TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.2
(798 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX254201.1|BX254201 BX254201 Pinus pinaster differenciat... 255 3e-067
gb|CR354638.1|CR354638 CR354638 Pinus pinaster differenciat... 255 3e-067
gb|CR354740.1|CR354740 CR354740 Pinus pinaster differenciat... 255 3e-067
gb|BQ290460.1|BQ290460 NXRV046_E07_F NXRV (Nsf Xylem Root w... 254 6e-067
gb|CX714968.1|CX714968 RTPQ1_28_E12.g1_A032 Roots treated w... 253 8e-067
gb|DR081240.1|DR081240 RTFEPL1_28_G08.b1_A029 Roots plus ad... 253 8e-067
gb|DR386241.1|DR386241 RTHG1_13_G06.g1_A029 Roots plus adde... 253 8e-067
gb|BQ698941.1|BQ698941 NXRV117_D04_F NXRV (Nsf Xylem Root w... 251 4e-066
gb|BQ701629.1|BQ701629 NXSI_111_G08_F NXSI (Nsf Xylem Side ... 251 5e-066
gb|CF670058.1|CF670058 RTCNT1_47_G09.g1_A029 Root control P... 251 5e-066
gb|BQ290949.1|BQ290949 NXRV051_G01_F NXRV (Nsf Xylem Root w... 250 7e-066
gb|AI812834.1|AI812834 19H3 Pine Lambda Zap Xylem library P... 250 1e-065
gb|AL750924.1|AL750924 AL750924 RS Pinus pinaster cDNA clon... 250 1e-065
gb|AL751075.1|AL751075 AL751075 RS Pinus pinaster cDNA clon... 250 1e-065
gb|BX249075.1|BX249075 BX249075 Pinus pinaster differenciat... 250 1e-065
gb|BX249530.1|BX249530 BX249530 Pinus pinaster differenciat... 250 1e-065
gb|BX253410.1|BX253410 BX253410 Pinus pinaster differenciat... 250 1e-065
gb|BX253827.1|BX253827 BX253827 Pinus pinaster differenciat... 250 1e-065
gb|BG040720.1|BG040720 NXSI_114_C09_F NXSI (Nsf Xylem Side ... 250 1e-065
gb|BQ703180.1|BQ703180 NXSI_137_E12_F NXSI (Nsf Xylem Side ... 250 1e-065
gb|CF472547.1|CF472547 RTDS1_10_E04.g1_A015 Drought-stresse... 250 1e-065
gb|CF476158.1|CF476158 RTWW2_21_H04.g1_A021 Well-watered lo... 250 1e-065
gb|CF669131.1|CF669131 RTCNT1_40_G09.g1_A029 Root control P... 250 1e-065
gb|BX681751.1|BX681751 BX681751 RS Pinus pinaster cDNA clon... 250 1e-065
gb|CR392451.1|CR392451 CR392451 RN Pinus pinaster cDNA clon... 250 1e-065
gb|CX651979.1|CX651979 COLD1_56_D01.b1_A029 Root cold Pinus... 250 1e-065
gb|CX652049.1|CX652049 COLD1_56_D01.g1_A029 Root cold Pinus... 250 1e-065
gb|DR012165.1|DR012165 HEAT1_10_D11.g1_A029 Root at 37 C fo... 250 1e-065
gb|DR119433.1|DR119433 RTMG1_23_F01.b1_A029 Roots minus mag... 250 1e-065
gb|DR119514.1|DR119514 RTMG1_23_F01.g1_A029 Roots minus mag... 250 1e-065
gb|DR687844.1|DR687844 EST1077927 Normalized pine embryo li... 250 1e-065
gb|DR742542.1|DR742542 RTCU1_4_G11.g1_A029 Roots plus added... 250 1e-065
gb|DT634364.1|DT634364 EST1149295 Normalized pine embryo li... 250 1e-065
gb|BX681807.1|BX681807 BX681807 RS Pinus pinaster cDNA clon... 249 1e-065
gb|DR096714.1|DR096714 STRR1_29_G01.g1_A033 Stem Response R... 249 1e-065
gb|BQ702611.1|BQ702611 NXSI_130_E08_F NXSI (Nsf Xylem Side ... 248 3e-065
gb|CF666732.1|CF666732 RTCNT1_25_E11.g1_A029 Root control P... 248 3e-065
gb|BQ701872.1|BQ701872 NXSI_121_F01_F NXSI (Nsf Xylem Side ... 248 4e-065
gb|AA556860.1|AA556860 702 Loblolly pine C Pinus taeda cDNA... 244 5e-064
gb|BG039583.1|BG039583 NXSI_100_F06_F NXSI (Nsf Xylem Side ... 244 6e-064
gb|CO172881.1|CO172881 NDL1_32_B08.g1_A029 Needles control ... 241 6e-063
gb|BG275750.1|BG275750 NXSI_145_E05_F NXSI (Nsf Xylem Side ... 239 1e-062
gb|CR392154.1|CR392154 CR392154 RN Pinus pinaster cDNA clon... 238 3e-062
gb|BM492300.1|BM492300 NXRV_024_C12_F NXRV (Nsf Xylem Root ... 236 1e-061
gb|CX714867.1|CX714867 RTPQ1_27_E03.g1_A032 Roots treated w... 236 2e-061
gb|AW870058.1|AW870058 NXNV_123_E12_F Nsf Xylem Normal wood... 230 9e-060
gb|DT635114.1|DT635114 EST1150045 Normalized pine embryo li... 230 9e-060
gb|BF777299.1|BF777299 NXSI_067_E06_F NXSI (Nsf Xylem Side ... 230 1e-059
gb|CF667184.1|CF667184 RTCNT1_28_E02.g1_A029 Root control P... 227 8e-059
gb|BX680248.1|BX680248 BX680248 RS Pinus pinaster cDNA clon... 222 2e-057
gb|BG040817.1|BG040817 NXSI_115_D12_F NXSI (Nsf Xylem Side ... 211 4e-054
gb|CX714815.1|CX714815 RTPQ1_27_E03.b1_A032 Roots treated w... 204 5e-052
gb|DR689070.1|DR689070 EST1079156 Normalized pine embryo li... 196 2e-049
gb|DR012095.1|DR012095 HEAT1_10_D11.b1_A029 Root at 37 C fo... 194 5e-049
gb|DR168863.1|DR168863 RTPHOS1_28_H04.b1_A029 Roots minus p... 192 3e-048
gb|CF667097.1|CF667097 RTCNT1_28_E02.b1_A029 Root control P... 189 2e-047
gb|BE496277.1|BE496277 NXCI_022_B05_F NXCI (Nsf Xylem Compr... 187 1e-046
gb|BX682672.1|BX682672 BX682672 Pinus pinaster differenciat... 182 4e-045
gb|DR012421.1|DR012421 HEAT1_12_E11.g1_A029 Root at 37 C fo... 181 7e-045
gb|CO172808.1|CO172808 NDL1_32_B08.b1_A029 Needles control ... 176 2e-043
gb|CF472533.1|CF472533 RTDS1_10_E04.b1_A015 Drought-stresse... 173 1e-042
gb|BQ633914.1|BQ633914 NXRV062_D05_F NXRV (Nsf Xylem Root w... 161 4e-039
gb|BG275270.1|BG275270 NXSI_138_F04_F NXSI (Nsf Xylem Side ... 161 6e-039
gb|AI784911.1|AI784911 1274 PtIFG2 Pinus taeda cDNA clone 9... 156 1e-037
gb|BQ698581.1|BQ698581 NXPV_071_F06_F NXPV (Nsf Xylem Plani... 151 6e-036
gb|CD027980.1|CD027980 NXNV_143_C09_F Nsf Xylem Normal wood... 148 6e-035
gb|BF609659.1|BF609659 NXSI_047_G06_F NXSI (Nsf Xylem Side ... 146 2e-034
gb|AA739764.1|AA739764 529 PtIFG2 Pinus taeda cDNA clone 88... 145 4e-034
gb|AA739890.1|AA739890 655 PtIFG2 Pinus taeda cDNA clone 90... 142 3e-033
gb|AI725054.1|AI725054 953 PtIFG2 Pinus taeda cDNA clone 88... 119 7e-033
gb|BE758746.1|BE758746 NXCI_060_E06_F NXCI (Nsf Xylem Compr... 125 3e-028
gb|BE123630.1|BE123630 NXNV_146_H12_F Nsf Xylem Normal wood... 121 6e-027
gb|BE241224.1|BE241224 NXNV_180_G04_F Nsf Xylem Normal wood... 121 8e-027
gb|BE643949.1|BE643949 NXCI_050_E12_F NXCI (Nsf Xylem Compr... 115 5e-025
gb|CD021455.1|CD021455 NXNV_145_A10_F Nsf Xylem Normal wood... 111 5e-024
>gb|BX254201.1|BX254201 BX254201 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP094G06, mRNA sequence
Length = 677
Score = 255 bits (551), Expect = 3e-067
Identities = 105/132 (79%), Positives = 121/132 (91%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 90 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 269
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 270 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 449
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 450 TLIKRELSKLKK 485
Score = 160 bits (344), Expect = 1e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 487 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 308
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 307 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 128
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 127 RPISIKRLKGMVA 89
>gb|CR354638.1|CR354638 CR354638 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 124C07, mRNA sequence
Length = 638
Score = 255 bits (551), Expect = 3e-067
Identities = 105/132 (79%), Positives = 121/132 (91%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 92 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 271
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 272 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 451
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 452 TLIKRELSKLKK 487
Score = 160 bits (344), Expect = 1e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / -3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 489 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 310
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 309 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 130
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 129 RPISIKRLKGMVA 91
>gb|CR354740.1|CR354740 CR354740 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125G11, mRNA sequence
Length = 631
Score = 255 bits (551), Expect = 3e-067
Identities = 105/132 (79%), Positives = 121/132 (91%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 90 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 269
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 270 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 449
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 450 TLIKRELSKLKK 485
Score = 160 bits (344), Expect = 1e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 487 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 308
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 307 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 128
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 127 RPISIKRLKGMVA 89
>gb|BQ290460.1|BQ290460 NXRV046_E07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV046_E07 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 254 bits (549), Expect = 6e-067
Identities = 104/134 (77%), Positives = 122/134 (91%)
Frame = +3 / +1
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
+ A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLT
Sbjct: 43 SXATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLT 222
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIK
Sbjct: 223 DIKIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIK 402
Query: 429 RGGAIRQELAKLKK 470
RG I++EL+KLKK
Sbjct: 403 RGTLIKRELSKLKK 444
Score = 160 bits (344), Expect = 1e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 446 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 267
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 266 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 87
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 86 RPISIKRLKGMVA 48
>gb|CX714968.1|CX714968 RTPQ1_28_E12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_28_E12_A032 5', mRNA sequence
Length = 847
Score = 253 bits (548), Expect = 8e-067
Identities = 104/132 (78%), Positives = 121/132 (91%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 42 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 221
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 222 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 401
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 402 TLIKRELSKLKK 437
Score = 160 bits (344), Expect = 1e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 439 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 260
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 259 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 80
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 79 RPISIKRLKGMVA 41
>gb|DR081240.1|DR081240 RTFEPL1_28_G08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_G08_A029 3', mRNA sequence
Length = 669
Score = 253 bits (548), Expect = 8e-067
Identities = 104/132 (78%), Positives = 121/132 (91%)
Frame = +3 / -3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 529 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 350
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 349 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 170
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 169 TLIKRELSKLKK 134
Score = 160 bits (344), Expect = 1e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / +3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 132 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 311
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 312 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 491
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 492 RPISIKRLKGMVA 530
>gb|DR386241.1|DR386241 RTHG1_13_G06.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G06_A029 5', mRNA sequence
Length = 713
Score = 253 bits (548), Expect = 8e-067
Identities = 104/132 (78%), Positives = 121/132 (91%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 15 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 194
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 195 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 374
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 375 TLIKRELSKLKK 410
Score = 160 bits (344), Expect = 1e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 412 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 233
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 232 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 53
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 52 RPISIKRLKGMVA 14
>gb|BQ698941.1|BQ698941 NXRV117_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV117_D04 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 512
Score = 251 bits (543), Expect = 4e-066
Identities = 103/131 (78%), Positives = 120/131 (91%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 51 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 230
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 231 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 410
Query: 435 GAIRQELAKLK 467
I++EL+KLK
Sbjct: 411 TLIKRELSKLK 443
Score = 161 bits (347), Expect = 4e-039
Identities = 78/132 (59%), Positives = 89/132 (67%)
Frame = -3 / -2
Query: 469 FLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIR 290
F SL SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I+
Sbjct: 445 FFSLESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIK 266
Query: 289 VVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATR 110
F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RATR
Sbjct: 265 TFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATR 86
Query: 109 PISTNLLNGILA 74
PIS L G++A
Sbjct: 85 PISIKRLKGMVA 50
>gb|BQ701629.1|BQ701629 NXSI_111_G08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_111_G08 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 541
Score = 251 bits (542), Expect = 5e-066
Identities = 103/132 (78%), Positives = 120/132 (90%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 48 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 227
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIK G
Sbjct: 228 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKXG 407
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 408 TLIKRELSKLKK 443
Score = 158 bits (339), Expect = 5e-038
Identities = 76/133 (57%), Positives = 88/133 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ P LI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 445 SFFSFESSRLMSVPXLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 266
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 265 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 86
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 85 RPISIKRLKGMVA 47
>gb|CF670058.1|CF670058 RTCNT1_47_G09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_G09_A029 5', mRNA sequence
Length = 730
Score = 251 bits (542), Expect = 5e-066
Identities = 109/152 (71%), Positives = 124/152 (81%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 116 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 295
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 296 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 475
Query: 441 IRQELAKLKKASTA*GVSFRECHVRVFGYELD 536
I++EL+KLKK + * + C E D
Sbjct: 476 IKRELSKLKKENPV*E*FLKYCFYSFLFLETD 571
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 507 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 328
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 327 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 148
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 147 RPIST*RLKGMMS 109
>gb|BQ290949.1|BQ290949 NXRV051_G01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV051_G01 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 536
Score = 250 bits (541), Expect = 7e-066
Identities = 103/132 (78%), Positives = 119/132 (90%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 49 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 228
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 229 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 408
Query: 435 GAIRQELAKLKK 470
I++EL LKK
Sbjct: 409 TLIKRELXXLKK 444
Score = 158 bits (340), Expect = 4e-038
Identities = 76/133 (57%), Positives = 88/133 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 446 SFFXXXSSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 267
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 266 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 87
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 86 RPISIKRLKGMVA 48
>gb|AI812834.1|AI812834 19H3 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 573
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 34 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 213
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 214 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 393
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 394 IKRELSKLKKENPV*E*FLKYC 459
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 425 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 246
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 245 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 66
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 65 RPIST*RLKGMMS 27
>gb|AL750924.1|AL750924 AL750924 RS Pinus pinaster cDNA clone RS02A09 similar to RP L14,
mRNA sequence
Length = 596
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 112 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 291
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 292 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 471
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 472 IKRELSKLKKENPV*E*FLKYC 537
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 503 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 324
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 323 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 144
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 143 RPIST*RLKGMMS 105
>gb|AL751075.1|AL751075 AL751075 RS Pinus pinaster cDNA clone RS03G08 similar to RP L14,
mRNA sequence
Length = 605
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 102 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 281
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 282 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 461
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 462 IKRELSKLKKENPV*E*FLKYC 527
Score = 159 bits (341), Expect = 3e-038
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 493 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 314
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 313 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 134
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 133 RPIST*RLKGMMS 95
>gb|BX249075.1|BX249075 BX249075 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP015C05 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 651
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 107 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 286
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 287 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 466
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 467 IKRELSKLKKENPV*E*FLKYC 532
Score = 159 bits (341), Expect = 3e-038
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 498 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 319
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 318 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 139
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 138 RPIST*RLKGMMS 100
>gb|BX249530.1|BX249530 BX249530 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP025B05 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 673
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 161 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 340
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 341 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 520
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 521 IKRELSKLKKENPV*E*FLKYC 586
Score = 159 bits (341), Expect = 3e-038
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 552 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 373
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 372 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 193
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 192 RPIST*RLKGMMS 154
>gb|BX253410.1|BX253410 BX253410 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP083B09 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 688
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 75 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 254
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 255 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 434
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 435 IKRELSKLKKENPV*E*FLKYC 500
Score = 159 bits (341), Expect = 3e-038
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 466 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 287
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 286 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 107
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 106 RPIST*RLKGMMS 68
>gb|BX253827.1|BX253827 BX253827 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP089B08 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 686
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 467
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 468 IKRELSKLKKENPV*E*FLKYC 533
Score = 159 bits (341), Expect = 3e-038
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 499 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 320
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 319 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 140
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 139 RPIST*RLKGMMS 101
>gb|BG040720.1|BG040720 NXSI_114_C09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_114_C09 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 537
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 33 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 212
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 213 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 392
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 393 IKRELSKLKKENPV*E*FLKYC 458
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 424 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 245
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 244 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 65
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 64 RPIST*RLKGMMS 26
>gb|BQ703180.1|BQ703180 NXSI_137_E12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_137_E12 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 539
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 33 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 212
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 213 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 392
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 393 IKRELSKLKKENPV*E*FLKYC 458
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 424 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 245
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 244 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 65
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 64 RPIST*RLKGMMS 26
>gb|CF472547.1|CF472547 RTDS1_10_E04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_E04_A015 5', mRNA sequence
Length = 772
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 160 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 339
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 340 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 519
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 520 IKRELSKLKKENPV*E*FLKYC 585
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / -3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 551 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 372
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 371 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 192
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 191 RPIST*RLKGMMS 153
>gb|CF476158.1|CF476158 RTWW2_21_H04.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_21_H04_A021 5', mRNA sequence
Length = 767
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 79 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 258
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 259 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 438
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 439 IKRELSKLKKENPV*E*FLKYC 504
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 470 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 291
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 290 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 111
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 110 RPIST*RLKGMMS 72
>gb|CF669131.1|CF669131 RTCNT1_40_G09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_40_G09_A029 5', mRNA sequence
Length = 755
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 145 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 324
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 325 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 504
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 505 IKRELSKLKKENPV*E*FLKYC 570
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 536 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 357
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 356 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 177
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 176 RPIST*RLKGMMS 138
>gb|BX681751.1|BX681751 BX681751 RS Pinus pinaster cDNA clone RS63H06, mRNA sequence
Length = 601
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 23 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 202
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 203 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 382
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 383 IKRELSKLKKENPV*E*FLKYC 448
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 414 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 235
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 234 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 55
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 54 RPIST*RLKGMMS 16
>gb|CR392451.1|CR392451 CR392451 RN Pinus pinaster cDNA clone RN32C02, mRNA sequence
Length = 537
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 112 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 291
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 292 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 471
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 472 IKRELSKLKKENPV*E*FLKYC 537
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 503 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 324
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 323 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 144
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 143 RPIST*RLKGMMS 105
>gb|CX651979.1|CX651979 COLD1_56_D01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_D01_A029 3', mRNA sequence
Length = 693
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / -2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 572 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 393
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 392 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 213
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 212 IKRELSKLKKENPV*E*FLKYC 147
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / +1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 181 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 360
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 361 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 540
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 541 RPIST*RLKGMMS 579
>gb|CX652049.1|CX652049 COLD1_56_D01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_D01_A029 5', mRNA sequence
Length = 762
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / -1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 654 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 475
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 474 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 295
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 294 IKRELSKLKKENPV*E*FLKYC 229
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / +2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 263 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 442
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 443 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 622
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 623 RPIST*RLKGMMS 661
>gb|DR012165.1|DR012165 HEAT1_10_D11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_10_D11_A029 5', mRNA sequence
Length = 775
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 240 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 419
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 420 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 599
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 600 IKRELSKLKKENPV*E*FLKYC 665
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 631 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 452
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 451 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 272
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 271 RPIST*RLKGMMS 233
>gb|DR119433.1|DR119433 RTMG1_23_F01.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_F01_A029 3', mRNA sequence
Length = 762
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 54 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 233
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 234 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 413
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 414 IKRELSKLKKENPV*E*FLKYC 479
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / -3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 445 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 266
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 265 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 86
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 85 RPIST*RLKGMMS 47
>gb|DR119514.1|DR119514 RTMG1_23_F01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_F01_A029 5', mRNA sequence
Length = 770
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 122 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 301
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 302 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 481
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 482 IKRELSKLKKENPV*E*FLKYC 547
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / -3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 513 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 334
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 333 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 154
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 153 RPIST*RLKGMMS 115
>gb|DR687844.1|DR687844 EST1077927 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX25 3' end, mRNA sequence
Length = 841
Score = 250 bits (540), Expect = 1e-065
Identities = 102/129 (79%), Positives = 119/129 (92%)
Frame = +3 / +3
Query: 84 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKID 263
PF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDIKID
Sbjct: 159 PFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDIKID 338
Query: 264 IKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAI 443
I +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG I
Sbjct: 339 IPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLI 518
Query: 444 RQELAKLKK 470
++EL+KLKK
Sbjct: 519 KRELSKLKK 545
Score = 157 bits (338), Expect = 7e-038
Identities = 76/130 (58%), Positives = 86/130 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 547 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 368
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 367 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 188
Query: 112 RPISTNLLNG 83
RPIS L G
Sbjct: 187 RPISIKRLKG 158
>gb|DR742542.1|DR742542 RTCU1_4_G11.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_4_G11_A029 5', mRNA sequence
Length = 806
Score = 250 bits (540), Expect = 1e-065
Identities = 107/142 (75%), Positives = 122/142 (85%)
Frame = +3 / -3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 714 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 535
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 534 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 355
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 354 IKRELSKLKKENPV*E*FLKYC 289
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / +2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 323 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 502
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 503 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 682
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 683 RPIST*RLKGMMS 721
>gb|DT634364.1|DT634364 EST1149295 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG518 3' end, mRNA sequence
Length = 803
Score = 250 bits (540), Expect = 1e-065
Identities = 102/129 (79%), Positives = 119/129 (92%)
Frame = +3 / +2
Query: 84 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKID 263
PF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDIKID
Sbjct: 167 PFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDIKID 346
Query: 264 IKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAI 443
I +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG I
Sbjct: 347 IPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLI 526
Query: 444 RQELAKLKK 470
++EL+KLKK
Sbjct: 527 KRELSKLKK 553
Score = 157 bits (338), Expect = 7e-038
Identities = 76/130 (58%), Positives = 86/130 (66%)
Frame = -3 / -3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 555 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 376
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 375 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 196
Query: 112 RPISTNLLNG 83
RPIS L G
Sbjct: 195 RPISIKRLKG 166
>gb|BX681807.1|BX681807 BX681807 RS Pinus pinaster cDNA clone RS65B08, mRNA sequence
Length = 522
Score = 249 bits (539), Expect = 1e-065
Identities = 105/130 (80%), Positives = 118/130 (90%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 467
Query: 441 IRQELAKLKK 470
I++EL+KLKK
Sbjct: 468 IKRELSKLKK 497
Score = 160 bits (345), Expect = 8e-039
Identities = 80/133 (60%), Positives = 91/133 (68%)
Frame = -3 / -3
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 499 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 320
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 319 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 140
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 139 RPIST*RLKGMMS 101
>gb|DR096714.1|DR096714 STRR1_29_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_29_G01_A033 5', mRNA sequence
Length = 708
Score = 249 bits (539), Expect = 1e-065
Identities = 103/132 (78%), Positives = 120/132 (90%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 2 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 181
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 182 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 361
Query: 435 GAIRQELAKLKK 470
I++EL+ LKK
Sbjct: 362 TLIKRELS*LKK 397
Score = 160 bits (343), Expect = 2e-038
Identities = 77/133 (57%), Positives = 89/133 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 399 SFFSYESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 220
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 219 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 40
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 39 RPISIKRLKGMVA 1
>gb|BQ702611.1|BQ702611 NXSI_130_E08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_130_E08 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 479
Score = 248 bits (537), Expect = 3e-065
Identities = 102/131 (77%), Positives = 119/131 (90%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 60 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 239
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 240 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 419
Query: 435 GAIRQELAKLK 467
I++EL+ LK
Sbjct: 420 TLIKRELSXLK 452
Score = 159 bits (342), Expect = 2e-038
Identities = 77/132 (58%), Positives = 88/132 (66%)
Frame = -3 / -2
Query: 469 FLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIR 290
F S SS L++ PLLI ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I+
Sbjct: 454 FFSXESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIK 275
Query: 289 VVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATR 110
F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RATR
Sbjct: 274 TFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATR 95
Query: 109 PISTNLLNGILA 74
PIS L G++A
Sbjct: 94 PISIKRLKGMVA 59
>gb|CF666732.1|CF666732 RTCNT1_25_E11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_25_E11_A029 5', mRNA sequence
Length = 727
Score = 248 bits (537), Expect = 3e-065
Identities = 106/142 (74%), Positives = 122/142 (85%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDI+I
Sbjct: 140 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIRI 319
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 320 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 499
Query: 441 IRQELAKLKKASTA*GVSFREC 506
I++EL+KLKK + * + C
Sbjct: 500 IKRELSKLKKENPV*E*FLKYC 565
Score = 161 bits (346), Expect = 6e-039
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F +L SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I
Sbjct: 531 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 352
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 351 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 172
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 171 RPIST*RLKGMMS 133
>gb|BQ701872.1|BQ701872 NXSI_121_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_F01 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 552
Score = 248 bits (536), Expect = 4e-065
Identities = 102/132 (77%), Positives = 119/132 (90%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 58 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 237
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKI G
Sbjct: 238 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIXXG 417
Query: 435 GAIRQELAKLKK 470
I++EL+KLKK
Sbjct: 418 TLIKRELSKLKK 453
Score = 155 bits (334), Expect = 3e-037
Identities = 75/133 (56%), Positives = 87/133 (65%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F S SS L++ P I ASM LN SKS + AL F TI+F PHEL SHL TSA+S+A I
Sbjct: 455 SFFSFESSRLMSVPXXILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 276
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RAT
Sbjct: 275 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 96
Query: 112 RPISTNLLNGILA 74
RPIS L G++A
Sbjct: 95 RPISIKRLKGMVA 57
>gb|AA556860.1|AA556860 702 Loblolly pine C Pinus taeda cDNA clone 6C7E, mRNA sequence
Length = 589
Score = 244 bits (528), Expect = 5e-064
Identities = 103/130 (79%), Positives = 116/130 (89%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 96 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 275
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKI +G
Sbjct: 276 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIXKGXL 455
Query: 441 IRQELAKLKK 470
I +EL+KLKK
Sbjct: 456 IXRELSKLKK 485
Score = 154 bits (331), Expect = 7e-037
Identities = 77/133 (57%), Positives = 88/133 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS I+ P I ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 487 SFFNFESSRXISXPFXILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 308
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 307 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 128
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 127 RPIST*RLKGMMS 89
>gb|BG039583.1|BG039583 NXSI_100_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_100_F06 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 500
Score = 244 bits (527), Expect = 6e-064
Identities = 100/131 (76%), Positives = 117/131 (89%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 37 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 216
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
KIDI +VPKK LI+ ME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKI G
Sbjct: 217 KIDIPKVPKKKVLIEXMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIXXG 396
Query: 435 GAIRQELAKLK 467
I++EL+KLK
Sbjct: 397 TLIKRELSKLK 429
Score = 153 bits (329), Expect = 1e-036
Identities = 74/132 (56%), Positives = 85/132 (64%)
Frame = -3 / -1
Query: 469 FLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIR 290
F S SS L++ P I ASM LN SKS + AL F TI+F PHEL SHL TSA+S+ I+
Sbjct: 431 FFSFESSRLMSVPXXILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMXSIK 252
Query: 289 VVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATR 110
F GT +SIL+SVSES LKF WHLTI GAST A FW P*S P* RATR
Sbjct: 251 TFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATR 72
Query: 109 PISTNLLNGILA 74
PIS L G++A
Sbjct: 71 PISIKRLKGMVA 36
>gb|CO172881.1|CO172881 NDL1_32_B08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_32_B08_A029 5', mRNA sequence
Length = 767
Score = 241 bits (520), Expect = 6e-063
Identities = 104/138 (75%), Positives = 118/138 (85%)
Frame = +3 / +3
Query: 93 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKR 272
R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKIDI R
Sbjct: 3 RYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKIDIPR 182
Query: 273 VPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 452
VPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG I++E
Sbjct: 183 VPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLIKRE 362
Query: 453 LAKLKKASTA*GVSFREC 506
L+KLKK + * + C
Sbjct: 363 LSKLKKENPV*E*FLKYC 416
Score = 157 bits (337), Expect = 1e-037
Identities = 78/125 (62%), Positives = 86/125 (68%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 382 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 203
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 202 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 23
Query: 112 RPIST 98
RPIST
Sbjct: 22 RPIST 8
>gb|BG275750.1|BG275750 NXSI_145_E05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_145_E05 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 509
Score = 239 bits (517), Expect = 1e-062
Identities = 101/129 (78%), Positives = 114/129 (88%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIK G
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKXGTL 467
Query: 441 IRQELAKLK 467
I++EL+ K
Sbjct: 468 IKRELSXXK 494
Score = 154 bits (330), Expect = 9e-037
Identities = 77/127 (60%), Positives = 87/127 (68%)
Frame = -3 / -2
Query: 454 SSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLG 275
SS LI+ P LI ASM LNLSKS + AL F TI+F PHELFSHL TSA S+A I+ F G
Sbjct: 481 SSRLISVPXLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFG 302
Query: 274 TRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTN 95
T MSIL+SVSES LKF LTI GAST+A FW P*S P* TRATRPIST
Sbjct: 301 TLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST* 122
Query: 94 LLNGILA 74
L G+++
Sbjct: 121 RLKGMMS 101
>gb|CR392154.1|CR392154 CR392154 RN Pinus pinaster cDNA clone RN27C03, mRNA sequence
Length = 483
Score = 238 bits (515), Expect = 3e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 110 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 289
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 290 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 469
Query: 441 IRQE 452
I++E
Sbjct: 470 IKRE 481
Score = 157 bits (338), Expect = 7e-038
Identities = 79/127 (62%), Positives = 88/127 (69%)
Frame = -3 / -1
Query: 454 SSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLG 275
SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I+ F G
Sbjct: 483 SSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFG 304
Query: 274 TRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTN 95
T MSIL+SVSES LKF LTI GAST+A FW P*S P* TRATRPIST
Sbjct: 303 TLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST* 124
Query: 94 LLNGILA 74
L G+++
Sbjct: 123 RLKGMMS 103
>gb|BM492300.1|BM492300 NXRV_024_C12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_024_C12 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 538
Score = 236 bits (510), Expect = 1e-061
Identities = 99/123 (80%), Positives = 111/123 (90%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 170 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 349
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 350 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 529
Query: 441 IRQ 449
I++
Sbjct: 530 IKR 538
Score = 155 bits (333), Expect = 4e-037
Identities = 77/124 (62%), Positives = 86/124 (69%)
Frame = -3 / -2
Query: 445 LIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRL 266
LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I+ F GT
Sbjct: 534 LISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLG 355
Query: 265 MSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLN 86
MSIL+SVSES LKF LTI GAST+A FW P*S P* TRATRPIST L
Sbjct: 354 MSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLK 175
Query: 85 GILA 74
G+++
Sbjct: 174 GMMS 163
>gb|CX714867.1|CX714867 RTPQ1_27_E03.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_27_E03_A032 5', mRNA sequence
Length = 427
Score = 236 bits (509), Expect = 2e-061
Identities = 99/122 (81%), Positives = 110/122 (90%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 62 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 241
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 242 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 421
Query: 441 IR 446
I+
Sbjct: 422 IK 427
Score = 155 bits (333), Expect = 4e-037
Identities = 77/124 (62%), Positives = 86/124 (69%)
Frame = -3 / -2
Query: 445 LIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRL 266
LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I+ F GT
Sbjct: 426 LISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLG 247
Query: 265 MSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLN 86
MSIL+SVSES LKF LTI GAST+A FW P*S P* TRATRPIST L
Sbjct: 246 MSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLK 67
Query: 85 GILA 74
G+++
Sbjct: 66 GMMS 55
>gb|AW870058.1|AW870058 NXNV_123_E12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_123_E12 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 384
Score = 230 bits (497), Expect = 9e-060
Identities = 97/124 (78%), Positives = 109/124 (87%)
Frame = +3 / +2
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 8 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 187
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LND +RFK+MLA IK G
Sbjct: 188 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDXERFKIMLAXIKXGXL 367
Query: 441 IRQE 452
I++E
Sbjct: 368 IKRE 379
Score = 150 bits (322), Expect = 1e-035
Identities = 76/126 (60%), Positives = 85/126 (67%)
Frame = -3 / -1
Query: 451 SCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGT 272
S LI+ P LI ASM LNLS S + AL F TI+F PHELFSHL TSA SIA I+ F GT
Sbjct: 378 SRLISXPXLIXASMILNLSXSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGT 199
Query: 271 RLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNL 92
MSIL+SVSES LKF LTI GAST+A FW P*S P* TRATRPIST
Sbjct: 198 LGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*R 19
Query: 91 LNGILA 74
L G+++
Sbjct: 18 LKGMMS 1
>gb|DT635114.1|DT635114 EST1150045 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGD33 3' end, mRNA sequence
Length = 836
Score = 230 bits (497), Expect = 9e-060
Identities = 97/117 (82%), Positives = 106/117 (90%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 484 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 663
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 431
DI RVPKK LI AME A V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKR
Sbjct: 664 DIPRVPKKKVLIDAMESAKVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKR 834
Score = 148 bits (317), Expect = 6e-035
Identities = 73/120 (60%), Positives = 82/120 (68%)
Frame = -3 / -1
Query: 433 PLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSIL 254
PLLI ASM LNLSKS + AL F TI+F PHELFSHL T A S+A I+ F GT MSIL
Sbjct: 836 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TFADSMASIKTFFFGTLGMSIL 657
Query: 253 MSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
+SVSES LKF LTI GAST+A FW P*S P* TRATRPIST L G+++
Sbjct: 656 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 477
>gb|BF777299.1|BF777299 NXSI_067_E06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_067_E06 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 515
Score = 230 bits (496), Expect = 1e-059
Identities = 98/130 (75%), Positives = 110/130 (84%)
Frame = +3 / +3
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 105 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 284
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI AME A+V+ +WENS WG+KLIVQK RA LN F +ML KIKRG
Sbjct: 285 DIPRVPKKKVLIDAMESAEVQKRWENSXWGRKLIVQKXRAELNXXXXFXIMLXKIKRGTL 464
Query: 441 IRQELAKLKK 470
I++EL+KLKK
Sbjct: 465 IKRELSKLKK 494
Score = 148 bits (317), Expect = 6e-035
Identities = 74/133 (55%), Positives = 85/133 (63%)
Frame = -3 / -2
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI SM N S + AL F TI+F PH LFSHL TSA SIA I
Sbjct: 496 SFFNFESSRLISVPLLILXSMXXNXXXSFNSALXFCTINFRPHXLFSHLF*TSADSIASI 317
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRAT 113
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TRAT
Sbjct: 316 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 137
Query: 112 RPISTNLLNGILA 74
RPIST L G+++
Sbjct: 136 RPIST*RLKGMMS 98
>gb|CF667184.1|CF667184 RTCNT1_28_E02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_28_E02_A029 5', mRNA sequence
Length = 619
Score = 227 bits (490), Expect = 8e-059
Identities = 95/115 (82%), Positives = 105/115 (91%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 274 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 453
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 425
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKI
Sbjct: 454 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKI 618
Score = 145 bits (311), Expect = 4e-034
Identities = 72/117 (61%), Positives = 80/117 (68%)
Frame = -3 / -3
Query: 424 IFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSV 245
I ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I+ F GT MSIL+SV
Sbjct: 617 ILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSILISV 438
Query: 244 SESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
SES LKF LTI GAST+A FW P*S P* TRATRPIST L G+++
Sbjct: 437 SESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 267
>gb|BX680248.1|BX680248 BX680248 RS Pinus pinaster cDNA clone RS41B10, mRNA sequence
Length = 616
Score = 222 bits (480), Expect = 2e-057
Identities = 96/129 (74%), Positives = 109/129 (84%)
Frame = +3 / +3
Query: 120 LVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKTTLIK 299
LVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKIDI RVPKK LI
Sbjct: 39 LVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKIDIPRVPKKKVLID 218
Query: 300 AMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKAST 479
AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG I++EL+KLKK +
Sbjct: 219 AMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTLIKRELSKLKKENP 398
Query: 480 A*GVSFREC 506
* + C
Sbjct: 399 V*E*FLKYC 425
Score = 139 bits (299), Expect = 2e-032
Identities = 71/118 (60%), Positives = 79/118 (66%)
Frame = -3 / -1
Query: 472 AFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALI 293
+F + SS LI+ PLLI ASM LNLSKS + AL F TI+F PHELFSHL TSA SIA I
Sbjct: 391 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 212
Query: 292 RVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTR 119
+ F GT MSIL+SVSES LKF LTI GAST+A FW P*S P* TR
Sbjct: 211 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTR 38
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 380,168,055
Number of Sequences: 355925
Number of extensions: 5009173
Number of successful extensions: 35789
Number of sequences better than 1.0e-020: 106
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11484458385
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)