TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738959.2.3
(725 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus ad... 191 1e-064
gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus cal... 191 1e-064
gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus add... 192 4e-064
gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus... 192 4e-064
gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus... 189 4e-064
gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus ad... 192 4e-064
gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus pota... 192 4e-064
gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciat... 192 4e-064
gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciat... 192 4e-064
gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo li... 192 4e-064
gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pin... 191 8e-064
gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pin... 181 1e-061
gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus add... 99 1e-059
gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus... 192 4e-059
gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pin... 192 4e-059
gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus ni... 173 2e-058
gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control P... 97 4e-058
gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine r... 171 6e-058
gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compr... 164 2e-056
gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus... 192 2e-055
gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus... 192 2e-055
gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus ni... 192 2e-055
gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus pota... 188 3e-054
gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo li... 155 3e-053
gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus pota... 188 5e-053
gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compr... 144 2e-050
gb|CV036174.1|CV036174 RTNACL1_57_F03.b1_A029 Roots plus ad... 189 2e-050
gb|BF777810.1|BF777810 NXSI_075_H12_F NXSI (Nsf Xylem Side ... 192 1e-049
gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus pota... 154 2e-048
gb|CX652950.1|CX652950 COLD1_62_B04.g1_A029 Root cold Pinus... 192 2e-048
gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus ad... 154 1e-047
gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo li... 154 2e-047
gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pin... 135 4e-047
gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciat... 134 6e-047
gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compr... 149 6e-047
gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Re... 149 8e-047
gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Re... 149 8e-047
gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response R... 149 8e-047
gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo li... 149 8e-047
gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nit... 149 8e-047
gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added... 149 8e-047
gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered lo... 149 8e-047
gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciat... 149 8e-047
gb|BE643911.1|BE643911 NXCI_048_H08_F NXCI (Nsf Xylem Compr... 168 3e-046
gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus add... 130 1e-045
gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root ... 142 9e-045
gb|CV032286.1|CV032286 RTNACL1_7_D03.b1_A029 Roots plus add... 180 1e-044
gb|CX646066.1|CX646066 COLD1_7_C08.b1_A029 Root cold Pinus ... 180 1e-044
gb|DR069646.1|DR069646 RTDK1_8_C04.g1_A029 Roots, dark Pinu... 180 1e-044
gb|BG275186.1|BG275186 NXSI_140_H02_F NXSI (Nsf Xylem Side ... 117 9e-042
gb|AW784129.1|AW784129 NXNV_103_E03_F Nsf Xylem Normal wood... 115 3e-041
gb|BQ654839.1|BQ654839 NXRV086_D03_F NXRV (Nsf Xylem Root w... 154 5e-041
gb|BE241113.1|BE241113 NXNV_173_A08_F Nsf Xylem Normal wood... 116 1e-040
gb|BQ696029.1|BQ696029 NXPV_035_F01_F NXPV (Nsf Xylem Plani... 111 5e-040
gb|DR079740.1|DR079740 RTFEPL1_17_F12.b1_A029 Roots plus ad... 149 1e-039
gb|BX255109.1|BX255109 BX255109 Pinus pinaster differenciat... 107 1e-039
gb|AW758685.1|AW758685 NXNV_085_C06_F Nsf Xylem Normal wood... 108 5e-039
gb|BF610263.1|BF610263 NXSI_057_B05_F NXSI (Nsf Xylem Side ... 105 5e-039
gb|BQ698583.1|BQ698583 NXPV_071_F08_F NXPV (Nsf Xylem Plani... 107 8e-039
gb|BF518118.1|BF518118 NXSI_035_C02_F NXSI (Nsf Xylem Side ... 105 2e-038
gb|BG275851.1|BG275851 NXSI_148_F04_F NXSI (Nsf Xylem Side ... 105 4e-038
gb|BE049813.1|BE049813 NXNV_144_E12_F Nsf Xylem Normal wood... 158 5e-038
gb|AW888189.1|AW888189 NXNV_105_F12_F Nsf Xylem Normal wood... 145 5e-037
gb|DR081398.1|DR081398 RTFEPL1_29_G11.b1_A029 Roots plus ad... 152 2e-036
gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo li... 114 2e-036
gb|DR094453.1|DR094453 STRR1_14_E02.g1_A033 Stem Response R... 97 8e-036
gb|AI813092.1|AI813092 20F12 Pine Lambda Zap Xylem library ... 149 2e-035
gb|DR023386.1|DR023386 STRS1_57_F01.b1_A034 Shoot tip pitch... 149 2e-035
gb|DR092087.1|DR092087 RTAL1_26_E11.b1_A029 Roots plus adde... 149 2e-035
gb|DR072584.1|DR072584 RTDK1_27_F10.b1_A029 Roots, dark Pin... 148 5e-035
gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciat... 104 2e-033
gb|CO158653.1|CO158653 FLD1_8_G04.b1_A029 Root flooded Pinu... 141 4e-033
gb|AW758792.1|AW758792 NXNV_089_G04_F Nsf Xylem Normal wood... 127 4e-031
gb|CO168704.1|CO168704 NDL1_2_A02.b1_A029 Needles control P... 133 1e-030
gb|CF479423.1|CF479423 RTWW3_22_G10.b1_A022 Well-watered lo... 133 2e-030
gb|DR682084.1|DR682084 EST1072159 Normalized pine embryo li... 133 2e-030
gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Plani... 93 4e-030
gb|DR385918.1|DR385918 RTHG1_11_D11.g1_A029 Roots plus adde... 60 1e-029
gb|BE049816.1|BE049816 NXNV_144_F06_F Nsf Xylem Normal wood... 130 1e-029
gb|BM133194.1|BM133194 NXLV_001_D11_F NXLV (Nsf Xylem Late ... 125 3e-028
gb|BM427736.1|BM427736 NXRV_002_E07_F NXRV (Nsf Xylem Root ... 123 1e-027
gb|DR022670.1|DR022670 STRS1_52_E04.g1_A034 Shoot tip pitch... 122 3e-027
gb|BG040600.1|BG040600 NXSI_113_A01_F NXSI (Nsf Xylem Side ... 68 4e-027
gb|BF010728.1|BF010728 NXCI_066_G06_F NXCI (Nsf Xylem Compr... 120 1e-026
gb|DR022522.1|DR022522 STRS1_51_E04.g1_A034 Shoot tip pitch... 118 3e-026
gb|DR022603.1|DR022603 STRS1_52_E04.b1_A034 Shoot tip pitch... 114 6e-025
gb|DR069574.1|DR069574 RTDK1_8_C04.b1_A029 Roots, dark Pinu... 59 1e-024
gb|DT631983.1|DT631983 EST1146914 Normalized pine embryo li... 74 2e-024
gb|BQ697709.1|BQ697709 NXPV_059_H07_F NXPV (Nsf Xylem Plani... 99 2e-024
gb|CD020793.1|CD020793 NXNV_089_E09_F Nsf Xylem Normal wood... 111 4e-024
gb|BQ697176.1|BQ697176 NXPV_050_D09_F NXPV (Nsf Xylem Plani... 62 2e-023
gb|CO200454.1|CO200454 GEO2_7_C04.g1_A032 Root gravitropism... 54 5e-023
gb|CO367722.1|CO367722 RTK1_36_C12.b1_A029 Roots minus pota... 105 3e-022
gb|DR684272.1|DR684272 EST1074349 Normalized pine embryo li... 64 1e-021
gb|AW758854.1|AW758854 NXNV_091_G02_F Nsf Xylem Normal wood... 103 2e-021
>gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_D08_A029 3', mRNA sequence
Length = 855
Score = 191 bits (412), Expect(3) = 1e-064
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE VKELI TV M ENTPDDP
Sbjct: 214 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDP 393
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R+RKPDITKA +LGWEPK+ LR+GL LM +DFRERL V KK
Sbjct: 394 RKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERLGVSKK 519
Score = 128 bits (274), Expect(3) = 4e-040
Identities = 59/79 (74%), Positives = 64/79 (81%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR+ AFVMSGFL RGSSGVFS I TV I+SFT SASSS+VNSPGFP+ IGPV
Sbjct: 449 LGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASASSSIVNSPGFPRFIGPV 270
Query: 176 LFPFISLIRPSTISAT*QK 120
L P IS I+PSTIS T*QK
Sbjct: 269 LSPSISRIKPSTISET*QK 213
Score = 97.3 bits (206), Expect(3) = 9e-027
Identities = 45/99 (45%), Positives = 60/99 (60%)
Frame = -3 / -1
Query: 411 QALPEIILHEHQAVPQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGHRHCHIWVDQLLHIL 232
Q L E+ H+ PQ +L LPS+ LCDV PLA +I SV H + ++LLH
Sbjct: 504 QPLTEVFCHKW*PFPQSNLRLPSKKCCCLCDVWFPLAWIIWSVFNHLYSC*CFNKLLHSF 325
Query: 231 SKFQHGEFTWVPQVNRSSLVSIHQLNKTINHIGNIAENS 115
SKFQH + +W+ ++ R S++S H N TINHI NIAE S
Sbjct: 324 SKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEAS 208
Score = 47.8 bits (98), Expect(3) = 1e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 97 NTYGPRMNIDDGRVVSNFI 153
Score = 46.4 bits (95), Expect(3) = 1e-064
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQTRSF
Sbjct: 154 AQALRGEPMTVQAPGTQTRSF 216
Score = 38.2 bits (77), Expect(3) = 4e-040
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL VCVPG WTV GSP A*A
Sbjct: 218 QKLRVCVPGAWTVIGSPLRA*A 153
Score = 36.8 bits (74), Expect(3) = 4e-040
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 152 IKLLTTRPSSMFIRGP*VL 96
Score = 34.5 bits (69), Expect(3) = 9e-027
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 154 Q*NC*QHGHRQCSFVAHR 101
Score = 26.3 bits (51), Expect(3) = 9e-027
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 204 LCSWGLDSHWFTSKGLS 154
>gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_G10_A029 5', mRNA sequence
Length = 637
Score = 191 bits (412), Expect(3) = 1e-064
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +1 / -1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE VKELI TV M ENTPDDP
Sbjct: 487 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDP 308
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R+RKPDITKA +LGWEPK+ LR+GL LM +DFRERL V KK
Sbjct: 307 RKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERLGVSKK 182
Score = 128 bits (274), Expect(3) = 4e-040
Identities = 59/79 (74%), Positives = 64/79 (81%)
Frame = -1 / +3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR+ AFVMSGFL RGSSGVFS I TV I+SFT SASSS+VNSPGFP+ IGPV
Sbjct: 252 LGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASASSSIVNSPGFPRFIGPV 431
Query: 176 LFPFISLIRPSTISAT*QK 120
L P IS I+PSTIS T*QK
Sbjct: 432 LSPSISRIKPSTISET*QK 488
Score = 97.3 bits (206), Expect(3) = 9e-027
Identities = 45/99 (45%), Positives = 60/99 (60%)
Frame = -3 / +2
Query: 411 QALPEIILHEHQAVPQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGHRHCHIWVDQLLHIL 232
Q L E+ H+ PQ +L LPS+ LCDV PLA +I SV H + ++LLH
Sbjct: 197 QPLTEVFCHKW*PFPQSNLRLPSKKCCCLCDVWFPLAWIIWSVFNHLYSC*CFNKLLHSF 376
Query: 231 SKFQHGEFTWVPQVNRSSLVSIHQLNKTINHIGNIAENS 115
SKFQH + +W+ ++ R S++S H N TINHI NIAE S
Sbjct: 377 SKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEAS 493
Score = 47.8 bits (98), Expect(3) = 1e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 604 NTYGPRMNIDDGRVVSNFI 548
Score = 46.4 bits (95), Expect(3) = 1e-064
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3 / -1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQTRSF
Sbjct: 547 AQALRGEPMTVQAPGTQTRSF 485
Score = 38.2 bits (77), Expect(3) = 4e-040
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / +3
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL VCVPG WTV GSP A*A
Sbjct: 483 QKLRVCVPGAWTVIGSPLRA*A 548
Score = 36.8 bits (74), Expect(3) = 4e-040
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +3
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 549 IKLLTTRPSSMFIRGP*VL 605
Score = 34.5 bits (69), Expect(3) = 9e-027
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 547 Q*NC*QHGHRQCSFVAHR 600
Score = 26.3 bits (51), Expect(3) = 9e-027
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / +2
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 497 LCSWGLDSHWFTSKGLS 547
>gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E05_A029 3', mRNA sequence
Length = 868
Score = 192 bits (414), Expect(3) = 4e-064
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 160 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 339
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 340 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 465
Score = 131 bits (281), Expect(2) = 3e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 395 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 216
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 215 FSPSISLIRPSTMSET*QK 159
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 43 NTYGPRMNIDDGRVVSNFI 99
Score = 43.7 bits (89), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 100 AQALRGEELTVQAPGTQTRSF 162
Score = 37.3 bits (75), Expect(2) = 3e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 98 MKLLTTRPSSMFMRGP*VL 42
>gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 5', mRNA sequence
Length = 835
Score = 192 bits (414), Expect(3) = 4e-064
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 306 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 485
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 486 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 611
Score = 131 bits (281), Expect(2) = 3e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 541 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 362
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 361 FSPSISLIRPSTMSET*QK 305
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 189 NTYGPRMNIDDGRVVSNFI 245
Score = 43.7 bits (89), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 246 AQALRGEELTVQAPGTQTRSF 308
Score = 37.3 bits (75), Expect(2) = 3e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 244 MKLLTTRPSSMFMRGP*VL 188
>gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_H04_A029 3', mRNA sequence
Length = 791
Score = 189 bits (408), Expect(3) = 4e-064
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE VKE I TV M ENTPDDP
Sbjct: 286 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKEFIETSTTVEMVENTPDDP 465
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R+RKPDITKA +LGWEPK+ LR+GL LM +DFRERL V KK
Sbjct: 466 RKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERLGVSKK 591
Score = 130 bits (279), Expect(3) = 8e-041
Identities = 60/79 (75%), Positives = 64/79 (81%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR+ AFVMSGFL RGSSGVFS I TV INSFT SASSS+VNSPGFP+ IGPV
Sbjct: 521 LGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSINSFTASASSSIVNSPGFPRFIGPV 342
Query: 176 LFPFISLIRPSTISAT*QK 120
L P IS I+PSTIS T*QK
Sbjct: 341 LSPSISRIKPSTISET*QK 285
Score = 97.3 bits (206), Expect(3) = 9e-027
Identities = 45/99 (45%), Positives = 60/99 (60%)
Frame = -3 / -3
Query: 411 QALPEIILHEHQAVPQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGHRHCHIWVDQLLHIL 232
Q L E+ H+ PQ +L LPS+ LCDV PLA +I SV H + ++LLH
Sbjct: 576 QPLTEVFCHKW*PFPQSNLRLPSKKCCCLCDVWFPLAWIIWSVFNHLYSC*CFNKLLHSF 397
Query: 231 SKFQHGEFTWVPQVNRSSLVSIHQLNKTINHIGNIAENS 115
SKFQH + +W+ ++ R S++S H N TINHI NIAE S
Sbjct: 396 SKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEAS 280
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 169 NTYGPRMNIDDGRVVSNFI 225
Score = 46.4 bits (95), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQTRSF
Sbjct: 226 AQALRGEPMTVQAPGTQTRSF 288
Score = 38.2 bits (77), Expect(3) = 8e-041
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL VCVPG WTV GSP A*A
Sbjct: 290 QKLRVCVPGAWTVIGSPLRA*A 225
Score = 36.8 bits (74), Expect(3) = 8e-041
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 224 IKLLTTRPSSMFIRGP*VL 168
Score = 34.5 bits (69), Expect(3) = 9e-027
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 226 Q*NC*QHGHRQCSFVAHR 173
Score = 26.3 bits (51), Expect(3) = 9e-027
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 276 LCSWGLDSHWFTSKGLS 226
>gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_F03_A029 5', mRNA sequence
Length = 777
Score = 192 bits (414), Expect(3) = 4e-064
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 191 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 370
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 371 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 496
Score = 131 bits (281), Expect(2) = 3e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 426 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 247
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 246 FSPSISLIRPSTMSET*QK 190
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 74 NTYGPRMNIDDGRVVSNFI 130
Score = 43.7 bits (89), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 131 AQALRGEELTVQAPGTQTRSF 193
Score = 37.3 bits (75), Expect(2) = 3e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 129 MKLLTTRPSSMFMRGP*VL 73
>gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_F07_A029 5', mRNA sequence
Length = 734
Score = 192 bits (414), Expect(3) = 4e-064
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 343 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 522
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 523 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 648
Score = 131 bits (281), Expect(2) = 3e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 578 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 399
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 398 FSPSISLIRPSTMSET*QK 342
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 226 NTYGPRMNIDDGRVVSNFI 282
Score = 43.7 bits (89), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 283 AQALRGEELTVQAPGTQTRSF 345
Score = 37.3 bits (75), Expect(2) = 3e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 281 MKLLTTRPSSMFMRGP*VL 225
>gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092D07 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 691
Score = 192 bits (414), Expect(3) = 4e-064
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 337 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTENTPDDP 516
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 517 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 642
Score = 130 bits (279), Expect(2) = 5e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 572 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFN*AEGSMSSFTASASSNIVNSPGFPRLIGPV 393
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 392 FSPSISLIRPSTMSET*QK 336
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 220 NTYGPRMNIDDGRVVSNFI 276
Score = 43.7 bits (89), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 277 AQALRGEELTVQAPGTQTRSF 339
Score = 37.3 bits (75), Expect(2) = 5e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 275 MKLLTTRPSSMFMRGP*VL 219
>gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP077G04 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 620
Score = 192 bits (414), Expect(3) = 4e-064
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 137 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTENTPDDP 316
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 317 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 442
Score = 130 bits (279), Expect(2) = 5e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 372 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFN*AEGSMSSFTASASSNIVNSPGFPRLIGPV 193
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 192 FSPSISLIRPSTMSET*QK 136
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 20 NTYGPRMNIDDGRVVSNFI 76
Score = 43.7 bits (89), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 77 AQALRGEELTVQAPGTQTRSF 139
Score = 37.3 bits (75), Expect(2) = 5e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 75 MKLLTTRPSSMFMRGP*VL 19
>gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC049 3' end, mRNA sequence
Length = 544
Score = 192 bits (414), Expect(3) = 4e-064
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 152 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 331
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 332 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 457
Score = 131 bits (281), Expect(2) = 3e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 387 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 208
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 207 FSPSISLIRPSTMSET*QK 151
Score = 47.8 bits (98), Expect(3) = 4e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 35 NTYGPRMNIDDGRVVSNFI 91
Score = 43.7 bits (89), Expect(3) = 4e-064
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 92 AQALRGEELTVQAPGTQTRSF 154
Score = 37.3 bits (75), Expect(2) = 3e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 90 MKLLTTRPSSMFMRGP*VL 34
>gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_G02_A029 3', mRNA sequence
Length = 870
Score = 191 bits (412), Expect(3) = 8e-064
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE VKELI TV M ENTPDDP
Sbjct: 372 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDP 551
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R+RKPDITKA +LGWEPK+ LR+GL LM +DFRERL V KK
Sbjct: 552 RKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERLGVSKK 677
Score = 128 bits (274), Expect(3) = 5e-040
Identities = 59/79 (74%), Positives = 64/79 (81%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR+ AFVMSGFL RGSSGVFS I TV I+SFT SASSS+VNSPGFP+ IGPV
Sbjct: 607 LGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASASSSIVNSPGFPRFIGPV 428
Query: 176 LFPFISLIRPSTISAT*QK 120
L P IS I+PSTIS T*QK
Sbjct: 427 LSPSISRIKPSTISET*QK 371
Score = 97.3 bits (206), Expect(3) = 9e-027
Identities = 45/99 (45%), Positives = 60/99 (60%)
Frame = -3 / -2
Query: 411 QALPEIILHEHQAVPQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGHRHCHIWVDQLLHIL 232
Q L E+ H+ PQ +L LPS+ LCDV PLA +I SV H + ++LLH
Sbjct: 662 QPLTEVFCHKW*PFPQSNLRLPSKKCCCLCDVWFPLAWIIWSVFNHLYSC*CFNKLLHSF 483
Query: 231 SKFQHGEFTWVPQVNRSSLVSIHQLNKTINHIGNIAENS 115
SKFQH + +W+ ++ R S++S H N TINHI NIAE S
Sbjct: 482 SKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEAS 366
Score = 47.8 bits (98), Expect(3) = 8e-064
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 255 NTYGPRMNIDDGRVVSNFI 311
Score = 43.7 bits (89), Expect(3) = 8e-064
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQ RSF
Sbjct: 312 AQALRGEPMTVQAPGTQIRSF 374
Score = 37.7 bits (76), Expect(3) = 5e-040
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL +CVPG WTV GSP A*A
Sbjct: 376 QKLRICVPGAWTVIGSPLRA*A 311
Score = 36.8 bits (74), Expect(3) = 5e-040
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 310 IKLLTTRPSSMFIRGP*VL 254
Score = 34.5 bits (69), Expect(3) = 9e-027
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 312 Q*NC*QHGHRQCSFVAHR 259
Score = 26.3 bits (51), Expect(3) = 9e-027
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -2
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 362 LCSWGLDSHWFTSKGLS 312
>gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_65_A12_A029 5', mRNA sequence
Length = 794
Score = 181 bits (390), Expect(3) = 1e-061
Identities = 72/95 (75%), Positives = 81/95 (85%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE V ELI TV M ENTPDDP
Sbjct: 510 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVNELIETSTTVQMVENTPDDP 689
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRE 405
R+RKPDITKA +LGWEPK++LR+GL LM +DFRE
Sbjct: 690 RKRKPDITKATTLLGWEPKVILREGLPLMAEDFRE 794
Score = 128 bits (275), Expect(3) = 3e-040
Identities = 59/79 (74%), Positives = 64/79 (81%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR+ AFVMSGFL RGSSGVFS I TV I+SFT SASSS+VNSPGFP+ IGPV
Sbjct: 745 LGSHPRSVVAFVMSGFLLRGSSGVFSTICTVVDVSISSFTASASSSIVNSPGFPRFIGPV 566
Query: 176 LFPFISLIRPSTISAT*QK 120
L P IS I+PSTIS T*QK
Sbjct: 565 LSPSISRIKPSTISET*QK 509
Score = 92.3 bits (195), Expect(3) = 3e-025
Identities = 43/97 (44%), Positives = 59/97 (60%)
Frame = -3 / -1
Query: 405 LPEIILHEHQAVPQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGHRHCHIWVDQLLHILSK 226
L E+ H+ PQ++L LPS LCDV PLA +I SV H + ++L+H SK
Sbjct: 794 LTEVFCHKW*PFPQNNLRLPS*KCCCLCDVWFPLAWIIWSVFNHLYSC*CFNKLVHSFSK 615
Query: 225 FQHGEFTWVPQVNRSSLVSIHQLNKTINHIGNIAENS 115
FQH + +W+ ++ R S++S H N TINHI NIAE S
Sbjct: 614 FQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEAS 504
Score = 47.8 bits (98), Expect(3) = 1e-061
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 393 NTYGPRMNIDDGRVVSNFI 449
Score = 46.4 bits (95), Expect(3) = 1e-061
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQTRSF
Sbjct: 450 AQALRGEPMTVQAPGTQTRSF 512
Score = 38.2 bits (77), Expect(3) = 3e-040
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL VCVPG WTV GSP A*A
Sbjct: 514 QKLRVCVPGAWTVIGSPLRA*A 449
Score = 36.8 bits (74), Expect(3) = 3e-040
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 448 IKLLTTRPSSMFIRGP*VL 392
Score = 34.5 bits (69), Expect(3) = 3e-025
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 450 Q*NC*QHGHRQCSFVAHR 397
Score = 26.3 bits (51), Expect(3) = 3e-025
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 500 LCSWGLDSHWFTSKGLS 450
>gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_19_H03_A029 5', mRNA sequence
Length = 789
Score = 98.7 bits (209), Expect(4) = 1e-059
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = +1 / +3
Query: 274 MTENTPDDPRQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
MTENTPDDPR RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 372 MTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 524
Score = 97.3 bits (206), Expect(4) = 1e-059
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINP 258
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P
Sbjct: 220 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEP 357
Score = 78.5 bits (165), Expect(3) = 2e-031
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = -1 / -2
Query: 266 VTSGLINSFTFSASSSMVNSPGFPKLIGPVLFPFISLIRPSTISAT*QK 120
++ G ++SFT SASS++VNSPGFP+LIGPV P ISLIRPST+S T*QK
Sbjct: 365 LSRGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QK 219
Score = 58.3 bits (121), Expect(3) = 2e-031
Identities = 26/35 (74%), Positives = 26/35 (74%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGL 252
LGSHPR FAFVMSGFL RGSSGVFSVI L
Sbjct: 454 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEAL 350
Score = 47.8 bits (98), Expect(4) = 1e-059
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 103 NTYGPRMNIDDGRVVSNFI 159
Score = 43.7 bits (89), Expect(4) = 1e-059
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 160 AQALRGEELTVQAPGTQTRSF 222
Score = 37.3 bits (75), Expect(3) = 2e-031
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 158 MKLLTTRPSSMFMRGP*VL 102
>gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 3', mRNA sequence
Length = 822
Score = 192 bits (414), Expect(3) = 4e-059
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 101 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 280
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 281 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 406
Score = 131 bits (281), Expect(2) = 4e-033
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 336 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 157
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 156 FSPSISLIRPSTMSET*QK 100
Score = 43.7 bits (89), Expect(3) = 4e-059
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 41 AQALRGEELTVQAPGTQTRSF 103
Score = 31.3 bits (62), Expect(3) = 4e-059
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 20 MNIDDGRVASNFI 58
MNIDDGRV SNFI
Sbjct: 2 MNIDDGRVVSNFI 40
Score = 29.9 bits (59), Expect(2) = 4e-033
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 65 LSR*SC*QHGHHQCS 21
L +*+C*QH HHQCS
Sbjct: 47 LVQ*NC*QHVHHQCS 3
>gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C12_A029 3', mRNA sequence
Length = 809
Score = 192 bits (414), Expect(3) = 4e-059
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 102 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 281
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 282 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 407
Score = 131 bits (281), Expect(2) = 4e-033
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 337 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 158
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 157 FSPSISLIRPSTMSET*QK 101
Score = 43.7 bits (89), Expect(3) = 4e-059
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 42 AQALRGEELTVQAPGTQTRSF 104
Score = 31.3 bits (62), Expect(3) = 4e-059
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / +3
Query: 20 MNIDDGRVASNFI 58
MNIDDGRV SNFI
Sbjct: 3 MNIDDGRVVSNFI 41
Score = 29.9 bits (59), Expect(2) = 4e-033
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 65 LSR*SC*QHGHHQCS 21
L +*+C*QH HHQCS
Sbjct: 48 LVQ*NC*QHVHHQCS 4
>gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 5', mRNA sequence
Length = 683
Score = 173 bits (373), Expect(3) = 2e-058
Identities = 70/93 (75%), Positives = 77/93 (82%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 385 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 564
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDF 399
R RKPDITKAK +LGWEP + LR+GL M +DF
Sbjct: 565 RMRKPDITKAKTLLGWEP*VSLREGLPRMAEDF 663
Score = 129 bits (277), Expect(2) = 1e-034
Identities = 58/78 (74%), Positives = 64/78 (82%)
Frame = -1 / -1
Query: 353 GSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVL 174
GSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 617 GSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVF 438
Query: 173 FPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 437 SPSISLIRPSTMSET*QK 384
Score = 47.8 bits (98), Expect(3) = 2e-058
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 268 NTYGPRMNIDDGRVVSNFI 324
Score = 43.7 bits (89), Expect(3) = 2e-058
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 325 AQALRGEELTVQAPGTQTRSF 387
Score = 37.3 bits (75), Expect(2) = 1e-034
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 323 MKLLTTRPSSMFMRGP*VL 267
>gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B11_A029 3', mRNA sequence
Length = 729
Score = 96.8 bits (205), Expect(4) = 4e-058
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +1 / +3
Query: 274 MTENTPDDPRQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
M ENTPDDPR+RKPDITKA +LGWEPK+ LR+GL LM +DFRERL V KK
Sbjct: 378 MVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERLGVSKK 530
Score = 90.9 bits (192), Expect(4) = 4e-058
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKE 246
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE VKE
Sbjct: 250 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKE 375
Score = 73.9 bits (155), Expect(4) = 7e-035
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1 / -2
Query: 245 SFTFSASSSMVNSPGFPKLIGPVLFPFISLIRPSTISAT*QK 120
SFT SASSS+VNSPGFP+ IGPVL P IS I+PSTIS T*QK
Sbjct: 374 SFTASASSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QK 249
Score = 60.6 bits (126), Expect(4) = 2e-024
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = -3 / -1
Query: 270 HCHIWVDQLLHILSKFQHGEFTWVPQVNRSSLVSIHQLNKTINHIGNIAENS 115
H + LLH SKFQH + +W+ ++ R S++S H N TINHI NIAE S
Sbjct: 399 HLECFQPSLLHSFSKFQHCKLSWISKIYRPSIISFH*PN*TINHIRNIAEAS 244
Score = 54.2 bits (112), Expect(4) = 7e-035
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVI 273
LGSHPR+ AFVMSGFL RGSSGVFS I
Sbjct: 460 LGSHPRSVVAFVMSGFLLRGSSGVFSTI 377
Score = 47.8 bits (98), Expect(4) = 4e-058
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 133 NTYGPRMNIDDGRVVSNFI 189
Score = 46.4 bits (95), Expect(4) = 4e-058
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQTRSF
Sbjct: 190 AQALRGEPMTVQAPGTQTRSF 252
Score = 45.5 bits (93), Expect(4) = 2e-024
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -3 / -2
Query: 411 QALPEIILHEHQAVPQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGH 274
Q L E+ H+ PQ +L LPS+ LCDV PLA +I SV H
Sbjct: 515 QPLTEVFCHKW*PFPQSNLRLPSKKCCCLCDVWFPLAWIIWSVFNH 378
Score = 38.2 bits (77), Expect(4) = 7e-035
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL VCVPG WTV GSP A*A
Sbjct: 254 QKLRVCVPGAWTVIGSPLRA*A 189
Score = 36.8 bits (74), Expect(4) = 7e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 188 IKLLTTRPSSMFIRGP*VL 132
Score = 34.5 bits (69), Expect(4) = 2e-024
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 190 Q*NC*QHGHRQCSFVAHR 137
Score = 26.3 bits (51), Expect(4) = 2e-024
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 240 LCSWGLDSHWFTSKGLS 190
>gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_D11_A021 5', mRNA
sequence
Length = 679
Score = 171 bits (369), Expect(3) = 6e-058
Identities = 69/89 (77%), Positives = 75/89 (84%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 409 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 588
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLM 387
R RKPDITKAK +LGWEPK+ LR+GL M
Sbjct: 589 RMRKPDITKAKTLLGWEPKVSLREGLPRM 675
Score = 131 bits (281), Expect(2) = 3e-035
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 644 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 465
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 464 FSPSISLIRPSTMSET*QK 408
Score = 47.8 bits (98), Expect(3) = 6e-058
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 292 NTYGPRMNIDDGRVVSNFI 348
Score = 43.7 bits (89), Expect(3) = 6e-058
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 349 AQALRGEELTVQAPGTQTRSF 411
Score = 37.3 bits (75), Expect(2) = 3e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 347 MKLLTTRPSSMFMRGP*VL 291
>gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_053_G03 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 460
Score = 164 bits (352), Expect(3) = 2e-056
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE VKELI TV M ENTPDDP
Sbjct: 174 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDP 353
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRE 405
R+ KPDITKA +LGWEP LR L LM + RE
Sbjct: 354 RKXKPDITKATTLLGWEPXXTLRXXLPLMAEXXRE 458
Score = 121 bits (258), Expect(3) = 6e-038
Identities = 56/78 (71%), Positives = 61/78 (78%)
Frame = -1 / -1
Query: 353 GSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVL 174
GSHPR+ AFVMSG RGSSGVFS I TV I+SFT SASSS+VNSPGFP+ IGPVL
Sbjct: 406 GSHPRSVVAFVMSGXXLRGSSGVFSTISTVVDVSISSFTASASSSIVNSPGFPRFIGPVL 227
Query: 173 FPFISLIRPSTISAT*QK 120
P IS I+PSTIS T*QK
Sbjct: 226 SPSISRIKPSTISET*QK 173
Score = 83.1 bits (175), Expect(3) = 1e-022
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = -3 / -3
Query: 369 PQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGHRHCHIWVDQLLHILSKFQHGEFTWVPQV 190
PQ LPS+ LCDV LA +I SV H + ++LLH SKFQH + +W+ ++
Sbjct: 422 PQSXXRLPSKKCCCLCDVWFXLAWIIWSVFNHLYSC*CFNKLLHSFSKFQHCKLSWISKI 243
Query: 189 NRSSLVSIHQLNKTINHIGNIAENS 115
R S++S H N TINHI NIAE S
Sbjct: 242 YRPSIISFH*PN*TINHIRNIAEAS 168
Score = 47.8 bits (98), Expect(3) = 2e-056
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 57 NTYGPRMNIDDGRVVSNFI 113
Score = 46.4 bits (95), Expect(3) = 2e-056
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQTRSF
Sbjct: 114 AQALRGEPMTVQAPGTQTRSF 176
Score = 38.2 bits (77), Expect(3) = 6e-038
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL VCVPG WTV GSP A*A
Sbjct: 178 QKLRVCVPGAWTVIGSPLRA*A 113
Score = 36.8 bits (74), Expect(3) = 6e-038
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 112 IKLLTTRPSSMFIRGP*VL 56
Score = 34.5 bits (69), Expect(3) = 1e-022
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 114 Q*NC*QHGHRQCSFVAHR 61
Score = 26.3 bits (51), Expect(3) = 1e-022
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 164 LCSWGLDSHWFTSKGLS 114
>gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_G01_A029 5', mRNA sequence
Length = 786
Score = 192 bits (414), Expect(2) = 2e-055
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 71 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 250
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 251 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 376
Score = 131 bits (281), Expect = 5e-030
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 306 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 127
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 126 FSPSISLIRPSTMSET*QK 70
Score = 43.7 bits (89), Expect(2) = 2e-055
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 11 AQALRGEELTVQAPGTQTRSF 73
>gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_A08_A029 3', mRNA sequence
Length = 781
Score = 192 bits (414), Expect(2) = 2e-055
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 73 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 252
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 253 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 378
Score = 131 bits (281), Expect = 5e-030
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 308 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 129
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 128 FSPSISLIRPSTMSET*QK 72
Score = 43.7 bits (89), Expect(2) = 2e-055
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 13 AQALRGEELTVQAPGTQTRSF 75
>gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 3', mRNA sequence
Length = 771
Score = 192 bits (414), Expect(2) = 2e-055
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 61 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 240
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 241 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 366
Score = 131 bits (281), Expect = 5e-030
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 296 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 117
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 116 FSPSISLIRPSTMSET*QK 60
Score = 43.7 bits (89), Expect(2) = 2e-055
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 1 AQALRGEELTVQAPGTQTRSF 63
>gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G05_A029 5', mRNA sequence
Length = 686
Score = 188 bits (406), Expect(2) = 3e-054
Identities = 77/102 (75%), Positives = 84/102 (82%)
Frame = +1 / -1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 626 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 447
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RK DITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 446 RMRKADITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 321
Score = 128 bits (275), Expect = 3e-029
Identities = 58/79 (73%), Positives = 64/79 (81%)
Frame = -1 / +1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMS FL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 391 LGSHPRRVFAFVMSAFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 570
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 571 FSPSISLIRPSTMSET*QK 627
Score = 43.7 bits (89), Expect(2) = 3e-054
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / -1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 686 AQALRGEELTVQAPGTQTRSF 624
>gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG636 3' end, mRNA sequence
Length = 624
Score = 155 bits (334), Expect(3) = 3e-053
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 392 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 571
Query: 301 RQRKPDITKAKEVLGWE 351
R RKPDITKAK +LGWE
Sbjct: 572 RMRKPDITKAKTLLGWE 622
Score = 129 bits (277), Expect(2) = 1e-034
Identities = 58/78 (74%), Positives = 64/78 (82%)
Frame = -1 / -1
Query: 353 GSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVL 174
GSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 624 GSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVF 445
Query: 173 FPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 444 SPSISLIRPSTMSET*QK 391
Score = 47.8 bits (98), Expect(3) = 3e-053
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 275 NTYGPRMNIDDGRVVSNFI 331
Score = 43.7 bits (89), Expect(3) = 3e-053
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 332 AQALRGEELTVQAPGTQTRSF 394
Score = 37.3 bits (75), Expect(2) = 1e-034
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 330 MKLLTTRPSSMFMRGP*VL 274
>gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G05_A029 3', mRNA sequence
Length = 705
Score = 188 bits (406), Expect(2) = 5e-053
Identities = 77/102 (75%), Positives = 84/102 (82%)
Frame = +1 / -1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 651 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 472
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RK DITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 471 RMRKADITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 346
Score = 128 bits (275), Expect = 3e-029
Identities = 58/79 (73%), Positives = 64/79 (81%)
Frame = -1 / +2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMS FL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 416 LGSHPRRVFAFVMSAFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 595
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 596 FSPSISLIRPSTMSET*QK 652
Score = 39.6 bits (80), Expect(2) = 5e-053
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / -1
Query: 66 AVRGEPLTVQRPGTQTRSF 122
A+RGE LTVQ PGTQTRSF
Sbjct: 705 ALRGEELTVQAPGTQTRSF 649
>gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_133_G06 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 423
Score = 144 bits (308), Expect(3) = 2e-050
Identities = 59/83 (71%), Positives = 64/83 (77%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G+ TGPINLGNPGEFTMLELAE VKELI TV M ENTPD
Sbjct: 174 FCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDXX 353
Query: 301 RQRKPDITKAKEVLGWEPKIVLR 369
R+ KPDIT +LGWEP LR
Sbjct: 354 RKXKPDITXXTTLLGWEPXXTLR 422
Score = 112 bits (240), Expect(3) = 2e-035
Identities = 53/78 (67%), Positives = 58/78 (74%)
Frame = -1 / -3
Query: 353 GSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVL 174
GSHPR+ VMSG R SSGVFS I TV I+SFT SASSS+VNSPGFP+ IGPVL
Sbjct: 406 GSHPRSVVXXVMSGXXLRXSSGVFSTISTVVDVSISSFTASASSSIVNSPGFPRFIGPVL 227
Query: 173 FPFISLIRPSTISAT*QK 120
P IS I+PSTIS T*QK
Sbjct: 226 SPSISRIKPSTISET*QK 173
Score = 80.3 bits (169), Expect(3) = 8e-022
Identities = 38/85 (44%), Positives = 49/85 (57%)
Frame = -3 / -2
Query: 369 PQDDLGLPSQNFLRLCDVRLPLAGVIRSVLGHRHCHIWVDQLLHILSKFQHGEFTWVPQV 190
PQ LPS+ CDV LA I SV H + ++LLH SKFQH + +W+ ++
Sbjct: 422 PQSXXRLPSKKCCXXCDVWFXLAXXIWSVFNHLYSC*CFNKLLHSFSKFQHCKLSWISKI 243
Query: 189 NRSSLVSIHQLNKTINHIGNIAENS 115
R S++S H N TINHI NIAE S
Sbjct: 242 YRPSIISFH*PN*TINHIRNIAEAS 168
Score = 47.8 bits (98), Expect(3) = 2e-050
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 57 NTYGPRMNIDDGRVVSNFI 113
Score = 46.4 bits (95), Expect(3) = 2e-050
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGEP+TVQ PGTQTRSF
Sbjct: 114 AQALRGEPMTVQAPGTQTRSF 176
Score = 38.2 bits (77), Expect(3) = 2e-035
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 124 RKLLVCVPGLWTVRGSPRTA*A 59
+KL VCVPG WTV GSP A*A
Sbjct: 178 QKLRVCVPGAWTVIGSPLRA*A 113
Score = 36.8 bits (74), Expect(3) = 2e-035
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 57 MKLLATRPSSMFILGP*VL 1
+KLL TRPSSMFI GP*VL
Sbjct: 112 IKLLTTRPSSMFIRGP*VL 56
Score = 34.5 bits (69), Expect(3) = 8e-022
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 59 R*SC*QHGHHQCSS*AHR 6
+*+C*QHGH QCS AHR
Sbjct: 114 Q*NC*QHGHRQCSFVAHR 61
Score = 26.3 bits (51), Expect(3) = 8e-022
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -2
Query: 110 LCSWPLDSQGLTAHSLS 60
LCSW LDS T+ LS
Sbjct: 164 LCSWGLDSHWFTSKGLS 114
>gb|CV036174.1|CV036174 RTNACL1_57_F03.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_F03_A029 3', mRNA sequence
Length = 698
Score = 189 bits (407), Expect(2) = 2e-050
Identities = 77/102 (75%), Positives = 84/102 (82%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 42 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 221
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DF RL VPKK
Sbjct: 222 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFPLRLNVPKK 347
Score = 131 bits (281), Expect = 5e-030
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 277 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 98
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 97 FSPSISLIRPSTMSET*QK 41
Score = 30.4 bits (60), Expect(2) = 2e-050
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 84 LTVQRPGTQTRSF 122
LTVQ PGTQTRSF
Sbjct: 6 LTVQAPGTQTRSF 44
>gb|BF777810.1|BF777810 NXSI_075_H12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_075_H12 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 466
Score = 192 bits (414), Expect(2) = 1e-049
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 28 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 207
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 208 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 333
Score = 131 bits (281), Expect = 5e-030
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 263 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 84
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 83 FSPSISLIRPSTMSET*QK 27
Score = 24.4 bits (47), Expect(2) = 1e-049
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 93 QRPGTQTRSF 122
Q PGTQTRSF
Sbjct: 1 QAPGTQTRSF 30
>gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_C12_A029 5', mRNA sequence
Length = 792
Score = 154 bits (330), Expect(3) = 2e-048
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F YV+D+VDGLI+LM N GP NLGNPGEFTMLELA+ VKE I+ + ENT DDP
Sbjct: 338 FQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDP 517
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++L WEP+I LR+GL LM +DFR+R+
Sbjct: 518 HKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRV 628
Score = 85.4 bits (180), Expect(3) = 6e-024
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = -1 / -1
Query: 359 ILGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGP 180
ILGSH R SFAFV+SGFL GSS VFS+ + I SFT ASS++VNSPG P+L GP
Sbjct: 576 ILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT*ASSNIVNSPGLPRLKGP 397
Query: 179 VLFPFISLIRPSTISAT 129
IS I PST S T
Sbjct: 396 TWLFSISRISPSTKSET 346
Score = 43.2 bits (88), Expect(3) = 2e-048
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM IDDGRV SNF+
Sbjct: 221 NTYGPRMCIDDGRVVSNFV 277
Score = 35.0 bits (70), Expect(3) = 6e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / -2
Query: 53 SC*QHGHHQCSS*AHRC 3
SC*QHGHH+C+ H C
Sbjct: 272 SC*QHGHHRCTFWVHMC 222
Score = 34.1 bits (68), Expect(3) = 2e-048
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 278 AQALRKEPLTVYGDGKQTRSF 340
Score = 28.1 bits (55), Expect(3) = 6e-024
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC+P TV+GS R+A*A ++
Sbjct: 339 KLRVCLPSP*TVKGSLRSA*ATKL 268
>gb|CX652950.1|CX652950 COLD1_62_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_B04_A029 5', mRNA sequence
Length = 733
Score = 192 bits (414), Expect = 2e-048
Identities = 78/102 (76%), Positives = 85/102 (83%)
Frame = +1 / -2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 723 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 544
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R RKPDITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 543 RMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 418
Score = 131 bits (281), Expect = 5e-030
Identities = 59/79 (74%), Positives = 65/79 (82%)
Frame = -1 / +2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 488 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 667
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 668 FSPSISLIRPSTMSET*QK 724
>gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G11_A029 5', mRNA sequence
Length = 667
Score = 154 bits (330), Expect(3) = 1e-047
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F YV+D+VDGLI+LM N GP NLGNPGEFTMLELA+ VKE I+ + ENT DDP
Sbjct: 116 FQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDP 295
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++L WEP+I LR+GL LM +DFR+R+
Sbjct: 296 HKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRV 406
Score = 85.4 bits (180), Expect(3) = 5e-023
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = -1 / -2
Query: 359 ILGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGP 180
ILGSH R SFAFV+SGFL GSS VFS+ + I SFT ASS++VNSPG P+L GP
Sbjct: 354 ILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT*ASSNIVNSPGLPRLKGP 175
Query: 179 VLFPFISLIRPSTISAT 129
IS I PST S T
Sbjct: 174 TWLFSISRISPSTKSET 124
Score = 40.5 bits (82), Expect(3) = 1e-047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2 / +2
Query: 5 TYGPRMNIDDGRVASNFI 58
TYGPRM IDDGRV SNF+
Sbjct: 2 TYGPRMCIDDGRVVSNFV 55
Score = 34.1 bits (68), Expect(3) = 1e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 56 AQALRKEPLTVYGDGKQTRSF 118
Score = 31.8 bits (63), Expect(3) = 5e-023
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 54 KLLATRPSSMFILGP 10
KLL TRPSSM ILGP
Sbjct: 51 KLLTTRPSSMHILGP 7
Score = 28.1 bits (55), Expect(3) = 5e-023
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC+P TV+GS R+A*A ++
Sbjct: 117 KLRVCLPSP*TVKGSLRSA*ATKL 46
>gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP61 3' end, mRNA sequence
Length = 736
Score = 154 bits (330), Expect(3) = 2e-047
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F YV+D+VDGLI+LM N GP NLGNPGEFTMLELA+ VKE I+ + ENT DDP
Sbjct: 419 FQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDP 598
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++L WEP+I LR+GL LM +DFR+R+
Sbjct: 599 HKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRV 709
Score = 85.4 bits (180), Expect(3) = 6e-024
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = -1 / -2
Query: 359 ILGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGP 180
ILGSH R SFAFV+SGFL GSS VFS+ + I SFT ASS++VNSPG P+L GP
Sbjct: 657 ILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT*ASSNIVNSPGLPRLKGP 478
Query: 179 VLFPFISLIRPSTISAT 129
IS I PST S T
Sbjct: 477 TWLFSISRISPSTKSET 427
Score = 40.0 bits (81), Expect(3) = 2e-047
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM IDD RV SNF+
Sbjct: 302 NTYGPRMCIDDDRVVSNFV 358
Score = 35.0 bits (70), Expect(3) = 6e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 53 SC*QHGHHQCSS*AHRC 3
SC*QHGHH+C+ H C
Sbjct: 353 SC*QHGHHRCTFWVHMC 303
Score = 34.1 bits (68), Expect(3) = 2e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 359 AQALRKEPLTVYGDGKQTRSF 421
Score = 28.1 bits (55), Expect(3) = 6e-024
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC+P TV+GS R+A*A ++
Sbjct: 420 KLRVCLPSP*TVKGSLRSA*ATKL 349
>gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_H09_A029 5', mRNA sequence
Length = 812
Score = 135 bits (289), Expect(3) = 4e-047
Identities = 54/67 (80%), Positives = 57/67 (85%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 610 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 789
Query: 301 RQRKPDI 321
R RKPDI
Sbjct: 790 RMRKPDI 810
Score = 110 bits (234), Expect(2) = 7e-029
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = -1 / -1
Query: 323 VMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVLFPFISLIRPS 144
VMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV P ISLIRPS
Sbjct: 812 VMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPS 633
Query: 143 TISAT*QK 120
T+S T*QK
Sbjct: 632 TMSET*QK 609
Score = 47.8 bits (98), Expect(3) = 4e-047
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 493 NTYGPRMNIDDGRVVSNFI 549
Score = 43.7 bits (89), Expect(3) = 4e-047
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 550 AQALRGEELTVQAPGTQTRSF 612
Score = 37.3 bits (75), Expect(2) = 7e-029
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 548 MKLLTTRPSSMFMRGP*VL 492
>gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP066H03 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 701
Score = 134 bits (288), Expect(3) = 6e-047
Identities = 54/68 (79%), Positives = 57/68 (83%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MT NTPDDP
Sbjct: 498 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTXNTPDDP 677
Query: 301 RQRKPDIT 324
R RKPDIT
Sbjct: 678 RMRKPDIT 701
Score = 105 bits (225), Expect(2) = 1e-027
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = -1 / -2
Query: 323 VMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVLFPFISLIRPS 144
VMSGFL RGSSGV SVI G ++SFT SASS++VNSPGFP+LIGPV P ISLIRPS
Sbjct: 700 VMSGFLIRGSSGVXSVIFN*AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPS 521
Query: 143 TISAT*QK 120
T+S T*QK
Sbjct: 520 TMSET*QK 497
Score = 47.8 bits (98), Expect(3) = 6e-047
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 381 NTYGPRMNIDDGRVVSNFI 437
Score = 43.7 bits (89), Expect(3) = 6e-047
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 438 AQALRGEELTVQAPGTQTRSF 500
Score = 37.3 bits (75), Expect(2) = 1e-027
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 436 MKLLTTRPSSMFMRGP*VL 380
>gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_017_A02 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 567
Score = 149 bits (319), Expect(3) = 6e-047
Identities = 60/97 (61%), Positives = 74/97 (76%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F YV+D+VDGLI+LM N GP NLGNPGEFTMLELA+ VKE I+ + ENT DDP
Sbjct: 194 FQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDP 373
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++L WEP+I LR+ LM +DFR+R+
Sbjct: 374 HKRKPDITKAKDLLKWEPRISLREXXXLMVEDFRKRV 484
Score = 85.4 bits (180), Expect(3) = 6e-024
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = -1 / -1
Query: 359 ILGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGP 180
ILGSH R SFAFV+SGFL GSS VFS+ + I SFT ASS++VNSPG P+L GP
Sbjct: 432 ILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT*ASSNIVNSPGLPRLKGP 253
Query: 179 VLFPFISLIRPSTISAT 129
IS I PST S T
Sbjct: 252 TWLFSISRISPSTKSET 202
Score = 43.2 bits (88), Expect(3) = 6e-047
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM IDDGRV SNF+
Sbjct: 77 NTYGPRMCIDDGRVVSNFV 133
Score = 35.0 bits (70), Expect(3) = 6e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / -2
Query: 53 SC*QHGHHQCSS*AHRC 3
SC*QHGHH+C+ H C
Sbjct: 128 SC*QHGHHRCTFWVHMC 78
Score = 34.1 bits (68), Expect(3) = 6e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 134 AQALRKEPLTVYGDGKQTRSF 196
Score = 28.1 bits (55), Expect(3) = 6e-024
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC+P TV+GS R+A*A ++
Sbjct: 195 KLRVCLPSP*TVKGSLRSA*ATKL 124
>gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 3', mRNA sequence
Length = 898
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / -3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 590 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 411
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 410 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 300
Score = 87.7 bits (185), Expect(3) = 4e-022
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / +1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 355 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLNGPT 534
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 535 CSPSISRIRPSTRSET 582
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / -3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 707 NTYGPRMCLDDGRVVSNFV 651
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 650 AQALRKEPLTVYGDGKQTRSF 588
Score = 28.1 bits (55), Expect(3) = 4e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 655 KLLTTRPSSRHIRGPYVL 708
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 589 KLRVCFPSP*TVKGSLRKA*ATKL 660
>gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 5', mRNA sequence
Length = 885
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / -3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 673 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 494
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 493 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 383
Score = 87.7 bits (185), Expect(3) = 4e-022
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / +3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 438 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLNGPT 617
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 618 CSPSISRIRPSTRSET 665
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / -3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 790 NTYGPRMCLDDGRVVSNFV 734
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 733 AQALRKEPLTVYGDGKQTRSF 671
Score = 28.1 bits (55), Expect(3) = 4e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 738 KLLTTRPSSRHIRGPYVL 791
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 672 KLRVCFPSP*TVKGSLRKA*ATKL 743
>gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_63_E02_A033 3', mRNA sequence
Length = 830
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 241 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 420
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 421 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 531
Score = 87.7 bits (185), Expect(3) = 4e-022
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 476 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLNGPT 297
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 296 CSPSISRIRPSTRSET 249
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 124 NTYGPRMCLDDGRVVSNFV 180
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 181 AQALRKEPLTVYGDGKQTRSF 243
Score = 28.1 bits (55), Expect(3) = 4e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 176 KLLTTRPSSRHIRGPYVL 123
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 242 KLRVCFPSP*TVKGSLRKA*ATKL 171
>gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA651 3' end, mRNA sequence
Length = 797
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / +1
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 304 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 483
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 484 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 594
Score = 87.7 bits (185), Expect(3) = 4e-022
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 539 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLNGPT 360
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 359 CSPSISRIRPSTRSET 312
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 187 NTYGPRMCLDDGRVVSNFV 243
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 244 AQALRKEPLTVYGDGKQTRSF 306
Score = 28.1 bits (55), Expect(3) = 4e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 239 KLLTTRPSSRHIRGPYVL 186
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 305 KLRVCFPSP*TVKGSLRKA*ATKL 234
>gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_H09_A029 5', mRNA sequence
Length = 786
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / -2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 614 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 435
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 434 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 324
Score = 87.7 bits (185), Expect(3) = 2e-021
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / +1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 379 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLNGPT 558
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 559 CSPSISRIRPSTRSET 606
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / -2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 731 NTYGPRMCLDDGRVVSNFV 675
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / -2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 674 AQALRKEPLTVYGDGKQTRSF 612
Score = 26.3 bits (51), Expect(3) = 2e-021
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 54 KLLATRPSSMFILGP 10
KLL TRPSS I GP
Sbjct: 679 KLLTTRPSSRHIRGP 723
Score = 26.3 bits (51), Expect(3) = 2e-021
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 613 KLRVCFPSP*TVKGSLRKA*ATKL 684
>gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_E12_A029 3', mRNA sequence
Length = 749
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / -3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 576 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 397
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 396 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 286
Score = 87.7 bits (185), Expect(3) = 4e-022
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / +2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 341 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLNGPT 520
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 521 CSPSISRIRPSTRSET 568
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / -3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 693 NTYGPRMCLDDGRVVSNFV 637
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 636 AQALRKEPLTVYGDGKQTRSF 574
Score = 28.1 bits (55), Expect(3) = 4e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / +2
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 641 KLLTTRPSSRHIRGPYVL 694
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 575 KLRVCFPSP*TVKGSLRKA*ATKL 646
>gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_22_G10_A022 5', mRNA sequence
Length = 716
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 347 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 526
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 527 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 637
Score = 87.7 bits (185), Expect(3) = 4e-022
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 582 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLNGPT 403
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 402 CSPSISRIRPSTRSET 355
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 230 NTYGPRMCLDDGRVVSNFV 286
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 287 AQALRKEPLTVYGDGKQTRSF 349
Score = 28.1 bits (55), Expect(3) = 4e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 282 KLLTTRPSSRHIRGPYVL 229
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 348 KLRVCFPSP*TVKGSLRKA*ATKL 277
>gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092F08 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 692
Score = 149 bits (320), Expect(3) = 8e-047
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 378 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDP 557
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKPDITKAK++LGWEPK+ LR GL LM +DFR R+
Sbjct: 558 HKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRV 668
Score = 87.7 bits (185), Expect(3) = 4e-022
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V+SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 613 LGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLKGPT 434
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 433 CSPSISRIRPSTRSET 386
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 261 NTYGPRMCLDDGRVVSNFV 317
Score = 34.1 bits (68), Expect(3) = 8e-047
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 318 AQALRKEPLTVYGDGKQTRSF 380
Score = 28.1 bits (55), Expect(3) = 4e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -2
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 313 KLLTTRPSSRHIRGPYVL 260
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / -2
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 379 KLRVCFPSP*TVKGSLRKA*ATKL 308
>gb|BE643911.1|BE643911 NXCI_048_H08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_048_H08 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 418
Score = 168 bits (361), Expect(2) = 3e-046
Identities = 70/102 (68%), Positives = 76/102 (74%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 68 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 247
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
R KPDIT K +LGWEPK+ LR L M +D R V KK
Sbjct: 248 RMXKPDITXXKTLLGWEPKVSLRXXLPRMAEDXRLXXNVXKK 373
Score = 121 bits (258), Expect = 7e-027
Identities = 55/79 (69%), Positives = 61/79 (77%)
Frame = -1 / -2
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR VMSGF RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 303 LGSHPRRVXXXVMSGFXIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 124
Query: 176 LFPFISLIRPSTISAT*QK 120
P ISLIRPST+S T*QK
Sbjct: 123 FSPSISLIRPSTMSET*QK 67
Score = 37.3 bits (75), Expect(2) = 3e-046
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 72 RGEPLTVQRPGTQTRSF 122
RGE LTVQ PGTQTRSF
Sbjct: 20 RGEELTVQAPGTQTRSF 70
>gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E05_A029 5', mRNA sequence
Length = 774
Score = 130 bits (279), Expect(3) = 1e-045
Identities = 52/65 (80%), Positives = 55/65 (84%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDP
Sbjct: 578 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDP 757
Query: 301 RQRKP 315
R RKP
Sbjct: 758 RMRKP 772
Score = 105 bits (225), Expect(2) = 1e-027
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = -1 / -1
Query: 317 SGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVLFPFISLIRPSTI 138
SGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV P ISLIRPST+
Sbjct: 774 SGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTM 595
Query: 137 SAT*QK 120
S T*QK
Sbjct: 594 SET*QK 577
Score = 47.8 bits (98), Expect(3) = 1e-045
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 461 NTYGPRMNIDDGRVVSNFI 517
Score = 43.7 bits (89), Expect(3) = 1e-045
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 518 AQALRGEELTVQAPGTQTRSF 580
Score = 37.3 bits (75), Expect(2) = 1e-027
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 516 MKLLTTRPSSMFMRGP*VL 460
>gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_029_B09 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 627
Score = 142 bits (305), Expect(3) = 9e-045
Identities = 56/97 (57%), Positives = 72/97 (74%)
Frame = +1 / +2
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
F +V+D+V+GL++LM G GP NLGNPGEFTMLELA+ VKE I+ + + NT DDP
Sbjct: 158 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQXVKETIDTNAKIEFRPNTEDDP 337
Query: 301 RQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERL 411
+RKP TKAK++LGWEPK+ R GL LM +DFR R+
Sbjct: 338 HKRKPXXTKAKDLLGWEPKVSXRKGLPLMVEDFRRRV 448
Score = 87.2 bits (184), Expect(3) = 6e-022
Identities = 44/76 (57%), Positives = 48/76 (63%)
Frame = -1 / -1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGS P SFA V SGFL GSS VF + I SFT ASS++VNSPGFP+L GP
Sbjct: 393 LGSQPSRSFALVXSGFLLCGSSSVFGLNSIFALVSIVSFTXCASSNIVNSPGFPRLNGPT 214
Query: 176 LFPFISLIRPSTISAT 129
P IS IRPST S T
Sbjct: 213 CSPSISRIRPSTRSET 166
Score = 42.3 bits (86), Expect(3) = 9e-045
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRM +DDGRV SNF+
Sbjct: 41 NTYGPRMCLDDGRVVSNFV 97
Score = 34.1 bits (68), Expect(3) = 9e-045
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+R EPLTV G QTRSF
Sbjct: 98 AQALRKEPLTVYGDGKQTRSF 160
Score = 28.1 bits (55), Expect(3) = 6e-022
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 54 KLLATRPSSMFILGP*VL 1
KLL TRPSS I GP VL
Sbjct: 93 KLLTTRPSSRHIRGPYVL 40
Score = 26.3 bits (51), Expect(3) = 6e-022
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 121 KLLVCVPGLWTVRGSPRTA*ADEV 50
KL VC P TV+GS R A*A ++
Sbjct: 159 KLRVCFPSP*TVKGSLRKA*ATKL 88
>gb|CV032286.1|CV032286 RTNACL1_7_D03.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_D03_A029 3', mRNA sequence
Length = 694
Score = 180 bits (387), Expect = 1e-044
Identities = 74/97 (76%), Positives = 80/97 (82%)
Frame = +1 / +1
Query: 136 DMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDPRQRKP 315
DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDPR RKP
Sbjct: 1 DMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKP 180
Query: 316 DITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
DITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 181 DITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 291
Score = 122 bits (262), Expect = 2e-027
Identities = 54/73 (73%), Positives = 60/73 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 221 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 42
Query: 176 LFPFISLIRPSTI 138
P ISLIRPST+
Sbjct: 41 FSPSISLIRPSTM 3
>gb|CX646066.1|CX646066 COLD1_7_C08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_7_C08_A029 3', mRNA sequence
Length = 751
Score = 180 bits (387), Expect = 1e-044
Identities = 74/97 (76%), Positives = 80/97 (82%)
Frame = +1 / +1
Query: 136 DMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDPRQRKP 315
DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDPR RKP
Sbjct: 1 DMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKP 180
Query: 316 DITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
DITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 181 DITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 291
Score = 122 bits (262), Expect = 2e-027
Identities = 54/73 (73%), Positives = 60/73 (82%)
Frame = -1 / -3
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 221 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 42
Query: 176 LFPFISLIRPSTI 138
P ISLIRPST+
Sbjct: 41 FSPSISLIRPSTM 3
>gb|DR069646.1|DR069646 RTDK1_8_C04.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_8_C04_A029 5', mRNA sequence
Length = 728
Score = 180 bits (387), Expect = 1e-044
Identities = 74/97 (76%), Positives = 80/97 (82%)
Frame = +1 / -1
Query: 136 DMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDPRQRKP 315
DMVDGLI+LM G TGPINLGNPGEFTMLELAE VKELI P + MTENTPDDPR RKP
Sbjct: 728 DMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKP 549
Query: 316 DITKAKEVLGWEPKIVLRDGLVLMEDDFRERLTVPKK 426
DITKAK +LGWEPK+ LR+GL M +DFR RL VPKK
Sbjct: 548 DITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK 438
Score = 122 bits (262), Expect = 2e-027
Identities = 54/73 (73%), Positives = 60/73 (82%)
Frame = -1 / +1
Query: 356 LGSHPRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPV 177
LGSHPR FAFVMSGFL RGSSGVFSVI G ++SFT SASS++VNSPGFP+LIGPV
Sbjct: 508 LGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNSPGFPRLIGPV 687
Query: 176 LFPFISLIRPSTI 138
P ISLIRPST+
Sbjct: 688 FSPSISLIRPSTM 726
>gb|BG275186.1|BG275186 NXSI_140_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_140_H02 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 428
Score = 117 bits (250), Expect(3) = 9e-042
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +1 / +3
Query: 121 FCYVADMVDGLIKLMNGNKTGPINLGNPGEFTMLELAENVKELINPDVTVTMTENTPDDP 300
FCYV+DMVDGLI+LM G TGPINLGNPGEFTM LAE V LI P + MTENTPDDP
Sbjct: 219 FCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMXXLAEAVXXLIEPSAELKMTENTPDDP 398
Query: 301 RQRKPDIT 324
R DIT
Sbjct: 399 RMXXXDIT 422
Score = 98.2 bits (208), Expect(2) = 3e-025
Identities = 45/69 (65%), Positives = 50/69 (72%)
Frame = -1 / -2
Query: 326 FVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSASSSMVNSPGFPKLIGPVLFPFISLIRP 147
FVMS RGSSGVFSVI G ++ FT SA +VNSPGFP+LIGPV P ISLIRP
Sbjct: 424 FVMSXXXIRGSSGVFSVIFNSAEGSMSXFTASAXXXIVNSPGFPRLIGPVFSPSISLIRP 245
Query: 146 STISAT*QK 120
ST+S T*QK
Sbjct: 244 STMSET*QK 218
Score = 47.8 bits (98), Expect(3) = 9e-042
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 2 NTYGPRMNIDDGRVASNFI 58
NTYGPRMNIDDGRV SNFI
Sbjct: 102 NTYGPRMNIDDGRVVSNFI 158
Score = 43.7 bits (89), Expect(3) = 9e-042
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 60 AQAVRGEPLTVQRPGTQTRSF 122
AQA+RGE LTVQ PGTQTRSF
Sbjct: 159 AQALRGEELTVQAPGTQTRSF 221
Score = 37.3 bits (75), Expect(2) = 3e-025
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 57 MKLLATRPSSMFILGP*VL 1
MKLL TRPSSMF+ GP*VL
Sbjct: 157 MKLLTTRPSSMFMRGP*VL 101
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 419,171,096
Number of Sequences: 355925
Number of extensions: 6477269
Number of successful extensions: 55076
Number of sequences better than 1.0e-020: 128
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 10190434905
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)