct: 252 G 254
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 119 *QHVHHQCSCEDHKY*KF 66
Score = 22.1 bits (42), Expect(2) = 3e-004
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 415 MGTQGLST*RPTPYG*RFPPA 477
>gb|AW888189.1|AW888189 NXNV_105_F12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_105_F12 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 480
Score = 250 bits (540), Expect = 2e-065
Identities = 98/121 (80%), Positives = 113/121 (93%)
Frame = -3 / +2
Query: 723 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKV 544
VA LRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LM+GEHVGPFNLGNPGEFTMLELA+V
Sbjct: 2 VAXXLRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMDGEHVGPFNLGNPGEFTMLELAQV 181
Query: 543 VQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFG 364
V++TID NA+IEFR NT+DDPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV FR+R+FG
Sbjct: 182 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVXXFRRRVFG 361
Query: 363 D 361
D
Sbjct: 362 D 364
Score = 183 bits (395), Expect = 2e-045
Identities = 84/121 (69%), Positives = 91/121 (75%)
Frame = +2 / -1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RK T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 363 SPKTRRRKXSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 184
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*A 721
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS *A
Sbjct: 183 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKX*A 4
Query: 722 T 724
T
Sbjct: 3 T 1
Score = 64.8 bits (135), Expect = 1e-009
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 208 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFAIHKSHKAFNQIGNELETPCLFPISIDCQ 29
Query: 697 GLLPQCLSN 723
LL Q SN
Sbjct: 28 RLLAQXXSN 2
Score = 63.8 bits (133), Expect = 3e-009
Identities = 29/77 (37%), Positives = 39/77 (50%)
Frame = -2 / +1
Query: 724 CCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQG 545
CCS +GA D LW W+ + EFP+ F SG* G R C +IQ W +++ G
Sbjct: 1 CCSXFAQGAFDSLWRWETDTEFPVRFRSG*RPYATYGWRTCWSIQSWESWGIYNVRTSTG 180
Query: 544 CPGHHRPQRTDRVPQEH 494
C G +R D V +H
Sbjct: 181 CEGDNRY*CKD*VQTKH 231
Score = 41.4 bits (84), Expect = 0.016
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = +3 / -2
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
P QP * Q *M H R P + QPD+K GNS H H+ S+AP +
Sbjct: 188 PSQPVLVLTL*IPQDSQD*MDQHVRHP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKX 9
Query: 717 EQ 722
EQ
Sbjct: 8 EQ 3
Score = 35.0 bits (70), Expect = 1.4
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -1 / +3
Query: 722 LLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
LL RS *+ M M ++ GVS+ F IWL+ W A+M HS L + C
Sbjct: 3 LLXLCARSL*QSMEMGNRHGVSSSFPIWLKALCDLWMANMLVHSILGILGNLQC 164
>gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_G10_A029 5', mRNA sequence
Length = 637
Score = 250 bits (540), Expect = 2e-065
Identities = 100/145 (68%), Positives = 121/145 (83%)
Frame = -3 / -1
Query: 804 LEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM 625
LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+TV G QTRSF YVSD+V+GL+
Sbjct: 631 LEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLI 452
Query: 624 KLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKE 445
+LMEG++ GP NLGNPGEFTMLELA+ V++ I+ + +E +NT DDP KRKPDI++A
Sbjct: 451 RLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDPRKRKPDITKATT 272
Query: 444 FLGWEPKIPLREGLPLMVSDFRKRI 370
LGWEPK+ LREGLPLM DFR+R+
Sbjct: 271 LLGWEPKVTLREGLPLMAEDFRERL 197
Score = 161 bits (346), Expect = 1e-038
Identities = 85/143 (59%), Positives = 95/143 (66%)
Frame = +2 / +3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS + G PSR+ GSHPR+ +A +MSG L GSS VF S S+ S+T A
Sbjct: 201 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 380
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS L A*A KLL
Sbjct: 381 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 560
Query: 734 TTRPSSMHMRGPYVLKIRAILTS 802
TTRPSSM +RGP VL IRAI S
Sbjct: 561 TTRPSSMFIRGP*VLNIRAIRIS 629
Score = 64.3 bits (134), Expect = 2e-009
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +1 / +2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++++ P +++FH + T+N IRNI E L S ++ +
Sbjct: 362 LLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASCLCSWGLDSHWFTSKG 541
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 542 LSNKIADNTAIVNVHSWPIGIK 607
Score = 42.8 bits (87), Expect(2) = 1e-006
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 602 YLWATNEH*RWPCCQQFYCSG 540
Score = 35.4 bits (71), Expect = 1.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / +1
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 541 PEQ*NC*QHGHRQCSFVAHRY* 606
Score = 30.4 bits (60), Expect(2) = 0.36
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / -3
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A + RV++A C C G
Sbjct: 497 NTKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SCEG 363
Score = 30.4 bits (60), Expect(2) = 1e-006
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -1 / -2
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E K S MFLIWL V* *WK + G
Sbjct: 504 EHKHEASAMFLIWLMV*FG*WKEIILG 424
Score = 24.0 bits (46), Expect(2) = 0.36
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 579 LTMAVLSAILLLR 541
>gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC049 3' end, mRNA sequence
Length = 544
Score = 249 bits (538), Expect = 4e-065
Identities = 101/145 (69%), Positives = 120/145 (82%)
Frame = -3 / +2
Query: 804 LEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM 625
LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V+GL+
Sbjct: 8 LEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLI 187
Query: 624 KLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKE 445
+LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI++AK
Sbjct: 188 RLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKT 367
Query: 444 FLGWEPKIPLREGLPLMVSDFRKRI 370
LGWEPK+ LREGLP M DFR R+
Sbjct: 368 LLGWEPKVSLREGLPRMAEDFRLRL 442
Score = 171 bits (368), Expect = 1e-041
Identities = 89/144 (61%), Positives = 97/144 (67%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 438 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 259
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLL
Sbjct: 258 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLL 79
Query: 734 TTRPSSMHMRGPYVLKIRAILTSR 805
TTRPSSM MRGP VLKIRA+ S+
Sbjct: 78 TTRPSSMFMRGP*VLKIRAMRISK 7
Score = 76.7 bits (161), Expect = 4e-013
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 277 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 98
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNL 801
L N++ +NT+I+N HAR I IE++ + NL
Sbjct: 97 LCNEIANNTSIINVHARTISIENSSNANL 11
Score = 46.4 bits (95), Expect(2) = 2e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 34 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 201
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +3
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 33 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 212
Query: 599 G 597
G
Sbjct: 213 G 215
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 80 *QHVHHQCSCEDHKY*KF 27
Score = 22.1 bits (42), Expect(2) = 2e-004
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 376 MGTQGLST*RPTPYG*RFPPA 438
>gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP077G04 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 620
Score = 244 bits (527), Expect = 1e-063
Identities = 99/142 (69%), Positives = 118/142 (83%)
Frame = -3 / +2
Query: 795 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLM 616
RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V+GL++LM
Sbjct: 2 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLM 181
Query: 615 EGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLG 436
EGE+ GP NLGNPGEFTMLELA+ V++ I+P+A+++ +NT DDP RKPDI++AK LG
Sbjct: 182 EGENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTENTPDDPRMRKPDITKAKTLLG 361
Query: 435 WEPKIPLREGLPLMVSDFRKRI 370
WEPK+ LREGLP M DFR R+
Sbjct: 362 WEPKVSLREGLPRMAEDFRLRL 427
Score = 123 bits (263), Expect(2) = 5e-038
Identities = 63/92 (68%), Positives = 67/92 (72%)
Frame = +2 / -3
Query: 518 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVK 697
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV
Sbjct: 279 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 100
Query: 698 GSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAI 793
S LSA A KLLTTRPSSM MRGP VLKIRA+
Sbjct: 99 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 4
Score = 73.0 bits (153), Expect = 5e-012
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + V ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 262 LLHSFSEFQHCEFSWVPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 83
Query: 715 LSNKVTDNTAIVNAHARAICIEDT 786
L N++ +NT+I+N HAR I IE++
Sbjct: 82 LCNEIANNTSIINVHARTISIENS 11
Score = 56.1 bits (116), Expect(2) = 5e-038
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSRR GSHPR A +MSG + GSS VF
Sbjct: 423 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 298
Score = 55.6 bits (115), Expect(2) = 6e-008
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACG 599
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 19 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGRGEYW 198
Query: 598 AIQPG*PWRVHHA*ACQGCPGHHR 527
A P R+H+ C G HR
Sbjct: 199 AY*SWEPRRIHNVGTR*SCEGAHR 270
Score = 35.9 bits (72), Expect = 0.73
Identities = 25/73 (34%), Positives = 32/73 (43%)
Frame = -1 / +3
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 18 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 197
Query: 599 GHSTWVTLASSPC 561
G T +S C
Sbjct: 198 GLLILGTQENSQC 236
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 65 *QHVHHQCSCEDHKY*KF 12
Score = 22.1 bits (42), Expect(2) = 6e-008
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 361 MGTQGLST*RPTPYG*RFPPA 423
>gb|CX652868.1|CX652868 COLD1_62_B04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_B04_A029 3', mRNA sequence
Length = 793
Score = 244 bits (527), Expect = 1e-063
Identities = 101/123 (82%), Positives = 106/123 (86%)
Frame = -3 / -3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 374 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 195
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QT
Sbjct: 194 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQT 15
Query: 666 RSF 658
RSF
Sbjct: 14 RSF 6
Score = 144 bits (310), Expect = 1e-033
Identities = 78/128 (60%), Positives = 86/128 (67%)
Frame = +2 / +1
Query: 659 KLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNV 838
KL V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NV
Sbjct: 7 KLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINV 186
Query: 839 SAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTT 1018
SA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++F VP T
Sbjct: 187 SATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPIT 366
Query: 1019 LVLCYHKG 1042
LV G
Sbjct: 367 LVFIVFTG 390
Score = 92.3 bits (195), Expect = 8e-018
Identities = 42/129 (32%), Positives = 75/129 (58%)
Frame = +1 / +3
Query: 658 ETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQR 837
E GL + +++ Q +CL N++ +NT+I+N HAR I IE++ + NL +V++
Sbjct: 6 EAAGLSARSLHCQFFTSECLCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*C 185
Query: 838 FSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNH 1017
F TL+ I+ ++ ++I P+ L L +L+R+TID G++ + L S+H+Q NH
Sbjct: 186 FCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANH 365
Query: 1018 IGLVLSQRL 1044
+ L R+
Sbjct: 366 VSLYCLHRI 392
Score = 38.6 bits (78), Expect = 0.11
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2 / -2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQE 662
QY+W SH H* W CC C+ T+ D W ++ +
Sbjct: 126 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQ 10
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 80 *QHVHHQCSCEDHKY*KF 133
>gb|DR385918.1|DR385918 RTHG1_11_D11.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_11_D11_A029 5', mRNA sequence
Length = 821
Score = 209 bits (450), Expect(2) = 6e-063
Identities = 84/130 (64%), Positives = 101/130 (77%)
Frame = -3 / -2
Query: 918 PQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGR 739
PQ E YWG+VNPIG R+CYDEGKR AETLT YHR ++VR+ARIFNTYGPRM DGR
Sbjct: 820 PQNEEYWGHVNPIGPRACYDEGKRVAETLTYGYHRQDGVDVRVARIFNTYGPRMNPADGR 641
Query: 738 VVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTML 559
VVSNF+ QALR E +TVYGDG QTRSFQYV DL++GL+ LM P N+GN EFT+
Sbjct: 640 VVSNFIMQALRGEDMTVYGDGSQTRSFQYVHDLIDGLIALMNSNETRPVNIGNGDEFTIG 461
Query: 558 ELAKVVQDTI 529
+ AK+V++T+
Sbjct: 460 DFAKLVRETV 431
Score = 119 bits (255), Expect(2) = 1e-031
Identities = 66/123 (53%), Positives = 73/123 (59%)
Frame = +2 / +3
Query: 533 VSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLS 712
VS T LA S +VNS LP G IS + PS +S TYW V PSP*TV S S
Sbjct: 435 VSLTNLAKSPIVNSSPLPMFTGRVSFEFISAMSPSIKSWTYWNDRVWEPSP*TVMSSPRS 614
Query: 713 A*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLT 892
A K TTRPS+ MRGP VLKIRA TS + RW V+VSA RLPSS*Q P+G T
Sbjct: 615 ACMMKFETTRPSAGFMRGP*VLKIRATRTSTPS*RWYPYVSVSATRLPSS*QARGPIGFT 794
Query: 893 LPQ 901
PQ
Sbjct: 795 CPQ 803
Score = 94.1 bits (199), Expect = 2e-018
Identities = 46/128 (35%), Positives = 73/128 (57%)
Frame = +1 / +2
Query: 532 GVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQ 711
G+ D LGK+ + E VT V + HQ + ++Q+ ++LE PGL ++++N +
Sbjct: 434 GLPDQLGKISNREFVTVTDVHRSSFVRVHQRDEPIDQVVDVLERPGLGTVSVNGHVFSSK 613
Query: 712 CLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGID 891
L ++V DN++I HARAI ++DT DPN+ TVV + S TLA I+ +D I
Sbjct: 614 RLHDEV*DNSSICRVHARAISVKDTRDPNINSILTVVSVRECLSNTLAFIIAGSWSDRIH 793
Query: 892 IAPVSLHL 915
+ P+ L L
Sbjct: 794 MPPILLVL 817
Score = 53.8 bits (111), Expect(2) = 6e-063
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = -3 / -2
Query: 489 DDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
DDP KR+PD +RAKE LGW+PK + GL MV ++ ++
Sbjct: 358 DDPQKRRPDTTRAKEVLGWQPKWSVEMGLEEMVRYYKAKL 239
Score = 38.2 bits (77), Expect(2) = 1e-031
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2 / +3
Query: 392 TMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSS 490
T+ RP FG HPR SLAR++SG GSS
Sbjct: 261 TISSRPISTDHFGCHPRTSLARVVSGRLFWGSS 359
Score = 37.3 bits (75), Expect = 0.28
Identities = 32/85 (37%), Positives = 36/85 (42%)
Frame = -1 / -3
Query: 908 RLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALACALTMAVLSV 729
R G M I S M+ASV L+ TTV L GS VS MA A L M LS
Sbjct: 810 RSIGGM*IRSDHEPAMMKASVLLRHSRTDTTVKMELMFGSRVSLTLMARA*TLQMDELSQ 631
Query: 728 TLLLRH*GRSP*RFMVMESKPGVSN 654
T + * F +PG SN
Sbjct: 630 TSSCKRFEEKT*PFTETVPRPGRSN 556
Score = 33.6 bits (67), Expect = 3.6
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3 / +1
Query: 744 HRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPS 902
H Q +C GH *RY R Q GG Q +AC H + R D H P+
Sbjct: 646 HLQGSCAGHKC*RYARPEHQLHLDGGIRT*VSQQHACLHHSRLVVRSDSHAPN 804
Score = 29.5 bits (58), Expect(2) = 0.26
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2 / -1
Query: 790 RTYLQYIWPSHVH*RWPCC 734
R YL ++WP+H RW C
Sbjct: 692 RAYL*HLWPAHEPCRWTSC 636
Score = 25.4 bits (49), Expect(2) = 0.26
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2 / -1
Query: 919 PAGGDLLGQCQSHRCQELLR*GQAYS*NVDHGLPP 815
P +LG C+S R LL * QA *+ +PP
Sbjct: 821 PPKRGVLGACESDRTTSLL**RQACC*DTHVRIPP 717
>gb|DR079802.1|DR079802 RTFEPL1_17_F12.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_17_F12_A029 5', mRNA sequence
Length = 695
Score = 241 bits (521), Expect = 9e-063
Identities = 96/103 (93%), Positives = 100/103 (97%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 387 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 566
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVA 718
TAETLTMDYHRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVA
Sbjct: 567 TAETLTMDYHRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVA 695
Score = 161 bits (347), Expect = 9e-039
Identities = 79/108 (73%), Positives = 84/108 (77%)
Frame = +2 / -2
Query: 719 ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLP 898
ATKLLTTRPSS H+RGPYVLKIRAI TS AP *S+V VSAV LPSS*QL TPMGLTLP
Sbjct: 694 ATKLLTTRPSSRHIRGPYVLKIRAIRTSTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLP 515
Query: 899 Q*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
Q* S GC RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 514 Q*ASV*GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 371
Score = 119 bits (254), Expect = 6e-026
Identities = 48/101 (47%), Positives = 72/101 (71%)
Frame = +1 / -1
Query: 718 SNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIA 897
SNK+T N I+ AH+R +CIE++ +PNL + + V+IH Q F C+L LI+ D+DGI+IA
Sbjct: 695 SNKITYNPTIIKAHSRTVCIENSSNPNLNICSPVIIHSQSFGCSLTLIIATADSDGINIA 516
Query: 898 PVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
PVS LR+ +RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 515 PVSFSLRMFKRISINFTGTCKQKACPNTLGKSEHVQGSHNI 393
Score = 84.0 bits (177), Expect = 2e-015
Identities = 41/100 (41%), Positives = 54/100 (54%)
Frame = +3 / -3
Query: 720 QQSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCP 899
QQ+Y Q H Q T MY*++ +S PQ NP S F+L++ PH ++ RWD*HCP
Sbjct: 693 QQNYLQPDHHQGTFADRMY*KFEQSEPQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCP 514
Query: 900 SKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSESQPH 1019
SK ED H+ HWY * + + +RACS H
Sbjct: 513 SKLQFEDVQEDLHKLHWYL*AKSVPQHAWQVRACSRFPQH 394
Score = 73.5 bits (154), Expect = 4e-012
Identities = 43/103 (41%), Positives = 57/103 (55%)
Frame = -2 / +2
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 386 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 565
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LCC 719
S N D+GL + *G D + QYI ++V * W C+* CC
Sbjct: 566 NSRNSDYGLSQGSKC*GSDCSNFQYIRSANVP**WSGCK*FCC 694
Score = 56.1 bits (116), Expect = 6e-007
Identities = 34/73 (46%), Positives = 37/73 (50%)
Frame = -1 / +1
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T LR G SIH
Sbjct: 475 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLRFGLLEFSIHTVRE 654
Query: 758 CALTMAVLSVTLL 720
CAL M L V LL
Sbjct: 655 CALMMVGL*VILL 693
>gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_053_G03 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 460
Score = 237 bits (512), Expect = 1e-061
Identities = 97/150 (64%), Positives = 116/150 (77%)
Frame = -3 / +3
Query: 825 DYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVS 646
DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+TV G QTRSF YVS
Sbjct: 9 DYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVS 188
Query: 645 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKP 466
D+V+GL++LMEG++ GP NLGNPGEFTMLELA+ V++ I+ + +E +NT DDP K KP
Sbjct: 189 DMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDPRKXKP 368
Query: 465 DISRAKEFLGWEPKIPLREGLPLMVSDFRK 376
DI++A LGWEP LR LPLM R+
Sbjct: 369 DITKATTLLGWEPXXTLRXXLPLMAEXXRE 458
Score = 154 bits (331), Expect = 1e-036
Identities = 84/153 (54%), Positives = 95/153 (62%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R R + G R+ GSHPR+ +A +MSG L GSS VF S S+ S+T A
Sbjct: 460 RSRXXSAISGXXXRKVXXGSHPRSVVAFVMSGXXLRGSSGVFSTISTVVDVSISSFTASA 281
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS L A*A KLL
Sbjct: 280 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 101
Query: 734 TTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMV 832
TTRPSSM +RGP VL IRAI S W*S +
Sbjct: 100 TTRPSSMFIRGP*VLNIRAIRISNPCCLW*SNI 2
Score = 68.4 bits (143), Expect = 1e-010
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++++ P +++FH + T+N IRNI E GL S ++ +
Sbjct: 299 LLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSHWFTSKG 120
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 119 LSNKIADNTAIVNVHSWPIGIK 54
Score = 42.8 bits (87), Expect(2) = 9e-008
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 59 YLWATNEH*RWPCCQQFYCSG 121
Score = 35.4 bits (71), Expect = 1.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -2
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 120 PEQ*NC*QHGHRQCSFVAHRY* 55
Score = 34.5 bits (69), Expect(2) = 9e-008
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 157 EHKPEASAMFLIWLMV*FG*WKEIILG 237
Score = 30.4 bits (60), Expect(2) = 0.36
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / +2
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A + RV++A C C G
Sbjct: 164 NPKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SCEG 298
Score = 24.0 bits (46), Expect(2) = 0.36
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 82 LTMAVLSAILLLR 120
>gb|BE209115.1|BE209115 NXNV_164_A09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_164_A09 5' similar to Arabidopsis thaliana sequence
At3g46440 dTDP-glucose 4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 597
Score = 230 bits (496), Expect = 2e-059
Identities = 96/128 (75%), Positives = 101/128 (78%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 212 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 391
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 667
AETL DYHR +RIARIFNTYGPRM IDDGR SNF+AQAL LTV G
Sbjct: 392 VAETLMFDYHRQHGXXIRIARIFNTYGPRMXIDDGRXXSNFIAQALXXXXLTVQAPGTXX 571
Query: 666 RSFQYVSD 643
SF YVSD
Sbjct: 572 XSFCYVSD 595
Score = 140 bits (301), Expect = 2e-032
Identities = 77/133 (57%), Positives = 84/133 (63%)
Frame = +2 / -1
Query: 644 SETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW* 823
SET KL P TV S LSA A KLL RPSSM MRGP VLKIRA+ *
Sbjct: 594 SET*QKLXXXVPGACTVSXSXLSACAMKLLXXRPSSMXMRGP*VLKIRAMRIXXPCCL** 415
Query: 824 SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMF 1003
S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++F
Sbjct: 414 SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIF 235
Query: 1004 RVPTTLVLCYHKG 1042
VP TLV G
Sbjct: 234 NVPITLVFIVFTG 196
Score = 88.6 bits (187), Expect = 1e-016
Identities = 40/134 (29%), Positives = 74/134 (55%)
Frame = +1 / -3
Query: 643 IRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVV 822
+RN+ E + +++ Q +CL N++ T+I+N HAR I IE++ + N +V+
Sbjct: 595 VRNVAEAAXXSARSLHCQXXXXECLCNEIAXXTSIINVHARTISIENSSNANXXXMLSVI 416
Query: 823 IHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHV 1002
+ F TL+ I+ ++ ++I P+ L L +L+R+TID G++ + L S+H+
Sbjct: 415 VKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHI 236
Query: 1003 QSPNHIGLVLSQRL 1044
Q NH+ L R+
Sbjct: 235 QCANHVSLYCLHRI 194
>gb|DR023386.1|DR023386 STRS1_57_F01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_57_F01_A034 3', mRNA sequence
Length = 812
Score = 228 bits (493), Expect = 6e-059
Identities = 88/108 (81%), Positives = 103/108 (95%)
Frame = -3 / +2
Query: 681 DGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFR 502
DGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR
Sbjct: 2 DGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFR 181
Query: 501 KNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
NT+DDPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 182 PNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 325
Score = 167 bits (359), Expect = 2e-040
Identities = 75/107 (70%), Positives = 82/107 (76%)
Frame = +2 / -3
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 321 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 142
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPS 682
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPS
Sbjct: 141 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPS 1
Score = 53.3 bits (110), Expect = 4e-006
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +1 / -2
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSI 681
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I
Sbjct: 166 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPI 2
Score = 42.8 bits (87), Expect = 0.006
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = -2 / +1
Query: 679 WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQ 500
W+ + EFP+ F SG* G R C +IQ W +++ GC G +R D V
Sbjct: 4 WETDTEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGDNRY*CKD*VQT 183
Query: 499 EH 494
+H
Sbjct: 184 KH 189
Score = 32.2 bits (64), Expect = 9.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1 / +3
Query: 680 MESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
M ++ GVS+ F IWL+ W+A+M HS L + C
Sbjct: 3 MGNRHGVSSSFPIWLKALCDLWRANMLVHSILGILGNLQC 122
>gb|BG275186.1|BG275186 NXSI_140_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_140_H02 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 428
Score = 227 bits (490), Expect = 2e-058
Identities = 95/140 (67%), Positives = 109/140 (77%)
Frame = -3 / +3
Query: 876 VRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEP 697
VRSCYDEGKR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E
Sbjct: 3 VRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEE 182
Query: 696 LTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNA 517
LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTM LA+ V I+P+A
Sbjct: 183 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMXXLAEAVXXLIEPSA 362
Query: 516 RIEFRKNTQDDPHKRKPDIS 457
++ +NT DDP DI+
Sbjct: 363 ELKMTENTPDDPRMXXXDIT 422
Score = 148 bits (318), Expect = 9e-035
Identities = 83/140 (59%), Positives = 90/140 (64%)
Frame = +2 / -2
Query: 458 LMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPS 637
+MS + GSS VF A GSM +T A +VNSPG PRL GP SPSIS IRPS
Sbjct: 421 VMSXXXIRGSSGVFSVIFNSAEGSMSXFTASAXXXIVNSPGFPRLIGPVFSPSISLIRPS 242
Query: 638 TRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPR 817
T SET KL V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+
Sbjct: 241 TMSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL 62
Query: 818 W*SMVNVSAVRLPSS*QLLT 877
*S +NVSA R PSS*QLLT
Sbjct: 61 **SNINVSATRFPSS*QLLT 2
Score = 79.0 bits (166), Expect = 8e-014
Identities = 33/107 (30%), Positives = 62/107 (57%)
Frame = +1 / -1
Query: 544 NLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSN 723
+ + H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +CL N
Sbjct: 335 SFSEXXHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSECLCN 156
Query: 724 KVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIV 864
++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+
Sbjct: 155 EIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFII 15
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 101 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 268
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 100 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 279
Query: 599 G 597
G
Sbjct: 280 G 282
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 147 *QHVHHQCSCEDHKY*KF 94
>gb|BQ695559.1|BQ695559 NXPV_030_A03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_030_A03 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 399
Score = 226 bits (487), Expect = 4e-058
Identities = 95/132 (71%), Positives = 104/132 (78%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 811
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDE KR AETL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDE*KRVAETLMFDYHRQ 180
Query: 810 ANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEG 631
LE+RIARIFNTYGPRM IDDGRVVSNF+AQAL E LTV G TR F YVSD+V+
Sbjct: 181 HGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALXXEELTVQAPGTXTRIFCYVSDMVDX 360
Query: 630 LMKLMEGEHVGP 595
L+ + E+ GP
Sbjct: 361 LIXXIXXENTGP 396
Score = 140 bits (301), Expect = 2e-032
Identities = 78/126 (61%), Positives = 84/126 (66%)
Frame = +2 / -2
Query: 596 GPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYV 775
GP S SI IR ST SET K+ V P TV S SA A KLLTTRPSSM MRGP V
Sbjct: 395 GPVFSXSIXXIRXSTMSET*QKMRV*VPGACTVSSSXXSACAMKLLTTRPSSMFMRGP*V 216
Query: 776 LKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVL 955
LKIRA+ S+ *S +NVSA R SS*QLLTP+GLTLPQ S CGC RGSP*TS V
Sbjct: 215 LKIRAMRISKPCCL**SNINVSATRFHSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVE 36
Query: 956 VRRNLA 973
V + LA
Sbjct: 35 VNKILA 18
Score = 84.9 bits (179), Expect = 1e-015
Identities = 38/122 (31%), Positives = 71/122 (58%)
Frame = +1 / -1
Query: 598 PHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICI 777
P +L + +N +RN+ E G + +++ Q +CL N++ +NT+I+N HAR I I
Sbjct: 393 PSILXXNXXD*XINHVRNVAEDAGXSARSLHCQFFTXECLCNEIANNTSIINVHARTISI 214
Query: 778 EDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTG 957
E++ + NL +V++ F TL+ I+ ++ ++I P+ L L +L+R+TID G
Sbjct: 213 ENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*G 34
Query: 958 EE 963
++
Sbjct: 33 QQ 28
Score = 39.1 bits (79), Expect = 0.079
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG* 635
QY+W SH H* W CC C+ T D W + + F* G*
Sbjct: 213 QYLWSSHEH**WTCC*QFHCTSTXX*RTDSASSWHSXPHLLLRF*HG* 356
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 259 *QHVHHQCSCEDHKY*KF 206
>gb|AW290603.1|AW290603 NXNV044A08F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV044A08 5', mRNA sequence
Length = 370
Score = 223 bits (482), Expect = 2e-057
Identities = 94/122 (77%), Positives = 98/122 (80%)
Frame = -3 / +3
Query: 1008 TLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLT 829
TLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL
Sbjct: 3 TLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLM 182
Query: 828 MDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYV 649
DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV RS Y
Sbjct: 183 FDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPXXXXRSXCYX 362
Query: 648 SD 643
D
Sbjct: 363 XD 368
Score = 131 bits (281), Expect = 1e-029
Identities = 69/107 (64%), Positives = 77/107 (71%)
Frame = +2 / -1
Query: 689 TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*Q 868
TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*Q
Sbjct: 322 TVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*Q 143
Query: 869 LLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRV 1009
LLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++F V
Sbjct: 142 LLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNV 2
Score = 77.6 bits (163), Expect = 2e-013
Identities = 35/108 (32%), Positives = 65/108 (60%)
Frame = +1 / -3
Query: 682 TINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALI 861
+++ Q +CL N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I
Sbjct: 329 SLHCQFFTSECLCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFI 150
Query: 862 VTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQ 1005
+ ++ ++I P+ L L +L+R+TID G++ + L S+H+Q
Sbjct: 149 IATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQ 6
Score = 36.3 bits (73), Expect = 0.53
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTE 707
QY+W SH H* W CC C+ T+
Sbjct: 233 QYLWSSHEH**WTCC*QFHCTSTQ 304
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 279 *QHVHHQCSCEDHKY*KF 226
>gb|CD027267.1|CD027267 NXNV044A08 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV044A08 5' similar to Arabidopsis thaliana sequence
At2g28760 putative nucleotide-sugar dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 370
Score = 223 bits (482), Expect = 2e-057
Identities = 94/122 (77%), Positives = 98/122 (80%)
Frame = -3 / +3
Query: 1008 TLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLT 829
TLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL
Sbjct: 3 TLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLM 182
Query: 828 MDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYV 649
DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV RS Y
Sbjct: 183 FDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPXXXXRSXCYX 362
Query: 648 SD 643
D
Sbjct: 363 XD 368
Score = 131 bits (281), Expect = 1e-029
Identities = 69/107 (64%), Positives = 77/107 (71%)
Frame = +2 / -1
Query: 689 TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*Q 868
TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*Q
Sbjct: 322 TVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*Q 143
Query: 869 LLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRV 1009
LLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++F V
Sbjct: 142 LLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNV 2
Score = 77.6 bits (163), Expect = 2e-013
Identities = 35/108 (32%), Positives = 65/108 (60%)
Frame = +1 / -3
Query: 682 TINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALI 861
+++ Q +CL N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I
Sbjct: 329 SLHCQFFTSECLCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFI 150
Query: 862 VTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQ 1005
+ ++ ++I P+ L L +L+R+TID G++ + L S+H+Q
Sbjct: 149 IATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQ 6
Score = 36.3 bits (73), Expect = 0.53
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTE 707
QY+W SH H* W CC C+ T+
Sbjct: 233 QYLWSSHEH**WTCC*QFHCTSTQ 304
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 279 *QHVHHQCSCEDHKY*KF 226
>gb|AW758946.1|AW758946 NXNV_095_F06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_095_F06 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 330
Score = 222 bits (480), Expect = 4e-057
Identities = 93/108 (86%), Positives = 98/108 (90%)
Frame = -3 / +3
Query: 819 HRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDL 640
HRGAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDL
Sbjct: 3 HRGANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 182
Query: 639 VEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKN 496
VE LM+LMEGEHVGPFNLGN EFTMLELA V TID NA+IEF N
Sbjct: 183 VEXLMRLMEGEHVGPFNLGNXXEFTMLELAXXVXXTIDTNAKIEFXPN 326
Score = 173 bits (372), Expect = 3e-042
Identities = 80/106 (75%), Positives = 85/106 (80%)
Frame = +2 / -3
Query: 497 FLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCF 676
F NSI AL S+V +T ASS++VNS PRLNGPTCSPSIS IR STRSET WKL VCF
Sbjct: 325 FGLNSIFALVSIVXFTXCASSNIVNSXXFPRLNGPTCSPSISRIRXSTRSETNWKLRVCF 146
Query: 677 PSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAP 814
PSP*TVKGS A*ATKLLTTRPSS H+RGPYVLKIRAI TS AP
Sbjct: 145 PSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRTSTFAP 8
Score = 98.2 bits (208), Expect = 1e-019
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +1 / -2
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H + + ++EW +M A H+ H+ NQI N LETP L I+I+ Q LL Q LSNK+T N
Sbjct: 260 HCKFXXIPKIEWTNMFALHKSHKXFNQIGNELETPCLFPISIDCQRLLAQSLSNKITYNP 81
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTV 819
I+ AH+R +CIE++ +PNL + + V
Sbjct: 80 TIIKAHSRTVCIENSSNPNLNICSPV 3
Score = 71.6 bits (150), Expect = 1e-011
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = -2 / +2
Query: 802 *G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDE 623
*G D + QYI ++V * W C+* CCSG +GA D LW W+ + EFP+ F SG*
Sbjct: 20 *GSDCSNFQYIRSANVP**WSGCK*FCCSGFAQGAFDSLWRWETDTEFPVRFRSG*XPYA 199
Query: 622 ADGRRACGAIQ 590
G R C +IQ
Sbjct: 200 TYGGRTCWSIQ 232
Score = 65.2 bits (136), Expect = 1e-009
Identities = 32/71 (45%), Positives = 41/71 (57%)
Frame = +3 / -1
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGH 770
*M H R P + QPD+K GNS H H+ S+AP + PEQQ+Y Q H Q T
Sbjct: 231 *MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAPCAKPEQQNYLQPDHHQGTFADR 52
Query: 771 MY*RYVRS*PQ 803
MY*++ +S PQ
Sbjct: 51 MY*KFEQSEPQ 19
Score = 56.5 bits (117), Expect = 5e-007
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1 / +1
Query: 803 LRLGSHVSSIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV** 624
LR G SIH CAL M L V LLLR RS *+ M M ++ GVS+ F IWL+
Sbjct: 19 LRFGLLEFSIHTVRECALMMVGL*VILLLRLCARSL*QSMEMGNRHGVSSSFPIWLKXLC 198
Query: 623 S*WKASMWGHS 591
W+A+M HS
Sbjct: 199 DLWRANMLVHS 231
>gb|CO158722.1|CO158722 FLD1_8_G04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_G04_A029 5', mRNA sequence
Length = 704
Score = 220 bits (475), Expect = 2e-056
Identities = 89/105 (84%), Positives = 94/105 (89%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 388 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 567
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQA 712
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQA
Sbjct: 568 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQA 702
Score = 135 bits (289), Expect = 9e-031
Identities = 70/111 (63%), Positives = 78/111 (70%)
Frame = +2 / -1
Query: 710 SA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGL 889
SA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GL
Sbjct: 704 SACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGL 525
Query: 890 TLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
TLPQ S CGC RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 524 TLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 372
Score = 86.3 bits (182), Expect = 5e-016
Identities = 38/111 (34%), Positives = 66/111 (59%)
Frame = +1 / -3
Query: 712 CLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGID 891
CL N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++
Sbjct: 702 CLCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVN 523
Query: 892 IAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
I P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 522 ITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 370
Score = 35.4 bits (71), Expect = 1.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGT 710
QY+W SH H* W CC C+ T
Sbjct: 636 QYLWSSHEH**WTCC*QFHCTST 704
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 682 *QHVHHQCSCEDHKY*KF 629
>gb|CX650089.1|CX650089 COLD1_43_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_A08_A029 5', mRNA sequence
Length = 784
Score = 218 bits (471), Expect = 7e-056
Identities = 88/104 (84%), Positives = 93/104 (89%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 473 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 652
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQ 715
AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQ
Sbjct: 653 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQ 784
Score = 133 bits (285), Expect = 3e-030
Identities = 68/108 (62%), Positives = 76/108 (70%)
Frame = +2 / -2
Query: 719 ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLP 898
A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLP
Sbjct: 780 AMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLP 601
Query: 899 Q*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
Q S CGC RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 600 QYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 457
Score = 82.2 bits (173), Expect = 9e-015
Identities = 37/110 (33%), Positives = 65/110 (59%)
Frame = +1 / -1
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDI 894
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I
Sbjct: 784 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNI 605
Query: 895 APVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 604 TPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 455
Score = 33.6 bits (67), Expect = 3.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCC 734
QY+W SH H* W CC
Sbjct: 721 QYLWSSHEH**WTCC 765
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 767 *QHVHHQCSCEDHKY*KF 714
>gb|DR092087.1|DR092087 RTAL1_26_E11.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_26_E11_A029 3', mRNA sequence
Length = 598
Score = 218 bits (471), Expect = 7e-056
Identities = 84/104 (80%), Positives = 99/104 (95%)
Frame = -3 / +2
Query: 669 TRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQ 490
TRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+
Sbjct: 2 TRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTE 181
Query: 489 DDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
DDPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 182 DDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 313
Score = 155 bits (333), Expect = 7e-037
Identities = 71/103 (68%), Positives = 78/103 (75%)
Frame = +2 / -2
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 309 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 130
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLV 670
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL V
Sbjct: 129 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRV 1
Score = 51.5 bits (106), Expect = 1e-005
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1 / -1
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETP 666
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP
Sbjct: 154 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETP 5
Score = 37.3 bits (75), Expect = 0.28
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -2 / +1
Query: 664 EFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHRPQRTDRVPQEH 494
EFP+ F SG* G R C +IQ W +++ GC G +R D V +H
Sbjct: 7 EFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGDNRY*CKD*VQTKH 177
>gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_133_G06 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 423
Score = 216 bits (467), Expect = 2e-055
Identities = 89/138 (64%), Positives = 106/138 (76%)
Frame = -3 / +3
Query: 825 DYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVS 646
DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+TV G QTRSF YVS
Sbjct: 9 DYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVS 188
Query: 645 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKP 466
D+V+GL++LMEG++ GP NLGNPGEFTMLELA+ V++ I+ + +E +NT D K KP
Sbjct: 189 DMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDXXRKXKP 368
Query: 465 DISRAKEFLGWEPKIPLR 412
DI+ LGWEP LR
Sbjct: 369 DITXXTTLLGWEPXXTLR 422
Score = 145 bits (312), Expect = 6e-034
Identities = 79/140 (56%), Positives = 89/140 (63%)
Frame = +2 / -3
Query: 413 RRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRL 592
R+ GSHPR+ + +MSG L SS VF S S+ S+T ASSS+VNSPG PR
Sbjct: 421 RKVXXGSHPRSVVXXVMSGXXLRXSSGVFSTISTVVDVSISSFTASASSSIVNSPGFPRF 242
Query: 593 NGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPY 772
GP SPSIS I+PST SET KL VC P TV GS L A*A KLLTTRPSSM +RGP
Sbjct: 241 IGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLLTTRPSSMFIRGP* 62
Query: 773 VLKIRAILTSRLAPRW*SMV 832
VL IRAI S W*S +
Sbjct: 61 VLNIRAIRISNPCCLW*SNI 2
Score = 68.4 bits (143), Expect = 1e-010
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++++ P +++FH + T+N IRNI E GL S ++ +
Sbjct: 299 LLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSHWFTSKG 120
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 119 LSNKIADNTAIVNVHSWPIGIK 54
Score = 42.8 bits (87), Expect(2) = 9e-008
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 59 YLWATNEH*RWPCCQQFYCSG 121
Score = 35.4 bits (71), Expect = 1.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 120 PEQ*NC*QHGHRQCSFVAHRY* 55
Score = 34.5 bits (69), Expect(2) = 9e-008
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 157 EHKPEASAMFLIWLMV*FG*WKEIILG 237
Score = 30.4 bits (60), Expect(2) = 0.36
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2 / +2
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPG 536
N + +CF* G* + A+GRR A + RV++A C C G
Sbjct: 164 NPKLLLCF*YG*WFNSANGRR*YWAYKSWKSRRVYNAGTC*SCEG 298
Score = 24.0 bits (46), Expect(2) = 0.36
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 82 LTMAVLSAILLLR 120
>gb|BG275851.1|BG275851 NXSI_148_F04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_148_F04 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 404
Score = 215 bits (463), Expect = 9e-055
Identities = 90/130 (69%), Positives = 102/130 (78%)
Frame = -3 / +3
Query: 876 VRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEP 697
VRSCYDEGKR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E
Sbjct: 3 VRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEE 182
Query: 696 LTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNA 517
LTV G QTRSF YVSD+V+GL++LM GE+ GP NLGNPGEFTM LA+ V I+P+A
Sbjct: 183 LTVQAPGTQTRSFCYVSDMVDGLIRLMXGENTGPINLGNPGEFTMXXLAEAVXXLIEPSA 362
Query: 516 RIEFRKNTQD 487
+ +NT D
Sbjct: 363 ELXMTENTPD 392
Score = 142 bits (305), Expect = 5e-033
Identities = 80/131 (61%), Positives = 84/131 (64%)
Frame = +2 / -2
Query: 485 SSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKL 664
SS VF A GSM T A +VNSPG PRL GP SPSIS IRPST SET KL
Sbjct: 394 SSGVFSVIXNSAEGSMSXXTASAXXXIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKL 215
Query: 665 LVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSA 844
V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVSA
Sbjct: 214 RV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSA 35
Query: 845 VRLPSS*QLLT 877
R PSS*QLLT
Sbjct: 34 TRFPSS*QLLT 2
Score = 75.8 bits (159), Expect = 7e-013
Identities = 32/101 (31%), Positives = 59/101 (58%)
Frame = +1 / -1
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H E + + ++ P +L H+ +N +RN+ E GL + +++ Q +CL N++ +NT
Sbjct: 317 HCEFSWIPKINRPSILPXHKSD*AINHVRNVAEAAGLSARSLHCQFFTSECLCNEIANNT 138
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIV 864
+I+N HAR I IE++ + NL +V++ F TL+ I+
Sbjct: 137 SIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFII 15
Score = 44.1 bits (90), Expect = 0.002
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADG 614
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ G
Sbjct: 101 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYG 265
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 147 *QHVHHQCSCEDHKY*KF 94
>gb|BG319377.1|BG319377 NXPV_027_B04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_027_B04 5' similar to Arabidopsis
thaliana sequence At3g62830 dTDP-glucose 4-6-dehydratase
homolog D18 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 329
Score = 215 bits (463), Expect = 9e-055
Identities = 86/102 (84%), Positives = 90/102 (88%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTST EVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTIEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKR 202
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFV 721
TAETLTMDYHRGAN+ RI IFNTYG RMC+DDGRVV V
Sbjct: 203 TAETLTMDYHRGANVXXRIXXIFNTYGXRMCLDDGRVVXXXV 328
Score = 142 bits (304), Expect = 7e-033
Identities = 70/107 (65%), Positives = 76/107 (71%)
Frame = +2 / -3
Query: 722 TKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ 901
T LTTRPSS H+R PYVLKI I AP *S+V VSAV LPSS*QL TPMGLTLPQ
Sbjct: 327 TXXLTTRPSSRHIRXPYVLKIXXIRXXTFAPL**SIVRVSAVLLPSS*QLRTPMGLTLPQ 148
Query: 902 *VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
* S GC RGSP*TS+VLV + A A+PSMF+VPTTLVL G
Sbjct: 147 *ASV*GCSRGSP*TSMVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 7
Score = 99.1 bits (210), Expect = 7e-020
Identities = 40/95 (42%), Positives = 63/95 (66%)
Frame = +1 / -2
Query: 736 NTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHL 915
N I+ AH+ +CIE++ +P + + V+IH Q F C+L LI+ D+DGI+IAPVS L
Sbjct: 313 NPTIIKAHSXTVCIENSXNPXXNICSPVIIHSQSFGCSLTLIIATADSDGINIAPVSFSL 134
Query: 916 RVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
R+ +RI+I+ GT +++ + L SEHVQ ++I
Sbjct: 133 RMFKRISINFNGTCKQKACPNTLGKSEHVQGSHNI 29
Score = 70.3 bits (147), Expect = 3e-011
Identities = 37/99 (37%), Positives = 49/99 (49%)
Frame = +3 / -1
Query: 723 QSY*QHGHRQCTCEGHMY*RYVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPS 902
Q Q H Q T MY*++ +S Q NP S F+L++ PH ++ RWD*HCPS
Sbjct: 326 QXXLQPDHHQGTFADRMY*KFXQSEXQHLLPCDNP*SEFRLFSYPHHSNCGLRWD*HCPS 147
Query: 903 KSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSESQPH 1019
K ED H+ WY * + + +RACS H
Sbjct: 146 KLQFEDVQEDLHKLQWYL*AKSVPQHAWQVRACSRFPQH 30
Score = 59.3 bits (123), Expect = 7e-008
Identities = 38/102 (37%), Positives = 51/102 (50%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++Y * LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYH*SLWRSS*TSSN*SLLGQC*SHRSPQLL**G*E 201
Query: 847 YS*NVDHGLPPWCQP*G*DRTYLQYIWPSHVH*RWPCCQ*LC 722
S N D+GL + D QYI ++V * W C+ C
Sbjct: 202 NSRNSDYGLSQGSKCXXSDXXNFQYIRSANVP**WSGCKXXC 327
Score = 51.5 bits (106), Expect = 1e-005
Identities = 30/68 (44%), Positives = 33/68 (48%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSSIHMALA 759
M IL + + +LTGAM IPS S MR Q K * WI T L G SIH
Sbjct: 111 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIITGEQMLXFGLXEFSIHTVXE 290
Query: 758 CALTMAVL 735
CAL M L
Sbjct: 291 CALMMVGL 314
>gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 3', mRNA sequence
Length = 822
Score = 214 bits (462), Expect = 1e-054
Identities = 87/130 (66%), Positives = 105/130 (80%)
Frame = -3 / +2
Query: 759 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
M IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGN
Sbjct: 2 MNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGN 181
Query: 579 PGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLP 400
PGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP
Sbjct: 182 PGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLP 361
Query: 399 LMVSDFRKRI 370
M DFR R+
Sbjct: 362 RMAEDFRLRL 391
Score = 151 bits (324), Expect = 1e-035
Identities = 79/129 (61%), Positives = 85/129 (65%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 387 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 208
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLL
Sbjct: 207 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLL 28
Query: 734 TTRPSSMHM 760
TTRPSSM M
Sbjct: 27 TTRPSSMFM 1
Score = 62.0 bits (129), Expect = 1e-008
Identities = 22/75 (29%), Positives = 45/75 (60%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 226 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 47
Query: 715 LSNKVTDNTAIVNAH 759
L N++ +NT+I+N H
Sbjct: 46 LCNEIANNTSIINVH 2
Score = 33.6 bits (67), Expect(2) = 1.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2 / +1
Query: 760 HVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
H H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 1 HEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 150
Score = 22.1 bits (42), Expect(2) = 1.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 325 MGTQGLST*RPTPYG*RFPPA 387
>gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C12_A029 3', mRNA sequence
Length = 809
Score = 214 bits (462), Expect = 1e-054
Identities = 87/130 (66%), Positives = 105/130 (80%)
Frame = -3 / +3
Query: 759 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
M IDDGRVVSNF+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGN
Sbjct: 3 MNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGN 182
Query: 579 PGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLP 400
PGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP
Sbjct: 183 PGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLP 362
Query: 399 LMVSDFRKRI 370
M DFR R+
Sbjct: 363 RMAEDFRLRL 392
Score = 151 bits (324), Expect = 1e-035
Identities = 79/129 (61%), Positives = 85/129 (65%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 388 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 209
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLL 733
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KLL
Sbjct: 208 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKLL 29
Query: 734 TTRPSSMHM 760
TTRPSSM M
Sbjct: 28 TTRPSSMFM 2
Score = 62.0 bits (129), Expect = 1e-008
Identities = 22/75 (29%), Positives = 45/75 (60%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 227 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 48
Query: 715 LSNKVTDNTAIVNAH 759
L N++ +NT+I+N H
Sbjct: 47 LCNEIANNTSIINVH 3
Score = 33.6 bits (67), Expect(2) = 1.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2 / +2
Query: 760 HVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
H H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 2 HEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 151
Score = 22.1 bits (42), Expect(2) = 1.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 436 VGTEDPPA*GPSPHGLRLPQA 374
+GT+ * P+P+G R P A
Sbjct: 326 MGTQGLST*RPTPYG*RFPPA 388
>gb|AW758792.1|AW758792 NXNV_089_G04_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_089_G04 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 306
Score = 210 bits (453), Expect = 2e-053
Identities = 83/102 (81%), Positives = 94/102 (92%)
Frame = -3 / +1
Query: 708 RKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTI 529
RKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TI
Sbjct: 1 RKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETI 180
Query: 528 DPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGL 403
D NA+IEFR NT+DDPHK KPDI++AK+ LGWEPK+ L L
Sbjct: 181 DTNAKIEFRPNTEDDPHKXKPDITKAKDLLGWEPKVSLXXXL 306
Score = 156 bits (336), Expect = 3e-037
Identities = 71/100 (71%), Positives = 77/100 (77%)
Frame = +2 / -2
Query: 404 RPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGL 583
R R GS P S A ++SG LCGSS VF NSI AL S+VS+TT ASS++VNSPG
Sbjct: 305 RXXXRDTLGSQPSRSFALVISGXXLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGF 126
Query: 584 PRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGS 703
PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS
Sbjct: 125 PRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGS 6
Score = 59.7 bits (124), Expect = 5e-008
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +1 / -1
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q
Sbjct: 192 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQ 13
Query: 697 GLL 705
LL
Sbjct: 12 RLL 4
Score = 56.1 bits (116), Expect = 6e-007
Identities = 26/71 (36%), Positives = 36/71 (50%)
Frame = -2 / +3
Query: 706 EGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHR 527
+GA D LW W+ + EFP+ F SG* G R C +IQ W +++ GC G +R
Sbjct: 3 QGAFDSLWRWETDTEFPVRFRSG*RPYATYGGRTCWSIQSWESWGIYNVRTSTGCEGDNR 182
Query: 526 PQRTDRVPQEH 494
D V +H
Sbjct: 183 Y*CKD*VQTKH 215
Score = 38.6 bits (78), Expect = 0.11
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +3 / -3
Query: 537 PGQPWQAQAW*TRQGYPG*MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAP 704
P QP * Q *M H R P + QPD+K GNS H H+ S+AP
Sbjct: 172 PSQPVLVLTL*IPQDSQD*MDQHVRPP*VA*GLQPDRKRTGNSVSVSHLHRLSKAP 5
Score = 36.3 bits (73), Expect = 0.53
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1 / +2
Query: 704 RSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHSTWVTLASSPC 561
RS *+ M M ++ GVS+ F IWL+ W+A+M HS L + C
Sbjct: 5 RSL*QSMEMGNRHGVSSSFPIWLKALCDLWRANMLVHSILGILGNLQC 148
>gb|AW784129.1|AW784129 NXNV_103_E03_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_103_E03 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 378
Score = 207 bits (447), Expect = 1e-052
Identities = 86/124 (69%), Positives = 101/124 (81%)
Frame = -3 / +3
Query: 852 KRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK 673
KR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G
Sbjct: 3 KRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGT 182
Query: 672 QTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNT 493
QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT
Sbjct: 183 QTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENT 362
Query: 492 QDDP 481
DP
Sbjct: 363 XXDP 374
Score = 134 bits (287), Expect = 2e-030
Identities = 75/123 (60%), Positives = 81/123 (65%)
Frame = +2 / -3
Query: 482 GSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWK 661
GS VF A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET K
Sbjct: 373 GSXXVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QK 194
Query: 662 LLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVS 841
L V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+ *S +NVS
Sbjct: 193 LRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVS 14
Query: 842 AVR 850
A R
Sbjct: 13 ATR 5
Score = 78.5 bits (165), Expect = 1e-013
Identities = 33/106 (31%), Positives = 62/106 (58%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 320 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 141
Query: 715 LSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTL 852
L N++ +NT+I+N HAR I IE++ + NL +V++ F TL
Sbjct: 140 LCNEIANNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTL 3
Score = 46.4 bits (95), Expect = 5e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +2
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 77 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WPNQTYGR 244
Score = 34.1 bits (68), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1 / +1
Query: 779 SIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMW 600
SI M LA L M VL L +H *+ ++ +P S FL WL * WK +
Sbjct: 76 SILMVLA*TLMMDVLLAISLHKHSEVKN*QCKLLALRPAASATFLTWLMA*SDLWKGRIL 255
Query: 599 G 597
G
Sbjct: 256 G 258
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 123 *QHVHHQCSCEDHKY*KF 70
>gb|DR072584.1|DR072584 RTDK1_27_F10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_27_F10_A029 3', mRNA sequence
Length = 586
Score = 207 bits (446), Expect = 2e-052
Identities = 79/99 (79%), Positives = 94/99 (94%)
Frame = -3 / +3
Query: 654 YVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHK 475
+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHK
Sbjct: 3 FVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHK 182
Query: 474 RKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
RKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 183 RKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 299
Score = 146 bits (313), Expect = 4e-034
Identities = 67/97 (69%), Positives = 74/97 (76%)
Frame = +2 / -1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 295 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 116
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSET 652
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET
Sbjct: 115 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSET 5
Score = 43.2 bits (88), Expect = 0.005
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1 / -3
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRN 651
C+ + +L NL H + R+ ++EW +M A H+ H+ NQI N
Sbjct: 140 CISIYCLLHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGN 6
>gb|BQ696902.1|BQ696902 NXPV_046_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_046_F10 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 339
Score = 204 bits (440), Expect = 1e-051
Identities = 85/113 (75%), Positives = 89/113 (78%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 811
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 180
Query: 810 ANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQY 652
LE+RIARIFNTYGPRM IDDGRV NF+AQAL E LTV QTR Y
Sbjct: 181 HGLEIRIARIFNTYGPRMNIDDGRVXXNFIAQALXXEELTVQAPXTQTRXXCY 339
Score = 120 bits (256), Expect = 3e-026
Identities = 63/95 (66%), Positives = 68/95 (71%)
Frame = +2 / -2
Query: 689 TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*Q 868
TV S LSA A KL TRPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*Q
Sbjct: 302 TVSSSXLSACAMKLXXTRPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*Q 123
Query: 869 LLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
LLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 122 LLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILA 18
Score = 71.6 bits (150), Expect = 1e-011
Identities = 33/99 (33%), Positives = 59/99 (59%)
Frame = +1 / -1
Query: 667 GLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSC 846
GL +++ Q +CL N++ NT+I+N HAR I IE++ + NL +V++ F
Sbjct: 324 GLSXRSLHCQFFXXECLCNEIXXNTSIINVHARTISIENSSNANL*TMLSVIVKH*CFCH 145
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEE 963
TL+ I+ ++ ++I P+ L L +L+R+TID G++
Sbjct: 144 TLSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQ 28
Score = 33.1 bits (66), Expect = 4.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3 / -3
Query: 735 QHGHRQCTCEGHMY*RY 785
QH H QC+CE H Y*++
Sbjct: 256 QHVHHQCSCEDHKY*KF 206
Score = 32.7 bits (65), Expect = 6.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTE 707
QY+W SH H* W C C+ T+
Sbjct: 213 QYLWSSHEH**WTCXXQFHCTSTQ 284
>gb|AL750350.1|AL750350 AL750350 RN Pinus pinaster cDNA clone RN01E02 similar to DTDP-GLUCOSE
4-6-DEHYDRATASE, mRNA sequence
Length = 377
Score = 202 bits (435), Expect = 6e-051
Identities = 81/96 (84%), Positives = 85/96 (88%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 89 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 268
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGR 739
AETL DYHR LE+RIARIFNTYGPRM IDDGR
Sbjct: 269 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGR 376
Score = 119 bits (255), Expect = 4e-026
Identities = 61/101 (60%), Positives = 69/101 (68%)
Frame = +2 / -3
Query: 740 RPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCG 919
RPSSM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CG
Sbjct: 375 RPSSMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCG 196
Query: 920 CWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
C RGSP*TS V V + LA A+P++F VP T V G
Sbjct: 195 CSRGSP*TSDVEVNKILAPTRLASPNIFNVPITFVFIVFTG 73
Score = 71.2 bits (149), Expect = 2e-011
Identities = 34/102 (33%), Positives = 59/102 (57%)
Frame = +1 / -2
Query: 739 TAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLR 918
T+I+N HAR I IE++ + NL +V++ F TL+ I+ A ++ ++I P+ L L
Sbjct: 376 TSIINVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIAASYSNWVNITPIFLLLW 197
Query: 919 VLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
+L+R+TID G++ + L +H+Q NH+ L R+
Sbjct: 196 MLKRVTIDFRC*GQQNSCTNSLGKPQHIQCANHVCLYCLHRI 71
Score = 30.9 bits (61), Expect(2) = 0.50
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -1
Query: 738 HGHRQCTCEGHMY*RY 785
H H QC+CE H Y*++
Sbjct: 377 HVHHQCSCEDHKY*KF 330
Score = 23.1 bits (44), Expect(2) = 0.50
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3 / -1
Query: 837 FQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHR 941
F +A H +S + *H P+ P A E HHR
Sbjct: 278 FLPHAFLHHSSFLLQLG*HYPNIPPFVDAQEGHHR 174
>gb|BX676890.1|BX676890 BX676890 RN Pinus pinaster cDNA clone RN13E08, mRNA sequence
Length = 520
Score = 139 bits (299), Expect(2) = 9e-051
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -3 / +1
Query: 894 NVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQ 715
NVNPIGVRSCYDEGKR AETL DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQ
Sbjct: 316 NVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQ 495
Query: 714 ALRKEPLT 691
ALR EP+T
Sbjct: 496 ALRGEPMT 519
Score = 89.5 bits (189), Expect(2) = 1e-024
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = +2 / -3
Query: 692 VKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QL 871
V GS L A*A KLLTTRPSSM +RGP VL IRAI S W*S + VSA R PSS*QL
Sbjct: 518 VIGSPLRA*AIKLLTTRPSSMFIRGP*VLNIRAIRISNPCCLW*SNIRVSATRFPSS*QL 339
Query: 872 LTPMGLT 892
LTP+GLT
Sbjct: 338 LTPIGLT 318
Score = 82.2 bits (173), Expect(2) = 9e-051
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQ 913
KTNV+GTLNMLGLAKR+ A+ LLTSTSEVYGDPL+HPQ
Sbjct: 182 KTNVIGTLNMLGLAKRVGAKILLTSTSEVYGDPLEHPQ 295
Score = 44.6 bits (91), Expect(2) = 1e-024
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2 / -2
Query: 917 GCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLV 1024
GC RGSP TS V V R A L A+P+MF VP TLV
Sbjct: 291 GCSRGSPYTSDVDVSRIFAPTLLASPNMFNVPITLV 184
Score = 43.2 bits (88), Expect = 0.005
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2 / +3
Query: 775 YIWPSHVH*RWPCCQ*LCCSGTE 707
Y+W ++ H*RWPCCQ CSG +
Sbjct: 435 YLWATNEH*RWPCCQQFYCSGPQ 503
Score = 35.4 bits (71), Expect(2) = 0.010
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 496 PEQ*NC*QHGHRQCSFVAHRY* 431
Score = 34.1 bits (68), Expect = 2.6
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1 / -2
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 495 LSNKIADNTAIVNVHSWPIGIK 430
Score = 24.4 bits (47), Expect(2) = 0.010
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3 / -1
Query: 846 YACPHRNSS*HRWD*HCPSKS 908
+A PH NS H+ *H P S
Sbjct: 364 HASPHHNSFLHQLG*HLPQYS 302
>gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_A08_A029 3', mRNA sequence
Length = 781
Score = 197 bits (425), Expect = 1e-049
Identities = 79/121 (65%), Positives = 97/121 (80%)
Frame = -3 / +1
Query: 732 SNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLEL 553
SNF+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLEL
Sbjct: 1 SNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLEL 180
Query: 552 AKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKR 373
A+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R
Sbjct: 181 AEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLR 360
Query: 372 I 370
+
Sbjct: 361 L 363
Score = 131 bits (281), Expect = 1e-029
Identities = 70/119 (58%), Positives = 76/119 (63%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 359 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 180
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKL 730
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KL
Sbjct: 179 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKL 3
Score = 46.4 bits (95), Expect = 5e-004
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 198 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 19
Query: 715 LSNKV 729
L N++
Sbjct: 18 LCNEI 4
>gb|BE582468.1|BE582468 NXCI_033_G07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_033_G07 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 485
Score = 195 bits (421), Expect = 5e-049
Identities = 79/102 (77%), Positives = 84/102 (82%)
Frame = -3 / +3
Query: 1014 VGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET 835
+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYD KR A T
Sbjct: 180 IGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDXXKRVAXT 359
Query: 834 LTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL 709
L DYHR +RI RIFNTYGPRM IDDGRV SNF+AQAL
Sbjct: 360 LXXDYHRXHGXXIRIXRIFNTYGPRMNIDDGRVXSNFIAQAL 485
Score = 81.7 bits (172), Expect(2) = 4e-022
Identities = 41/64 (64%), Positives = 46/64 (71%)
Frame = +2 / -2
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S NVSA R SS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++
Sbjct: 373 *SXXNVSATRFXSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNI 194
Query: 1001 FRVP 1012
F VP
Sbjct: 193 FNVP 182
Score = 73.0 bits (153), Expect = 5e-012
Identities = 33/102 (32%), Positives = 58/102 (56%)
Frame = +1 / -1
Query: 709 QCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGI 888
+CL N++ NT+I+N HAR I IE++ + N +V++ TL I+ ++ +
Sbjct: 485 ECLCNEIAXNTSIINVHARTISIENSXNANXXTMLSVIVXX*CXCHTLXXIIATSYSNRV 306
Query: 889 DIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPN 1014
+I P+ L L +L+R+TID G++ + L S+H+Q N
Sbjct: 305 NITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCAN 180
Score = 44.1 bits (90), Expect(2) = 4e-022
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +2 / -2
Query: 710 SA*ATKLLTTRPSSMHMRGPYVLKIR 787
SA A KLL TRPSSM MRGP VLKIR
Sbjct: 484 SACAMKLLXTRPSSMFMRGP*VLKIR 407
>gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_G01_A029 5', mRNA sequence
Length = 786
Score = 195 bits (421), Expect = 5e-049
Identities = 78/120 (65%), Positives = 96/120 (80%)
Frame = -3 / +2
Query: 729 NFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELA 550
NF+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA
Sbjct: 2 NFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELA 181
Query: 549 KVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 182 EAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 361
Score = 131 bits (281), Expect = 1e-029
Identities = 70/119 (58%), Positives = 76/119 (63%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 357 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 178
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKL 730
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA A KL
Sbjct: 177 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSACAMKL 1
Score = 46.4 bits (95), Expect = 5e-004
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +1 / -3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 196 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 17
Query: 715 LSNKV 729
L N++
Sbjct: 16 LCNEI 2
>gb|BX253417.1|BX253417 BX253417 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP083C06a, mRNA sequence
Length = 317
Score = 195 bits (420), Expect = 7e-049
Identities = 78/105 (74%), Positives = 89/105 (84%)
Frame = -3 / +3
Query: 930 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCI 751
PL+HPQ E YWGNVNPIGV+SCYDEGKR A+TL DYHR L++RIARIFNTYGPRM I
Sbjct: 3 PLEHPQKEKYWGNVNPIGVKSCYDEGKRVAKTLMFDYHRQHGLKIRIARIFNTYGPRMNI 182
Query: 750 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLM 616
DDGRVVSNF+AQALR EP+TV G QTRSF YVSD+ +GL++LM
Sbjct: 183 DDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMGDGLIRLM 317
Score = 121 bits (259), Expect = 1e-026
Identities = 65/105 (61%), Positives = 69/105 (65%)
Frame = +2 / -2
Query: 617 ISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAIL 796
IS I+PS SET KL VC P TV GS L A*A KLLTTRPSSM +RGP VL IRAI
Sbjct: 316 ISRIKPSPISET*QKLRVCVPGAWTVIGSPLRA*AIKLLTTRPSSMFIRGP*VLNIRAIR 137
Query: 797 TSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRG 931
W*S + V A R PSS*QL TP+GLTLPQ S GC RG
Sbjct: 136 IFNPCCLW*SNIRVFATRFPSS*QLFTPIGLTLPQYFSFWGCSRG 2
Score = 49.6 bits (102), Expect(2) = 3e-009
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +1 / -1
Query: 631 TLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIE 780
T+ IRNI E GL S ++ + LSNK+ DNTAIVN H+ I I+
Sbjct: 302 TITHIRNIAEASGLCSWGLDSHWFTSEGLSNKIADNTAIVNVHSWPIGIK 153
Score = 43.2 bits (88), Expect(3) = 7e-010
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCSGTE 707
Y+W ++ H*RWPCCQ CSG +
Sbjct: 158 YLWATNEH*RWPCCQQFYCSGPQ 226
Score = 35.4 bits (71), Expect(2) = 3e-004
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -3
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 219 PEQ*NC*QHGHRQCSFVAHRY* 154
Score = 32.7 bits (65), Expect(2) = 3e-009
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3 / -3
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGED 932
+A PH NS H+ *HCPS P ED
Sbjct: 87 HASPHHNSFLHQLG*HCPSIFPFGDVPED 1
Score = 31.8 bits (63), Expect(3) = 7e-010
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 931 SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
SS G +LGQCQ + C++LL *G+A
Sbjct: 2 SSGTSPKGKILGQCQPNWCKKLL**GEA 85
Score = 29.5 bits (58), Expect(2) = 3e-004
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / -1
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLER 930
TL LI+TA T+ +DIAPV L + +R
Sbjct: 86 TLPLIITAFYTNWVDIAPVFFLLGMFQR 3
Score = 26.3 bits (51), Expect(3) = 7e-010
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV* 627
E KP S MFLIW+ V*
Sbjct: 256 EHKPEASAMFLIWVMV* 306
>gb|BE123641.1|BE123641 NXNV_150_B11_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_150_B11 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 310
Score = 194 bits (419), Expect = 1e-048
Identities = 81/103 (78%), Positives = 85/103 (82%)
Frame = -3 / +1
Query: 996 LGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 817
LGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYD KR AETL DYH
Sbjct: 1 LGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDXXKRVAETLMFDYH 180
Query: 816 RGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV 688
R L +RIARIFNTYGPRM IDDGRVVSNF+AQAL LTV
Sbjct: 181 RQHGLXIRIARIFNTYGPRMNIDDGRVVSNFIAQALXXXXLTV 309
Score = 118 bits (253), Expect = 8e-026
Identities = 64/102 (62%), Positives = 70/102 (68%)
Frame = +2 / -3
Query: 689 TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*Q 868
TV S SA A KLLTTRPSSM MRGP VLKIRA+ + *S +NVSA R SS*Q
Sbjct: 308 TVSXSXXSACAMKLLTTRPSSMFMRGP*VLKIRAMRIXKPCCL**SNINVSATRFXSS*Q 129
Query: 869 LLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANP 994
LLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P
Sbjct: 128 LLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASP 3
Score = 67.0 bits (140), Expect = 3e-010
Identities = 29/85 (34%), Positives = 52/85 (61%)
Frame = +1 / -2
Query: 709 QCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGI 888
+CL N++ +NT+I+N HAR I IE++ + N +V++ F TL I+ ++ +
Sbjct: 288 ECLCNEIANNTSIINVHARTISIENSSNANX*TMLSVIVKH*CFCHTLXXIIATSYSNRV 109
Query: 889 DIAPVSLHLRVLERITIDLTGTGEE 963
+I P+ L L +L+R+TID G++
Sbjct: 108 NITPIFLLLWMLKRVTIDFRC*GQQ 34
Score = 35.4 bits (71), Expect = 1.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGT 710
QY+W SH H* W CC C+ T
Sbjct: 219 QYLWSSHEH**WTCC*QFHCTST 287
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 265 *QHVHHQCSCEDHKY*KF 212
>gb|BG832809.1|BG832809 NXPV_081_A01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_081_A01 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 321
Score = 194 bits (418), Expect = 1e-048
Identities = 82/107 (76%), Positives = 85/107 (79%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 811
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR AETL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 180
Query: 810 ANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ 670
LE+RIARIFNT G RM IDDGRVV NF AQA R E LTV G Q
Sbjct: 181 HGLEIRIARIFNTXGXRMNIDDGRVVXNFXAQAXRGEELTVQAXGTQ 321
Score = 117 bits (251), Expect = 1e-025
Identities = 62/95 (65%), Positives = 67/95 (70%)
Frame = +2 / -2
Query: 689 TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*Q 868
TV S L A A KL TTRPSSM MR P VLKIRA+ S+ *S +NVSA R PSS*Q
Sbjct: 302 TVSSSPLXACAXKLXTTRPSSMFMRXPXVLKIRAMRISKPCCL**SNINVSATRFPSS*Q 123
Query: 869 LLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
LLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 122 LLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILA 18
Score = 60.6 bits (126), Expect = 3e-008
Identities = 29/98 (29%), Positives = 55/98 (56%)
Frame = +1 / -1
Query: 670 LLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCT 849
L + +++ Q CL ++ NT+I+N HA IE++ + NL +V++ F T
Sbjct: 321 LSAXSLHCQFFTSXCLCXEIXXNTSIINVHAXTXXIENSSNANL*TMLSVIVKH*CFCHT 142
Query: 850 LALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEE 963
L+ I+ ++ ++I P+ L L +L+R+TID G++
Sbjct: 141 LSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQ 28
>gb|CX646143.1|CX646143 COLD1_7_C08.g1_A029 Root cold Pinus taeda cDNA clone COLD1_7_C08_A029
5', mRNA sequence
Length = 694
Score = 194 bits (418), Expect = 1e-048
Identities = 78/93 (83%), Positives = 82/93 (88%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 415 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 594
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCID 748
AETL DYHR LE+RIARIFNTYGPRM ID
Sbjct: 595 VAETLMFDYHRQHGLEIRIARIFNTYGPRMNID 693
Score = 114 bits (243), Expect = 2e-024
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = +2 / -3
Query: 749 SMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWR 928
SM MRGP VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC R
Sbjct: 692 SMFMRGP*VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSR 513
Query: 929 GSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
GSP*TS V V + LA A+P++F VP TLV G
Sbjct: 512 GSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 399
Score = 68.4 bits (143), Expect = 1e-010
Identities = 32/99 (32%), Positives = 56/99 (56%)
Frame = +1 / -2
Query: 748 VNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLE 927
+N HAR I IE++ + NL +V++ F TL+ I+ ++ ++I P+ L L +L+
Sbjct: 693 INVHARTISIENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLK 514
Query: 928 RITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 513 RVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 397
>gb|DR081398.1|DR081398 RTFEPL1_29_G11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G11_A029 3', mRNA sequence
Length = 802
Score = 192 bits (414), Expect = 5e-048
Identities = 75/97 (77%), Positives = 89/97 (91%)
Frame = -3 / +1
Query: 657 QYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPH 478
QYVSDLV+GL++LME HVGPFNLGNPGEFTMLELA+VV++TID +ARIEF++NT DDPH
Sbjct: 1 QYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPH 180
Query: 477 KRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
KRKPDI++AK+ L WEP+I LREGLPLMV DFRKR+F
Sbjct: 181 KRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 291
Score = 123 bits (264), Expect = 2e-027
Identities = 61/96 (63%), Positives = 70/96 (72%)
Frame = +2 / -3
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 290 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 111
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETY 655
ASS++VNSPGLPRL GPT SIS I PST+SETY
Sbjct: 110 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY 3
Score = 58.3 bits (121), Expect = 1e-007
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1 / -2
Query: 511 DPCVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNIL 657
+PC + NL KL H EL+R+ ++E +M+ FHQ +Q++NQIRNIL
Sbjct: 147 NPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNIL 1
Score = 49.6 bits (102), Expect = 5e-005
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -2 / +3
Query: 655 ICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHR 527
+CF* G* +D DG++ C Q WRVH AC GC ++R
Sbjct: 3 VCF*FG*WTDSTDGKQPCWTFQSWQSWRVHDVRACSGCERNNR 131
>gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 3', mRNA sequence
Length = 771
Score = 188 bits (406), Expect = 6e-047
Identities = 76/117 (64%), Positives = 93/117 (79%)
Frame = -3 / +1
Query: 720 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V
Sbjct: 1 AQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAV 180
Query: 540 QDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 181 KELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 351
Score = 127 bits (273), Expect = 1e-028
Identities = 67/114 (58%), Positives = 73/114 (64%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 347 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 168
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA 715
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA
Sbjct: 167 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 6
Score = 42.3 bits (86), Expect = 0.009
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 186 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 7
Query: 715 L 717
L
Sbjct: 6 L 4
>gb|AI813092.1|AI813092 20F12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 509
Score = 187 bits (402), Expect = 2e-046
Identities = 73/95 (76%), Positives = 87/95 (91%)
Frame = -3 / +1
Query: 651 VSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKR 472
VSDLV+GL++LME HVGPFNLGNPGEFTMLELA+VV++TID +ARIEF++NT DDPHKR
Sbjct: 1 VSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKR 180
Query: 471 KPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
KPDI++AK+ L WEP+I LREGLPLMV DFRKR+F
Sbjct: 181 KPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 285
Score = 118 bits (252), Expect = 1e-025
Identities = 59/94 (62%), Positives = 68/94 (72%)
Frame = +2 / -1
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 284 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 105
Query: 548 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSE 649
ASS++VNSPGLPRL GPT SIS I PST+SE
Sbjct: 104 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSE 3
Score = 54.7 bits (113), Expect = 2e-006
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +1 / -3
Query: 511 DPCVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRN 651
+PC + NL KL H EL+R+ ++E +M+ FHQ +Q++NQIRN
Sbjct: 141 NPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRN 1
Score = 44.1 bits (90), Expect = 0.002
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2 / +3
Query: 649 F*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGCPGHHR 527
F* G* +D DG++ C Q WRVH AC GC ++R
Sbjct: 3 F*FG*WTDSTDGKQPCWTFQSWQSWRVHDVRACSGCERNNR 125
>gb|CF479423.1|CF479423 RTWW3_22_G10.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_22_G10_A022 3', mRNA sequence
Length = 641
Score = 186 bits (401), Expect = 3e-046
Identities = 70/89 (78%), Positives = 84/89 (94%)
Frame = -3 / +2
Query: 624 KLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKE 445
+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKRKPDI++AK+
Sbjct: 2 RLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKD 181
Query: 444 FLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 182 LLGWEPKVSLRKGLPLMVEDFRRRVFGDE 268
Score = 127 bits (272), Expect = 2e-028
Identities = 58/87 (66%), Positives = 65/87 (74%)
Frame = +2 / -3
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 264 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 85
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSIS 622
TT ASS++VNSPG PRLNGPTCSPSIS
Sbjct: 84 TTCASSNIVNSPGFPRLNGPTCSPSIS 4
>gb|DR682084.1|DR682084 EST1072159 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA651, mRNA sequence
Length = 731
Score = 186 bits (401), Expect = 3e-046
Identities = 70/89 (78%), Positives = 84/89 (94%)
Frame = -3 / -3
Query: 624 KLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKE 445
+LMEGEHVGPFNLGNPGEFTMLELA+VV++TID NA+IEFR NT+DDPHKRKPDI++AK+
Sbjct: 729 RLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKD 550
Query: 444 FLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 549 LLGWEPKVSLRKGLPLMVEDFRRRVFGDE 463
Score = 127 bits (272), Expect = 2e-028
Identities = 58/87 (66%), Positives = 65/87 (74%)
Frame = +2 / +2
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NSI AL S+VS+
Sbjct: 467 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 646
Query: 542 TTLASSSMVNSPGLPRLNGPTCSPSIS 622
TT ASS++VNSPG PRLNGPTCSPSIS
Sbjct: 647 TTCASSNIVNSPGFPRLNGPTCSPSIS 727
>gb|AW758685.1|AW758685 NXNV_085_C06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_085_C06 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 375
Score = 185 bits (399), Expect = 6e-046
Identities = 79/124 (63%), Positives = 92/124 (74%)
Frame = -3 / +2
Query: 834 LTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ 655
L DYHR LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR E LTV G QTRSF
Sbjct: 2 LMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFC 181
Query: 654 YVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHK 475
YVSD+V+G ++LMEGE+ NLGNP EFTM LA+ V + I +A ++ +NT DDP
Sbjct: 182 YVSDMVDGXIRLMEGENTXXINLGNPXEFTMXXLAEAVXELIXXSAELKMTENTPDDPRM 361
Query: 474 RKPD 463
RKPD
Sbjct: 362 RKPD 373
Score = 109 bits (232), Expect = 6e-023
Identities = 64/115 (55%), Positives = 68/115 (59%)
Frame = +2 / -1
Query: 461 MSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPST 640
MSG GSS VF A M S T A ++VNS G PRL SPSIS I PST
Sbjct: 375 MSGFLXRGSSGVFSVIFNSAXXXMSSXTASAXXNIVNSXGFPRLIXXVFSPSISLIXPST 196
Query: 641 RSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSR 805
SET KL V P TV S LSA A KLLTTRPSSM MRGP VLKIRA+ S+
Sbjct: 195 MSET*QKLRV*VPGACTVSSSPLSACAMKLLTTRPSSMFMRGP*VLKIRAMRISK 31
Score = 72.5 bits (152), Expect = 7e-012
Identities = 28/88 (31%), Positives = 53/88 (60%)
Frame = +1 / -3
Query: 562 HGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCLSNKVTDNT 741
H E + + ++ +L FH+ +N +RN+ E GL + +++ Q +CL N++ +NT
Sbjct: 274 HCEFSWIPKINXXSILPFHKSDXXINHVRNVAEAAGLSARSLHCQFFTSECLCNEIANNT 95
Query: 742 AIVNAHARAICIEDTCDPNLKVGTTVVI 825
+I+N HAR I IE++ + NL +V++
Sbjct: 94 SIINVHARTISIENSSNANL*TMLSVIV 11
Score = 46.9 bits (96), Expect = 4e-004
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2 / +1
Query: 778 QYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGR 611
QY+W SH H* W CC C+ T+ D W ++ + + F* G* ++ GR
Sbjct: 58 QYLWSSHEH**WTCC*QFHCTSTQR*RTDSASSWHSDPQLLLRF*HG*WXNQTYGR 225
Score = 33.6 bits (67), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 732 *QHGHRQCTCEGHMY*RY 785
*QH H QC+CE H Y*++
Sbjct: 104 *QHVHHQCSCEDHKY*KF 51
>gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G05_A029 5', mRNA sequence
Length = 686
Score = 185 bits (398), Expect = 8e-046
Identities = 75/117 (64%), Positives = 92/117 (78%)
Frame = -3 / -1
Query: 720 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V
Sbjct: 686 AQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAV 507
Query: 540 QDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
++ I+P+A ++ +NT DDP RK DI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 506 KELIEPSAELKMTENTPDDPRMRKADITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 336
Score = 125 bits (267), Expect = 9e-028
Identities = 66/114 (57%), Positives = 72/114 (63%)
Frame = +2 / +1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MS + GSS VF A GSM S+T A
Sbjct: 340 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSAFLIRGSSGVFSVIFNSAEGSMSSFTASA 519
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA 715
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LSA
Sbjct: 520 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 681
Score = 42.3 bits (86), Expect = 0.009
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +1 / +3
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 501 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 680
Query: 715 L 717
L
Sbjct: 681 L 683
>gb|CO168770.1|CO168770 NDL1_2_A02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_2_A02_A029 5', mRNA sequence
Length = 690
Score = 163 bits (351), Expect(2) = 1e-045
Identities = 65/79 (82%), Positives = 69/79 (87%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 402 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 581
Query: 846 TAETLTMDYHRGANLEVRI 790
AETL DYHR LE+RI
Sbjct: 582 VAETLMFDYHRQHGLEIRI 638
Score = 91.8 bits (194), Expect(2) = 5e-021
Identities = 46/69 (66%), Positives = 50/69 (72%)
Frame = +2 / -3
Query: 818 W*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPS 997
W*S + VSA R PSS*QLLTP+GLTLPQ S GC RGSP TS V V R LA L A+P+
Sbjct: 610 W*SNIRVSATRFPSS*QLLTPIGLTLPQYSSF*GCSRGSPYTSDVDVSRILAPTLLASPN 431
Query: 998 MFRVPTTLV 1024
MF VP TLV
Sbjct: 430 MFNVPITLV 404
Score = 45.1 bits (92), Expect(2) = 5e-006
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -2 / +2
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
+DQC EH R E + + * +W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 401 KDQCYRYIEHVRTC*ESWSKDSTNINI*SIW*SSGTSSKGRILGQCQPNWCKKLL**GEA 580
Score = 41.4 bits (84), Expect(2) = 1e-045
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 789 ARIFNTYGPRMCIDDGR 739
ARIFNTYGPRM IDDGR
Sbjct: 640 ARIFNTYGPRMNIDDGR 690
Score = 38.2 bits (77), Expect = 0.15
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / -2
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL LI+T T+ +DIAPV LR+ +RITI
Sbjct: 581 TLPLIITTSYTNWVDIAPVFFLLRMFQRITI 489
Score = 38.2 bits (77), Expect(2) = 0.003
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3 / -1
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH N+ H+ *HCPS P EDHH
Sbjct: 582 HASPHHNNFLHQLG*HCPSILPFEDVPEDHH 490
Score = 30.4 bits (60), Expect(2) = 5e-021
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 740 RPSSMHMRGPYVLKIRA 790
RPSSM +RGP VL IRA
Sbjct: 689 RPSSMFIRGP*VLNIRA 639
Score = 26.3 bits (51), Expect(2) = 5e-006
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 775 YIWPSHVH*RWP 740
Y+W ++ H*RWP
Sbjct: 654 YLWATNEH*RWP 689
Score = 23.5 bits (45), Expect(2) = 0.003
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / -3
Query: 741 GHRQCTCEGHMY* 779
GHRQC+ H Y*
Sbjct: 688 GHRQCSFVAHRY* 650
>gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G05_A029 3', mRNA sequence
Length = 705
Score = 181 bits (389), Expect = 1e-044
Identities = 73/115 (63%), Positives = 90/115 (78%)
Frame = -3 / -1
Query: 714 ALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQD 535
ALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++
Sbjct: 705 ALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKE 526
Query: 534 TIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
I+P+A ++ +NT DDP RK DI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 525 LIEPSAELKMTENTPDDPRMRKADITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 361
Score = 123 bits (263), Expect = 3e-027
Identities = 65/113 (57%), Positives = 71/113 (62%)
Frame = +2 / +2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MS + GSS VF A GSM S+T A
Sbjct: 365 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSAFLIRGSSGVFSVIFNSAEGSMSSFTASA 544
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLS 712
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV S LS
Sbjct: 545 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLS 703
Score = 40.5 bits (82), Expect = 0.030
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +1 / +1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q +C
Sbjct: 526 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSEC 705
>gb|CX713895.1|CX713895 RTPQ1_14_D01.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_14_D01_A032 5', mRNA sequence
Length = 680
Score = 177 bits (381), Expect = 2e-043
Identities = 71/85 (83%), Positives = 75/85 (88%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 406 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 585
Query: 846 TAETLTMDYHRGANLEVRIARIFNT 772
AETL DYHR LE+RIARIFNT
Sbjct: 586 VAETLMFDYHRQHGLEIRIARIFNT 660
Score = 101 bits (216), Expect = 1e-020
Identities = 53/90 (58%), Positives = 61/90 (67%)
Frame = +2 / -1
Query: 773 VLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLV 952
VLKIRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V
Sbjct: 659 VLKIRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDV 480
Query: 953 LVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
V + LA A+P++F VP TLV G
Sbjct: 479 EVNKILAPTRLASPNIFNVPITLVFIVFTG 390
Score = 55.1 bits (114), Expect = 1e-006
Identities = 27/90 (30%), Positives = 50/90 (55%)
Frame = +1 / -3
Query: 775 IEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGT 954
IE++ + NL +V++ F TL+ I+ ++ ++I P+ L L +L+R+TID
Sbjct: 657 IENSSNANL*TMLSVIVKH*CFCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC* 478
Query: 955 GEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
G++ + L S+H+Q NH+ L R+
Sbjct: 477 GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 388
>gb|BQ697144.1|BQ697144 NXPV_050_A11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_050_A11 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 484
Score = 177 bits (380), Expect = 2e-043
Identities = 74/97 (76%), Positives = 78/97 (80%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEV L+HPQ E YWGNVNPIGVRSCYDE KR
Sbjct: 187 KTNVIGTLNMLGLAKRVGARILLTSTSEVXXXXLEHPQKEEYWGNVNPIGVRSCYDEXKR 366
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRV 736
AETL DYHR L +RIARIFNTYG M IDDGRV
Sbjct: 367 VAETLMFDYHRQHGLXIRIARIFNTYGXXMNIDDGRV 477
Score = 97.7 bits (207), Expect = 2e-019
Identities = 54/102 (52%), Positives = 62/102 (60%)
Frame = +2 / -3
Query: 737 TRPSSMHMRGPYVLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTC 916
TRPSSM P VLKIRA+ + *S +NVSA R SS*QLLTP+GLTLPQ S C
Sbjct: 476 TRPSSMFXXXP*VLKIRAMRIXKPCCL**SNINVSATRFXSS*QLLTPIGLTLPQYSSFC 297
Query: 917 GCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
GC R TS V V + LA A+P++F VP TLV G
Sbjct: 296 GCSRXXXXTSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 171
Score = 57.9 bits (120), Expect = 2e-007
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +1 / -2
Query: 736 NTAIVNAHARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHL 915
NT+I+N H I IE++ + N +V++ F TL I+ ++ ++I P+ L L
Sbjct: 477 NTSIINVHXXTISIENSSNANX*TMLSVIVKH*CFCHTLXFIIATSYSNRVNITPIFLLL 298
Query: 916 RVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
+L+ + G++ + L S+H+Q NH+ L R+
Sbjct: 297 WMLKXVXXXFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 169
>gb|CV036174.1|CV036174 RTNACL1_57_F03.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_F03_A029 3', mRNA sequence
Length = 698
Score = 174 bits (375), Expect = 1e-042
Identities = 69/109 (63%), Positives = 86/109 (78%)
Frame = -3 / +3
Query: 696 LTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNA 517
LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A
Sbjct: 6 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSA 185
Query: 516 RIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DF R+
Sbjct: 186 ELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFPLRL 332
Score = 117 bits (251), Expect = 1e-025
Identities = 61/107 (57%), Positives = 68/107 (63%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R KS +RGRPSR+ GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 328 RRGKSSAIRGRPSRKETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 149
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TV 694
SS++VNSPG PRL GP SPSIS IRPST SET KL V P TV
Sbjct: 148 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTV 8
Score = 35.9 bits (72), Expect = 0.73
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
+L + + +H E + + ++ P +L FH+ +N +RN+ + GL + +++ Q
Sbjct: 167 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAKAAGLSARSLHCQ 6
>gb|BF610263.1|BF610263 NXSI_057_B05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_057_B05 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 338
Score = 174 bits (374), Expect = 2e-042
Identities = 72/106 (67%), Positives = 86/106 (81%)
Frame = -3 / +3
Query: 804 LEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM 625
LE+RIARIFNTYGPRM IDDGRVVSNF+AQALR EP+TV G QTRSF YVSD+V+GL+
Sbjct: 9 LEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLI 188
Query: 624 KLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
+LMEG++ GP NLGNPGEFTMLELA+ V+ I+ + +NT D
Sbjct: 189 RLMEGDNTGPINLGNPGEFTMLELAEAVKXLIETSTTXXMXENTXD 326
Score = 117 bits (251), Expect = 1e-025
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = +2 / -2
Query: 527 SMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSF 706
S+ +T ASSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS
Sbjct: 286 SISXFTASASSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSP 107
Query: 707 LSA*ATKLLTTRPSSMHMRGPYVLKIRAILTS 802
L A*A KLLTTRPSSM +RGP VL IRAI S
Sbjct: 106 LRA*AIKLLTTRPSSMFIRGP*VLNIRAIRIS 11
Score = 67.5 bits (141), Expect = 2e-010
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + K +H +L+ ++ + P +++FH + T+N IRNI E GL S ++ +
Sbjct: 278 LLHSFSKFQHCKLSWISXIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSHWFTSKG 99
Query: 715 LSNKVTDNTAIVNAHARAICIE 780
LSNK+ DNTAIVN H+ I I+
Sbjct: 98 LSNKIADNTAIVNVHSWPIGIK 33
Score = 42.8 bits (87), Expect(2) = 9e-008
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCSG 713
Y+W ++ H*RWPCCQ CSG
Sbjct: 38 YLWATNEH*RWPCCQQFYCSG 100
Score = 35.4 bits (71), Expect = 1.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -3
Query: 714 PEQQSY*QHGHRQCTCEGHMY* 779
PEQ + *QHGHRQC+ H Y*
Sbjct: 99 PEQ*NC*QHGHRQCSFVAHRY* 34
Score = 34.5 bits (69), Expect(2) = 9e-008
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 136 EHKPEASAMFLIWLMV*FG*WKEIILG 216
Score = 28.6 bits (56), Expect(2) = 1.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2 / +2
Query: 670 NQEFPICF*SG*GSDEADGRRACGAIQPG*PWRVHHA*ACQGC 542
N + +CF* G* + A+GRR A + RV++A C C
Sbjct: 143 NPKLLLCF*YG*WFNSANGRR*YWAYKSXKSRRVYNAGTC*SC 271
Score = 24.0 bits (46), Expect(2) = 1.2
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 752 LTMAVLSVTLLLR 714
LTMAVLS LLLR
Sbjct: 61 LTMAVLSAILLLR 99
>gb|BF777810.1|BF777810 NXSI_075_H12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_075_H12 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 466
Score = 172 bits (371), Expect = 4e-042
Identities = 67/103 (65%), Positives = 84/103 (81%)
Frame = -3 / +1
Query: 678 GKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRK 499
G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +
Sbjct: 10 GTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTE 189
Query: 498 NTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 190 NTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 318
Score = 120 bits (257), Expect = 2e-026
Identities = 61/102 (59%), Positives = 67/102 (65%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 314 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 135
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFP 679
SS++VNSPG PRL GP SPSIS IRPST SET KL V P
Sbjct: 134 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VP 9
Score = 36.8 bits (74), Expect = 0.39
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1 / -2
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGL 672
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL
Sbjct: 153 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGL 16
>gb|BX251375.1|BX251375 BX251375 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP048G12 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 673
Score = 169 bits (364), Expect = 4e-041
Identities = 68/82 (82%), Positives = 72/82 (87%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 428 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 607
Query: 846 TAETLTMDYHRGANLEVRIARI 781
AETL DYHR LE+RIARI
Sbjct: 608 VAETLMFDYHRQHGLEIRIARI 673
Score = 94.1 bits (199), Expect = 2e-018
Identities = 49/87 (56%), Positives = 57/87 (65%)
Frame = +2 / -2
Query: 782 IRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVR 961
IRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V
Sbjct: 672 IRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVN 493
Query: 962 RNLALILFANPSMFRVPTTLVLCYHKG 1042
+ LA A+P++F VP T V G
Sbjct: 492 KILAPTRLASPNIFNVPITFVFIVFTG 412
Score = 49.2 bits (101), Expect = 7e-005
Identities = 25/88 (28%), Positives = 48/88 (54%)
Frame = +1 / -1
Query: 781 DTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGE 960
++ + NL +V++ F TL+ I+ A ++ ++I P+ L L +L+R+TID G+
Sbjct: 673 NSSNANL*TMLSVIVKH*CFCHTLSFIIAASYSNWVNITPIFLLLWMLKRVTIDFRC*GQ 494
Query: 961 EEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
+ + L +H+Q NH+ L R+
Sbjct: 493 QNSCTNSLGKPQHIQCANHVCLYCLHRI 410
>gb|BX254898.1|BX254898 BX254898 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP107A09 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 672
Score = 169 bits (364), Expect = 4e-041
Identities = 68/82 (82%), Positives = 72/82 (87%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 427 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 606
Query: 846 TAETLTMDYHRGANLEVRIARI 781
AETL DYHR LE+RIARI
Sbjct: 607 VAETLMFDYHRQHGLEIRIARI 672
Score = 94.1 bits (199), Expect = 2e-018
Identities = 49/87 (56%), Positives = 57/87 (65%)
Frame = +2 / -2
Query: 782 IRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVR 961
IRA+ S+ *S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V
Sbjct: 671 IRAMRISKPCCL**SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVN 492
Query: 962 RNLALILFANPSMFRVPTTLVLCYHKG 1042
+ LA A+P++F VP T V G
Sbjct: 491 KILAPTRLASPNIFNVPITFVFIVFTG 411
Score = 49.2 bits (101), Expect = 7e-005
Identities = 25/88 (28%), Positives = 48/88 (54%)
Frame = +1 / -1
Query: 781 DTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGE 960
++ + NL +V++ F TL+ I+ A ++ ++I P+ L L +L+R+TID G+
Sbjct: 672 NSSNANL*TMLSVIVKH*CFCHTLSFIIAASYSNWVNITPIFLLLWMLKRVTIDFRC*GQ 493
Query: 961 EEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
+ + L +H+Q NH+ L R+
Sbjct: 492 QNSCTNSLGKPQHIQCANHVCLYCLHRI 409
>gb|CX652950.1|CX652950 COLD1_62_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_B04_A029 5', mRNA sequence
Length = 733
Score = 168 bits (361), Expect = 1e-040
Identities = 65/100 (65%), Positives = 82/100 (82%)
Frame = -3 / -2
Query: 669 TRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQ 490
TRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT
Sbjct: 732 TRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTP 553
Query: 489 DDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 552 DDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 433
Score = 118 bits (252), Expect = 1e-025
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / +2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSR+ GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 437 RRRKSSAIRGRPSRKETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 616
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLV 670
SS++VNSPG PRL GP SPSIS IRPST SET KL V
Sbjct: 617 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV 733
Score = 33.1 bits (66), Expect = 4.9
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +1 / +1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPG 669
+L + + +H E + + ++ P +L FH+ +N +RN+ + G
Sbjct: 598 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAKAAG 732
>gb|BF518118.1|BF518118 NXSI_035_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_035_C02 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 338
Score = 166 bits (358), Expect = 3e-040
Identities = 69/106 (65%), Positives = 84/106 (79%)
Frame = -3 / +3
Query: 804 LEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM 625
LE+RIARIFNTYGPRM IDDGRVVSNF+AQ LR EP+TV G QTRSF YVSD+V+GL+
Sbjct: 9 LEIRIARIFNTYGPRMNIDDGRVVSNFIAQXLRGEPMTVQAPGTQTRSFCYVSDMVDGLI 188
Query: 624 KLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQD 487
+LMEG++ GP NL PGEFTMLELA+ V+ I+ + + +NT D
Sbjct: 189 RLMEGDNTGPINLXXPGEFTMLELAEAVKXLIETSTTVXMVENTPD 326
Score = 111 bits (237), Expect = 1e-023
Identities = 58/92 (63%), Positives = 63/92 (68%)
Frame = +2 / -2
Query: 527 SMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSF 706
S+ +T ASSS+VNSPG R GP SPSIS I+PST SET KL VC P TV GS
Sbjct: 286 SISXFTASASSSIVNSPGXXRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSP 107
Query: 707 LSA*ATKLLTTRPSSMHMRGPYVLKIRAILTS 802
L *A KLLTTRPSSM +RGP VL IRAI S
Sbjct: 106 LRX*AIKLLTTRPSSMFIRGP*VLNIRAIRIS 11
Score = 65.2 bits (136), Expect = 1e-009
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +1 / -1
Query: 517 CVGVDGVLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
C + +L + K +H +L+ + P +++FH + T+N IRNI E GL S ++
Sbjct: 296 C*CFNKLLHSFSKFQHCKLSWXXXIYRPSIISFH*PN*TINHIRNIAEASGLCSWGLDSH 117
Query: 697 GLLPQCLSNKVTDNTAIVNAHARAICIE 780
+ LSNK+ DNTAIVN H+ I I+
Sbjct: 116 WFTSKGLSNKIADNTAIVNVHSWPIGIK 33
Score = 40.0 bits (81), Expect(2) = 6e-007
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2 / +2
Query: 775 YIWPSHVH*RWPCCQ*LCCS 716
Y+W ++ H*RWPCCQ CS
Sbjct: 38 YLWATNEH*RWPCCQQFYCS 97
Score = 34.5 bits (69), Expect(2) = 6e-007
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1 / +1
Query: 677 ESKPGVSNMFLIWLRV**S*WKASMWG 597
E KP S MFLIWL V* *WK + G
Sbjct: 136 EHKPEASAMFLIWLMV*FG*WKEIILG 216
Score = 32.2 bits (64), Expect = 9.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / -3
Query: 717 EQQSY*QHGHRQCTCEGHMY* 779
EQ + *QHGHRQC+ H Y*
Sbjct: 96 EQ*NC*QHGHRQCSFVAHRY* 34
>gb|BI397899.1|BI397899 NXPV_110_G05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_110_G05 5' similar to Arabidopsis
thaliana sequence At3g62830 dTDP-glucose 4-6-dehydratase
homolog D18 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 250
Score = 166 bits (356), Expect = 5e-040
Identities = 66/76 (86%), Positives = 69/76 (90%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGD L+HPQ E YWGNVNPIGVRSCYDEG R
Sbjct: 23 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDXLEHPQTEAYWGNVNPIGVRSCYDEGXR 202
Query: 846 TAETLTMDYHRGANLE 799
TAETLTM YHRG N+E
Sbjct: 203 TAETLTMXYHRGXNVE 250
Score = 98.7 bits (209), Expect = 9e-020
Identities = 51/81 (62%), Positives = 55/81 (67%)
Frame = +2 / -2
Query: 800 SRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALI 979
S P * +V VSAV PSS*QL TPMGLTLPQ* S GC R SP*TSLVLV + A
Sbjct: 249 STFXPL**XIVRVSAVLXPSS*QLRTPMGLTLPQ*ASV*GCSRXSP*TSLVLVSKKRAPT 70
Query: 980 LFANPSMFRVPTTLVLCYHKG 1042
A+PSMF+VPTTLVL G
Sbjct: 69 RLASPSMFKVPTTLVLIVFTG 7
Score = 73.0 bits (153), Expect = 5e-012
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = +1 / -1
Query: 799 LKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVD 978
L + V+ H Q F C+ LI+ D+DGI+IAPVS LR+ + I+I+ TGT +++ +
Sbjct: 250 LNIXXPVIXHSQSFGCSXXLIIATADSDGINIAPVSFSLRMFKXISINFTGTCKQKACPN 71
Query: 979 PLC*SEHVQSPNHI 1020
L SEHVQ ++I
Sbjct: 70 TLGKSEHVQGSHNI 29
Score = 57.4 bits (119), Expect = 2e-007
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3 / -3
Query: 831 STFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSES 1010
S F+L++ PH ++ RWD*HCPSK D H+ HWY * + + +RACS
Sbjct: 218 SEFRLFSXPHHSNCGLRWD*HCPSKLQFEDVQXDLHKLHWYL*AKSVPQHAWQVRACSRF 39
Query: 1011 QPH 1019
H
Sbjct: 38 PQH 30
Score = 50.1 bits (103), Expect = 4e-005
Identities = 29/69 (42%), Positives = 38/69 (55%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR +LL *G
Sbjct: 22 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL**GXE 201
Query: 847 YS*NVDHGL 821
S N D+ L
Sbjct: 202 NSRNSDYXL 228
>gb|BX254458.1|BX254458 BX254458 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP098G10 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 695
Score = 165 bits (355), Expect = 7e-040
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 456 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 635
Query: 846 TAETLTMDYHRGANLEVRIA 787
AETL DYHR LE+RIA
Sbjct: 636 VAETLMFDYHRQHGLEIRIA 695
Score = 92.3 bits (195), Expect = 8e-018
Identities = 49/79 (62%), Positives = 53/79 (67%)
Frame = +2 / -2
Query: 788 AILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRN 967
AI S W*S + VSA R PSS*QLLTP+GLTLPQ S GC RGSP TS V V R
Sbjct: 694 AIRISNPCCLW*SNIRVSATRFPSS*QLLTPIGLTLPQYSSF*GCSRGSPYTSDVDVSRI 515
Query: 968 LALILFANPSMFRVPTTLV 1024
LA L A+P+MF VP TLV
Sbjct: 514 LAPTLLASPNMFNVPITLV 458
Score = 45.1 bits (92), Expect = 0.001
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -2 / +2
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
+DQC EH R E + + * +W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 455 KDQCYRYIEHVRTC*ESWSKDSTNINI*SIW*SSGTSSKGRILGQCQPNWCKKLL**GEA 634
Score = 40.0 bits (81), Expect = 0.042
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL LI+TA T+ +DIAPV LR+ +RITI
Sbjct: 635 TLPLIITASYTNWVDIAPVFFLLRMFQRITI 543
Score = 39.6 bits (80), Expect = 0.058
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3 / -3
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH NS H+ *HCPS P EDHH
Sbjct: 636 HASPHHNSFLHQLG*HCPSILPFEDVPEDHH 544
>gb|BE643911.1|BE643911 NXCI_048_H08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_048_H08 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 418
Score = 163 bits (351), Expect = 2e-039
Identities = 66/110 (60%), Positives = 81/110 (73%)
Frame = -3 / +2
Query: 708 RKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTI 529
R E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I
Sbjct: 20 RGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELI 199
Query: 528 DPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFR 379
+P+A ++ +NT DDP KPDI+ K LGWEPK+ LR LP M D R
Sbjct: 200 EPSAELKMTENTPDDPRMXKPDITXXKTLLGWEPKVSLRXXLPRMAEDXR 349
Score = 117 bits (251), Expect = 1e-025
Identities = 61/108 (56%), Positives = 67/108 (62%)
Frame = +2 / -2
Query: 380 RKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASS 559
RKS +RGR SRR GSHPR +MSG + GSS VF A GSM S+T ASS
Sbjct: 348 RKSSAIRGRXSRRETLGSHPRRVXXXVMSGFXIRGSSGVFSVIFNSAEGSMSSFTASASS 169
Query: 560 SMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGS 703
++VNSPG PRL GP SPSIS IRPST SET KL V P TV S
Sbjct: 168 NIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSS 25
Score = 38.6 bits (78), Expect = 0.11
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +1 / -1
Query: 535 VLDNLGKLKHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQC 714
+L + + +H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q C
Sbjct: 193 LLHSFSEFQHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQFFTSVC 14
>gb|BQ695460.1|BQ695460 NXPV_028_G04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_028_G04 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 453
Score = 162 bits (349), Expect = 5e-039
Identities = 66/89 (74%), Positives = 70/89 (78%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNP GVRSCYD KR
Sbjct: 187 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPXGVRSCYDXXKR 366
Query: 846 TAETLTMDYHRGANLEVRIARIFNTYGPR 760
AETL DYHR +RIAR NT PR
Sbjct: 367 VAETLMFDYHRQHXXXIRIARXXNTXXPR 453
Score = 89.5 bits (189), Expect = 5e-017
Identities = 45/74 (60%), Positives = 51/74 (68%)
Frame = +2 / -2
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S +NVSA R SS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++
Sbjct: 392 *SNINVSATRFXSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNI 213
Query: 1001 FRVPTTLVLCYHKG 1042
F VP TLV G
Sbjct: 212 FNVPITLVFIVFTG 171
Score = 53.8 bits (111), Expect = 3e-006
Identities = 28/95 (29%), Positives = 49/95 (51%)
Frame = +1 / -1
Query: 760 ARAICIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
AR I + + NL +V++ F TL+ I+ + ++I P+ L L +L+R+TI
Sbjct: 453 ARXXXIXXSSNANLXXMLSVIVKH*CFCHTLSXIIATSYSXRVNITPIFLLLWMLKRVTI 274
Query: 940 DLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
D G++ + L S+H+Q NH+ L R+
Sbjct: 273 DFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 169
>gb|BM492831.1|BM492831 NXRV_031_E12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_031_E12 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 303
Score = 160 bits (344), Expect = 2e-038
Identities = 63/74 (85%), Positives = 65/74 (87%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVR CYDEG
Sbjct: 80 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRXCYDEGXX 259
Query: 846 TAETLTMDYHRGAN 805
T ETLTMDYHR N
Sbjct: 260 TPETLTMDYHRXXN 301
Score = 95.5 bits (202), Expect = 9e-019
Identities = 48/74 (64%), Positives = 52/74 (70%)
Frame = +2 / -1
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S+V VS V PSS* TPMGLTLPQ* S GC RGSP*TSLVLV + A A+PSM
Sbjct: 285 *SIVRVSGVXXPSS*XXRTPMGLTLPQ*ASV*GCSRGSP*TSLVLVSKKRAPTRLASPSM 106
Query: 1001 FRVPTTLVLCYHKG 1042
F+VPTTLVL G
Sbjct: 105 FKVPTTLVLIVFTG 64
Score = 76.2 bits (160), Expect = 5e-013
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1 / -3
Query: 805 VGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPL 984
+ + V+IH Q F C LI+ D+DGI+IAPVS LR+ +RI+I+ TGT +++ + L
Sbjct: 301 IXSPVIIHSQSFGCXXTLIIAXADSDGINIAPVSFSLRMFKRISINFTGTCKQKACPNTL 122
Query: 985 C*SEHVQSPNHI 1020
SEHVQ ++I
Sbjct: 121 GKSEHVQGSHNI 86
Score = 60.2 bits (125), Expect = 4e-008
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +3 / -2
Query: 822 NPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRAC 1001
NP S F++ PH + RWD*HCPSK ED H+ HWY * + + +RAC
Sbjct: 284 NP*SEFRVXXXPHHSXCGLRWD*HCPSKLQFEDVQEDLHKLHWYL*AKSVPQHAWQVRAC 105
Query: 1002 SESQPH 1019
S H
Sbjct: 104 SRFPQH 87
Score = 49.2 bits (101), Expect = 7e-005
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
Q+ C + EHAR + + ++YQ* LW SS + LLGQC SHR L *G
Sbjct: 79 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPXXL**GXX 258
Query: 847 YS*NVDHGL 821
+ N D+GL
Sbjct: 259 XTRNSDYGL 285
Score = 36.3 bits (73), Expect = 0.53
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -1 / +3
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITT 816
M IL + + +LTGAM IPS S MR K * WI T
Sbjct: 168 MEILLNILKLKLTGAMLIPSESAXAMMRVXXHPKL*LWIIT 290
>gb|CV033955.1|CV033955 RTNACL1_37_D08.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_D08_A029 5', mRNA sequence
Length = 801
Score = 159 bits (342), Expect = 4e-038
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 569 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 748
Query: 846 TAETLTMDYHRGANLEV 796
AETL DYHR LE+
Sbjct: 749 VAETLMFDYHRQHGLEI 799
Score = 91.8 bits (194), Expect = 1e-017
Identities = 46/69 (66%), Positives = 50/69 (72%)
Frame = +2 / -1
Query: 818 W*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPS 997
W*S + VSA R PSS*QLLTP+GLTLPQ S GC RGSP TS V V R LA L A+P+
Sbjct: 777 W*SNIRVSATRFPSS*QLLTPIGLTLPQYSSF*GCSRGSPYTSDVDVSRILAPTLLASPN 598
Query: 998 MFRVPTTLV 1024
MF VP TLV
Sbjct: 597 MFNVPITLV 571
Score = 45.1 bits (92), Expect = 0.001
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQA 848
+DQC EH R E + + * +W*SS + G +LGQCQ + C++LL *G+A
Sbjct: 568 KDQCYRYIEHVRTC*ESWSKDSTNINI*SIW*SSGTSSKGRILGQCQPNWCKKLL**GEA 747
Score = 38.2 bits (77), Expect = 0.15
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / -3
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITI 939
TL LI+T T+ +DIAPV LR+ +RITI
Sbjct: 748 TLPLIITTSYTNWVDIAPVFFLLRMFQRITI 656
Score = 38.2 bits (77), Expect = 0.15
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3 / -2
Query: 846 YACPHRNSS*HRWD*HCPSKSPPAGAGEDHH 938
+A PH N+ H+ *HCPS P EDHH
Sbjct: 749 HASPHHNNFLHQLG*HCPSILPFEDVPEDHH 657
>gb|BQ701890.1|BQ701890 NXSI_121_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_H02 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 551
Score = 157 bits (338), Expect = 1e-037
Identities = 63/80 (78%), Positives = 67/80 (83%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ YWGNVNPIGVRSCYDEGKR
Sbjct: 311 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKXEYWGNVNPIGVRSCYDEGKR 490
Query: 846 TAETLTMDYHRGANLEVRIA 787
AETL DYHR +RIA
Sbjct: 491 VAETLMFDYHRQHGXXIRIA 550
Score = 91.8 bits (194), Expect = 1e-017
Identities = 45/74 (60%), Positives = 51/74 (68%)
Frame = +2 / -3
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S +NVSA R PSS*QLLTP+GLTLPQ CGC RGSP*TS V V + LA A+P++
Sbjct: 516 *SNINVSATRFPSS*QLLTPIGLTLPQYSXFCGCSRGSP*TSDVEVNKILAPTRLASPNI 337
Query: 1001 FRVPTTLVLCYHKG 1042
F VP TLV G
Sbjct: 336 FNVPITLVFIVFTG 295
Score = 47.3 bits (97), Expect = 3e-004
Identities = 22/77 (28%), Positives = 42/77 (54%)
Frame = +1 / -2
Query: 814 TVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*S 993
+V++ F TL+ I+ ++ ++I P+ L +L+R+TID G++ + L S
Sbjct: 523 SVIVKH*CFCHTLSFIIATSYSNRVNITPIFXLLWMLKRVTIDFRC*GQQNSCTNSLGKS 344
Query: 994 EHVQSPNHIGLVLSQRL 1044
+H+Q NH+ L R+
Sbjct: 343 QHIQCANHVSLYCLHRI 293
>gb|BX254312.1|BX254312 BX254312 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP096F02 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 647
Score = 155 bits (334), Expect = 5e-037
Identities = 61/71 (85%), Positives = 64/71 (90%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 427 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 606
Query: 846 TAETLTMDYHR 814
AETL DYHR
Sbjct: 607 VAETLMFDYHR 639
Score = 91.8 bits (194), Expect = 1e-017
Identities = 45/74 (60%), Positives = 51/74 (68%)
Frame = +2 / -1
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++
Sbjct: 632 *SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNI 453
Query: 1001 FRVPTTLVLCYHKG 1042
F VP T V G
Sbjct: 452 FNVPITFVFIVFTG 411
Score = 47.8 bits (98), Expect = 2e-004
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +1 / -3
Query: 814 TVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*S 993
+V++ F TL+ I+ A ++ ++I P+ L L +L+R+TID G++ + L
Sbjct: 639 SVIVKH*CFCHTLSFIIAASYSNWVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKP 460
Query: 994 EHVQSPNHIGLVLSQRL 1044
+H+Q NH+ L R+
Sbjct: 459 QHIQCANHVCLYCLHRI 409
>gb|DR022670.1|DR022670 STRS1_52_E04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_E04_A034 5', mRNA sequence
Length = 541
Score = 155 bits (333), Expect = 7e-037
Identities = 60/77 (77%), Positives = 71/77 (92%)
Frame = -3 / +2
Query: 597 PFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIP 418
PFNLGNPGEFTMLELA+VV++TID +ARIEF++NT DDPHKRKPDI++AK+ L WEP+I
Sbjct: 2 PFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRIS 181
Query: 417 LREGLPLMVSDFRKRIF 367
LREGLPLMV DFRKR+F
Sbjct: 182 LREGLPLMVEDFRKRVF 232
Score = 98.7 bits (209), Expect = 9e-020
Identities = 48/77 (62%), Positives = 56/77 (72%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 231 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 52
Query: 548 LASSSMVNSPGLPRLNG 598
ASS++VNSPGLPRL G
Sbjct: 51 *ASSNIVNSPGLPRLKG 1
>gb|CV032286.1|CV032286 RTNACL1_7_D03.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_D03_A029 3', mRNA sequence
Length = 694
Score = 153 bits (329), Expect = 3e-036
Identities = 58/92 (63%), Positives = 75/92 (81%)
Frame = -3 / +1
Query: 645 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKP 466
D+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKP
Sbjct: 1 DMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKP 180
Query: 465 DISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
DI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 181 DITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 276
Score = 111 bits (237), Expect = 1e-023
Identities = 54/89 (60%), Positives = 60/89 (67%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 272 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 93
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPST 640
SS++VNSPG PRL GP SPSIS IRPST
Sbjct: 92 SSNIVNSPGFPRLIGPVFSPSISLIRPST 6
>gb|CV032365.1|CV032365 RTNACL1_7_D03.g2_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_D03_A029 5', mRNA sequence
Length = 639
Score = 153 bits (329), Expect = 3e-036
Identities = 60/70 (85%), Positives = 63/70 (90%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKR
Sbjct: 430 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEGKR 609
Query: 846 TAETLTMDYH 817
AETL DYH
Sbjct: 610 VAETLMFDYH 639
Score = 93.6 bits (198), Expect = 3e-018
Identities = 46/74 (62%), Positives = 52/74 (70%)
Frame = +2 / -2
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S +NVSA R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++
Sbjct: 635 *SNINVSATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNI 456
Query: 1001 FRVPTTLVLCYHKG 1042
F VP TLV G
Sbjct: 455 FNVPITLVFIVFTG 414
Score = 49.2 bits (101), Expect = 7e-005
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +1 / -1
Query: 838 FSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNH 1017
F TL+ I+ ++ ++I P+ L L +L+R+TID G++ + L S+H+Q NH
Sbjct: 618 FCHTLSFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANH 439
Query: 1018 IGLVLSQRL 1044
+ L R+
Sbjct: 438 VSLYCLHRI 412
>gb|CX646066.1|CX646066 COLD1_7_C08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_7_C08_A029 3', mRNA sequence
Length = 751
Score = 153 bits (329), Expect = 3e-036
Identities = 58/92 (63%), Positives = 75/92 (81%)
Frame = -3 / +1
Query: 645 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKP 466
D+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKP
Sbjct: 1 DMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKP 180
Query: 465 DISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
DI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 181 DITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 276
Score = 111 bits (237), Expect = 1e-023
Identities = 54/89 (60%), Positives = 60/89 (67%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 272 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 93
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPST 640
SS++VNSPG PRL GP SPSIS IRPST
Sbjct: 92 SSNIVNSPGFPRLIGPVFSPSISLIRPST 6
>gb|DR069646.1|DR069646 RTDK1_8_C04.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_8_C04_A029 5', mRNA sequence
Length = 728
Score = 153 bits (329), Expect = 3e-036
Identities = 58/92 (63%), Positives = 75/92 (81%)
Frame = -3 / -1
Query: 645 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKP 466
D+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKP
Sbjct: 728 DMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKP 549
Query: 465 DISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
DI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 548 DITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 453
Score = 110 bits (234), Expect = 3e-023
Identities = 53/89 (59%), Positives = 60/89 (67%)
Frame = +2 / +1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSR+ GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 457 RRRKSSAIRGRPSRKETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 636
Query: 554 SSSMVNSPGLPRLNGPTCSPSISFIRPST 640
SS++VNSPG PRL GP SPSIS IRPST
Sbjct: 637 SSNIVNSPGFPRLIGPVFSPSISLIRPST 723
>gb|BF778456.1|BF778456 NXSI_085_A03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_085_A03 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 415
Score = 152 bits (327), Expect = 5e-036
Identities = 60/71 (84%), Positives = 63/71 (88%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDE KR
Sbjct: 197 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDEXKR 376
Query: 846 TAETLTMDYHR 814
AETL DYHR
Sbjct: 377 VAETLMFDYHR 409
Score = 89.5 bits (189), Expect = 5e-017
Identities = 45/74 (60%), Positives = 51/74 (68%)
Frame = +2 / -2
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S +NVSA R SS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++
Sbjct: 402 *SNINVSATRFXSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNI 223
Query: 1001 FRVPTTLVLCYHKG 1042
F VP TLV G
Sbjct: 222 FNVPITLVFIVFTG 181
Score = 49.6 bits (102), Expect = 5e-005
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +1 / -1
Query: 814 TVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*S 993
+V++ F TL I+ ++ ++I P+ L L +L+R+TID G++ + L S
Sbjct: 409 SVIVKH*CFXHTLXFIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKS 230
Query: 994 EHVQSPNHIGLVLSQRL 1044
+H+Q NH+ L R+
Sbjct: 229 QHIQCANHVSLYCLHRI 179
>gb|DR022522.1|DR022522 STRS1_51_E04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_51_E04_A034 5', mRNA sequence
Length = 572
Score = 151 bits (325), Expect = 9e-036
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = -3 / +3
Query: 600 GPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKI 421
GPF LG PGEFTMLELA+VV++TID +ARIEF++NT DDPHKRKPDI++AK+ L WEP+I
Sbjct: 3 GPFXLGXPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRI 182
Query: 420 PLREGLPLMVSDFRKRIF 367
LREGLPLMV DFRKR+F
Sbjct: 183 SLREGLPLMVEDFRKRVF 236
Score = 97.3 bits (206), Expect = 2e-019
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 235 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 56
Query: 548 LASSSMVNSPGLPRLNGP 601
ASS++VNSPG PR GP
Sbjct: 55 *ASSNIVNSPGXPRXKGP 2
>gb|BE996944.1|BE996944 NXCI_102_G11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_102_G11 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 392
Score = 147 bits (316), Expect = 2e-034
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ YWGNVNPIGVRSCYD KR
Sbjct: 167 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKXXYWGNVNPIGVRSCYDXXKR 346
Query: 846 TAETLTMDYHR 814
AETL DYHR
Sbjct: 347 VAETLMFDYHR 379
Score = 87.7 bits (185), Expect = 2e-016
Identities = 44/74 (59%), Positives = 50/74 (67%)
Frame = +2 / -3
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S +NVSA R S*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++
Sbjct: 372 *SNINVSATRXXXS*QLLTPIGLTLPQYXSFCGCSRGSP*TSDVEVNKILAPTRLASPNI 193
Query: 1001 FRVPTTLVLCYHKG 1042
F VP TLV G
Sbjct: 192 FNVPITLVFIVFTG 151
Score = 47.8 bits (98), Expect = 2e-004
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +1 / -2
Query: 814 TVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*S 993
+V++ F TL I+ ++ ++I P+ L +L+R+TID G++ + L S
Sbjct: 379 SVIVKH*CFXHTLXXIIATSYSNRVNITPIXXLLWMLKRVTIDFRC*GQQNSCTNSLGKS 200
Query: 994 EHVQSPNHIGLVLSQRL 1044
+H+Q NH+ L R+
Sbjct: 199 QHIQCANHVSLYCLHRI 149
>gb|DR022603.1|DR022603 STRS1_52_E04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_E04_A034 3', mRNA sequence
Length = 817
Score = 144 bits (310), Expect = 1e-033
Identities = 56/73 (76%), Positives = 67/73 (91%)
Frame = -3 / +2
Query: 585 GNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREG 406
GNPGEFTMLELA+VV++TID +ARIEF++NT DDPHKRKPDI++AK+ L WEP+I LREG
Sbjct: 2 GNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREG 181
Query: 405 LPLMVSDFRKRIF 367
LPLMV DFRKR+F
Sbjct: 182 LPLMVEDFRKRVF 220
Score = 91.8 bits (194), Expect = 1e-017
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 219 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 40
Query: 548 LASSSMVNSPGLP 586
ASS++VNSPGLP
Sbjct: 39 *ASSNIVNSPGLP 1
>gb|CD025271.1|CD025271 NXSI_035_G08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_035_G08 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 180
Score = 142 bits (305), Expect = 5e-033
Identities = 55/60 (91%), Positives = 56/60 (93%)
Frame = -3 / +1
Query: 951 TSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNT 772
TSEVYGDPL HPQ ETYWGNVNPIGVR CYDEGKR AETLTMDYHRGAN+EVRIARIFNT
Sbjct: 1 TSEVYGDPLXHPQTETYWGNVNPIGVRXCYDEGKRXAETLTMDYHRGANVEVRIARIFNT 180
Score = 87.2 bits (184), Expect = 3e-016
Identities = 43/59 (72%), Positives = 46/59 (77%)
Frame = +2 / -2
Query: 773 VLKIRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSL 949
VL IRA+ TS LAPR *S+V VSA RLPSS*Q LTP+GLT PQ VS CG RGSP TSL
Sbjct: 179 VLNIRAMRTSTLAPR**SIVKVSAXRLPSS*QXLTPIGLTFPQYVSVCGXXRGSPYTSL 3
Score = 63.8 bits (133), Expect = 3e-009
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +1 / -1
Query: 772 CIEDTCDPNLKVGTTVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLT 948
C+E TC+ +L +G V++H Q S ALI+T +T IDI+P+ L L + ERI I LT
Sbjct: 180 CVEYTCNADLHIGPPVIVHRQSLSXXFALIITXSNTYRIDISPICLRLWMXERIPIYLT 4
Score = 63.8 bits (133), Expect = 3e-009
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = -2 / +3
Query: 949 Q*GLW*SSPAPAGGDLLGQCQSHRCQELLR*GQAYS*NVDHGLPPWCQP*G*DRTYLQY 773
+*G+W SSP GD+LG+CQS+RC LL *GQ *+ D GL P Q G TY+Q+
Sbjct: 3 K*GIWGSSPXSTDGDILGKCQSYRC*XLL**GQTXX*DFDDGLSPGGQCGGPHCTYIQH 179
Score = 61.1 bits (127), Expect = 2e-008
Identities = 26/55 (47%), Positives = 29/55 (52%)
Frame = +3 / -3
Query: 783 YVRS*PQGWHHGGNPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPH 947
YV+ P W G +P S Q CPH N *H D*H P+ SP GED H PH
Sbjct: 169 YVQCGPPHWPPGDSPSSKSQXXVCPHHNXF*HL*D*HFPNMSPSVDXGEDPHIPH 5
Score = 36.3 bits (73), Expect = 0.53
Identities = 24/54 (44%), Positives = 26/54 (48%)
Frame = -1 / +2
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITTVVPTLRLGSHVSS 777
M ILS R R G MSI V V MRA+ L+ * W T P R HV S
Sbjct: 14 MGILSXIHRRRHIGEMSIL*VLEXVMMRANXXLRL*RWTITGGPMWRSALHVYS 175
>gb|BE123636.1|BE123636 NXNV_150_A12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_150_A12 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 229
Score = 141 bits (302), Expect = 1e-032
Identities = 57/76 (75%), Positives = 60/76 (78%)
Frame = -3 / +1
Query: 996 LGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 817
LGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYD GKR A TL DYH
Sbjct: 1 LGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDXGKRVAXTLMFDYH 180
Query: 816 RGANLEVRIARIFNTY 769
+ RIARI NTY
Sbjct: 181 KQHGXXXRIARIXNTY 228
Score = 77.6 bits (163), Expect = 2e-013
Identities = 41/71 (57%), Positives = 47/71 (66%)
Frame = +2 / -3
Query: 782 IRAILTSRLAPRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVR 961
IRA+ + *S +NV A R PSS*QLLTP+GLTLPQ S CGC RGSP*TS V V
Sbjct: 215 IRAMRXXKPCCL**SNINVXATRFPSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVN 36
Query: 962 RNLALILFANP 994
+ LA A+P
Sbjct: 35 KILAPTRLASP 3
>gb|BE049813.1|BE049813 NXNV_144_E12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_144_E12 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 441
Score = 136 bits (291), Expect = 5e-031
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = -3 / +1
Query: 627 MKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAK 448
++LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI+ K
Sbjct: 1 IRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITXXK 180
Query: 447 EFLGWEPKIPLREGLPLMVSDFRKRI 370
LGWEPK+ LRE LP M DFR R+
Sbjct: 181 TLLGWEPKVSLREXLPRMAEDFRLRL 258
Score = 94.1 bits (199), Expect = 2e-018
Identities = 47/83 (56%), Positives = 53/83 (63%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGR SRR GSHPR +MSG + GSS VF A GSM S+T A
Sbjct: 254 RRRKSSAIRGRXSRRETLGSHPRRVFXFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 75
Query: 554 SSSMVNSPGLPRLNGPTCSPSIS 622
SS++VNSPG PRL GP SPSIS
Sbjct: 74 SSNIVNSPGFPRLIGPVFSPSIS 6
>gb|CO367722.1|CO367722 RTK1_36_C12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_C12_A029 3', mRNA sequence
Length = 775
Score = 136 bits (291), Expect = 5e-031
Identities = 53/70 (75%), Positives = 64/70 (91%)
Frame = -3 / +2
Query: 576 GEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPL 397
GEFTMLELA+VV++TID +ARIEF++NT DDPHKRKPDI++AK+ L WEP+I LREGLPL
Sbjct: 2 GEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPL 181
Query: 396 MVSDFRKRIF 367
MV DFRKR+F
Sbjct: 182 MVEDFRKRVF 211
Score = 84.0 bits (177), Expect = 2e-015
Identities = 42/70 (60%), Positives = 50/70 (71%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTT 547
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+TT
Sbjct: 210 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 31
Query: 548 LASSSMVNSP 577
ASS++VNSP
Sbjct: 30 *ASSNIVNSP 1
>gb|BQ699855.1|BQ699855 NXRV122_E03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV122_E03 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 661
Score = 133 bits (285), Expect = 3e-030
Identities = 53/71 (74%), Positives = 56/71 (78%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KT V+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGN PIGVRSCYD KR
Sbjct: 432 KTYVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNXXPIGVRSCYDXXKR 611
Query: 846 TAETLTMDYHR 814
A DYHR
Sbjct: 612 VAXXXMFDYHR 644
Score = 73.5 bits (154), Expect = 4e-012
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = +2 / -1
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSM 1000
*S + A R S*QLLTP+G LPQ S CGC RGSP*TS V V + LA A+P++
Sbjct: 637 *SNIXXXATRFXXS*QLLTPIGXXLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNI 458
Query: 1001 FRVPTTLVLCYHKG 1042
F VP T V G
Sbjct: 457 FNVPITYVFIVFTG 416
Score = 44.1 bits (90), Expect = 0.002
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +1 / -3
Query: 814 TVVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*S 993
+V++ TL I+ ++ I P+ L L +L+R+TID G++ + L S
Sbjct: 644 SVIVKHXXXXHTLXXIIATSYSNRXXITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKS 465
Query: 994 EHVQSPNHIGLVLSQRL 1044
+H+Q NH+ L R+
Sbjct: 464 QHIQCANHVCLYCLHRI 414
>gb|CD025786.1|CD025786 NXSI_081_C08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_081_C08 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 180
Score = 131 bits (280), Expect = 1e-029
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3 / +2
Query: 813 GANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDL 640
GAN+EVRIARIFNTYGPRMC+DDGRVVSNFVAQ LRKEPLTVYGDGKQTRSF +VSDL
Sbjct: 2 GANVEVRIARIFNTYGPRMCLDDGRVVSNFVAQXLRKEPLTVYGDGKQTRSFXFVSDL 175
Score = 109 bits (233), Expect = 5e-023
Identities = 48/60 (80%), Positives = 49/60 (81%)
Frame = +2 / -1
Query: 635 STRSETYWKLLVCFPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGPYVLKIRAILTSRLAP 814
S RSET WKL VCFPSP*TVKGS *ATKLLTTRPSS H+RGPYVLKIRAI TS AP
Sbjct: 180 SXRSETXWKLRVCFPSP*TVKGSLRKX*ATKLLTTRPSSRHIRGPYVLKIRAIRTSTFAP 1
Score = 68.4 bits (143), Expect = 1e-010
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +1 / -3
Query: 640 QIRNILETPGLLSITINRQGLLPQCLSNKVTDNTAIVNAHARAICIEDTCDPNLKV 807
QI N ETP L I+I+ Q LL Q LSNK+T N I+ AH+R +CIE++ +PNL +
Sbjct: 175 QIGNEXETPCLFPISIDCQRLLAQXLSNKITYNPTIIKAHSRTVCIENSSNPNLNI 8
Score = 55.6 bits (115), Expect = 9e-007
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = -2 / +1
Query: 802 *G*DRTYLQYIWPSHVH*RWPCCQ*LCCSGTEEGALDGLW*WKANQEFPICF 647
*G D + QYI ++V * W C+* CCS +GA D LW W+ + EFP F
Sbjct: 13 *GSDCSNFQYIRSANVP**WSGCK*FCCSXFAQGAFDSLWRWETDTEFPXRF 168
Score = 51.5 bits (106), Expect = 1e-005
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +3 / -2
Query: 642 DQKHIGNSWFAFHHHKPSRAPSSVPEQQSY*QHGHRQCTCEGHMY*RYVRS*PQ 803
D+K GNS H H+ S+AP + EQQ+Y Q H Q T MY*++ +S PQ
Sbjct: 173 DRKRXGNSVSVSHLHRLSKAPCAKXEQQNYLQPDHHQGTFADRMY*KFEQSEPQ 12
Score = 37.3 bits (75), Expect = 0.28
Identities = 25/54 (46%), Positives = 28/54 (51%)
Frame = -1 / +3
Query: 803 LRLGSHVSSIHMALACALTMAVLSVTLLLRH*GRSP*RFMVMESKPGVSNMFLI 642
LR G SIH CAL M L V LLL RS *+ M M ++ GVS F I
Sbjct: 12 LRFGLLEFSIHTVRECALMMVGL*VILLLXLCARSL*QSMEMGNRHGVSXSFPI 173
>gb|BE582441.1|BE582441 NXCI_033_D07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_033_D07 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 363
Score = 128 bits (275), Expect = 7e-029
Identities = 51/65 (78%), Positives = 54/65 (83%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLA R+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYD KR
Sbjct: 167 KTNVIGTLNMLGLAXRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDXXKR 346
Query: 846 TAETL 832
L
Sbjct: 347 VXXXL 361
Score = 79.4 bits (167), Expect = 6e-014
Identities = 39/71 (54%), Positives = 45/71 (63%)
Frame = +2 / -1
Query: 830 VNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRV 1009
+N R S*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA A+P++F V
Sbjct: 363 INXXXTRXXXS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILAPTRXASPNIFNV 184
Query: 1010 PTTLVLCYHKG 1042
P TLV G
Sbjct: 183 PITLVFIVFTG 151
Score = 47.8 bits (98), Expect = 2e-004
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1 / -3
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGL 1026
TL I+ ++ ++I P+ L L +L+R+TID G++ + L S+H+Q NH+ L
Sbjct: 346 TLXXIIATSYSNRVNITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLXKSQHIQCANHVSL 167
Query: 1027 VLSQRL 1044
R+
Sbjct: 166 YCLHRI 149
>gb|CD024639.1|CD024639 NXRV067_G06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_G06 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 192
Score = 126 bits (269), Expect = 5e-028
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ YWGNVNPI VRSCYD KR
Sbjct: 7 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQXXEYWGNVNPIXVRSCYDXRKR 186
Query: 846 TA 841
A
Sbjct: 187 VA 192
Score = 71.2 bits (149), Expect = 2e-011
Identities = 36/61 (59%), Positives = 41/61 (67%)
Frame = +2 / -2
Query: 842 AVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTL 1021
A R S*QLLT +GLTLPQ CGC RGSP*TS V V + LA A+P++F VP TL
Sbjct: 191 ATRFLXS*QLLTXIGLTLPQYSXFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITL 12
Query: 1022 V 1024
V
Sbjct: 11 V 9
Score = 42.8 bits (87), Expect = 0.006
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1 / -1
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGL 1026
TL+ I+ ++I P+ L +L+R+TID G++ + L S+H+Q NH+ L
Sbjct: 186 TLSXIIATSYXYRVNITPIFXXLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSL 7
>gb|CD024512.1|CD024512 NXRV_044_A01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_044_A01 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 177
Score = 124 bits (265), Expect = 2e-027
Identities = 49/58 (84%), Positives = 51/58 (87%)
Frame = -3 / +2
Query: 1002 NMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLT 829
NMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYD TAETLT
Sbjct: 2 NMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDXXXXTAETLT 175
Score = 76.7 bits (161), Expect = 4e-013
Identities = 39/59 (66%), Positives = 42/59 (71%)
Frame = +2 / -1
Query: 827 MVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMF 1003
+V VSAV S*QL TPMGLTLPQ* S GC RGSP*TSLVLV + A A+PSMF
Sbjct: 177 IVRVSAVLXXXS*QLRTPMGLTLPQ*ASV*GCSRGSP*TSLVLVSKKRAPTRLASPSMF 1
Score = 59.7 bits (124), Expect = 5e-008
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 832 QRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHV 1002
Q F C I+ D+DGI+IAPVS LR+ +RI+I+ TGT +++ + L SEHV
Sbjct: 172 QSFXCXXTXIIATADSDGINIAPVSFSLRMFKRISINFTGTCKQKACPNTLGKSEHV 2
Score = 49.6 bits (102), Expect = 5e-005
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +3 / -2
Query: 831 STFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRAC 1001
S F L + H ++ RWD*HCPSK ED H+ HWY * + + +RAC
Sbjct: 173 SEFXLXSYXHHSNCGLRWD*HCPSKLQFEDVQEDLHKLHWYL*AKSVPQHAWQVRAC 3
Score = 41.4 bits (84), Expect = 0.016
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -2 / +1
Query: 1003 EHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQCQSHRCQELL 863
EHAR + + ++YQ* LW SS + LLGQC SHR +LL
Sbjct: 1 EHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC*SHRSPQLL 141
>gb|CD022511.1|CD022511 NXPV_058_E01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_058_E01 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 192
Score = 121 bits (258), Expect = 2e-026
Identities = 47/59 (79%), Positives = 50/59 (84%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 814
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYD KR A+TL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDXXKRVAKTLMFDYHR 177
Score = 68.9 bits (144), Expect = 9e-011
Identities = 35/51 (68%), Positives = 38/51 (74%)
Frame = +2 / -2
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
*S +NV A R SS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 170 *SNINVFATRFXSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILA 18
>gb|BG319008.1|BG319008 NXPV_022_E04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_022_E04 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 209
Score = 120 bits (256), Expect = 3e-026
Identities = 48/59 (81%), Positives = 50/59 (84%)
Frame = -3 / +1
Query: 990 LAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 814
LAKR+ AR LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDE KR A TL DYHR
Sbjct: 1 LAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDE*KRVA*TLMFDYHR 177
Score = 68.9 bits (144), Expect = 9e-011
Identities = 35/51 (68%), Positives = 38/51 (74%)
Frame = +2 / -1
Query: 821 *SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLA 973
*S +NV A R SS*QLLTP+GLTLPQ S CGC RGSP*TS V V + LA
Sbjct: 170 *SNINVYATRFHSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKILA 18
>gb|BE209359.1|BE209359 NXNV_166_G11_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_166_G11 5' similar to Arabidopsis thaliana sequence
At3g46440 dTDP-glucose 4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 312
Score = 119 bits (255), Expect = 4e-026
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWG NPIG SCYD KR
Sbjct: 128 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGXXNPIGXXSCYDXXKR 307
Score = 69.3 bits (145), Expect = 6e-011
Identities = 35/65 (53%), Positives = 40/65 (61%)
Frame = +2 / -1
Query: 848 RLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVL 1027
R SS*QL P+GL PQ S CGC RGSP*TS V V + LA A+P++F VP TLV
Sbjct: 306 RFXSS*QLXXPIGLXXPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVF 127
Query: 1028 CYHKG 1042
G
Sbjct: 126 IVFTG 112
Score = 45.1 bits (92), Expect = 0.001
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1 / -3
Query: 847 TLALIVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGL 1026
TL I+ ++ + P+ L L +L+R+TID G++ + L S+H+Q NH+ L
Sbjct: 307 TLXXIIATSXSNRVXXTPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSL 128
Query: 1027 VLSQRL 1044
R+
Sbjct: 127 YCLHRI 110
>gb|CO158653.1|CO158653 FLD1_8_G04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_G04_A029 3', mRNA sequence
Length = 635
Score = 118 bits (253), Expect = 8e-026
Identities = 45/72 (62%), Positives = 57/72 (79%)
Frame = -3 / +2
Query: 585 GNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREG 406
GNPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREG
Sbjct: 2 GNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREG 181
Query: 405 LPLMVSDFRKRI 370
LP M DFR R+
Sbjct: 182 LPRMAEDFRLRL 217
Score = 81.7 bits (172), Expect = 1e-014
Identities = 40/71 (56%), Positives = 46/71 (64%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 213 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 34
Query: 554 SSSMVNSPGLP 586
SS++VNSPG P
Sbjct: 33 SSNIVNSPGFP 1
>gb|DR118566.1|DR118566 RTMG1_17_G05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_G05_A029 5', mRNA sequence
Length = 479
Score = 118 bits (252), Expect = 1e-025
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = -3 / +2
Query: 714 ALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEF 568
ALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEF
Sbjct: 332 ALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 478
Score = 101 bits (216), Expect = 1e-020
Identities = 42/49 (85%), Positives = 42/49 (85%)
Frame = +2 / -3
Query: 569 NSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGSFLSA 715
NSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TVKGS A
Sbjct: 477 NSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA 331
Score = 56.5 bits (117), Expect = 5e-007
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +1 / -2
Query: 577 RVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQGLLPQCL 717
R+ ++EW +M A H+ H+ NQI N LETP L I+I+ Q LL Q L
Sbjct: 469 RIPKIEWTNMFALHKSHKAFNQIGNELETPSLFPISIDCQRLLAQSL 329
Score = 51.5 bits (106), Expect = 1e-005
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -2 / +1
Query: 727 LCCSGTEEGALDGLW*WKANQEFPICF*SG*GSDEADGRRACGAIQPG*PWRV 569
L C G +GA D LW W+ + EFP+ F SG* G R C +IQ W +
Sbjct: 319 LLCIGFAQGAFDSLWRWETDSEFPVRFRSG*RPYATYGGRTCWSIQSWESWGI 477
Score = 37.3 bits (75), Expect = 0.28
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3 / -1
Query: 591 *MAPHARLPSASSDPQPDQKHIGNSWFAFHHHKPSRAPSSVP 716
*M H R P + QPD+K GNS H H+ S+AP + P
Sbjct: 455 *MDQHVRPP*VA*GLQPDRKRTGNSESVSHLHRLSKAPCAKP 330
Score = 34.5 bits (69), Expect = 1.9
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -1 / +3
Query: 725 LLLRH*GRSP*RFMVMESKPGVSNMFLIWLRV**S*WKASMWGHS 591
++ R RS *+ M M ++ GVS+ F IWL+ W+A+M HS
Sbjct: 321 IMYRLCARSL*QSMEMGNRLGVSSSFPIWLKALCDLWRANMLVHS 455
>gb|CO168704.1|CO168704 NDL1_2_A02.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_2_A02_A029 3', mRNA sequence
Length = 430
Score = 116 bits (248), Expect = 4e-025
Identities = 44/71 (61%), Positives = 56/71 (78%)
Frame = -3 / +3
Query: 582 NPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGL 403
NPGEFTMLELA+ V++ I+ + +E +NT DDP KRKPDI++A F GWEPK+ LREGL
Sbjct: 3 NPGEFTMLELAEAVKELIETSTTVEMVENTPDDPRKRKPDITKATTFFGWEPKVTLREGL 182
Query: 402 PLMVSDFRKRI 370
PLM DFR+R+
Sbjct: 183 PLMAEDFRERL 215
Score = 71.2 bits (149), Expect = 2e-011
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS + G PSR+ GSHP+N +A +MSG L GSS VF S S+ S+T A
Sbjct: 211 RSRKSSAISGNPSRKVTLGSHPKNVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 32
Query: 554 SSSMVNSPG 580
SSS+VNSPG
Sbjct: 31 SSSIVNSPG 5
>gb|CD024484.1|CD024484 NXRV_043_D06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_043_D06 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 142
Score = 114 bits (243), Expect = 2e-024
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -3 / +1
Query: 942 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 808
VYGDPL+HPQ E YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA
Sbjct: 1 VYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 135
Score = 67.0 bits (140), Expect = 3e-010
Identities = 34/44 (77%), Positives = 35/44 (79%)
Frame = +2 / -3
Query: 809 APRW*SMVNVSAVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP* 940
AP *S+V VSAV LPSS*QL TPMGLTLPQ* S GC RGSP*
Sbjct: 134 APL**SIVRVSAVLLPSS*QLRTPMGLTLPQ*ASV*GCSRGSP* 3
Score = 60.2 bits (125), Expect = 4e-008
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +1 / -2
Query: 817 VVIHGQRFSCTLALIVTAPDTDGIDIAPVSLHLRVLERITID 942
V+IH Q F C+L LI+ D+DGI+IAPVS LR+ +RI+I+
Sbjct: 126 VIIHSQSFGCSLTLIIATADSDGINIAPVSFSLRMFKRISIN 1
Score = 47.3 bits (97), Expect = 3e-004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3 / -1
Query: 822 NPWSTFQLYACPHRNSS*HRWD*HCPSKSPPAGAGEDHHR 941
NP S F+L++ PH ++ RWD*HCPSK ED H+
Sbjct: 121 NP*SEFRLFSYPHHSNCGLRWD*HCPSKLQFEDVQEDLHK 2
Score = 38.6 bits (78), Expect = 0.11
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -2 / +3
Query: 940 LW*SSPAPAGGDLLGQCQSHRCQELLR*GQAYS*NVDHGL 821
LW SS + LLGQC SHR +LL *G S N D+GL
Sbjct: 3 LWRSS*TSSN*SLLGQC*SHRSPQLL**G*ENSRNSDYGL 122
Score = 37.7 bits (76), Expect = 0.20
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 938 MVILSSTRRWRLTGAMSIPSVSGAVTMRASVQLKR*PWITT 816
M IL + + +LTGAM IPS S MR Q K * WI T
Sbjct: 5 MEILLNILKLKLTGAMLIPSESAVAMMRVREQPKL*LWIIT 127
>gb|DR022458.1|DR022458 STRS1_51_E04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_51_E04_A034 3', mRNA sequence
Length = 774
Score = 113 bits (242), Expect = 3e-024
Identities = 43/59 (72%), Positives = 53/59 (89%)
Frame = -3 / +1
Query: 543 VQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIF 367
V++TID +ARIEF++NT DDPHKRKPDI++AK+ L WEP+I LREGLPLMV DFRKR+F
Sbjct: 1 VKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 177
Score = 65.2 bits (136), Expect = 1e-009
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = +2 / -2
Query: 368 KMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSW 541
K RLRKS T+ G PS + I GSH R S A ++SG L GSS VF NSI AL S+VS+
Sbjct: 176 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSF 3
>gb|BF777618.1|BF777618 NXSI_070_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_070_F01 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 442
Score = 112 bits (239), Expect = 7e-024
Identities = 44/56 (78%), Positives = 47/56 (83%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD 859
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ YWGNVNPIG YD
Sbjct: 274 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQXXEYWGNVNPIGXXXXYD 441
Score = 63.8 bits (133), Expect = 3e-009
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = +2 / -3
Query: 878 PMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
P+GLTLPQ CGC RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 422 PIGLTLPQYSXXCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 258
Score = 42.8 bits (87), Expect = 0.006
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1 / -2
Query: 859 IVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQ 1038
I+ ++ ++I P+ L +L+R+TID G++ + L S+H+Q NH+ L
Sbjct: 441 IIAXXXSNRVNITPIFXXLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLH 262
Query: 1039 RL 1044
R+
Sbjct: 261 RI 256
>gb|DR072662.1|DR072662 RTDK1_27_F10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_27_F10_A029 5', mRNA sequence
Length = 331
Score = 110 bits (235), Expect = 2e-023
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNP 883
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVYGDPL+HPQ E YWGNVNP
Sbjct: 188 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQTEAYWGNVNP 331
Score = 73.0 bits (153), Expect = 5e-012
Identities = 35/53 (66%), Positives = 38/53 (71%)
Frame = +2 / -2
Query: 884 GLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
GLTLPQ* S GC RGSP*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 330 GLTLPQ*ASV*GCSRGSP*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 172
Score = 47.8 bits (98), Expect = 2e-004
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +1 / -1
Query: 883 GIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHI 1020
GI+IAPVS LR+ +RI+I+ TGT +++ + L SEHVQ ++I
Sbjct: 331 GINIAPVSFSLRMFKRISINFTGTCKQKACPNTLGKSEHVQGSHNI 194
Score = 41.4 bits (84), Expect = 0.016
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3 / -3
Query: 885 D*HCPSKSPPAGAGEDHHRPHWYW*GGTWR*SSLLIRACSESQPH 1019
D*HCPSK ED H+ HWY * + + +RACS H
Sbjct: 329 D*HCPSKLQFEDVQEDLHKLHWYL*AKSVPQHAWQVRACSRFPQH 195
Score = 34.1 bits (68), Expect = 2.6
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -2 / +1
Query: 1027 QDQCGWDSEHARISKEDQRQVPPHQYQ*GLW*SSPAPAGGDLLGQC 890
Q+ C + EHAR + + ++YQ* LW SS + LLGQC
Sbjct: 187 QN*CCGNLEHARTCQACWGTLFAYKYQ*SLWRSS*TSSN*SLLGQC 324
>gb|BF010807.1|BF010807 NXCI_095_A03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_095_A03 5' similar to Arabidopsis
thaliana sequence At3g62830 dTDP-glucose 4-6-dehydratase
homolog D18 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 294
Score = 109 bits (232), Expect = 6e-023
Identities = 39/52 (75%), Positives = 48/52 (92%)
Frame = -3 / +1
Query: 513 IEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
IEFR NT+DDPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 1 IEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 156
Score = 62.5 bits (130), Expect = 7e-009
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2 / -2
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNS 511
SPK R RKS T+RGRP R GS P S A ++SG LCGSS VF NS
Sbjct: 152 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNS 3
>gb|BM427736.1|BM427736 NXRV_002_E07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_002_E07 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 257
Score = 108 bits (231), Expect = 9e-023
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = -3 / +1
Query: 621 LMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEF 442
LMEGE+ GP NLGNPGEFTMLELA+ V++ I+P+A ++ +NT +D +KPDI+ K
Sbjct: 1 LMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPNDSRMKKPDITXXKTL 180
Query: 441 LGWEPKIPLREGLPLMVSDFRKRI 370
GWE K LRE L M D R+
Sbjct: 181 PGWETKXXLRERLTRMAEDXXLRV 252
Score = 65.2 bits (136), Expect = 1e-009
Identities = 38/82 (46%), Positives = 44/82 (53%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R S +R SRR SHP +MSG + S VF A GSM S+T A
Sbjct: 248 RRXXSSAIRVSLSRRXXLVSHPGRVXXFVMSGFFIRESFGVFSVIFNSAEGSMSSFTASA 69
Query: 554 SSSMVNSPGLPRLNGPTCSPSI 619
SS++VNSPG PRL GP SPSI
Sbjct: 68 SSNIVNSPGFPRLIGPVFSPSI 3
>gb|BF186296.1|BF186296 NXCI_135_G02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_135_G02 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 335
Score = 108 bits (230), Expect = 1e-022
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD 859
KTNV+GTLNMLGLAKR+ AR LLTSTSE GDPL+HPQ YWG VNP G SCYD
Sbjct: 167 KTNVIGTLNMLGLAKRVGARILLTSTSEXXGDPLEHPQXXXYWGXVNPXGXXSCYD 334
Score = 62.5 bits (130), Expect = 7e-009
Identities = 31/61 (50%), Positives = 36/61 (59%)
Frame = +2 / -3
Query: 860 S*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHK 1039
S*QL P+GLT PQ CGC RGSP S V V + LA A+P++F VP TLV
Sbjct: 333 S*QLXXPIGLTXPQYXXFCGCSRGSPXXSDVEVNKILAPTRLASPNIFNVPITLVFIVFT 154
Query: 1040 G 1042
G
Sbjct: 153 G 151
Score = 35.4 bits (71), Expect = 1.0
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1 / -2
Query: 859 IVTAPDTDGIDIAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQ 1038
I+ + ++ P+ L +L+R+T G++ + L S+H+Q NH+ L
Sbjct: 334 IIATSXSXRVNXTPIXXXLWMLKRVTXXFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLH 155
Query: 1039 RL 1044
R+
Sbjct: 154 RI 149
>gb|BE049816.1|BE049816 NXNV_144_F06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_144_F06 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 385
Score = 107 bits (228), Expect = 2e-022
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = -3 / +3
Query: 573 EFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLM 394
EFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M
Sbjct: 3 EFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRM 182
Query: 393 VSDFRKRI 370
DFR R+
Sbjct: 183 AEDFRLRL 206
Score = 72.5 bits (152), Expect = 7e-012
Identities = 37/67 (55%), Positives = 43/67 (64%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 202 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 23
Query: 554 SSSMVNS 574
SS++VNS
Sbjct: 22 SSNIVNS 2
>gb|BQ702273.1|BQ702273 NXSI_126_H01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_126_H01 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 543
Score = 104 bits (221), Expect = 2e-021
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVR 871
KTNV TLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGN PIGVR
Sbjct: 387 KTNVXXTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGNXXPIGVR 542
Score = 60.2 bits (125), Expect = 4e-008
Identities = 30/57 (52%), Positives = 35/57 (61%)
Frame = +2 / -3
Query: 872 LTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
LTP+G LPQ S CGC RGSP*TS V V + LA A+P++F V TLV G
Sbjct: 541 LTPIGXXLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVXITLVFIVFTG 371
Score = 36.8 bits (74), Expect = 0.39
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1 / -2
Query: 892 IAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
I P+ L L +L+R+TID G++ + L S+H+Q H+ L R+
Sbjct: 521 ITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCXXHVSLYCLHRI 369
>gb|BM133194.1|BM133194 NXLV_001_D11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_001_D11 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 236
Score = 102 bits (218), Expect = 5e-021
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = -3 / +3
Query: 645 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKP 466
D+V+GL++LMEG++ GP NLGNP EFTMLELA+ V++ I+ + +E +NT DD KRKP
Sbjct: 18 DMVDGLIRLMEGDNTGPINLGNPXEFTMLELAEAVKELIETSTTVEMVENTPDDSRKRKP 197
Query: 465 DISRAKEFLGWEP 427
DI+ LG EP
Sbjct: 198 DITXXTTLLGXEP 236
Score = 71.2 bits (149), Expect = 2e-011
Identities = 38/73 (52%), Positives = 45/73 (61%)
Frame = +2 / -2
Query: 428 GSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 607
GSHP + + +MSG L SS VF S S+ S+T ASSS+VNS G PR GP
Sbjct: 235 GSHPXSVVXXVMSGFLLRESSGVFSTISTVVDVSISSFTASASSSIVNSXGFPRFIGPVL 56
Query: 608 SPSISFIRPSTRS 646
SPSIS I+PST S
Sbjct: 55 SPSISRIKPSTIS 17
>gb|BQ697709.1|BQ697709 NXPV_059_H07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_059_H07 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 214
Score = 100 bits (214), Expect = 2e-020
Identities = 41/70 (58%), Positives = 52/70 (74%)
Frame = -3 / +3
Query: 702 EPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDP 523
E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTML L + V+ P
Sbjct: 3 EELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLXLXEAVKXLXKP 182
Query: 522 NARIEFRKNT 493
+A ++ +NT
Sbjct: 183 SAELKMTENT 212
Score = 67.0 bits (140), Expect = 3e-010
Identities = 34/62 (54%), Positives = 36/62 (58%)
Frame = +2 / -1
Query: 518 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVK 697
A G M T ++VNSPG PRL GP SPSIS IRPST SET KL V P TV
Sbjct: 187 AEGXMSXXTASXXXNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 8
Query: 698 GS 703
S
Sbjct: 7 SS 2
Score = 35.0 bits (70), Expect = 1.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1 / -3
Query: 559 KHGELARVTQVEWPHMLAFHQLHQTLNQIRNILETPGLLSITINRQ 696
+H E + + ++ P +L FH+ +N +RN+ E GL + +++ Q
Sbjct: 146 QHCEFSWIPKINRPSILPFHKSD*AINHVRNVAEAAGLSARSLHCQ 9
>gb|AI920246.1|AI920246 1776 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
g12_PL21NCSU, mRNA sequence
Length = 625
Score = 68.9 bits (144), Expect(3) = 1e-019
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPL 925
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGD L
Sbjct: 288 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDLL 389
Score = 41.8 bits (85), Expect(3) = 1e-019
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 930 PLQHPQVETYWGNVNPIG 877
PL+HPQ E YWGNVNP G
Sbjct: 383 PLEHPQKEEYWGNVNPNG 436
Score = 35.4 bits (71), Expect(2) = 2e-005
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / -2
Query: 872 LTPMGLTLPQ*VSTCGCWRG 931
L P+GLTLPQ S CGC RG
Sbjct: 441 LLPLGLTLPQYSSFCGCSRG 382
Score = 34.1 bits (68), Expect(2) = 2e-005
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 932 SP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
SP*TS V V + LA A+P++F VP TLV G
Sbjct: 382 SP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 272
Score = 24.4 bits (47), Expect(3) = 1e-019
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 882 IGVRSCYDEGK 850
+GVR+CYDE K
Sbjct: 432 MGVRNCYDERK 464
>gb|BQ701694.1|BQ701694 NXSI_118_E04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_118_E04 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 547
Score = 98.2 bits (208), Expect = 1e-019
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGN 892
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ E YWGN
Sbjct: 411 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQKEEYWGN 545
Score = 56.5 bits (117), Expect = 5e-007
Identities = 28/51 (54%), Positives = 32/51 (62%)
Frame = +2 / -1
Query: 890 TLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
TLPQ S CGC RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 547 TLPQYSSFCGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 395
Score = 40.5 bits (82), Expect = 0.030
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1 / -3
Query: 892 IAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
I P+ L L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 545 ITPIFLLLWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 393
>gb|BF010728.1|BF010728 NXCI_066_G06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_066_G06 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 402
Score = 97.7 bits (207), Expect = 2e-019
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = -3 / +1
Query: 561 LELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDF 382
LELA+ V++ I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DF
Sbjct: 1 LELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDF 180
Query: 381 RKRI 370
R R+
Sbjct: 181 RLRL 192
Score = 65.2 bits (136), Expect = 1e-009
Identities = 34/62 (54%), Positives = 38/62 (61%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLA 553
R RKS +RGRPSRR GSHPR A +MSG + GSS VF A GSM S+T A
Sbjct: 188 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 9
Query: 554 SS 559
SS
Sbjct: 8 SS 3
>gb|BX254121.1|BX254121 BX254121 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP093G01 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 574
Score = 95.0 bits (201), Expect = 1e-018
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGN 892
KTNV+GTLNMLGLAKR+ AR +TSTSEVYGDPL+HPQ E YWGN
Sbjct: 438 KTNVIGTLNMLGLAKRVGARIFVTSTSEVYGDPLEHPQKEEYWGN 572
Score = 54.2 bits (112), Expect = 2e-006
Identities = 27/51 (52%), Positives = 31/51 (60%)
Frame = +2 / -1
Query: 890 TLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
TLPQ S CGC RGSP*TS V V + LA A+P++F VP T V G
Sbjct: 574 TLPQYSSFCGCSRGSP*TSDVEVTKILAPTRLASPNIFNVPITFVFIVFTG 422
Score = 35.4 bits (71), Expect = 1.0
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1 / -3
Query: 892 IAPVSLHLRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
I P+ L L +L+R+TID G + + L +H+Q NH+ L R+
Sbjct: 572 ITPIFLLLWMLKRVTIDFRC*GHKNSCTNSLGKPQHIQCANHVCLYCLHRI 420
>gb|CD020793.1|CD020793 NXNV_089_E09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_089_E09 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 191
Score = 95.0 bits (201), Expect = 1e-018
Identities = 37/61 (60%), Positives = 48/61 (78%)
Frame = -3 / +2
Query: 663 SFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRKNTQDD 484
SF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA+ V I+P+A ++ + DD
Sbjct: 2 SFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVXXLIEPSAELKMTEXXPDD 181
Query: 483 P 481
P
Sbjct: 182 P 184
Score = 70.3 bits (147), Expect = 3e-011
Identities = 33/49 (67%), Positives = 36/49 (73%)
Frame = +2 / -3
Query: 518 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKL 664
A GSM +T ASS++VNSPG PRL GP SPSIS IRPST SET KL
Sbjct: 147 AEGSMSXFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKL 1
>gb|CD021482.1|CD021482 NXNV_145_G07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_145_G07 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 130
Score = 91.8 bits (194), Expect = 1e-017
Identities = 35/41 (85%), Positives = 36/41 (87%)
Frame = -3 / +3
Query: 969 RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 847
R LLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYD KR
Sbjct: 3 RILLTSTSEVYGDPLEHPQKEEYWGNVNPIGVRSCYDXXKR 125
Score = 60.6 bits (126), Expect = 3e-008
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +2 / -1
Query: 842 AVRLPSS*QLLTPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNL 970
A R SS*QLLTP+GLTLPQ S CGC RGSP*TS V V + L
Sbjct: 130 ATRFXSS*QLLTPIGLTLPQYSSFCGCSRGSP*TSDVEVNKIL 2
>gb|DR118485.1|DR118485 RTMG1_17_G05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_G05_A029 3', mRNA sequence
Length = 504
Score = 91.8 bits (194), Expect = 1e-017
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = -3 / +3
Query: 486 DPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
DPHKRKPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 3 DPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 131
Score = 55.6 bits (115), Expect = 9e-007
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = +2 / -3
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGS 487
SPK R RKS T+RGRP R GS P S A ++SG LCGS
Sbjct: 127 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGS 2
>gb|AW758854.1|AW758854 NXNV_091_G02_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_091_G02 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 330
Score = 86.8 bits (183), Expect = 4e-016
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = -3 / +1
Query: 531 IDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
I+P+A ++ +NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 1 IEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 162
Score = 56.1 bits (116), Expect = 6e-007
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSRR GSHPR A +MSG + GSS VF
Sbjct: 158 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 33
>gb|BQ699876.1|BQ699876 NXRV122_G05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV122_G05 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 500
Score = 86.3 bits (182), Expect = 5e-016
Identities = 30/42 (71%), Positives = 38/42 (90%)
Frame = -3 / +1
Query: 483 PHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
PHK KPDI++AK+ LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 1 PHKXKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 126
Score = 51.0 bits (105), Expect = 2e-005
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +2 / -1
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLC 481
SPK R RKS T+RGRP R GS P S A ++SG LC
Sbjct: 122 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGXXLC 3
>gb|BG040768.1|BG040768 NXSI_114_H01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_114_H01 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 533
Score = 83.5 bits (176), Expect = 3e-015
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQ 913
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HPQ
Sbjct: 411 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQ 524
Score = 48.7 bits (100), Expect = 1e-004
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = +2 / -2
Query: 914 CGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
CGC RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 523 CGCSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 395
Score = 34.5 bits (69), Expect = 1.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1 / -1
Query: 913 LRVLERITIDLTGTGEEEPGVDPLC*SEHVQSPNHIGLVLSQRL 1044
L +L+R+TID G++ + L S+H+Q NH+ L R+
Sbjct: 524 LWMLKRVTIDFRC*GQQNSCTNSLGKSQHIQCANHVSLYCLHRI 393
>gb|DR181538.1|DR181538 RTMNUT1_39_B09.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_39_B09_A029 5', mRNA sequence
Length = 761
Score = 81.3 bits (171), Expect = 2e-014
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHP 916
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL+HP
Sbjct: 651 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHP 761
Score = 46.4 bits (95), Expect = 5e-004
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +2 / -2
Query: 917 GCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLV 1024
GC RGSP TS V V R LA L A+P+MF VP TLV
Sbjct: 760 GCSRGSPYTSDVDVSRILAPTLLASPNMFNVPITLV 653
>gb|DR094871.1|DR094871 STRR1_17_G07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_G07_A033 3', mRNA sequence
Length = 577
Score = 80.3 bits (169), Expect = 3e-014
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -3 / +1
Query: 525 PNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
P A ++ +NT DDP RKPDI++AK GWEPK+ LREGLP M DFR R+
Sbjct: 1 PFAELKMTENTPDDPRMRKPDITKAKTLFGWEPKVSLREGLPRMAEDFRLRL 156
Score = 53.3 bits (110), Expect = 4e-006
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSR+ GSHP+ A +MSG + GSS VF
Sbjct: 152 RRRKSSAIRGRPSRKETLGSHPKRVFAFVMSGFLIRGSSGVF 27
>gb|DR094880.1|DR094880 STRR1_17_H07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_H07_A033 3', mRNA sequence
Length = 577
Score = 80.3 bits (169), Expect = 3e-014
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -3 / +1
Query: 525 PNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
P A ++ +NT DDP RKPDI++AK GWEPK+ LREGLP M DFR R+
Sbjct: 1 PFAELKMTENTPDDPRMRKPDITKAKTLFGWEPKVSLREGLPRMAEDFRLRL 156
Score = 53.3 bits (110), Expect = 4e-006
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSR+ GSHP+ A +MSG + GSS VF
Sbjct: 152 RRRKSSAIRGRPSRKETLGSHPKRVFAFVMSGFLIRGSSGVF 27
>gb|DR094870.1|DR094870 STRR1_17_G06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_G06_A033 3', mRNA sequence
Length = 529
Score = 79.9 bits (168), Expect = 4e-014
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = -3 / +3
Query: 519 ARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
A ++ +NT DDP RKPDI++AK GWEPK+ LREGLP M DFR+R+
Sbjct: 6 AELKMTENTPDDPRMRKPDITKAKTLFGWEPKVSLREGLPRMAEDFRQRL 155
Score = 49.6 bits (102), Expect = 5e-005
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSR+ GS P+ A +MSG + GSS VF
Sbjct: 151 RWRKSSAIRGRPSRKETLGSQPKRVFAFVMSGFLIRGSSGVF 26
>gb|CD020689.1|CD020689 NXNV_084_E01_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_084_E01 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 182
Score = 79.0 bits (166), Expect = 8e-014
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -3 / +3
Query: 555 LAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFR 379
LA+ V++ I+P+A ++ +NT DP R DI++AK LGWEPK+ REGLP M DFR
Sbjct: 3 LAEAVKELIEPSAELKMTENTSHDPRMRXXDITKAKTLLGWEPKVXXREGLPRMAEDFR 179
Score = 53.3 bits (110), Expect = 4e-006
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2 / -2
Query: 380 RKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLAS 556
RKS +RGRPSR GSHPR A +MS + GS VF A GSM S+T AS
Sbjct: 178 RKSSAIRGRPSRXXTLGSHPRRVFAFVMSXXLIRGSCEVFSVIFNSAEGSMSSFTASAS 2
>gb|BE996955.1|BE996955 NXCI_093_B09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_093_B09 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 310
Score = 77.1 bits (162), Expect = 3e-013
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -3 / +3
Query: 498 NTQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
NT DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 3 NTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 131
Score = 56.1 bits (116), Expect = 6e-007
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWVF 499
R RKS +RGRPSRR GSHPR A +MSG + GSS VF
Sbjct: 127 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 2
>gb|AW888016.1|AW888016 NXNV_105_H05_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_105_H05 5' similar to Arabidopsis thaliana sequence
At3g62830 dTDP-glucose 4-6-dehydratase homolog D18 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 415
Score = 76.7 bits (161), Expect = 4e-013
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWG 895
KTNVVGTLNMLGLAKR+ ARFLLTSTSEVY D + YWG
Sbjct: 281 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYXDXXEXXXTXAYWG 412
Score = 50.1 bits (103), Expect = 4e-005
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +2 / -2
Query: 896 PQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
PQ* C S *TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 411 PQ*AXVXXCSXXSX*TSLVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 265
>gb|CD026231.1|CD026231 NXSI_124_E09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_124_E09 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 152
Score = 76.2 bits (160), Expect = 5e-013
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = -3 / +1
Query: 582 NPGEFTMLELAKVVQDTIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGW 433
NPGEFTMLELA+ V++ I+P+A ++ +NT DDP RKPDI++AK W
Sbjct: 1 NPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLXXW 150
Score = 45.1 bits (92), Expect = 0.001
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / -1
Query: 431 SHPRNSLARLMSGLRLCGSSWVFLRNSIRALGSMVSWTTLASSSMVNSPG 580
SH A +MSG + GSS VF A GSM S+T ASS++VNSPG
Sbjct: 152 SHXXRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPG 3
>gb|BM428535.1|BM428535 NXRV_018_B04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_018_B04 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 556
Score = 75.8 bits (159), Expect = 7e-013
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHP 916
KTNV+GTLNMLGLAKR+ AR LLTSTSEVYGDPL P
Sbjct: 436 KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLXXP 546
Score = 39.6 bits (80), Expect = 0.058
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +2 / -3
Query: 917 GCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
G RGSP*TS V V + LA A+P++F VP TLV G
Sbjct: 545 GXSRGSP*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 420
>gb|DT636892.1|DT636892 EST1151823 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGX25 3' end, mRNA sequence
Length = 300
Score = 75.3 bits (158), Expect = 1e-012
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPL 925
KTNVVGTLNMLGLAKR+ ARFLLTST+EVYGDPL
Sbjct: 199 KTNVVGTLNMLGLAKRVGARFLLTSTTEVYGDPL 300
Score = 51.5 bits (106), Expect = 1e-005
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +2 / -2
Query: 926 RGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
RGSP*TS+VLV + A A+PSMF+VPTTLVL G
Sbjct: 299 RGSP*TSVVLVSKKRAPTRLASPSMFKVPTTLVLIVFTG 183
>gb|BE209218.1|BE209218 NXNV_147_E01_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_147_E01 5' similar to Arabidopsis thaliana sequence
At2g28760 putative nucleotide-sugar dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 580
Score = 74.8 bits (157), Expect = 1e-012
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIG 877
KTNV+GTLNMLGLA R+ AR L TSTSEVYGD L+ Q NV PIG
Sbjct: 429 KTNVIGTLNMLGLAXRVGARILXTSTSEVYGDXLEXXQKXXXLXNVXPIG 578
Score = 46.4 bits (95), Expect = 5e-004
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +2 / -1
Query: 875 TPMGLTLPQ*VSTCGCWRGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
TP+G TL S C R SP*TS V V + LA A+P++F VP TLV G
Sbjct: 580 TPIGXTLXNXXSFCXXSRXSP*TSDVEVXKILAPTRXASPNIFNVPITLVFIVFTG 413
>gb|DR094963.1|DR094963 STRR1_17_H07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_H07_A033 5', mRNA sequence
Length = 575
Score = 74.4 bits (156), Expect = 2e-012
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = -3 / +1
Query: 495 TQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
T DDP RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 1 TPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 126
Score = 52.4 bits (108), Expect = 8e-006
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSS 490
R RKS +RGRPSRR GSHPR A +MSG + GSS
Sbjct: 122 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSS 6
>gb|BQ654528.1|BQ654528 NXRV081_D12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV081_D12 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 480
Score = 68.4 bits (143), Expect = 1e-010
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPL 925
KTNV+GTLNMLGLAKR+ AR LLTSTS YGDPL
Sbjct: 378 KTNVIGTLNMLGLAKRVGARILLTSTSXXYGDPL 479
Score = 36.8 bits (74), Expect = 0.39
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2 / -3
Query: 926 RGSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
RGSP* S V V + LA A+P++F VP TLV G
Sbjct: 478 RGSP*XSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 362
>gb|CO167466.1|CO167466 FLD1_69_D02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_69_D02_A029 3', mRNA sequence
Length = 702
Score = 68.0 bits (142), Expect = 2e-010
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -3 / +3
Query: 477 KRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
KRKPDI++A LGWEPK+ LREGLPLM DFR+R+
Sbjct: 381 KRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 488
Score = 41.8 bits (85), Expect = 0.012
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRL 478
R RKS + G PSR+ GSHPR+ +A +MSG L
Sbjct: 484 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLL 380
>gb|BQ291019.1|BQ291019 NXRV054_F03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV054_F03 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 533
Score = 67.0 bits (140), Expect = 3e-010
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -3 / +2
Query: 483 PHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
P RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 2 PRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 115
Score = 48.7 bits (100), Expect = 1e-004
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCG 484
R RKS +RGRPSRR GSHPR A +MSG + G
Sbjct: 111 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRG 1
>gb|DR094952.1|DR094952 STRR1_17_G07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_G07_A033 5', mRNA sequence
Length = 587
Score = 66.6 bits (139), Expect = 4e-010
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = -3 / +1
Query: 495 TQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
T DDP RK DI++AK LGWEP + LREGLP M DFR R+
Sbjct: 13 TPDDPRMRKLDITKAKTLLGWEPLVSLREGLPRMAEDFRLRL 138
Score = 49.2 bits (101), Expect = 7e-005
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWV 496
R RKS +RGRPSRR GSHPR A +MS + GSS V
Sbjct: 134 RRRKSSAIRGRPSRRETKGSHPRRVFAFVMSSFLIRGSSGV 12
>gb|BG040272.1|BG040272 NXSI_110_E01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_110_E01 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 578
Score = 65.7 bits (137), Expect = 8e-010
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVYGDP 928
KTNV+GTLNMLGLAKR+ AR LLTSTS VY DP
Sbjct: 479 KTNVIGTLNMLGLAKRVGARILLTSTSXVYXDP 577
Score = 32.7 bits (65), Expect = 6.7
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2 / -3
Query: 929 GSP*TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
GS *TS V V + LA A+P++F VP TLV G
Sbjct: 576 GSX*TSDVEVNKILAPTRLASPNIFNVPITLVFIVFTG 463
>gb|DR094951.1|DR094951 STRR1_17_G06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_G06_A033 5', mRNA sequence
Length = 577
Score = 64.8 bits (135), Expect = 1e-009
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -3 / +2
Query: 495 TQDDPHKRKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
T DDP R DI++AK LGWEP + LREGLP M DFR R+
Sbjct: 2 TPDDPRMRNLDITKAKTLLGWEPMVSLREGLPRMAEDFRLRL 127
Score = 49.6 bits (102), Expect = 5e-005
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSGLRLCGSSWV 496
R RKS +RGRPSRR GSHPR A +MS + GSS V
Sbjct: 123 RRRKSSAIRGRPSRRETMGSHPRRVFAFVMSRFLIRGSSGV 1
>gb|BF169514.1|BF169514 NXCI_120_E10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_120_E10 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 344
Score = 64.3 bits (134), Expect = 2e-009
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -3 / +1
Query: 474 RKPDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
RKPDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 1 RKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 105
Score = 47.3 bits (97), Expect = 3e-004
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMSG 469
R RKS +RGRPSRR GSHPR A +MSG
Sbjct: 101 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSG 6
>gb|CD024098.1|CD024098 NXRV_031_H11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_031_H11 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 175
Score = 63.4 bits (132), Expect = 4e-009
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -3 / +2
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSEVY 937
KTNVVGTLNMLGLAK + ARFLLTSTSEVY
Sbjct: 80 KTNVVGTLNMLGLAKXVGARFLLTSTSEVY 169
Score = 43.2 bits (88), Expect = 0.005
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 938 *TSLVLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
*TSLVLV + A A+PSMF+VPTTLVL G
Sbjct: 168 *TSLVLVSKKRAPTXLASPSMFKVPTTLVLIVFTG 64
>gb|BQ655025.1|BQ655025 NXRV089_C08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV089_C08 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 254
Score = 62.5 bits (130), Expect = 7e-009
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = -3 / +2
Query: 450 KEFLGWEPKIPLREGLPLMVSDFRKRIFGDQ 358
K LGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 2 KXXLGWEPKVSLRKGLPLMVEDFRRRVFGDE 94
Score = 38.2 bits (77), Expect = 0.15
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / -3
Query: 362 SPKMRLRKSETMRGRPSRRGIFGSHP 439
SPK R RKS T+RGRP R GS P
Sbjct: 90 SPKTRRRKSSTIRGRPFLRDTLGSQP 13
>gb|CD017252.1|CD017252 NXCI_104_A04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_104_A04 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 150
Score = 62.5 bits (130), Expect = 7e-009
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -3 / +2
Query: 708 RKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
R E LTV G TRSF YVSD+V+GL+KLMEG GP N GN
Sbjct: 20 RGEELTVQAPGTXTRSFCYVSDMVDGLIKLMEGXXTGPINPGN 148
Score = 47.3 bits (97), Expect = 3e-004
Identities = 24/42 (57%), Positives = 24/42 (57%)
Frame = +2 / -1
Query: 578 GLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVKGS 703
G P L GP PSIS IRPST SET KL V P TV S
Sbjct: 150 GFPGLIGPVXXPSISLIRPSTMSET*QKLRVXVPGACTVSSS 25
>gb|BX678888.1|BX678888 BX678888 RS Pinus pinaster cDNA clone RS16E11, mRNA sequence
Length = 507
Score = 52.4 bits (108), Expect(2) = 1e-008
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +2
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 203 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 352
Score = 27.6 bits (54), Expect(2) = 1e-008
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3 / +2
Query: 867 CYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGP 763
C GK + H+G + RI R N YGP
Sbjct: 17 CIWLGKACHRRIVQTLHQGLWYKCRIGRFHNIYGP 121
>gb|BX250848.1|BX250848 BX250848 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP042B01 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 552
Score = 59.7 bits (124), Expect = 5e-008
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -3 / +1
Query: 468 PDISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
PDI++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 1 PDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 99
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLMS 466
R RKS +RGRPSRR GSHPR A +MS
Sbjct: 95 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMS 3
>gb|CD024673.1|CD024673 NXRV075_G01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV075_G01 5', mRNA sequence
Length = 162
Score = 41.8 bits (85), Expect(3) = 7e-008
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -3 / +1
Query: 783 IFNTYGPRMCIDDGRVVSNFVAQAL 709
I TYG RM IDDGRVVSNF+ L
Sbjct: 88 IXXTYGSRMTIDDGRVVSNFIVHPL 162
Score = 34.1 bits (68), Expect = 2.6
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 725 KLLTTRPSSMHMRGPYVLKI 784
KLLTTRPSSM MR P V KI
Sbjct: 146 KLLTTRPSSMVMREP*VXKI 87
Score = 31.8 bits (63), Expect(3) = 7e-008
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 852 KRTAETLTMDYHRGANLEVRIARIF 778
KR AETL DYHR L + IA F
Sbjct: 18 KRVAETLMFDYHRQHGLXIXIAPNF 92
Score = 19.9 bits (37), Expect(3) = 7e-008
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / +1
Query: 870 SCYDEG 853
SCYDEG
Sbjct: 1 SCYDEG 18
>gb|BX252076.1|BX252076 BX252076 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP059D05 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 490
Score = 56.1 bits (116), Expect = 6e-007
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = -3 / -1
Query: 441 LGWEPKIPLREGLPLMVSDFRKRIFGD 361
LGWEPK+ LR+G PLMV DFR+R+FG+
Sbjct: 490 LGWEPKVSLRKGFPLMVEDFRRRVFGN 410
Score = 35.0 bits (70), Expect = 1.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +3
Query: 365 PKMRLRKSETMRGRPSRRGIFGSHP 439
PK R RKS T+RG+P R GS P
Sbjct: 414 PKTRRRKSSTIRGKPFLRDTLGSQP 488
>gb|BF609214.1|BF609214 NXSI_041_F09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_041_F09 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 499
Score = 55.6 bits (115), Expect = 9e-007
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTS 946
KTNV+GTLNMLGLAKR+ AR LLTSTS
Sbjct: 405 KTNVIGTLNMLGLAKRVGARILLTSTS 485
>gb|CR393930.1|CR393930 CR393930 RN Pinus pinaster cDNA clone RN67H01, mRNA sequence
Length = 102
Score = 54.7 bits (113), Expect = 2e-006
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = -3 / +2
Query: 600 GPFNLGNPGEFTMLELAKVVQDTI 529
GPFNLGNPGEFTMLELA+VV++TI
Sbjct: 29 GPFNLGNPGEFTMLELAQVVKETI 100
Score = 45.5 bits (93), Expect(2) = 7e-005
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2 / -1
Query: 527 SMVSWTTLASSSMVNSPGLPRLNGP 601
S+VS+TT ASS++VNSPG PRL GP
Sbjct: 102 SIVSFTTCASSNIVNSPGFPRLKGP 28
Score = 20.3 bits (38), Expect(2) = 7e-005
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / -1
Query: 605 CSPSISFIR 631
CSPSIS IR
Sbjct: 27 CSPSISRIR 1
>gb|CF396258.1|CF396258 RTDS2_21_H11.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_21_H11_A021 3', mRNA sequence
Length = 582
Score = 54.2 bits (112), Expect = 2e-006
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -3 / +3
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDGKQTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 36 MWGDGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 185
>gb|CX650109.1|CX650109 COLD1_43_C05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_C05_A029 5', mRNA sequence
Length = 523
Score = 54.2 bits (112), Expect = 2e-006
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -3 / +1
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDGKQTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 220 MWGDGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 369
>gb|DR016346.1|DR016346 STRS1_9_C03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_9_C03_A034 5', mRNA sequence
Length = 834
Score = 54.2 bits (112), Expect = 2e-006
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -3 / +1
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDGKQTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 682 MWGDGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 831
>gb|DR089749.1|DR089749 RTAL1_10_C07.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_C07_A029 5', mRNA sequence
Length = 593
Score = 54.2 bits (112), Expect = 2e-006
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -3 / +3
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDGKQTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 213 MWGDGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 362
>gb|DR093049.1|DR093049 STRR1_5_E08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_E08_A033 5', mRNA sequence
Length = 811
Score = 54.2 bits (112), Expect = 2e-006
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -3 / +1
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDGKQTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 94 MWGDGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 243
>gb|BM903500.1|BM903500 NXRV_044_H08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_044_H08 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 294
Score = 53.8 bits (111), Expect = 3e-006
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -3 / +3
Query: 462 ISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
I++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 3 ITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 95
Score = 42.8 bits (87), Expect = 0.006
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLM 463
R RKS +RGRPSRR GSHPR A +M
Sbjct: 91 RRRKSSAIRGRPSRRETLGSHPRRVFAFVM 2
>gb|CD024099.1|CD024099 NXRV_031_H12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_031_H12 5' similar to Arabidopsis thaliana
sequence At3g53520 UDP-glucuronic acid decarboxylase
(UXS1) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 156
Score = 52.8 bits (109), Expect = 6e-006
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTST 949
KTNVVGTLNMLGLAKR+ ARFL T T
Sbjct: 79 KTNVVGTLNMLGLAKRVGARFLXTXT 156
Score = 34.1 bits (68), Expect = 2.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2 / -2
Query: 950 VLVRRNLALILFANPSMFRVPTTLVLCYHKG 1042
V V + A A+PSMF+VPTTLVL G
Sbjct: 155 VXVXKKRAPTRLASPSMFKVPTTLVLIVFTG 63
>gb|BQ700834.1|BQ700834 NXRV112_A09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV112_A09 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 566
Score = 52.4 bits (108), Expect = 8e-006
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3 / +3
Query: 462 ISRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
I+ AK LGWEPK+ LREGLP M DFR R+
Sbjct: 3 ITXAKTLLGWEPKVSLREGLPRMAEDFRLRL 95
Score = 43.7 bits (89), Expect = 0.003
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2 / -2
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLARLM 463
R RKS +RGRPSRR GSHPR A +M
Sbjct: 91 RRRKSSAIRGRPSRRETLGSHPRRVFAXVM 2
>gb|CO367960.1|CO367960 RTK1_37_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_37_F07_A029 5', mRNA sequence
Length = 834
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +3
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 318 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 467
>gb|DR017141.1|DR017141 STRS1_14_G04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_14_G04_A034 3', mRNA sequence
Length = 827
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +1
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 133 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 282
>gb|DR017219.1|DR017219 STRS1_14_G04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_14_G04_A034 5', mRNA sequence
Length = 697
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +3
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 261 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 410
>gb|DR070226.1|DR070226 RTDK1_12_C02.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_C02_A029 3', mRNA sequence
Length = 857
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +3
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 129 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 278
>gb|DR079287.1|DR079287 RTFEPL1_10_G04.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_10_G04_A029 3', mRNA sequence
Length = 900
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +1
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 190 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 339
>gb|DR096175.1|DR096175 STRR1_26_F12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_F12_A033 3', mRNA sequence
Length = 723
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +1
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 13 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 162
>gb|DR097206.1|DR097206 STRR1_33_F04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_F04_A033 3', mRNA sequence
Length = 785
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +2
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 71 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 220
>gb|DR160115.1|DR160115 RTFE1_3_G06.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_3_G06_A029 5', mRNA sequence
Length = 705
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / -1
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 702 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 553
>gb|DR692121.1|DR692121 EST1082208 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADI27 3' end, mRNA sequence
Length = 741
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +2
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 29 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 178
>gb|DR693952.1|DR693952 EST1084042 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE626 3' end, mRNA sequence
Length = 683
Score = 52.4 bits (108), Expect = 8e-006
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = -3 / +3
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
++GDG+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 471 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 620
>gb|BE123611.1|BE123611 NXNV_146_D02_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_146_D02 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 201
Score = 51.5 bits (106), Expect = 1e-005
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / +3
Query: 456 RAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+AK LGWEPK+ LREGLP M DFR R+
Sbjct: 3 KAKTLLGWEPKVSLREGLPRMAEDFRLRL 89
Score = 41.4 bits (84), Expect = 0.016
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLA 454
R RKS +RGRPSRR GSHPR A
Sbjct: 85 RRRKSSAIRGRPSRRETLGSHPRRVFA 5
>gb|BF777292.1|BF777292 NXSI_067_D10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_067_D10 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 441
Score = 51.0 bits (105), Expect = 2e-005
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLT 955
KTNVVGTLNMLGLAKR+ RFLLT
Sbjct: 363 KTNVVGTLNMLGLAKRVGXRFLLT 434
Score = 32.2 bits (64), Expect = 9.3
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / -3
Query: 986 ANPSMFRVPTTLVLCYHKG 1042
A+PSMF+VPTTLVL G
Sbjct: 403 ASPSMFKVPTTLVLIVFTG 347
>gb|BM903119.1|BM903119 NXLV_079_G10_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_079_G10 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 571
Score = 51.0 bits (105), Expect = 2e-005
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -3 / +3
Query: 459 SRAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
++AK LGWEPK+ LREGLP M DFR R+
Sbjct: 54 TKAKTLLGWEPKVSLREGLPRMAVDFRLRL 143
Score = 40.9 bits (83), Expect = 0.022
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2 / -1
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLA 454
R RKS +RGRPSRR GSHPR A
Sbjct: 139 RRRKSTAIRGRPSRRETLGSHPRRVFA 59
>gb|CD023272.1|CD023272 NXPV_107_E12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_107_E12 5' similar to Arabidopsis
thaliana sequence At5g28840 epimerase/dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 135
Score = 49.2 bits (101), Expect = 7e-005
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = -3 / +2
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
++GDGKQTRSF ++ + VEG+++L + + P N+G+
Sbjct: 14 MWGDGKQTRSFTFIDECVEGVLRLTKSDFTEPXNIGS 124
>gb|BF517974.1|BF517974 NXSI_032_D03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_032_D03 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 477
Score = 46.9 bits (96), Expect = 4e-004
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLT 955
KTNV+GTLNMLGLAK + AR LLT
Sbjct: 405 KTNVIGTLNMLGLAKXVGARILLT 476
>gb|BG039073.1|BG039073 NXSI_092_D07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_092_D07 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 475
Score = 46.0 bits (94), Expect = 7e-004
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTSE 943
KTNV+GTLNMLG AK AR LL S SE
Sbjct: 391 KTNVIGTLNMLGXAKXXGARXLLXSXSE 474
>gb|DR097291.1|DR097291 STRR1_33_F04.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_F04_A033 5', mRNA sequence
Length = 857
Score = 46.0 bits (94), Expect = 7e-004
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = -3 / +2
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
++GDG+QTRSF ++ + VEG+++L + + P N+G+
Sbjct: 725 MWGDGEQTRSFTFIDECVEGVLRLTKSDFREPVNIGS 835
>gb|BQ702592.1|BQ702592 NXSI_130_C11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_130_C11 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 467
Score = 45.1 bits (92), Expect = 0.001
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINARFLLTSTS 946
KTNV+GTLNMLGLAKR+ A L S S
Sbjct: 387 KTNVIGTLNMLGLAKRVXAXXLXXSXS 467
>gb|CO364510.1|CO364510 RTK1_16_D05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_16_D05_A029 3', mRNA sequence
Length = 903
Score = 44.6 bits (91), Expect = 0.002
Identities = 17/45 (37%), Positives = 31/45 (68%)
Frame = -3 / +1
Query: 675 KQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
KQTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 1 KQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 135
>gb|CX714089.1|CX714089 RTPQ1_17_D01.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_17_D01_A032 5', mRNA sequence
Length = 422
Score = 44.6 bits (91), Expect = 0.002
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 580
++GDGKQT SF ++ + VEG+++L + + P N+G+
Sbjct: 300 MWGDGKQTLSFTFIDECVEGVLRLTKSDFREPVNIGS 410
>gb|CD021259.1|CD021259 NXNV_130_D09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_130_D09 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 108
Score = 43.7 bits (89), Expect = 0.003
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -3 / +3
Query: 456 RAKEFLGWEPKIPLREGLPLMVSDFRKRI 370
+AK LGWEP LREGLP M FR R+
Sbjct: 3 KAKTLLGWEPXXSLREGLPRMAEHFRLRL 89
Score = 39.1 bits (79), Expect = 0.079
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / -3
Query: 374 RLRKSETMRGRPSRRGIFGSHPRNSLA 454
R RK +RGRPSRR GSHPR A
Sbjct: 85 RRRKCSAIRGRPSRREXLGSHPRRVFA 5
>gb|CF664217.1|CF664217 RTCNT1_8_E10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_8_E10_A029 3', mRNA sequence
Length = 682
Score = 42.8 bits (87), Expect = 0.006
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = -3 / +2
Query: 675 KQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
+QTRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 2 EQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 136
>gb|BX254580.1|BX254580 BX254580 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP100F07 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 680
Score = 41.4 bits (84), Expect = 0.016
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3 / +3
Query: 1026 KTNVVGTLNMLGLAKRINA 970
KTNV+GTLNMLGLAKR+ A
Sbjct: 624 KTNVIGTLNMLGLAKRVGA 680
>gb|CD020043.1|CD020043 NXNV019B09 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV019B09 5' similar to Arabidopsis thaliana sequence
At3g46440 dTDP-glucose 4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 141
Score = 41.4 bits (84), Expect = 0.016
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3 / +1
Query: 1026 KTNVVGTLNMLGLAKRINAR 967
KTNV+GTLNMLGL KR+ AR
Sbjct: 79 KTNVIGTLNMLGLXKRVXAR 138
>gb|CR394325.1|CR394325 CR394325 RN Pinus pinaster cDNA clone RN76G10, mRNA sequence
Length = 64
Score = 40.9 bits (83), Expect = 0.022
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 792 IARIFNTYGPRMCIDD 745
IARIF TYGPRMCIDD
Sbjct: 17 IARIFKTYGPRMCIDD 64
Score = 32.7 bits (65), Expect = 6.7
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 746 SSMHMRGPYVLKIRAI 793
SSMH+ GPYVL IRAI
Sbjct: 63 SSMHILGPYVLNIRAI 16
>gb|DR093163.1|DR093163 STRR1_6_B01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_6_B01_A033 5', mRNA sequence
Length = 841
Score = 40.5 bits (82), Expect = 0.030
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = -3 / +1
Query: 666 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
RSF ++ + VEG+++L + + + P N+G+ +M E+A++V
Sbjct: 1 RSFTFIDECVEGVLRLTKSDFIEPVNIGSDEMVSMNEMAEMV 126
>gb|BG318413.1|BG318413 NXPV_013_D02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_013_D02 5' similar to Arabidopsis
thaliana sequence At5g28840 epimerase/dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 490
Score = 40.0 bits (81), Expect = 0.042
Identities = 15/43 (34%), Positives = 29/43 (67%)
Frame = -3 / +1
Query: 669 TRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVV 541
TRSF ++ + VEG+++L + + P N+G+ +M E+A++V
Sbjct: 1 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 129
>gb|CX646840.1|CX646840 COLD1_11_G12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_G12_A029 5', mRNA sequence
Length = 885
Score = 40.0 bits (81), Expect = 0.042
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = -3 / +2
Query: 690 VYGDGKQTRSFQYVSDLVEGLMKL 619
++GDGKQTRSF ++ + VEG+++L
Sbjct: 806 MWGDGKQTRSFTFIDECVEGVLRL 877
>gb|CF666503.1|CF666503 RTCNT1_23_F08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_F08_A029 5', mRNA sequence
Length = 795
Score = 38.2 bits (77), Expect = 0.15
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3 / +3
Query: 744 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVE 634
G ++ F QA PLTVYG G QTR + + D V+
Sbjct: 474 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ 584
>gb|CO169140.1|CO169140 NDL1_4_H08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_4_H08_A029 5', mRNA sequence
Length = 656
Score = 38.2 bits (77), Expect = 0.15
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3 / +2
Query: 744 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVE 634
G ++ F QA PLTVYG G QTR + + D V+
Sbjct: 503 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ 613
>gb|DR050681.1|DR050681 RTBOR1_25_B11.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_B11_A029 3', mRNA sequence
Length = 957
Score = 38.2 bits (77), Expect = 0.15
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3 / +2
Query: 744 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVE 634
G ++ F QA PLTVYG G QTR + + D V+
Sbjct: 389 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ 499
>gb|DR050763.1|DR050763 RTBOR1_25_B11.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_B11_A029 5', mRNA sequence
Length = 904
Score = 38.2 bits (77), Expect = 0.15
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3 / +2
Query: 744 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVE 634
G ++ F QA PLTVYG G QTR + + D V+
Sbjct: 503 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ 613
>gb|DR682382.1|DR682382 EST1072457 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA952, mRNA sequence
Length = 811
Score = 38.2 bits (77), Expect = 0.15
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3 / -1
Query: 744 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVE 634
G ++ F QA PLTVYG G QTR + + D V+
Sbjct: 490 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ 380
>gb|AI919948.1|AI919948 1478 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
G12_PL13CSUH, mRNA sequence
Length = 653
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 232 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 327
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 332 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 249
>gb|BX252145.1|BX252145 BX252145 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP060D11, mRNA sequence
Length = 634
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / -3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 440 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 345
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 340 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 423
>gb|BM158907.1|BM158907 NXLV_041_C04_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_041_C04 5' similar to Arabidopsis thaliana
sequence At1g08200 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 670
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 240 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 335
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 340 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 257
>gb|BM367177.1|BM367177 NXLV_045_F07_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_045_F07 5' similar to Arabidopsis thaliana
sequence At1g08200 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 546
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 240 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 335
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 340 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 257
>gb|BQ106824.1|BQ106824 NXLV089_G06_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV089_G06 5' similar to Arabidopsis thaliana
sequence At1g08200 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 459
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 240 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 335
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 340 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 257
>gb|BQ198489.1|BQ198489 NXLV131_H03_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV131_H03 5' similar to Arabidopsis thaliana
sequence At2g27860 putative dTDP-glucose 4-6-dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 586
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 139 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 234
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 239 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 156
>gb|CF392814.1|CF392814 RTDR3_19_A09.b1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_19_A09_A022 3', mRNA
sequence
Length = 652
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 226 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 321
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 326 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 243
>gb|CF665125.1|CF665125 RTCNT1_14_C11.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_14_C11_A029 3', mRNA sequence
Length = 816
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 331 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 426
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -2
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 431 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 348
>gb|CF665210.1|CF665210 RTCNT1_14_C11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_14_C11_A029 5', mRNA sequence
Length = 697
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 505 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 600
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 605 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 522
>gb|BX678815.1|BX678815 BX678815 RS Pinus pinaster cDNA clone RS15E05, mRNA sequence
Length = 281
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +2
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 77 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 172
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 177 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 94
>gb|CO366299.1|CO366299 RTK1_27_B11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_B11_A029 3', mRNA sequence
Length = 697
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +2
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 284 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 379
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -2
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 384 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 301
>gb|DR052374.1|DR052374 RTCA1_4_F02.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F02_A029 3', mRNA sequence
Length = 924
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 487 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 582
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -2
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 587 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 504
>gb|DR052455.1|DR052455 RTCA1_4_F02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F02_A029 5', mRNA sequence
Length = 920
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 520 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 615
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 620 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 537
>gb|DR052646.1|DR052646 RTCA1_6_A01.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_6_A01_A029 3', mRNA sequence
Length = 669
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +2
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 248 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 343
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 348 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 265
>gb|DR069142.1|DR069142 RTDK1_5_E03.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_5_E03_A029 3', mRNA sequence
Length = 903
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 486 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 581
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 586 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 503
>gb|DR071273.1|DR071273 RTDK1_18_G09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_18_G09_A029 5', mRNA sequence
Length = 623
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 508 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 603
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 608 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 525
>gb|DR078284.1|DR078284 RTFEPL1_3_C11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_3_C11_A029 3', mRNA sequence
Length = 816
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 324 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 419
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 424 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 341
>gb|DR093422.1|DR093422 STRR1_8_E01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_E01_A033 3', mRNA sequence
Length = 830
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +2
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 404 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 499
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 504 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 421
>gb|DR093904.1|DR093904 STRR1_11_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_11_D08_A033 3', mRNA sequence
Length = 710
Score = 37.7 bits (76), Expect = 0.20
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3 / +3
Query: 510 EFRKNTQDDPHKRKPDISRAKEFLGWEPKIPL 415
EF DD KR PD++ KE LGW+PK L
Sbjct: 279 EFYGEGYDDSDKRIPDMTIIKERLGWDPKTSL 374
Score = 36.8 bits (74), Expect = 0.39
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -2
Query: 410 SRRGIFGSHPRNSLARLMSGLRLCGSSW 493
S + +FGSHP SL +MSG+RL SS+
Sbjct: 379 SHKDVFGSHPSRSLMIVMSGIRLSLSSY 296
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 816,455,176
Number of Sequences: 355925
Number of extensions: 12529647
Number of successful extensions: 69687
Number of sequences better than 10.0: 441
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 23250932415
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)