TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805013.2.2
(964 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ700812.1|BQ700812 NXRV111_F10_F NXRV (Nsf Xylem Root w... 325 3e-088
gb|CF388818.1|CF388818 RTDR2_15_G08.g1_A021 Loblolly pine r... 325 3e-088
gb|CF397754.1|CF397754 RTDS3_1_B02.g1_A022 Drought-stressed... 325 3e-088
gb|CF472745.1|CF472745 RTDS1_11_H01.g1_A015 Drought-stresse... 325 3e-088
gb|CF670179.1|CF670179 RTCNT1_48_C07.g1_A029 Root control P... 325 3e-088
gb|CF671787.1|CF671787 RTCNT1_59_F09.b1_A029 Root control P... 325 3e-088
gb|CO201236.1|CO201236 RTCNT2_4_A12.g1_A029 Root control 2 ... 325 3e-088
gb|DR023504.1|DR023504 STRS1_58_D02.b1_A034 Shoot tip pitch... 325 3e-088
gb|DR023795.1|DR023795 STRS1_60_D03.b1_A034 Shoot tip pitch... 325 3e-088
gb|DR054611.1|DR054611 RTCA1_18_A09.g1_A029 Roots minus cal... 325 3e-088
gb|DR091562.1|DR091562 RTAL1_22_B02.g1_A029 Roots plus adde... 325 3e-088
gb|DR181798.1|DR181798 RTMNUT1_41_C09.b1_A029 Roots minus m... 325 3e-088
gb|DR181881.1|DR181881 RTMNUT1_41_C09.g1_A029 Roots minus m... 325 3e-088
gb|DR684023.1|DR684023 EST1074100 Normalized pine embryo li... 325 3e-088
gb|DT631926.1|DT631926 EST1146857 Normalized pine embryo li... 325 3e-088
gb|CF667020.1|CF667020 RTCNT1_27_E06.g1_A029 Root control P... 323 1e-087
gb|CF667188.1|CF667188 RTCNT1_28_E06.g1_A029 Root control P... 323 1e-087
gb|DR387317.1|DR387317 RTHG1_21_A07.b1_A029 Roots plus adde... 323 1e-087
gb|CO163653.1|CO163653 FLD1_43_A05.b1_A029 Root flooded Pin... 323 1e-087
gb|CO163731.1|CO163731 FLD1_43_A05.g1_A029 Root flooded Pin... 323 1e-087
gb|DR683857.1|DR683857 EST1073933 Normalized pine embryo li... 322 2e-087
gb|DT631830.1|DT631830 EST1146761 Normalized pine embryo li... 322 2e-087
gb|DR023575.1|DR023575 STRS1_58_D02.g1_A034 Shoot tip pitch... 319 1e-086
gb|AW043372.1|AW043372 ST32F01 Pine TriplEx shoot tip libra... 317 9e-086
gb|CO200537.1|CO200537 GEO2_8_B10.b1_A032 Root gravitropism... 276 2e-073
gb|CO200619.1|CO200619 GEO2_8_B10.g1_A032 Root gravitropism... 276 2e-073
gb|CF397679.1|CF397679 RTDS3_1_B02.b2_A022 Drought-stressed... 266 2e-070
gb|CF670099.1|CF670099 RTCNT1_48_C07.b1_A029 Root control P... 260 1e-068
gb|CF391585.1|CF391585 RTDR3_9_D12.g1_A022 Loblolly pine ro... 255 3e-067
gb|DR012196.1|DR012196 HEAT1_10_H04.g1_A029 Root at 37 C fo... 243 1e-063
gb|AW011604.1|AW011604 ST22G08 Pine TriplEx shoot tip libra... 230 9e-063
gb|BM492088.1|BM492088 NXRV_020_E03_F NXRV (Nsf Xylem Root ... 234 8e-061
gb|DR109868.1|DR109868 RTS1_6_B07.b1_A029 Roots minus sulfu... 231 6e-060
gb|CF667101.1|CF667101 RTCNT1_28_E06.b1_A029 Root control P... 216 1e-055
gb|DR109927.1|DR109927 RTS1_6_B07.g1_A029 Roots minus sulfu... 215 4e-055
gb|CF666946.1|CF666946 RTCNT1_27_E06.b1_A029 Root control P... 214 7e-055
gb|AW042851.1|AW042851 ST26B10 Pine TriplEx shoot tip libra... 124 8e-039
gb|CO369959.1|CO369959 RTK1_55_C01.g1_A029 Roots minus pota... 157 1e-037
gb|CF472677.1|CF472677 RTDS1_11_H01.b1_A015 Drought-stresse... 154 1e-036
gb|AW497794.1|AW497794 PC02D01 Pine TriplEx pollen cone lib... 134 2e-034
gb|CF671154.1|CF671154 RTCNT1_55_D04.b1_A029 Root control P... 125 4e-028
gb|BM902702.1|BM902702 NXLV_057_H12_F NXLV (Nsf Xylem Late ... 122 5e-027
gb|DR023876.1|DR023876 STRS1_60_D03.g1_A034 Shoot tip pitch... 121 7e-027
gb|BM902756.1|BM902756 NXLV_073_G12_F NXLV (Nsf Xylem Late ... 116 2e-025
gb|CF388746.1|CF388746 RTDR2_15_G08.b1_A021 Loblolly pine r... 105 5e-022
>gb|BQ700812.1|BQ700812 NXRV111_F10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV111_F10 5' similar to Arabidopsis thaliana
sequence At1g02140 Mago Nashi-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 736
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 154 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 333
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 334 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 513
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 514 LVQDLKCFVFSLIGLHFKIKPI 579
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 578 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 399
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 398 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 219
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 218 NSNSRNSWPNLPL*PT*YLT*N 153
>gb|CF388818.1|CF388818 RTDR2_15_G08.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_15_G08_A021 5', mRNA
sequence
Length = 664
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 18 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 197
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 198 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 377
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 378 LVQDLKCFVFSLIGLHFKIKPI 443
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 442 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 263
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 262 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 83
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 82 NSNSRNSWPNLPL*PT*YLT*N 17
>gb|CF397754.1|CF397754 RTDS3_1_B02.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_B02_A022 5', mRNA sequence
Length = 721
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 166 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 345
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 346 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 525
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 526 LVQDLKCFVFSLIGLHFKIKPI 591
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 590 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 411
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 410 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 231
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 230 NSNSRNSWPNLPL*PT*YLT*N 165
>gb|CF472745.1|CF472745 RTDS1_11_H01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_H01_A015 5', mRNA sequence
Length = 760
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 51 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 230
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 231 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 410
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 411 LVQDLKCFVFSLIGLHFKIKPI 476
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 475 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 296
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 295 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 116
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 115 NSNSRNSWPNLPL*PT*YLT*N 50
>gb|CF670179.1|CF670179 RTCNT1_48_C07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_48_C07_A029 5', mRNA sequence
Length = 857
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 167 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 346
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 347 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 526
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 527 LVQDLKCFVFSLIGLHFKIKPI 592
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 591 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 412
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 411 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 232
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 231 NSNSRNSWPNLPL*PT*YLT*N 166
>gb|CF671787.1|CF671787 RTCNT1_59_F09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_59_F09_A029 3', mRNA sequence
Length = 698
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / -1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 608 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 429
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 428 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 249
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 248 LVQDLKCFVFSLIGLHFKIKPI 183
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / +1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 184 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 363
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 364 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 543
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 544 NSNSRNSWPNLPL*PT*YLT*N 609
>gb|CO201236.1|CO201236 RTCNT2_4_A12.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_4_A12_A029 5', mRNA sequence
Length = 687
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 63 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 242
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 243 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 422
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 423 LVQDLKCFVFSLIGLHFKIKPI 488
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 487 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 308
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 307 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 128
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 127 NSNSRNSWPNLPL*PT*YLT*N 62
>gb|DR023504.1|DR023504 STRS1_58_D02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_D02_A034 3', mRNA sequence
Length = 854
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 75 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 254
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 255 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 434
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 435 LVQDLKCFVFSLIGLHFKIKPI 500
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -2
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 499 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 320
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 319 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 140
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 139 NSNSRNSWPNLPL*PT*YLT*N 74
>gb|DR023795.1|DR023795 STRS1_60_D03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_60_D03_A034 3', mRNA sequence
Length = 827
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 49 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 228
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 229 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 408
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 409 LVQDLKCFVFSLIGLHFKIKPI 474
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 473 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 294
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 293 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 114
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 113 NSNSRNSWPNLPL*PT*YLT*N 48
>gb|DR054611.1|DR054611 RTCA1_18_A09.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_A09_A029 5', mRNA sequence
Length = 780
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / -3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 613 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 434
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 433 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 254
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 253 LVQDLKCFVFSLIGLHFKIKPI 188
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / +3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 189 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 368
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 369 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 548
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 549 NSNSRNSWPNLPL*PT*YLT*N 614
>gb|DR091562.1|DR091562 RTAL1_22_B02.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_B02_A029 5', mRNA sequence
Length = 784
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / -3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 665 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 486
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 485 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 306
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 305 LVQDLKCFVFSLIGLHFKIKPI 240
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / +1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 241 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 420
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 421 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 600
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 601 NSNSRNSWPNLPL*PT*YLT*N 666
>gb|DR181798.1|DR181798 RTMNUT1_41_C09.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_41_C09_A029 3', mRNA sequence
Length = 757
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / -1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 658 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 479
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 478 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 299
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 298 LVQDLKCFVFSLIGLHFKIKPI 233
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / +3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 234 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 413
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 414 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 593
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 594 NSNSRNSWPNLPL*PT*YLT*N 659
>gb|DR181881.1|DR181881 RTMNUT1_41_C09.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_41_C09_A029 5', mRNA sequence
Length = 725
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / -1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 629 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 450
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 449 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 270
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 269 LVQDLKCFVFSLIGLHFKIKPI 204
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / +1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 205 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 384
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 385 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 564
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 565 NSNSRNSWPNLPL*PT*YLT*N 630
>gb|DR684023.1|DR684023 EST1074100 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAO06 3' end, mRNA sequence
Length = 824
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 274 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 453
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 454 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 633
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 634 LVQDLKCFVFSLIGLHFKIKPI 699
Score = 187 bits (403), Expect = 1e-046
Identities = 99/142 (69%), Positives = 104/142 (73%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R + ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 698 IGLILK*RPIRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 519
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S MI S RT TSLRIMVSF LPSGR
Sbjct: 518 *RPTLSGSGQLLSSSFIISLSAMIRRHSLRTACVRNTSLRIMVSFL*FELFA*RSLPSGR 339
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 338 NSNSRNSWPNLPL*PT*YLT*N 273
>gb|DT631926.1|DT631926 EST1146857 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFE41 3' end, mRNA sequence
Length = 832
Score = 325 bits (704), Expect = 3e-088
Identities = 131/142 (92%), Positives = 138/142 (97%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 282 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 461
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 462 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 641
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 642 LVQDLKCFVFSLIGLHFKIKPI 707
Score = 187 bits (403), Expect = 1e-046
Identities = 99/142 (69%), Positives = 104/142 (73%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R + ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 706 IGLILK*RPIRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 527
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S MI S RT TSLRIMVSF LPSGR
Sbjct: 526 *RPTLSGSGQLLSSSFIISLSAMIRRHSLRTACVRNTSLRIMVSFL*FELFA*RSLPSGR 347
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 346 NSNSRNSWPNLPL*PT*YLT*N 281
>gb|CF667020.1|CF667020 RTCNT1_27_E06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_E06_A029 5', mRNA sequence
Length = 828
Score = 323 bits (700), Expect = 1e-087
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +V RE RRII
Sbjct: 105 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVFRECRRII 284
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 285 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 464
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 465 LVQDLKCFVFSLIGLHFKIKPI 530
Score = 188 bits (406), Expect = 4e-047
Identities = 99/142 (69%), Positives = 105/142 (73%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 529 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 350
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S +T KTSLRIMVSF LPSGR
Sbjct: 349 *RPTLSGSGQLLSSSFIISLSAIIRRHSLKTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 170
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 169 NSNSRNSWPNLPL*PT*YLT*N 104
>gb|CF667188.1|CF667188 RTCNT1_28_E06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_28_E06_A029 5', mRNA sequence
Length = 793
Score = 323 bits (700), Expect = 1e-087
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +V RE RRII
Sbjct: 88 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVFRECRRII 267
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 268 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 447
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 448 LVQDLKCFVFSLIGLHFKIKPI 513
Score = 188 bits (406), Expect = 4e-047
Identities = 99/142 (69%), Positives = 105/142 (73%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 512 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 333
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S +T KTSLRIMVSF LPSGR
Sbjct: 332 *RPTLSGSGQLLSSSFIISLSAIIRRHSLKTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 153
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 152 NSNSRNSWPNLPL*PT*YLT*N 87
>gb|DR387317.1|DR387317 RTHG1_21_A07.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_21_A07_A029 3', mRNA sequence
Length = 696
Score = 323 bits (700), Expect = 1e-087
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGK RYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 70 FYVRYYVGHKGKFGHEFLEFEFRPDGKFRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 249
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 250 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 429
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 430 LVQDLKCFVFSLIGLHFKIKPI 495
Score = 149 bits (321), Expect(2) = 2e-044
Identities = 77/105 (73%), Positives = 82/105 (78%)
Frame = -3 / -2
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 494 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 315
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSF 201
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF
Sbjct: 314 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSF 180
Score = 50.1 bits (103), Expect(2) = 2e-044
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -3 / -2
Query: 167 PSGRNSNSRNSCPNLPLCPT*YRR*N 90
PSGRNSNSRNS PNLPL PT*Y *N
Sbjct: 146 PSGRNSNSRNSWPNLPL*PT*YLT*N 69
>gb|CO163653.1|CO163653 FLD1_43_A05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_43_A05_A029 3', mRNA sequence
Length = 920
Score = 323 bits (699), Expect = 1e-087
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 225 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 404
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTS IGSLVDVQSSKDPEGLRIFYY
Sbjct: 405 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSNIGSLVDVQSSKDPEGLRIFYY 584
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 585 LVQDLKCFVFSLIGLHFKIKPI 650
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -2
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 649 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 470
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 469 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 290
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 289 NSNSRNSWPNLPL*PT*YLT*N 224
>gb|CO163731.1|CO163731 FLD1_43_A05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_43_A05_A029 5', mRNA sequence
Length = 884
Score = 323 bits (699), Expect = 1e-087
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 208 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 387
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTS IGSLVDVQSSKDPEGLRIFYY
Sbjct: 388 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSNIGSLVDVQSSKDPEGLRIFYY 567
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 568 LVQDLKCFVFSLIGLHFKIKPI 633
Score = 190 bits (409), Expect = 1e-047
Identities = 100/142 (70%), Positives = 105/142 (73%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 632 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 453
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 452 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 273
Query: 155 NSNSRNSCPNLPLCPT*YRR*N 90
NSNSRNS PNLPL PT*Y *N
Sbjct: 272 NSNSRNSWPNLPL*PT*YLT*N 207
>gb|DR683857.1|DR683857 EST1073933 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAM11 3' end, mRNA sequence
Length = 837
Score = 322 bits (698), Expect = 2e-087
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPD KLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 190 FYVRYYVGHKGKFGHEFLEFEFRPDSKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 369
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 370 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 549
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 550 LVQDLKCFVFSLIGLHFKIKPI 615
Score = 147 bits (315), Expect(2) = 1e-042
Identities = 76/105 (72%), Positives = 81/105 (77%)
Frame = -3 / -2
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R + ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 614 IGLILK*RPIRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 435
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSF 201
RP SGSGQLLSSSF+IS S MI S RT TSLRIMVSF
Sbjct: 434 *RPTLSGSGQLLSSSFIISLSAMIRRHSLRTACVRNTSLRIMVSF 300
Score = 46.9 bits (96), Expect(2) = 1e-042
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = -3 / -2
Query: 164 SGRNSNSRNSCPNLPLCPT*YRR*N 90
SGRNSNSRNS PNLPL PT*Y *N
Sbjct: 263 SGRNSNSRNSWPNLPL*PT*YLT*N 189
>gb|DT631830.1|DT631830 EST1146761 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFD25 3' end, mRNA sequence
Length = 749
Score = 322 bits (698), Expect = 2e-087
Identities = 130/142 (91%), Positives = 137/142 (96%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPD KLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 197 FYVRYYVGHKGKFGHEFLEFEFRPDSKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 376
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 377 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 556
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI LHFKIKPI
Sbjct: 557 LVQDLKCFVFSLIGLHFKIKPI 622
Score = 147 bits (315), Expect(2) = 1e-042
Identities = 76/105 (72%), Positives = 81/105 (77%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R + ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 621 IGLILK*RPIRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 442
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSF 201
RP SGSGQLLSSSF+IS S MI S RT TSLRIMVSF
Sbjct: 441 *RPTLSGSGQLLSSSFIISLSAMIRRHSLRTACVRNTSLRIMVSF 307
Score = 46.9 bits (96), Expect(2) = 1e-042
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = -3 / -3
Query: 164 SGRNSNSRNSCPNLPLCPT*YRR*N 90
SGRNSNSRNS PNLPL PT*Y *N
Sbjct: 270 SGRNSNSRNSWPNLPL*PT*YLT*N 196
>gb|DR023575.1|DR023575 STRS1_58_D02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_D02_A034 5', mRNA sequence
Length = 645
Score = 319 bits (692), Expect = 1e-086
Identities = 129/142 (90%), Positives = 137/142 (96%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 156 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 335
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 336 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 515
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
LVQDLKCFVFSLI L FKIKP+
Sbjct: 516 LVQDLKCFVFSLIGLPFKIKPL 581
Score = 188 bits (405), Expect = 5e-047
Identities = 99/141 (70%), Positives = 104/141 (73%)
Frame = -3 / -3
Query: 512 GLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSSC 333
GLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 577 GLILKGRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS* 398
Query: 332 RPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRN 153
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGRN
Sbjct: 397 RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGRN 218
Query: 152 SNSRNSCPNLPLCPT*YRR*N 90
SNSRNS PNLPL PT*Y *N
Sbjct: 217 SNSRNSWPNLPL*PT*YLT*N 155
>gb|AW043372.1|AW043372 ST32F01 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST32F01, mRNA sequence
Length = 600
Score = 317 bits (686), Expect = 9e-086
Identities = 129/145 (88%), Positives = 137/145 (94%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 125 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 304
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 305 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 484
Query: 451 LVQDLKCFVFSLINLHFKIKPIQS* 525
LV DLKCFVFS LH KIKPIQ+*
Sbjct: 485 LVXDLKCFVFSXNGLHXKIKPIQA* 559
Score = 187 bits (402), Expect = 1e-046
Identities = 97/143 (67%), Positives = 104/143 (72%)
Frame = -3 / -1
Query: 518 WIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISS 339
WIGLIL + ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISS
Sbjct: 552 WIGLILXCSPLXENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISS 373
Query: 338 SCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSG 159
S RP SGSGQLLSSSF+IS S +I S RT KTSLRI+VSF LPSG
Sbjct: 372 S*RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIIVSFL*FELFA*RSLPSG 193
Query: 158 RNSNSRNSCPNLPLCPT*YRR*N 90
RNSNSRNS PNLPL PT*Y *N
Sbjct: 192 RNSNSRNSWPNLPL*PT*YLT*N 124
>gb|CO200537.1|CO200537 GEO2_8_B10.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_B10_A032 3', mRNA sequence
Length = 426
Score = 276 bits (597), Expect = 2e-073
Identities = 113/123 (91%), Positives = 119/123 (96%)
Frame = +1 / -1
Query: 148 FEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRI 327
FEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII ES+IMKEDD+NWPEPDR+
Sbjct: 426 FEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRIIAESEIMKEDDNNWPEPDRV 247
Query: 328 GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKI 507
GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LHFKI
Sbjct: 246 GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKI 67
Query: 508 KPI 516
KPI
Sbjct: 66 KPI 58
Score = 157 bits (338), Expect = 9e-038
Identities = 84/122 (68%), Positives = 89/122 (72%)
Frame = -3 / +2
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 59 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 238
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 239 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 418
Query: 155 NS 150
NS
Sbjct: 419 NS 424
>gb|CO200619.1|CO200619 GEO2_8_B10.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_B10_A032 5', mRNA sequence
Length = 398
Score = 276 bits (597), Expect = 2e-073
Identities = 113/123 (91%), Positives = 119/123 (96%)
Frame = +1 / -1
Query: 148 FEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRI 327
FEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII ES+IMKEDD+NWPEPDR+
Sbjct: 398 FEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRIIAESEIMKEDDNNWPEPDRV 219
Query: 328 GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKI 507
GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LHFKI
Sbjct: 218 GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKI 39
Query: 508 KPI 516
KPI
Sbjct: 38 KPI 30
Score = 157 bits (338), Expect = 9e-038
Identities = 84/122 (68%), Positives = 89/122 (72%)
Frame = -3 / +1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 31 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 210
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGR 156
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSGR
Sbjct: 211 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSGR 390
Query: 155 NS 150
NS
Sbjct: 391 NS 396
>gb|CF397679.1|CF397679 RTDS3_1_B02.b2_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_B02_A022 3', mRNA sequence
Length = 558
Score = 266 bits (575), Expect = 2e-070
Identities = 109/119 (91%), Positives = 115/119 (96%)
Frame = +1 / +2
Query: 160 PDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQE 339
PDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII ES+IMKEDD+NWPEPDR+GRQE
Sbjct: 2 PDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRIIAESEIMKEDDNNWPEPDRVGRQE 181
Query: 340 LEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 516
LEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LHFKIKPI
Sbjct: 182 LEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKIKPI 358
Score = 150 bits (323), Expect = 1e-035
Identities = 81/119 (68%), Positives = 86/119 (72%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 357 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 178
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSG 159
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF LPSG
Sbjct: 177 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSFL*FELFA*RSLPSG 1
>gb|CF670099.1|CF670099 RTCNT1_48_C07.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_48_C07_A029 3', mRNA sequence
Length = 615
Score = 260 bits (562), Expect = 1e-068
Identities = 107/117 (91%), Positives = 113/117 (96%)
Frame = +1 / +3
Query: 166 GKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELE 345
GKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII ES+IMKEDD+NWPEPDR+GRQELE
Sbjct: 3 GKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRIIAESEIMKEDDNNWPEPDRVGRQELE 182
Query: 346 IVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 516
IVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LHFKIKPI
Sbjct: 183 IVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKIKPI 353
Score = 149 bits (321), Expect = 2e-035
Identities = 77/105 (73%), Positives = 82/105 (78%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 352 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 173
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSF 201
RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF
Sbjct: 172 *RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRIMVSF 38
>gb|CF391585.1|CF391585 RTDR3_9_D12.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_9_D12_A022 5', mRNA
sequence
Length = 606
Score = 255 bits (552), Expect = 3e-067
Identities = 102/112 (91%), Positives = 109/112 (97%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 269 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 448
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDP 426
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDP
Sbjct: 449 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDP 604
Score = 145 bits (312), Expect = 4e-034
Identities = 77/113 (68%), Positives = 81/113 (71%)
Frame = -3 / -1
Query: 428 SGSLLDWTSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASR 249
SGSLL TSTR+PILEVV E+CS P+TISSS RP SGSGQLLSSSF+IS S MI S
Sbjct: 606 SGSLLLCTSTRDPILEVVKEICSFPITISSS*RPTLSGSGQLLSSSFIISLSAMIRRHSL 427
Query: 248 RTEGETKTSLRIMVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
RT TSLRIMVSF LPSGRNSNSRNS PNLPL PT*Y *N
Sbjct: 426 RTACVRNTSLRIMVSFL*FELFA*RSLPSGRNSNSRNSWPNLPL*PT*YLT*N 268
>gb|DR012196.1|DR012196 HEAT1_10_H04.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_10_H04_A029 5', mRNA sequence
Length = 493
Score = 243 bits (525), Expect = 1e-063
Identities = 97/108 (89%), Positives = 104/108 (96%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIR EVF++ +VLRE RRII
Sbjct: 170 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRNEVFLTQAVLRECRRII 349
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQS 414
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQS
Sbjct: 350 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQS 493
Score = 138 bits (296), Expect = 6e-032
Identities = 72/106 (67%), Positives = 77/106 (72%)
Frame = -3 / -2
Query: 407 TSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETK 228
TSTR+PILEVV E+CS P+TISSS RP SGSGQLLSSSF+IS S +I S RT K
Sbjct: 486 TSTRDPILEVVKEICSFPITISSS*RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRK 307
Query: 227 TSLRIMVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
TSLRIMVSF LPSGRNSNSRNS PNLPL PT*Y *N
Sbjct: 306 TSLRIMVSFL*FELFA*RSLPSGRNSNSRNSWPNLPL*PT*YLT*N 169
>gb|AW011604.1|AW011604 ST22G08 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST22G08, mRNA sequence
Length = 600
Score = 230 bits (496), Expect(2) = 9e-063
Identities = 92/109 (84%), Positives = 102/109 (93%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGH+FLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 196 FYVRYYVGHKGKFGHKFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 375
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSS 417
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKI V VQ++
Sbjct: 376 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIRFPVXVQNN 522
Score = 125 bits (267), Expect = 6e-028
Identities = 68/106 (64%), Positives = 72/106 (67%)
Frame = -3 / -2
Query: 407 TSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETK 228
T T ILEVV E+CS P+TISSS RP SGSGQLLSSSF+IS S +I S RT K
Sbjct: 512 TXTGNLILEVVKEICSFPITISSS*RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRK 333
Query: 227 TSLRIMVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
TSLRIMVSF LPSGRNSNSRN PNLPL PT*Y *N
Sbjct: 332 TSLRIMVSFL*FELFA*RSLPSGRNSNSRNLWPNLPL*PT*YLT*N 195
Score = 31.3 bits (62), Expect(2) = 9e-063
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 415 SKDPEGLRIFYYLVQDLKCF 474
+K PEG RIF LVQ KCF
Sbjct: 521 TKXPEGPRIFXXLVQGPKCF 580
>gb|BM492088.1|BM492088 NXRV_020_E03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_020_E03 5' similar to Arabidopsis thaliana
sequence At1g02140 Mago Nashi-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 442
Score = 234 bits (505), Expect = 8e-061
Identities = 94/112 (83%), Positives = 101/112 (90%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 104 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 283
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDP 426
ES+IMKEDD+NWPEPD +GR LEIVMGNEHISFTTSK SLVDVQS P
Sbjct: 284 AESEIMKEDDNNWPEPDXVGRXXLEIVMGNEHISFTTSKXXSLVDVQSXXXP 439
Score = 132 bits (283), Expect = 4e-030
Identities = 70/106 (66%), Positives = 74/106 (69%)
Frame = -3 / -2
Query: 407 TSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETK 228
TSTR ILEVV E+CS P+TISS RP SGSGQLLSSSF+IS S +I S RT K
Sbjct: 420 TSTRXXILEVVKEICSFPITISSXXRPTXSGSGQLLSSSFIISLSAIIRRHSLRTA*VRK 241
Query: 227 TSLRIMVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
TSLRIMVSF LPSGRNSNSRNS PNLPL PT*Y *N
Sbjct: 240 TSLRIMVSFL*FELFA*RSLPSGRNSNSRNSWPNLPL*PT*YLT*N 103
>gb|DR109868.1|DR109868 RTS1_6_B07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_6_B07_A029 3', mRNA sequence
Length = 409
Score = 231 bits (499), Expect = 6e-060
Identities = 91/101 (90%), Positives = 98/101 (97%)
Frame = +1 / -1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VLRE RRII
Sbjct: 304 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLRECRRII 125
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIG 393
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIG
Sbjct: 124 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIG 2
Score = 128 bits (275), Expect = 4e-029
Identities = 68/101 (67%), Positives = 72/101 (71%)
Frame = -3 / +3
Query: 392 PILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRI 213
PILEVV E+CS P+TISSS RP SGSGQLLSSSF+IS S +I S RT KTSLRI
Sbjct: 3 PILEVVKEICSFPITISSS*RPTLSGSGQLLSSSFIISLSAIIRRHSLRTA*VRKTSLRI 182
Query: 212 MVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
MVSF LPSGRNSNSRNS PNLPL PT*Y *N
Sbjct: 183 MVSFL*FELFA*RSLPSGRNSNSRNSWPNLPL*PT*YLT*N 305
>gb|CF667101.1|CF667101 RTCNT1_28_E06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_28_E06_A029 3', mRNA sequence
Length = 688
Score = 216 bits (467), Expect = 1e-055
Identities = 89/100 (89%), Positives = 95/100 (95%)
Frame = +1 / +2
Query: 217 RKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGS 396
RKEVF++ +V RE RRII ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGS
Sbjct: 2 RKEVFLTQAVFRECRRIIAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGS 181
Query: 397 LVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 516
LVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LHFKIKPI
Sbjct: 182 LVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKIKPI 301
Score = 138 bits (295), Expect = 8e-032
Identities = 71/100 (71%), Positives = 77/100 (77%)
Frame = -3 / -2
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 300 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 121
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLR 216
RP SGSGQLLSSSF+IS S +I S +T KTSLR
Sbjct: 120 *RPTLSGSGQLLSSSFIISLSAIIRRHSLKTA*VRKTSLR 1
>gb|DR109927.1|DR109927 RTS1_6_B07.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_6_B07_A029 5', mRNA sequence
Length = 497
Score = 215 bits (464), Expect = 4e-055
Identities = 84/95 (88%), Positives = 91/95 (95%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VL E RRII
Sbjct: 211 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVLMECRRII 390
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISF 375
ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISF
Sbjct: 391 AESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISF 495
Score = 118 bits (252), Expect = 7e-026
Identities = 63/96 (65%), Positives = 67/96 (69%)
Frame = -3 / -1
Query: 377 VNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFX 198
V E+CS P+TISSS RP SGSGQLLSSSF+IS S +I S RT KTSLRIMVSF
Sbjct: 497 VKEICSFPITISSS*RPTLSGSGQLLSSSFIISLSAIIRRHSMRTA*VRKTSLRIMVSFL 318
Query: 197 XXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
LPSGRNSNSRNS PNLPL PT*Y *N
Sbjct: 317 *FELFA*RSLPSGRNSNSRNSWPNLPL*PT*YLT*N 210
>gb|CF666946.1|CF666946 RTCNT1_27_E06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_E06_A029 3', mRNA sequence
Length = 686
Score = 214 bits (462), Expect = 7e-055
Identities = 88/99 (88%), Positives = 94/99 (94%)
Frame = +1 / +3
Query: 220 KEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSL 399
KEVF++ +V RE RRII ES+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSL
Sbjct: 3 KEVFLTQAVFRECRRIIAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSL 182
Query: 400 VDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 516
VDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LHFKIKPI
Sbjct: 183 VDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKIKPI 299
Score = 135 bits (290), Expect = 4e-031
Identities = 70/99 (70%), Positives = 76/99 (76%)
Frame = -3 / -2
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 298 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 119
Query: 335 CRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSL 219
RP SGSGQLLSSSF+IS S +I S +T KTSL
Sbjct: 118 *RPTLSGSGQLLSSSFIISLSAIIRRHSLKTA*VRKTSL 2
>gb|AW042851.1|AW042851 ST26B10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST26B10, mRNA sequence
Length = 526
Score = 124 bits (265), Expect(2) = 8e-039
Identities = 50/60 (83%), Positives = 52/60 (86%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV + R ARR I
Sbjct: 179 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVSLLKLFSRNARRXI 358
Score = 57.0 bits (118), Expect(2) = 8e-039
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1 / +1
Query: 289 KEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEG 432
+ DD+NWPEPD++G + GNE SFTTSKI SL + + P G
Sbjct: 379 RXDDNNWPEPDKVGPSGAGNIXGNEQNSFTTSKIRSLAMXKVXRVPXG 522
>gb|CO369959.1|CO369959 RTK1_55_C01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_C01_A029 5', mRNA sequence
Length = 490
Score = 157 bits (337), Expect = 1e-037
Identities = 65/68 (95%), Positives = 66/68 (97%)
Frame = +1 / +1
Query: 313 EPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIN 492
EPDR+GRQELEI MGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI
Sbjct: 1 EPDRVGRQELEIFMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIG 180
Query: 493 LHFKIKPI 516
LHFKIKPI
Sbjct: 181 LHFKIKPI 204
Score = 103 bits (220), Expect = 2e-021
Identities = 50/67 (74%), Positives = 53/67 (79%)
Frame = -3 / -3
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+ ISSS
Sbjct: 203 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPINISSS 24
Query: 335 CRPMRSG 315
RP SG
Sbjct: 23 *RPTLSG 3
>gb|CF472677.1|CF472677 RTDS1_11_H01.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_H01_A015 3', mRNA sequence
Length = 574
Score = 154 bits (330), Expect = 1e-036
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = +1 / +3
Query: 319 DRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLH 498
DR+GRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LH
Sbjct: 3 DRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLH 182
Query: 499 FKIKPI 516
FKIKPI
Sbjct: 183 FKIKPI 200
Score = 103 bits (219), Expect = 2e-021
Identities = 50/66 (75%), Positives = 53/66 (80%)
Frame = -3 / -1
Query: 515 IGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSS 336
IGLILK R M ENTKH RS TR**KIR PSGSLL TSTR+PILEVV E+CS P+TISSS
Sbjct: 199 IGLILKCRPMRENTKHLRS*TR**KIRRPSGSLLLCTSTRDPILEVVKEICSFPITISSS 20
Query: 335 CRPMRS 318
RP S
Sbjct: 19 *RPTLS 2
>gb|AW497794.1|AW497794 PC02D01 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC02D01, mRNA sequence
Length = 518
Score = 134 bits (288), Expect(2) = 2e-034
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMI EVF++ +VLRE RRII
Sbjct: 287 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIXXEVFLTQAVLRECRRII 466
Query: 271 QE 276
E
Sbjct: 467 AE 472
Score = 31.8 bits (63), Expect(2) = 2e-034
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 268 IQESDIMKEDDSNWPEPD 321
+ + +IMKEDD+NWP D
Sbjct: 465 LPKGEIMKEDDNNWPXXD 518
>gb|CF671154.1|CF671154 RTCNT1_55_D04.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_55_D04_A029 3', mRNA sequence
Length = 408
Score = 125 bits (268), Expect = 4e-028
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +1 / -1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVL 249
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VL
Sbjct: 159 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVL 1
>gb|BM902702.1|BM902702 NXLV_057_H12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_057_H12 5' similar to Arabidopsis thaliana
sequence At1g02140 Mago Nashi-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 218
Score = 122 bits (260), Expect = 5e-027
Identities = 52/57 (91%), Positives = 53/57 (92%)
Frame = +1 / +1
Query: 355 GNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS* 525
GN HISFTTSKIGSLVDV SSKDPEGLRIFYYLVQDLKCFVFSLI LHFKIKPI +*
Sbjct: 19 GN*HISFTTSKIGSLVDVHSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKIKPIXT* 189
>gb|DR023876.1|DR023876 STRS1_60_D03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_60_D03_A034 5', mRNA sequence
Length = 301
Score = 121 bits (259), Expect = 7e-027
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVL 249
FY+RYYVGHKGKFGH FLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++ +VL
Sbjct: 143 FYVRYYVGHKGKFGH*FLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTQAVL 301
>gb|BM902756.1|BM902756 NXLV_073_G12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_073_G12 5' similar to Arabidopsis thaliana
sequence At1g02140 Mago Nashi-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 206
Score = 116 bits (249), Expect = 2e-025
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVS 237
FY+RYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRK F++
Sbjct: 58 FYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKXXFLT 204
>gb|CF388746.1|CF388746 RTDR2_15_G08.b1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_15_G08_A021 3', mRNA
sequence
Length = 560
Score = 105 bits (224), Expect = 5e-022
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +1 / +1
Query: 382 SKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 516
SKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLI LHFKIKPI
Sbjct: 1 SKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLIGLHFKIKPI 135
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 445,040,232
Number of Sequences: 355925
Number of extensions: 6567250
Number of successful extensions: 53150
Number of sequences better than 1.0e-020: 55
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 14300979240
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)