TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716365.2.1
(936 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR023271.1|DR023271 STRS1_56_B12.g1_A034 Shoot tip pitch... 341 e-104
gb|DR060851.1|DR060851 RTNIT1_30_A04.g1_A029 Roots minus ni... 329 2e-089
gb|DR088977.1|DR088977 RTAL1_5_G05.g1_A029 Roots plus added... 310 1e-088
gb|DR117407.1|DR117407 RTMG1_6_F10.g1_A029 Roots minus magn... 298 2e-086
gb|DR018738.1|DR018738 STRS1_25_H09.b1_A034 Shoot tip pitch... 319 2e-086
gb|DR163606.1|DR163606 RTFE1_43_H03.g1_A029 Roots minus iro... 296 4e-086
gb|CO166677.1|CO166677 FLD1_63_E10.g1_A029 Root flooded Pin... 296 6e-086
gb|DR095991.1|DR095991 STRR1_25_B08.b1_A033 Stem Response R... 293 2e-085
gb|DR047931.1|DR047931 RTBOR1_5_C10.g2_A029 Roots plus adde... 293 3e-085
gb|CX652350.1|CX652350 COLD1_58_B10.g1_A029 Root cold Pinus... 293 3e-085
gb|BX255099.1|BX255099 BX255099 Pinus pinaster differenciat... 283 1e-081
gb|DR163514.1|DR163514 RTFE1_43_H03.b1_A029 Roots minus iro... 296 2e-079
gb|DR060775.1|DR060775 RTNIT1_30_A04.b1_A029 Roots minus ni... 223 1e-066
gb|DR088892.1|DR088892 RTAL1_5_G05.b1_A029 Roots plus added... 240 1e-062
gb|DR058833.1|DR058833 RTNIT1_14_E01.b1_A029 Roots minus ni... 210 1e-054
gb|DR058919.1|DR058919 RTNIT1_14_E01.g1_A029 Roots minus ni... 177 5e-054
gb|CF401310.1|CF401310 RTWW1_11_E11.g1_A015 Well-watered lo... 152 1e-053
gb|CF398598.1|CF398598 RTDS3_13_D12.b1_A022 Drought-stresse... 165 5e-040
gb|DR049993.1|DR049993 RTBOR1_20_C02.g1_A029 Roots plus add... 102 1e-033
gb|CF395349.1|CF395349 RTDS2_11_A05.b1_A021 Drought-stresse... 98 5e-032
gb|BE496448.1|BE496448 NXCI_018_C03_F NXCI (Nsf Xylem Compr... 101 5e-031
gb|CO172421.1|CO172421 NDL1_29_D06.g1_A029 Needles control ... 89 1e-027
gb|CO172345.1|CO172345 NDL1_29_D06.b1_A029 Needles control ... 89 1e-027
gb|DR058015.1|DR058015 RTNIT1_9_D10.b1_A029 Roots minus nit... 84 2e-027
gb|DR049315.1|DR049315 RTBOR1_15_H05.b1_A029 Roots plus add... 94 8e-027
gb|AW011438.1|AW011438 ST20G06 Pine TriplEx shoot tip libra... 78 2e-024
gb|DR049307.1|DR049307 RTBOR1_15_G04.b1_A029 Roots plus add... 83 1e-023
gb|DR058708.1|DR058708 RTNIT1_13_A02.g1_A029 Roots minus ni... 81 5e-023
gb|CO196899.1|CO196899 GEO1_2_A08.g1_A029 Root gravitropism... 98 1e-022
gb|DR684550.1|DR684550 EST1074627 Normalized pine embryo li... 102 3e-021
>gb|DR023271.1|DR023271 STRS1_56_B12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_B12_A034 5', mRNA sequence
Length = 835
Score = 341 bits (739), Expect(4) = e-104
Identities = 135/145 (93%), Positives = 141/145 (97%)
Frame = -3 / +2
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV PLPEL+AEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 266 VGNQVTPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 445
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESP VSFAARDLIRGLL+KEPQHRLAYKRGATEIKQH
Sbjct: 446 TPFKGSGNRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQH 625
Query: 412 PFFEGVNWALIRCATPPDIPKPVEI 338
PFFEGVNWALIRCATPP+IPKP++I
Sbjct: 626 PFFEGVNWALIRCATPPEIPKPIDI 700
Score = 241 bits (520), Expect = 7e-063
Identities = 97/128 (75%), Positives = 107/128 (83%)
Frame = +3 / -2
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
+ +S G GISGGVAH I AQ TPSK GCC ISVAPRLYANRC GS S PLI+SLAAKLT
Sbjct: 705 KSMSIGFGISGGVAHRIRAQFTPSKKGCCLISVAPRLYANRCCGSFTSKPLIKSLAAKLT 526
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
GDSGNL+GCPTTLN+VA PEPL GV P RSSY+N+PNVHQSTALP PSP IISGA+YS
Sbjct: 525 VGDSGNLRGCPTTLNSVARLPEPLKGVFPNRSSYRNIPNVHQSTALP*PSPLIISGARYS 346
Query: 693 WVPTKDID 716
WVPT D++
Sbjct: 345 WVPTNDME 322
Score = 148 bits (318), Expect(2) = 6e-036
Identities = 68/143 (47%), Positives = 94/143 (65%)
Frame = +2 / -1
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
++N L + R S TP P++T K+RVLF F G+TL+ *SML + +PN+IPC KT+
Sbjct: 700 NVNRLWNFRGSSTPYKGPVHTLKKRVLFDFSGTTLVC*SMLWLFHK*TPNQIPCCKTYCG 521
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
*FW+ LS Y+EQC I T + CL+++K I +Y+KCPP++ TSM L+ N R +LMG
Sbjct: 520 *FWKSERLSYYIEQCSTIA*TLKGCLSKQKFI*KYSKCPPIHCTSMTLSFNNLRS*ILMG 341
Query: 698 ANKRHRPCICRLCNKLRKWSDLI 766
++K H RLCNKL K LI
Sbjct: 340 SHK*HGTGTSRLCNKLWKRGHLI 272
Score = 122 bits (261), Expect(2) = 2e-033
Identities = 63/139 (45%), Positives = 84/139 (60%)
Frame = -2 / +1
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S +S A CRA C +V C +P*V +*+Y RG+WKC LVDIW+I +* S+ +DT+
Sbjct: 274 SSDPSSRAYCRAY*CPFHVICGNP*VSSS*DY*RRGSWKCSGLVDIWNISI*TSVWKDTL 453
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL 405
F + VQ S TT ++ RIT S+FC KG *G + + SIS+ AW H N+T P
Sbjct: 454 *GFRQSCYTVQCSRTTSQISRITHSKFCSKGFD*GFTCERATTSISIQAWCH*NQTTPFF 633
Query: 404 *RC*LGINQVCHST*YPQA 348
* C LG VC+S * +A
Sbjct: 634 *GCELGPYTVCYSP*NSKA 690
Score = 51.5 bits (106), Expect(4) = e-104
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -3 / +2
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCV 851
D K PAYCVQP CIEP+C+QP CV
Sbjct: 104 DMSKKLPAYCVQPACIEPSCVQPVCV 181
Score = 40.9 bits (83), Expect(2) = 2e-033
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = -3 / +2
Query: 901 CVQPVCIEPACMQPSC 854
CVQPVC++P+C+QP+C
Sbjct: 161 CVQPVCVQPSCVQPTC 208
Score = 24.0 bits (46), Expect(4) = e-104
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3 / +2
Query: 340 IPRSVASSSQKATSAAEKGSDYLELEFF* 254
+P + +S + A ++ G +YL+ +FF*
Sbjct: 719 VPVASSSEKKIADVESKSGGNYLDFDFF* 805
Score = 23.1 bits (44), Expect(2) = 6e-036
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / -2
Query: 855 QEGCIQAGSMHTGCT 899
Q GC Q G HTG T
Sbjct: 207 QVGCTQEG*THTGWT 163
Score = 22.1 bits (42), Expect(4) = e-104
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3 / +2
Query: 841 TCFSPRFF 818
TCF PRFF
Sbjct: 203 TCFVPRFF 226
>gb|DR060851.1|DR060851 RTNIT1_30_A04.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_A04_A029 5', mRNA sequence
Length = 730
Score = 329 bits (713), Expect = 2e-089
Identities = 133/162 (82%), Positives = 142/162 (87%)
Frame = -3 / -1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV PL EL+AEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+EL+FGK
Sbjct: 655 VGNQVTPLLELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGK 476
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESP SFAARDLIRGLL+KEPQHRLA KRGATEIKQH
Sbjct: 475 TPFKGSGNRATLFNVVGQPLRFPESPTASFAARDLIRGLLVKEPQHRLAVKRGATEIKQH 296
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEK 287
PFFEGVNWALIRC TPPDIPKP EI + T++ +K
Sbjct: 295 PFFEGVNWALIRCTTPPDIPKPFEIELPAKKVATATTASEKK 170
Score = 225 bits (485), Expect = 5e-058
Identities = 92/126 (73%), Positives = 100/126 (79%)
Frame = +3 / +3
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
IS G G+SGGV I AQ TPSK GCC ISVAPRL A RC*GS S PLI+SLAAKL G
Sbjct: 222 ISKGFGMSGGVVQRIRAQFTPSKKGCCLISVAPRLTAKRC*GSFTSKPLIKSLAAKLAVG 401
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
DSGNL+GCPTTL VA P+PLNGV PK SS +N+P VHQSTALPCPSP IISGAKYSWV
Sbjct: 402 DSGNLRGCPTTLKRVARLPDPLNGVFPKISSCRNIPKVHQSTALPCPSPLIISGAKYSWV 581
Query: 699 PTKDID 716
PT D++
Sbjct: 582 PTNDME 599
Score = 139 bits (299), Expect = 2e-032
Identities = 67/146 (45%), Positives = 93/146 (63%)
Frame = +2 / +2
Query: 329 RTRDLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKT 508
R +L L ++R GT + PI T KERVLF F S+L +MLRF +Q+ +++P KT
Sbjct: 212 RQFNLKGLWNVRGRGTANKSPIYTLKERVLFDFSCSSLDCQAMLRFFYQQTSDQVPGCKT 391
Query: 509 HYR*FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQV 688
*F +P* L NY+++ I FEWCL+++K + +Y K PP+YST+MP + NFRCQ+
Sbjct: 392 CCG*FRKP*RLPNYIKKSSTIA*PFEWCLSKDKFM*KYPKGPPIYSTTMPFSFDNFRCQI 571
Query: 689 LMGANKRHRPCICRLCNKLRKWSDLI 766
LMG+ K H LCN+L K S LI
Sbjct: 572 LMGSYK*HGAGTSWLCNELEKRSHLI 649
Score = 79.0 bits (166), Expect(2) = 2e-024
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -2 / -3
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S ++S A CRA+ C ++V C +P*V GT NY+ R AW CCRLVD+W I * L +DTI
Sbjct: 647 SSDSSSRAHCRAN*CPLHVICRNP*VFGTGNYQRRRAW*CCRLVDLWDIST*TYLWKDTI 468
Query: 584 QR 579
QR
Sbjct: 467 QR 462
Score = 53.8 bits (111), Expect(2) = 2e-024
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = -2 / -3
Query: 548 SWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQVCH 369
SW T KV IT S+FC +G A + TS S+ A S+ N+TAP L* C LG + H
Sbjct: 431 SWATSKVS*ITHSKFCSQGLDQRFAGKRTSTSLGSQARSN*NQTAPFL*GCKLGSYSLYH 252
Query: 368 ST*YPQAS*DPSFC 327
+ *+ +A *D C
Sbjct: 251 AP*HSKAL*D*IAC 210
>gb|DR088977.1|DR088977 RTAL1_5_G05.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_5_G05_A029 5', mRNA sequence
Length = 853
Score = 310 bits (672), Expect(2) = 1e-088
Identities = 123/158 (77%), Positives = 141/158 (89%)
Frame = -3 / +2
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ +QV PL ELVAEPT ARS SFVGTHEYLAPEI+KGEGHGSAVDWWT+GIFLYELLFGK
Sbjct: 113 VCHQVTPLTELVAEPTSARSNSFVGTHEYLAPEIVKGEGHGSAVDWWTYGIFLYELLFGK 292
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKG+ N ATL NVVGQPL+FPE+PVVS+AA+DLIRGLL+KEPQHRLA+KRGATEIKQH
Sbjct: 293 TPFKGASNTATLNNVVGQPLKFPETPVVSYAAKDLIRGLLVKEPQHRLAFKRGATEIKQH 472
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATS 299
PFFEG+NWALIRC+TPP++PKP+E V + +TS
Sbjct: 473 PFFEGLNWALIRCSTPPEVPKPLETTFPVQTLPTGSTS 586
Score = 202 bits (435), Expect = 4e-051
Identities = 88/126 (69%), Positives = 95/126 (75%)
Frame = +3 / -2
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S G G SGGV I AQ PSK GCC ISVAPRL ANRC GS S PLI+SLAA LTTG
Sbjct: 546 VSKGFGTSGGVEQRIRAQFKPSKKGCCLISVAPRLNANRCCGSFTSKPLIKSLAA*LTTG 367
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
SGNL+GCPTTL +VA+ PLNGV P RSSYKN+P VHQSTALP PSP ISGAKYS V
Sbjct: 366 VSGNLRGCPTTLLSVAVLLAPLNGVFPNRSSYKNIP*VHQSTALP*PSPLTISGAKYSCV 187
Query: 699 PTKDID 716
PT + D
Sbjct: 186 PTNEFD 169
Score = 112 bits (239), Expect = 4e-024
Identities = 60/144 (41%), Positives = 82/144 (56%)
Frame = +2 / -1
Query: 335 RDLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHY 514
R L L + RWSGT + P+ T KERVLF F TL S+L +Q+P+++ +
Sbjct: 550 RGLQRLWNFRWSGTANKSPVQTLKERVLFDFRCPTLECQSVLWLFYKQTPDQVLGRIAYN 371
Query: 515 R*FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLM 694
R FWE LS ++ + I EW L+++KLI +Y+ PP+ ST M A NF Q+ M
Sbjct: 370 RCFWELERLSYHIVKRGSITCPLEWRLSKQKLI*KYSVGPPINSTPMTFAFNNFGSQIFM 191
Query: 695 GANKRHRPCICRLCNKLRKWSDLI 766
+NK PC RLCNKL K S L+
Sbjct: 190 CSNK*I*PCTRRLCNKLSKRSHLM 119
Score = 70.3 bits (147), Expect(3) = 2e-023
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = -2 / +1
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S ++ *ACCRA CKV CW+ *+ G+ N R +W+CC LVD+ +I +*AS+ +D I
Sbjct: 121 SSDSSY*ACCRAYECKVKFICWNT*IFGSRNC*RRRSWECC*LVDLRNIFI*ASVWKDAI 300
Query: 584 Q 582
Q
Sbjct: 301 Q 303
Score = 47.8 bits (98), Expect(3) = 2e-023
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = -2 / +1
Query: 542 TTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST 363
T +VPR TC + C +G G A + + I + AW + N+T P L* LG + HST
Sbjct: 343 TASQVPRNTCCKLCGQGLDQGFACKRATTPIGIQAWGNGNQTTPFL*GFELGSYSLFHST 522
Query: 362 *YPQA 348
* +A
Sbjct: 523 *SSKA 537
Score = 36.8 bits (74), Expect(2) = 1e-088
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -3 / +2
Query: 901 CVQPVCIEPACMQPSCV 851
CV PVC++ +C+QPSC+
Sbjct: 8 CVDPVCVQQSCVQPSCL 58
Score = 29.0 bits (57), Expect(3) = 2e-023
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3 / +2
Query: 892 PVCIEPACMQPSCV 851
P C++P C+Q SCV
Sbjct: 2 PPCVDPVCVQQSCV 43
>gb|DR117407.1|DR117407 RTMG1_6_F10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_F10_A029 5', mRNA sequence
Length = 831
Score = 298 bits (646), Expect(2) = 2e-086
Identities = 117/137 (85%), Positives = 130/137 (94%)
Frame = -3 / +3
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ +QV PL ELVAEPT ARS SFVGTHEYLAPEI+KGEGHGSAVDWWT+GIFLYELLFGK
Sbjct: 420 VCHQVTPLTELVAEPTSARSNSFVGTHEYLAPEIVKGEGHGSAVDWWTYGIFLYELLFGK 599
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKG+GN ATL NVVGQPL+FPE+PVVS+AA+DLIRGLL+KEPQHRLA+KRGATEIKQH
Sbjct: 600 TPFKGAGNTATLNNVVGQPLKFPETPVVSYAAKDLIRGLLVKEPQHRLAFKRGATEIKQH 779
Query: 412 PFFEGVNWALIRCATPP 362
PFFEG+NWALIRC+TPP
Sbjct: 780 PFFEGLNWALIRCSTPP 830
Score = 197 bits (424), Expect = 1e-049
Identities = 85/118 (72%), Positives = 91/118 (77%)
Frame = +3 / -3
Query: 363 GGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLKGC 542
GGV I AQ PSK GCC ISVAPRL ANRC GS S PLI+SLAA LTTG SGNL+GC
Sbjct: 829 GGVEQRIRAQFKPSKKGCCLISVAPRLNANRCCGSFTSKPLIKSLAA*LTTGVSGNLRGC 650
Query: 543 PTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
PTTL +VA+ P PLNGV P RSSYKN+P VHQSTALP PSP ISGAKYS VPT + D
Sbjct: 649 PTTLLSVAVLPAPLNGVFPNRSSYKNIP*VHQSTALP*PSPLTISGAKYSCVPTNEFD 476
Score = 108 bits (231), Expect(2) = 6e-024
Identities = 57/135 (42%), Positives = 78/135 (57%)
Frame = +2 / -2
Query: 362 RWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GL 541
RWSGT + P+ T KERVLF F TL S+L +Q+P+++ + R FWE L
Sbjct: 830 RWSGTANKSPVQTLKERVLFDFRCPTLECQSVLWLFYKQTPDQVLGRIAYNRCFWELERL 651
Query: 542 SNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPC 721
S ++ + I EW L+++KLI +Y+ PP+ ST M A NF Q+ M +NK PC
Sbjct: 650 SYHIVKRGSITCPLEWRLSKQKLI*KYSVGPPINSTPMTFAFNNFGSQIFMCSNK*I*PC 471
Query: 722 ICRLCNKLRKWSDLI 766
RLCNKL K S L+
Sbjct: 470 TRRLCNKLSKRSHLM 426
Score = 70.3 bits (147), Expect(3) = 1e-025
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = -2 / +2
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S ++ *ACCRA CKV CW+ *+ G+ N R +W+CC LVD+ +I +*AS+ +D I
Sbjct: 428 SSDSSY*ACCRAYECKVKFICWNT*IFGSRNC*RRRSWECC*LVDLRNIFI*ASVWKDAI 607
Query: 584 Q 582
Q
Sbjct: 608 Q 610
Score = 46.4 bits (95), Expect(3) = 1e-025
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = -2 / +2
Query: 542 TTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST 363
T +VPR TC + C +G G A + + I + AW + N+T P L* LG + HST
Sbjct: 650 TASQVPRNTCCKLCGQGLDQGFACKRATTPIGIQAWGNGNQTTPFL*GFELGSYSLFHST 829
Score = 41.4 bits (84), Expect(2) = 2e-086
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3 / +3
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCV 851
D K PA+C+QP CI P C+ P CV
Sbjct: 258 DPLKRIPAFCIQPPCIPPPCVDPVCV 335
Score = 38.2 bits (77), Expect(3) = 1e-025
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -3 / +3
Query: 910 PAYCVQPVCIEPACMQPSCV 851
P CV PVC++ +C+QPSC+
Sbjct: 306 PPPCVDPVCVQQSCVQPSCL 365
Score = 22.6 bits (43), Expect(2) = 6e-024
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -3
Query: 855 QEGCIQAGSMHTGCTQ*AGL 914
QEGC Q TG TQ G+
Sbjct: 361 QEGCTQDC*TQTGSTQGGGI 302
>gb|DR018738.1|DR018738 STRS1_25_H09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_25_H09_A034 3', mRNA sequence
Length = 838
Score = 319 bits (690), Expect = 2e-086
Identities = 128/153 (83%), Positives = 136/153 (88%)
Frame = -3 / +2
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
EL+AEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+EL+FGKTPFKGSGNR
Sbjct: 2 ELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGKTPFKGSGNR 181
Query: 565 ATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWA 386
ATLFNVVGQPLRFPESP SFAARDLIRGLL+KEPQHRLA KRGATEIKQHPFFEGVNWA
Sbjct: 182 ATLFNVVGQPLRFPESPTASFAARDLIRGLLVKEPQHRLAVKRGATEIKQHPFFEGVNWA 361
Query: 385 LIRCATPPDIPKPVEIPRSVASSSQKATSAAEK 287
LIRC TPPDIPKP EI + T++ +K
Sbjct: 362 LIRCTTPPDIPKPFEIELPAKKVATATTASEKK 460
Score = 225 bits (485), Expect = 5e-058
Identities = 92/126 (73%), Positives = 100/126 (79%)
Frame = +3 / -2
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
IS G G+SGGV I AQ TPSK GCC ISVAPRL A RC*GS S PLI+SLAAKL G
Sbjct: 408 ISKGFGMSGGVVQRIRAQFTPSKKGCCLISVAPRLTAKRC*GSFTSKPLIKSLAAKLAVG 229
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
DSGNL+GCPTTL VA P+PLNGV PK SS +N+P VHQSTALPCPSP IISGAKYSWV
Sbjct: 228 DSGNLRGCPTTLKRVARLPDPLNGVFPKISSCRNIPKVHQSTALPCPSPLIISGAKYSWV 49
Query: 699 PTKDID 716
PT D++
Sbjct: 48 PTNDME 31
Score = 133 bits (286), Expect = 1e-030
Identities = 63/139 (45%), Positives = 89/139 (64%)
Frame = +2 / -1
Query: 329 RTRDLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKT 508
R +L L ++R GT + PI T KERVLF F S+L +MLRF +Q+ +++P KT
Sbjct: 418 RQFNLKGLWNVRGRGTANKSPIYTLKERVLFDFSCSSLDCQAMLRFFYQQTSDQVPGCKT 239
Query: 509 HYR*FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQV 688
*F +P* L NY+++ I FEWCL+++K + +Y K PP+YST+MP + NFRCQ+
Sbjct: 238 CCG*FRKP*RLPNYIKKSSTIA*PFEWCLSKDKFM*KYPKGPPIYSTTMPFSFDNFRCQI 59
Query: 689 LMGANKRHRPCICRLCNKL 745
LMG+ K H LCN+L
Sbjct: 58 LMGSYK*HGAGTSWLCNEL 2
Score = 76.2 bits (160), Expect(3) = 7e-025
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = -2 / +1
Query: 743 ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQR 579
A CRA+ C ++V C +P*V GT NY+ R AW CCRLVD+W I * L +DTIQR
Sbjct: 4 AHCRAN*CPLHVICRNP*VFGTGNYQRRRAW*CCRLVDLWDIST*TYLWKDTIQR 168
Score = 53.8 bits (111), Expect(3) = 7e-025
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = -2 / +1
Query: 548 SWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQVCH 369
SW T KV IT S+FC +G A + TS S+ A S+ N+TAP L* C LG + H
Sbjct: 199 SWATSKVS*ITHSKFCSQGLDQRFAGKRTSTSLGSQARSN*NQTAPFL*GCKLGSYSLYH 378
Query: 368 ST*YPQAS*DPSFC 327
+ *+ +A *D C
Sbjct: 379 AP*HSKAL*D*IAC 420
Score = 22.1 bits (42), Expect(3) = 7e-025
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = -3 / +2
Query: 343 EIPRSVASSSQKATSAAEKGSDYLELEFF* 254
++ + +S +K + + +YL+ +FF*
Sbjct: 425 KVATATTASEKKIAADSNSSGNYLDFDFF* 514
>gb|DR163606.1|DR163606 RTFE1_43_H03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_H03_A029 5', mRNA sequence
Length = 871
Score = 296 bits (640), Expect(2) = 4e-086
Identities = 115/143 (80%), Positives = 128/143 (89%)
Frame = -3 / +2
Query: 766 NQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 587
NQ LPEL+AEPT ARSMSFVGTHEYLAPEIIKG+GHGSAVDWWTFGIFLYELL+G TP
Sbjct: 176 NQATLLPELIAEPTSARSMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTP 355
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKG+ NR TL NVVGQPL+FP+SP VSFAARDLIRGLL+K+PQHR+ +KRGATEIKQHPF
Sbjct: 356 FKGASNRETLENVVGQPLKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPF 535
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
F+ NWALIR TPP IPKPV++
Sbjct: 536 FDSANWALIRSTTPPQIPKPVDL 604
Score = 185 bits (398), Expect = 5e-046
Identities = 82/125 (65%), Positives = 89/125 (71%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG GI GGV I AQ SKNGCC ISVAP L C GS S PLI+S AAKLT G+
Sbjct: 600 STGFGI*GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGE 421
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
SGN GCPTT +NV+ PLNGV+P SSYK +PNVHQSTALP P P IISGAKYS VP
Sbjct: 420 SGNFNGCPTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VP 241
Query: 702 TKDID 716
T D+D
Sbjct: 240 TNDMD 226
Score = 95.5 bits (202), Expect(2) = 4e-024
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = -2 / +1
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
SG +S C AD+C ++V C H VLG+*N + G W+CC LVDIW + + A+LR DT+
Sbjct: 178 SGNPSSRTNCGADQCSIHVVCGHSRVLGS*NNQRAGPWECC*LVDIWDLFIRAALRDDTV 357
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCC 498
Q + ++ +R W ++V R + +FCC
Sbjct: 358 QGGKQSRNVRERCWAAIEVSRFSDCKFCC 444
Score = 43.2 bits (88), Expect(2) = 4e-086
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3 / +2
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCV 851
D + P YCVQP CIEP+C+ P C+
Sbjct: 23 DLSRRAPVYCVQPSCIEPSCVTPVCL 100
Score = 36.3 bits (73), Expect(2) = 4e-024
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 901 CVQPVCIEPACMQPSC 854
C++P C+ P C+QPSC
Sbjct: 65 CIEPSCVTPVCLQPSC 112
>gb|CO166677.1|CO166677 FLD1_63_E10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_63_E10_A029 5', mRNA sequence
Length = 882
Score = 296 bits (640), Expect(2) = 6e-086
Identities = 115/143 (80%), Positives = 128/143 (89%)
Frame = -3 / -2
Query: 766 NQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 587
NQ LPEL+AEPT ARSMSFVGTHEYLAPEIIKG+GHGSAVDWWTFGIFLYELL+G TP
Sbjct: 728 NQATLLPELIAEPTSARSMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTP 549
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKG+ NR TL NVVGQPL+FP+SP VSFAARDLIRGLL+K+PQHR+ +KRGATEIKQHPF
Sbjct: 548 FKGASNRETLENVVGQPLKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPF 369
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
F+ NWALIR TPP IPKPV++
Sbjct: 368 FDSANWALIRSTTPPQIPKPVDL 300
Score = 185 bits (398), Expect = 5e-046
Identities = 82/125 (65%), Positives = 89/125 (71%)
Frame = +3 / +1
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG GI GGV I AQ SKNGCC ISVAP L C GS S PLI+S AAKLT G+
Sbjct: 304 STGFGI*GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGE 483
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
SGN GCPTT +NV+ PLNGV+P SSYK +PNVHQSTALP P P IISGAKYS VP
Sbjct: 484 SGNFNGCPTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VP 663
Query: 702 TKDID 716
T D+D
Sbjct: 664 TNDMD 678
Score = 95.5 bits (202), Expect(2) = 4e-024
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = -2 / -1
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
SG +S C AD+C ++V C H VLG+*N + G W+CC LVDIW + + A+LR DT+
Sbjct: 726 SGNPSSRTNCGADQCSIHVVCGHSRVLGS*NNQRAGPWECC*LVDIWDLFIRAALRDDTV 547
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCC 498
Q + ++ +R W ++V R + +FCC
Sbjct: 546 QGGKQSRNVRERCWAAIEVSRFSDCKFCC 460
Score = 42.8 bits (87), Expect(2) = 6e-086
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3 / -2
Query: 910 PAYCVQPVCIEPACMQPSCV 851
P YCVQP CIEP+C+ P C+
Sbjct: 863 PVYCVQPSCIEPSCVTPVCL 804
Score = 36.3 bits (73), Expect(2) = 4e-024
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 901 CVQPVCIEPACMQPSC 854
C++P C+ P C+QPSC
Sbjct: 839 CIEPSCVTPVCLQPSC 792
>gb|DR095991.1|DR095991 STRR1_25_B08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_25_B08_A033 3', mRNA sequence
Length = 843
Score = 293 bits (635), Expect(2) = 2e-085
Identities = 114/143 (79%), Positives = 127/143 (88%)
Frame = -3 / +3
Query: 766 NQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 587
NQ LPEL+AEPT ARSMSFVGTHEYLAPEIIKG+GHGSAVDWWTFGIFLYELL+G TP
Sbjct: 219 NQATLLPELIAEPTSARSMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTP 398
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKG+ NR TL NVVGQPL+FP+ P VSFAARDLIRGLL+K+PQHR+ +KRGATEIKQHPF
Sbjct: 399 FKGASNRETLENVVGQPLKFPDCPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPF 578
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
F+ NWALIR TPP IPKPV++
Sbjct: 579 FDSANWALIRSTTPPQIPKPVDL 647
Score = 184 bits (396), Expect = 9e-046
Identities = 82/125 (65%), Positives = 88/125 (70%)
Frame = +3 / -3
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG GI GGV I AQ SKNGCC ISVAP L C GS S PLI+S AAKLT G
Sbjct: 643 STGFGI*GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGQ 464
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
SGN GCPTT +NV+ PLNGV+P SSYK +PNVHQSTALP P P IISGAKYS VP
Sbjct: 463 SGNFNGCPTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VP 284
Query: 702 TKDID 716
T D+D
Sbjct: 283 TNDMD 269
Score = 96.4 bits (204), Expect(2) = 2e-024
Identities = 37/89 (41%), Positives = 57/89 (64%)
Frame = -2 / +2
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
SG +S C AD+C ++V C H VLG+*N + G W+CC LVDIW + + A+LR DT+
Sbjct: 221 SGNPSSRTNCGADQCSIHVVCGHSRVLGS*NNQRAGPWECC*LVDIWDLFIRAALRDDTV 400
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCC 498
Q + ++ +R W ++V R++ +FCC
Sbjct: 401 QGGKQSRNVRERCWAAIEVSRLSDCKFCC 487
Score = 43.2 bits (88), Expect(2) = 2e-085
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3 / +3
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCV 851
D + P YCVQP CIEP+C+ P C+
Sbjct: 66 DLSRRAPVYCVQPSCIEPSCVTPVCL 143
Score = 36.3 bits (73), Expect(2) = 2e-024
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / +3
Query: 901 CVQPVCIEPACMQPSC 854
C++P C+ P C+QPSC
Sbjct: 108 CIEPSCVTPVCLQPSC 155
>gb|DR047931.1|DR047931 RTBOR1_5_C10.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_5_C10_A029 5', mRNA sequence
Length = 787
Score = 293 bits (634), Expect(2) = 3e-085
Identities = 114/143 (79%), Positives = 127/143 (88%)
Frame = -3 / -1
Query: 766 NQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 587
NQ LPEL+AEPT ARSMSFVGTHEYLAPEIIKG+GHGSAVDWWTFGIFLYELL+G P
Sbjct: 616 NQATLLPELIAEPTSARSMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTIP 437
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKG+ NR TL NVVGQPL+FP+SP VSFAARDLIRGLL+K+PQHR+ +KRGATEIKQHPF
Sbjct: 436 FKGASNRETLENVVGQPLKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPF 257
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
F+ NWALIR TPP IPKPV++
Sbjct: 256 FDSANWALIRSTTPPQIPKPVDL 188
Score = 184 bits (397), Expect = 6e-046
Identities = 81/125 (64%), Positives = 89/125 (71%)
Frame = +3 / +3
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG GI GGV I AQ SKNGCC ISVAP L C GS S PLI+S AAKLT G+
Sbjct: 192 STGFGI*GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGE 371
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
SGN GCPTT +NV+ PLNG++P SSYK +PNVHQSTALP P P IISGAKYS VP
Sbjct: 372 SGNFNGCPTTFSNVSRLLAPLNGIVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VP 551
Query: 702 TKDID 716
T D+D
Sbjct: 552 TNDMD 566
Score = 95.5 bits (202), Expect(2) = 4e-024
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = -2 / -3
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
SG +S C AD+C ++V C H VLG+*N + G W+CC LVDIW + + A+LR DT+
Sbjct: 614 SGNPSSRTNCGADQCSIHVVCGHSRVLGS*NNQRAGPWECC*LVDIWDLFIRAALRDDTV 435
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCC 498
Q + ++ +R W ++V R + +FCC
Sbjct: 434 QGGKQSRNVRERCWAAIEVSRFSDCKFCC 348
Score = 43.2 bits (88), Expect(2) = 3e-085
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3 / -1
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCV 851
D + P YCVQP CIEP+C+ P C+
Sbjct: 769 DLSRRAPVYCVQPSCIEPSCVTPVCL 692
Score = 36.3 bits (73), Expect(2) = 4e-024
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 901 CVQPVCIEPACMQPSC 854
C++P C+ P C+QPSC
Sbjct: 727 CIEPSCVTPVCLQPSC 680
>gb|CX652350.1|CX652350 COLD1_58_B10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_B10_A029 5', mRNA sequence
Length = 781
Score = 293 bits (635), Expect(2) = 3e-085
Identities = 114/143 (79%), Positives = 127/143 (88%)
Frame = -3 / -1
Query: 766 NQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 587
NQ LPEL+AEPT ARSMSFVGTHEYLAPEIIKG+GHGSAVDWWTFGIFLYELL+G TP
Sbjct: 640 NQATLLPELIAEPTSARSMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTP 461
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKG+ NR TL NVVGQPL+FP+SP VSFAARDLIRGLL+K+PQHR+ +KRGATE KQHPF
Sbjct: 460 FKGASNRETLENVVGQPLKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATETKQHPF 281
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
F+ NWALIR TPP IPKPV++
Sbjct: 280 FDSANWALIRSTTPPQIPKPVDL 212
Score = 184 bits (397), Expect = 6e-046
Identities = 81/125 (64%), Positives = 89/125 (71%)
Frame = +3 / +3
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG GI GGV I AQ SKNGCC +SVAP L C GS S PLI+S AAKLT G+
Sbjct: 216 STGFGI*GGVVLRIRAQFALSKNGCCLVSVAPLLKPILCCGSFTSKPLIKSRAAKLTVGE 395
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
SGN GCPTT +NV+ PLNGV+P SSYK +PNVHQSTALP P P IISGAKYS VP
Sbjct: 396 SGNFNGCPTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VP 575
Query: 702 TKDID 716
T D+D
Sbjct: 576 TNDMD 590
Score = 95.5 bits (202), Expect(2) = 4e-024
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = -2 / -3
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
SG +S C AD+C ++V C H VLG+*N + G W+CC LVDIW + + A+LR DT+
Sbjct: 638 SGNPSSRTNCGADQCSIHVVCGHSRVLGS*NNQRAGPWECC*LVDIWDLFIRAALRDDTV 459
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCC 498
Q + ++ +R W ++V R + +FCC
Sbjct: 458 QGGKQSRNVRERCWAAIEVSRFSDCKFCC 372
Score = 42.8 bits (87), Expect(2) = 3e-085
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3 / -1
Query: 910 PAYCVQPVCIEPACMQPSCV 851
P YCVQP CIEP+C+ P C+
Sbjct: 775 PVYCVQPSCIEPSCVTPVCL 716
Score = 36.3 bits (73), Expect(2) = 4e-024
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 901 CVQPVCIEPACMQPSC 854
C++P C+ P C+QPSC
Sbjct: 751 CIEPSCVTPVCLQPSC 704
>gb|BX255099.1|BX255099 BX255099 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP110G11, mRNA sequence
Length = 505
Score = 283 bits (613), Expect(2) = 1e-081
Identities = 114/128 (89%), Positives = 119/128 (92%)
Frame = -3 / +3
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV PL EL+AEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+EL+FGK
Sbjct: 120 VGNQVTPLLELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGK 299
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESP SFAARDLIRGLL+KEPQHRLA KRGA IKQH
Sbjct: 300 TPFKGSGNRATLFNVVGQPLRFPESPTASFAARDLIRGLLVKEPQHRLAVKRGAN*IKQH 479
Query: 412 PFFEGVNW 389
PFFEGVNW
Sbjct: 480 PFFEGVNW 503
Score = 201 bits (434), Expect(2) = 2e-051
Identities = 81/110 (73%), Positives = 88/110 (80%)
Frame = +3 / -1
Query: 387 AQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLKGCPTTLNNVA 566
AQ TPSK GCC I APRL A RC*GS S PLI+SLAAKL GDSGNL+GCPTTL VA
Sbjct: 505 AQFTPSKKGCCLIQFAPRLTAKRC*GSFTSKPLIKSLAAKLAVGDSGNLRGCPTTLKRVA 326
Query: 567 LFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
P+PLNGV PK SS +N+P VHQSTALPCPSP IISGAKYSWVPT D++
Sbjct: 325 RLPDPLNGVFPKISSCRNIPKVHQSTALPCPSPLIISGAKYSWVPTNDME 176
Score = 127 bits (273), Expect(2) = 8e-029
Identities = 60/126 (47%), Positives = 82/126 (65%)
Frame = +2 / -3
Query: 389 PINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCRP 568
PI T KERVLF S+L +MLRF +Q+ +++P KT *F +P* L NY+++
Sbjct: 503 PIYTLKERVLFDSVCSSLDCQAMLRFFYQQTSDQVPGCKTCCG*FRKP*RLPNYIKKSST 324
Query: 569 IPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKLR 748
I FEWCL+++K + +Y K PP+YST+MP + NFRCQ+LMG+ K H LCN+L
Sbjct: 323 IA*PFEWCLSKDKFM*KYPKGPPIYSTTMPFSFDNFRCQILMGSYK*HGAGTSWLCNELE 144
Query: 749 KWSDLI 766
K S LI
Sbjct: 143 KRSHLI 126
Score = 79.0 bits (166), Expect(3) = 3e-026
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -2 / +2
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S ++S A CRA+ C ++V C +P*V GT NY+ R AW CCRLVD+W I * L +DTI
Sbjct: 128 SSDSSSRAHCRAN*CPLHVICRNP*VFGTGNYQRRRAW*CCRLVDLWDIST*TYLWKDTI 307
Query: 584 QR 579
QR
Sbjct: 308 QR 313
Score = 44.6 bits (91), Expect(3) = 3e-026
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = -2 / +2
Query: 548 SWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LG 387
SW T KV IT S+FC +G A + TS S+ A S N+T P L* C LG
Sbjct: 344 SWATSKVS*ITHSKFCSQGLDQRFAGKRTSTSLGSQARSKLNQTTPFL*GCKLG 505
Score = 40.5 bits (82), Expect(2) = 1e-081
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 901 CVQPVCIEPACMQPSC 854
C QPVC++P+C+QPSC
Sbjct: 15 CAQPVCVQPSCVQPSC 62
Score = 33.1 bits (66), Expect(3) = 3e-026
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / +3
Query: 898 VQPVCIEPACMQPSCV 851
++P C +P C+QPSCV
Sbjct: 3 IEPSCAQPVCVQPSCV 50
Score = 24.0 bits (46), Expect(2) = 2e-051
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 854 TRRLHTGRLNAHRLHT 901
TRRL+T RLN + L T
Sbjct: 62 TRRLYTRRLNTYWLST 15
Score = 21.7 bits (41), Expect(2) = 8e-029
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3 / -1
Query: 858 EGCIQAGSMHTGCTQ 902
+GC Q G HTG Q
Sbjct: 58 DGCTQEG*THTG*AQ 14
>gb|DR163514.1|DR163514 RTFE1_43_H03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_H03_A029 3', mRNA sequence
Length = 774
Score = 296 bits (640), Expect = 2e-079
Identities = 115/143 (80%), Positives = 128/143 (89%)
Frame = -3 / +3
Query: 766 NQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 587
NQ LPEL+AEPT ARSMSFVGTHEYLAPEIIKG+GHGSAVDWWTFGIFLYELL+G TP
Sbjct: 39 NQATLLPELIAEPTSARSMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTP 218
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKG+ NR TL NVVGQPL+FP+SP VSFAARDLIRGLL+K+PQHR+ +KRGATEIKQHPF
Sbjct: 219 FKGASNRETLENVVGQPLKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPF 398
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
F+ NWALIR TPP IPKPV++
Sbjct: 399 FDSANWALIRSTTPPQIPKPVDL 467
Score = 185 bits (398), Expect = 5e-046
Identities = 82/125 (65%), Positives = 89/125 (71%)
Frame = +3 / -3
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG GI GGV I AQ SKNGCC ISVAP L C GS S PLI+S AAKLT G+
Sbjct: 463 STGFGI*GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGE 284
Query: 522 SGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVP 701
SGN GCPTT +NV+ PLNGV+P SSYK +PNVHQSTALP P P IISGAKYS VP
Sbjct: 283 SGNFNGCPTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VP 104
Query: 702 TKDID 716
T D+D
Sbjct: 103 TNDMD 89
>gb|DR060775.1|DR060775 RTNIT1_30_A04.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_A04_A029 3', mRNA sequence
Length = 785
Score = 223 bits (482), Expect(2) = 1e-066
Identities = 90/101 (89%), Positives = 95/101 (94%)
Frame = -3 / -1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV PL EL+AEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+EL+FGK
Sbjct: 305 VGNQVTPLLELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGK 126
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLI 470
TPFKGSGNRATLFNVVGQPLRFPESP SFAARDLIRGLL+
Sbjct: 125 TPFKGSGNRATLFNVVGQPLRFPESPTASFAARDLIRGLLV 3
Score = 154 bits (331), Expect(2) = 3e-037
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = +3 / +1
Query: 474 SNPLIRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALP 653
S PLI+SLAAKL GDSGNL+GCPTTL VA P+PLNGV PK SS +N+P VHQSTALP
Sbjct: 7 SKPLIKSLAAKLAVGDSGNLRGCPTTLKRVARLPDPLNGVFPKISSCRNIPKVHQSTALP 186
Query: 654 CPSPFIISGAKYSWVPTKDID 716
CPSP IISGAKYSWVPT D++
Sbjct: 187 CPSPLIISGAKYSWVPTNDME 249
Score = 104 bits (222), Expect = 9e-022
Identities = 45/98 (45%), Positives = 65/98 (66%)
Frame = +2 / +3
Query: 473 EQSPNKIPCSKTHYR*FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTS 652
+Q+ +++P KT *F +P* L NY+++ I FEWCL+++K + +Y K PP+YST+
Sbjct: 6 QQTSDQVPGCKTCCG*FRKP*RLPNYIKKSSTIA*PFEWCLSKDKFM*KYPKGPPIYSTT 185
Query: 653 MPLALYNFRCQVLMGANKRHRPCICRLCNKLRKWSDLI 766
MP + NFRCQ+LMG+ K H LCN+L K S LI
Sbjct: 186 MPFSFDNFRCQILMGSYK*HGAGTSWLCNELEKRSHLI 299
Score = 79.0 bits (166), Expect(3) = 2e-023
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -2 / -3
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S ++S A CRA+ C ++V C +P*V GT NY+ R AW CCRLVD+W I * L +DTI
Sbjct: 297 SSDSSSRAHCRAN*CPLHVICRNP*VFGTGNYQRRRAW*CCRLVDLWDIST*TYLWKDTI 118
Query: 584 QR 579
QR
Sbjct: 117 QR 112
Score = 50.6 bits (104), Expect(2) = 1e-066
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / -1
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCV 851
D K PAYCVQP CIEP+C QP CV
Sbjct: 467 DPSKRVPAYCVQPACIEPSCAQPVCV 390
Score = 40.5 bits (82), Expect(3) = 2e-023
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3 / -1
Query: 901 CVQPVCIEPACMQPSC 854
C QPVC++P+C+QPSC
Sbjct: 410 CAQPVCVQPSCVQPSC 363
Score = 27.6 bits (54), Expect(3) = 2e-023
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 548 SWTTLKVPRITCSEFCCKG 492
SW T KV IT S+FC +G
Sbjct: 81 SWATSKVS*ITHSKFCSQG 25
Score = 24.0 bits (46), Expect(2) = 3e-037
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 854 TRRLHTGRLNAHRLHT 901
TRRL+T RLN + L T
Sbjct: 363 TRRLYTRRLNTYWLST 410
>gb|DR088892.1|DR088892 RTAL1_5_G05.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_5_G05_A029 3', mRNA sequence
Length = 762
Score = 240 bits (519), Expect = 1e-062
Identities = 93/120 (77%), Positives = 108/120 (90%)
Frame = -3 / +3
Query: 658 GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRG 479
GHGSAVDWWT+GIFLYELLFGKTPFKG+ N ATL NVVGQPL+FPE+PVVS+AA+DLIRG
Sbjct: 3 GHGSAVDWWTYGIFLYELLFGKTPFKGASNTATLNNVVGQPLKFPETPVVSYAAKDLIRG 182
Query: 478 LLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATS 299
LL+KEPQHRLA+KRGATEIKQHPFFEG+NWALIRC+TPP++PKP+E V + +TS
Sbjct: 183 LLVKEPQHRLAFKRGATEIKQHPFFEGLNWALIRCSTPPEVPKPLETTFPVQTLPTGSTS 362
Score = 171 bits (369), Expect = 5e-042
Identities = 75/107 (70%), Positives = 81/107 (75%)
Frame = +3 / -3
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+S G G SGGV I AQ PSK GCC ISVAPRL ANRC GS S PLI+SLAA LTTG
Sbjct: 322 VSKGFGTSGGVEQRIRAQFKPSKKGCCLISVAPRLNANRCCGSFTSKPLIKSLAA*LTTG 143
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCP 659
SGNL+GCPTTL +VA+ PLNGV P RSSYKN+P VHQSTALP P
Sbjct: 142 VSGNLRGCPTTLLSVAVLLAPLNGVFPNRSSYKNIP*VHQSTALP*P 2
>gb|DR058833.1|DR058833 RTNIT1_14_E01.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_E01_A029 3', mRNA sequence
Length = 647
Score = 210 bits (453), Expect(2) = 1e-054
Identities = 83/94 (88%), Positives = 88/94 (93%)
Frame = -3 / +3
Query: 619 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYK 440
+ Y GKTPFKGSGNRATLFNVVGQPLRFPESP VSFAARDLIRGLL+KEPQHRLAYK
Sbjct: 12 YFYMTSVGKTPFKGSGNRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYK 191
Query: 439 RGATEIKQHPFFEGVNWALIRCATPPDIPKPVEI 338
RGATEIKQHPFFEGVNWALIRCATPP+IPKP++I
Sbjct: 192 RGATEIKQHPFFEGVNWALIRCATPPEIPKPIDI 293
Score = 164 bits (352), Expect = 1e-039
Identities = 67/89 (75%), Positives = 72/89 (80%)
Frame = +3 / -2
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
+ +S G GISGGVAH I AQ TPSK GCC ISVAPRLYANRC GS S PLI+SLAAKLT
Sbjct: 298 KSMSIGFGISGGVAHRIRAQFTPSKKGCCLISVAPRLYANRCCGSFTSKPLIKSLAAKLT 119
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLP 599
GDSGNL+GCPTTLN+VA PEPL GV P
Sbjct: 118 VGDSGNLRGCPTTLNSVARLPEPLKGVFP 32
Score = 24.0 bits (46), Expect(2) = 1e-054
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3 / +3
Query: 340 IPRSVASSSQKATSAAEKGSDYLELEFF* 254
+P + +S + A ++ G +YL+ +FF*
Sbjct: 312 VPVASSSEKKIADVESKSGGNYLDFDFF* 398
>gb|DR058919.1|DR058919 RTNIT1_14_E01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_E01_A029 5', mRNA sequence
Length = 587
Score = 177 bits (380), Expect(3) = 5e-054
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = -3 / +2
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+ NQV PLPEL+AEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 362 VGNQVTPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 541
Query: 592 TPFKGSGNRATLFNV 548
TPFKGSGNRATLFNV
Sbjct: 542 TPFKGSGNRATLFNV 586
Score = 108 bits (230), Expect(2) = 3e-023
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = +3 / -3
Query: 549 TLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
TLN+VA PEPL GV P RSSY+N+PNVHQSTALP PSP IISGA+YSWVPT D++
Sbjct: 585 TLNSVARLPEPLKGVFPNRSSYRNIPNVHQSTALP*PSPLIISGARYSWVPTNDME 418
Score = 51.5 bits (106), Expect(3) = 5e-054
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -3 / +2
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCV 851
D K PAYCVQP CIEP+C+QP CV
Sbjct: 200 DMSKKLPAYCVQPACIEPSCVQPVCV 277
Score = 23.1 bits (44), Expect(2) = 3e-023
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / -3
Query: 855 QEGCIQAGSMHTGCT 899
Q GC Q G HTG T
Sbjct: 303 QVGCTQEG*THTGWT 259
Score = 22.1 bits (42), Expect(3) = 5e-054
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3 / +2
Query: 841 TCFSPRFF 818
TCF PRFF
Sbjct: 299 TCFVPRFF 322
>gb|CF401310.1|CF401310 RTWW1_11_E11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_11_E11_A015 5', mRNA sequence
Length = 783
Score = 152 bits (327), Expect(2) = 1e-053
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -3 / +1
Query: 748 PELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGN 569
PEL+AEPT+ARS SFVGTHEYLAPE+I G+GHGSAVDWWT G+FLYE+LFG+TPFKG+G
Sbjct: 340 PELIAEPTEARSRSFVGTHEYLAPEVISGKGHGSAVDWWTLGVFLYEMLFGRTPFKGAGK 519
Query: 568 RATLFNVVGQPLRFP 524
+TL N++ PL+FP
Sbjct: 520 DSTLTNIITHPLKFP 564
Score = 78.5 bits (165), Expect(2) = 1e-053
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = -3 / +1
Query: 502 AARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
AARDLI+ LL+K+P+ RL RGA +IK+HPFF+ +NWALIR PP +
Sbjct: 625 AARDLIKRLLVKDPRRRLGSARGAADIKKHPFFKNINWALIRSVPPPGV 771
>gb|CF398598.1|CF398598 RTDS3_13_D12.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_13_D12_A022 3', mRNA sequence
Length = 722
Score = 165 bits (354), Expect = 5e-040
Identities = 63/83 (75%), Positives = 73/83 (87%)
Frame = -3 / +3
Query: 586 FKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPF 407
FKG+ NR TL NVVGQPL+FP+SP VSFAARDLIRGLL+K+PQHR+ +KRGATEIKQHPF
Sbjct: 3 FKGASNRETLENVVGQPLKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPF 182
Query: 406 FEGVNWALIRCATPPDIPKPVEI 338
F+ NWALIR TPP IPKPV++
Sbjct: 183 FDSANWALIRSTTPPQIPKPVDL 251
Score = 111 bits (236), Expect = 1e-023
Identities = 50/82 (60%), Positives = 54/82 (65%)
Frame = +3 / -2
Query: 342 STGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGD 521
STG GI GGV I AQ SKNGCC ISVAP L C GS S PLI+S AAKLT G+
Sbjct: 247 STGFGI*GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGE 68
Query: 522 SGNLKGCPTTLNNVALFPEPLN 587
SGN GCPTT +NV+ PLN
Sbjct: 67 SGNFNGCPTTFSNVSRLLAPLN 2
>gb|DR049993.1|DR049993 RTBOR1_20_C02.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_20_C02_A029 5', mRNA sequence
Length = 851
Score = 102 bits (217), Expect(2) = 1e-033
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = -3 / -3
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 539
+S SFVGT EY+APEI+ G+GHG AVDWW FGI LYE+++GKTPFKG + T +N++ Q
Sbjct: 585 QSHSFVGTEEYVAPEILWGKGHGVAVDWWAFGILLYEMVYGKTPFKGCTRKETFYNIMCQ 406
Score = 61.6 bits (128), Expect(2) = 1e-033
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = -3 / -3
Query: 526 PESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKP 347
P+ S +DL+R LL+KEP RL + GA EIK H FFEGV W + + P P
Sbjct: 399 PQLSEPSSPLKDLLRALLVKEPTLRLGFNSGAQEIKNHKFFEGVRWDELEFVSRPPFVPP 220
>gb|CF395349.1|CF395349 RTDS2_11_A05.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_A05_A021 3', mRNA sequence
Length = 508
Score = 98.2 bits (208), Expect(2) = 5e-032
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = -3 / +1
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
+S SFVGT EY+APEI+ G+GHG AVDWW FGI LYE++ GKTPFKG + T +N++
Sbjct: 31 QSHSFVGTEEYVAPEILWGKGHGIAVDWWAFGILLYEMVNGKTPFKGLTRKETFYNIL 204
Score = 60.2 bits (125), Expect(2) = 5e-032
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = -3 / +1
Query: 526 PESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
P+ S +DL+R LL+KEP RL +K GA EIK H FFEGV W + + P
Sbjct: 217 PQLSQPSSPLQDLLRCLLVKEPSLRLGFKCGAQEIKNHEFFEGVRWDELEYVSRP 381
>gb|BE496448.1|BE496448 NXCI_018_C03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_018_C03 5' similar to Arabidopsis
thaliana sequence At5g03640 protein kinase -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 523
Score = 101 bits (216), Expect(2) = 5e-031
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = -3 / +2
Query: 523 ESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKP 347
+ P S AA+DLIRGLL+K+P R+A RGA EIKQHPFF G+NWALIRC+ PP IP P
Sbjct: 131 QGPGPSAAAKDLIRGLLVKDPAKRMASARGAAEIKQHPFFRGINWALIRCSIPPHIPSP 307
Score = 53.3 bits (110), Expect(2) = 5e-031
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -3 / +2
Query: 622 IFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 521
IF++ELL+G+TPF+G N TL NVV Q L FP+
Sbjct: 2 IFIFELLYGRTPFRGPDNDRTLANVVAQALHFPD 103
>gb|CO172421.1|CO172421 NDL1_29_D06.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_D06_A029 5', mRNA sequence
Length = 841
Score = 89.0 bits (188), Expect(2) = 1e-027
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = -3 / +3
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
+S SFVGT EY+APE++ GH VDWW+ GI +YE+ +GKTPF+GS + T FN++
Sbjct: 189 KSHSFVGTVEYIAPEVLWCTGHSFPVDWWSLGILMYEMKYGKTPFRGSSRKETFFNIM 362
Score = 54.7 bits (113), Expect(2) = 1e-027
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3 / +3
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNW 389
+DLI+ LL+K+P RL + GAT++K H FF G+ W
Sbjct: 402 KDLIKKLLVKDPSKRLGFSMGATDVKNHSFFHGLRW 509
>gb|CO172345.1|CO172345 NDL1_29_D06.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_D06_A029 3', mRNA sequence
Length = 759
Score = 89.0 bits (188), Expect(2) = 1e-027
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = -3 / +2
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
+S SFVGT EY+APE++ GH VDWW+ GI +YE+ +GKTPF+GS + T FN++
Sbjct: 35 KSHSFVGTVEYIAPEVLWCTGHSFPVDWWSLGILMYEMKYGKTPFRGSSRKETFFNIM 208
Score = 54.7 bits (113), Expect(2) = 1e-027
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3 / +2
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNW 389
+DLI+ LL+K+P RL + GAT++K H FF G+ W
Sbjct: 248 KDLIKKLLVKDPSKRLGFSMGATDVKNHSFFHGLRW 355
>gb|DR058015.1|DR058015 RTNIT1_9_D10.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_9_D10_A029 3', mRNA sequence
Length = 518
Score = 83.5 bits (176), Expect(2) = 2e-027
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = -3 / +3
Query: 700 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
GT EY+APEI+ G+GHG AVD W FGI LYE++ GKTPFKG + T +N++
Sbjct: 3 GTEEYVAPEILWGKGHGIAVD*WAFGILLYEMVDGKTPFKGLTRKETFYNIL 158
Score = 59.3 bits (123), Expect(2) = 2e-027
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = -3 / +2
Query: 526 PESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
P+ S +DL+R LL+KEP RL +K GA EIK H FFEGV W + + P
Sbjct: 242 PQLSQPSSPFQDLLRCLLVKEPTLRLGFKCGAQEIKNHEFFEGVRWDELEYVSRP 406
>gb|DR049315.1|DR049315 RTBOR1_15_H05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_15_H05_A029 3', mRNA sequence
Length = 675
Score = 94.1 bits (199), Expect(2) = 8e-027
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = -3 / +3
Query: 727 TDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT 560
+ RS SFVGT EY+APEI+ G GH + DWW+ GI LYE+L+GKTPF+GS R T
Sbjct: 81 SSGRSNSFVGTEEYVAPEIVSGSGHEFSADWWSLGILLYEMLYGKTPFRGSDKRET 248
Score = 46.9 bits (96), Expect(2) = 8e-027
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3 / +3
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
DLI LL K+P+ RL + G++++K H FF G+ W I P
Sbjct: 306 DLILRLLEKDPRRRLGSRNGSSDVKDHGFFAGLRWDFIETLCRP 437
>gb|AW011438.1|AW011438 ST20G06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST20G06, mRNA sequence
Length = 601
Score = 78.0 bits (164), Expect(2) = 2e-024
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -3 / +3
Query: 700 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
GT Y+APE++ GH VDWW+ GI +YE+ +GKTPF+GS + T FN++
Sbjct: 6 GTVXYIAPEVLWCTGHSFPVDWWSLGILMYEMKYGKTPFRGSSRKETFFNIM 161
Score = 54.7 bits (113), Expect(2) = 2e-024
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3 / +3
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNW 389
+DLI+ LL+K+P RL + GAT++K H FF G+ W
Sbjct: 201 KDLIKKLLVKDPSKRLGFSMGATDVKNHSFFHGLRW 308
>gb|DR049307.1|DR049307 RTBOR1_15_G04.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_15_G04_A029 3', mRNA sequence
Length = 611
Score = 83.1 bits (175), Expect(2) = 1e-023
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = -3 / +1
Query: 709 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT 560
S VGT EY+A EI+ G GH + DWW+ GI LYE+L+GKTPF+GS R T
Sbjct: 34 SLVGTEEYVALEIVSGSGHEFSADWWSLGILLYEMLYGKTPFRGSDKRET 183
Score = 46.9 bits (96), Expect(2) = 1e-023
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3 / +1
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
DLI LL K+P+ RL + G++++K H FF G+ W I P
Sbjct: 241 DLILRLLEKDPRRRLGSRNGSSDVKDHGFFAGLRWDFIETLCRP 372
>gb|DR058708.1|DR058708 RTNIT1_13_A02.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_A02_A029 5', mRNA sequence
Length = 596
Score = 81.3 bits (171), Expect(2) = 5e-023
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -3 / -1
Query: 697 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT 560
T EY+APEI+ G GH + DWW+ GI LYE+L+GKTPF+GS R T
Sbjct: 596 TEEYVAPEIVSGSGHEFSADWWSLGILLYEMLYGKTPFRGSDKRET 459
Score = 46.9 bits (96), Expect(2) = 5e-023
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3 / -1
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
DLI LL K+P+ RL + G++++K H FF G+ W I P
Sbjct: 401 DLILRLLEKDPRRRLGSRNGSSDVKDHGFFAGLRWDFIETLCRP 270
>gb|CO196899.1|CO196899 GEO1_2_A08.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_2_A08_A029 5', mRNA sequence
Length = 730
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 35/64 (54%), Positives = 48/64 (75%)
Frame = -3 / +3
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 539
RS S VGT EY+APE++KG GH AVDWW G+ LYE+L+GKTPFKG+ + T +N++ +
Sbjct: 372 RSYSLVGTEEYVAPEMLKGMGHDFAVDWWALGVLLYEMLYGKTPFKGATRKETFYNILMK 551
Query: 538 PLRF 527
+F
Sbjct: 552 QPQF 563
Score = 28.6 bits (56), Expect(2) = 1e-022
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3 / +3
Query: 487 IRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
+R L+I+ + + + IK H FF+ +NW I+ + P
Sbjct: 582 LRDLIIRLLEKEPSKRPSVDGIKNHSFFKELNWDTIQYISRP 707
>gb|DR684550.1|DR684550 EST1074627 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAU02 3' end, mRNA sequence
Length = 855
Score = 102 bits (217), Expect(2) = 3e-021
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = -3 / +3
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 539
+S SFVGT EY+APEI+ G+GHG AVDWW FGI LYE+++GKTPFKG + T +N++ Q
Sbjct: 516 QSHSFVGTEEYVAPEILWGKGHGVAVDWWAFGILLYEMVYGKTPFKGCTRKETFYNIMCQ 695
Score = 22.6 bits (43), Expect(2) = 3e-021
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1 / +1
Query: 762 RSDHFLSLLQSRQMQGLCL 706
R+ FLSLL Q LCL
Sbjct: 124 RTGGFLSLLPDSMQQKLCL 180
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 523,160,176
Number of Sequences: 355925
Number of extensions: 7664968
Number of successful extensions: 49496
Number of sequences better than 1.0e-020: 33
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 13818923760
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)