TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.723
(715 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR694441.1|DR694441 EST1084533 Normalized pine embryo li... 100 2e-047
gb|DR050199.1|DR050199 RTBOR1_21_H11.g1_A029 Roots plus add... 116 2e-046
gb|DR095364.1|DR095364 STRR1_20_C06.g1_A033 Stem Response R... 75 1e-038
gb|CF393001.1|CF393001 RTDR3_18_E12.g1_A022 Loblolly pine r... 106 8e-037
gb|CO369078.1|CO369078 RTK1_44_F12.g1_A029 Roots minus pota... 106 8e-037
gb|DR097306.1|DR097306 STRR1_33_G07.g3_A033 Stem Response R... 101 6e-036
gb|DR095290.1|DR095290 STRR1_20_C06.b1_A033 Stem Response R... 107 8e-036
gb|DT631829.1|DT631829 EST1146760 Normalized pine embryo li... 80 2e-035
gb|CX713279.1|CX713279 RTPQ1_8_D01.b1_A032 Roots treated wi... 104 8e-034
gb|CF670190.1|CF670190 RTCNT1_48_D08.g1_A029 Root control P... 112 3e-033
gb|CO165762.1|CO165762 FLD1_56_G11.g1_A029 Root flooded Pin... 98 4e-033
gb|DR091162.1|DR091162 RTAL1_19_F09.g1_A029 Roots plus adde... 112 2e-031
gb|DR053203.1|DR053203 RTCA1_9_D06.g1_A029 Roots minus calc... 101 3e-031
gb|CX651686.1|CX651686 COLD1_54_D03.b1_A029 Root cold Pinus... 100 3e-031
gb|CO365529.1|CO365529 RTK1_17_C10.g1_A029 Roots minus pota... 112 9e-031
gb|DR166003.1|DR166003 RTPHOS1_8_E04.g1_A029 Roots minus ph... 112 1e-030
gb|DR097217.1|DR097217 STRR1_33_G07.b1_A033 Stem Response R... 108 6e-030
gb|CF479079.1|CF479079 RTWW3_21_F03.g1_A022 Well-watered lo... 122 8e-030
gb|CF389628.1|CF389628 RTDR2_8_B11.g1_A021 Loblolly pine ro... 79 4e-029
gb|CO157755.1|CO157755 FLD1_1_H02.g1_A029 Root flooded Pinu... 116 5e-029
gb|DR071226.1|DR071226 RTDK1_18_B02.g1_A029 Roots, dark Pin... 116 5e-029
gb|BF518099.1|BF518099 NXSI_035_A04_F NXSI (Nsf Xylem Side ... 122 2e-027
gb|BQ703142.1|BQ703142 NXSI_137_A09_F NXSI (Nsf Xylem Side ... 122 3e-027
gb|DR012422.1|DR012422 HEAT1_12_E12.g1_A029 Root at 37 C fo... 68 5e-027
gb|CO157756.1|CO157756 FLD1_1_H03.g1_A029 Root flooded Pinu... 119 2e-026
gb|AW784002.1|AW784002 NXNV_096_G04_F Nsf Xylem Normal wood... 118 3e-026
gb|BX679820.1|BX679820 BX679820 RS Pinus pinaster cDNA clon... 74 6e-026
gb|DR050119.1|DR050119 RTBOR1_21_H11.b1_A029 Roots plus add... 116 2e-025
gb|CX713355.1|CX713355 RTPQ1_8_D01.g1_A032 Roots treated wi... 104 3e-025
gb|DR695245.1|DR695245 EST1085338 Normalized pine embryo li... 80 3e-025
gb|BX681875.1|BX681875 BX681875 RS Pinus pinaster cDNA clon... 98 6e-025
gb|DR020687.1|DR020687 STRS1_38_D07.g1_A034 Shoot tip pitch... 98 6e-025
gb|DR100644.1|DR100644 STRR1_66_D11.b1_A033 Stem Response R... 113 2e-024
gb|CO363849.1|CO363849 RTK1_12_E06.b1_A029 Roots minus pota... 112 3e-024
gb|CO365399.1|CO365399 RTK1_25_B06.g1_A029 Roots minus pota... 112 3e-024
gb|CO365443.1|CO365443 RTK1_17_C10.b1_A029 Roots minus pota... 112 3e-024
gb|CO369002.1|CO369002 RTK1_44_F12.b1_A029 Roots minus pota... 112 3e-024
gb|DR017548.1|DR017548 STRS1_17_B02.b1_A034 Shoot tip pitch... 112 3e-024
gb|DR017625.1|DR017625 STRS1_17_B02.g1_A034 Shoot tip pitch... 112 3e-024
gb|CO165691.1|CO165691 FLD1_56_G11.b1_A029 Root flooded Pin... 98 4e-024
gb|CO365327.1|CO365327 RTK1_25_B06.b1_A029 Roots minus pota... 110 1e-023
gb|DT638906.1|DT638906 EST1153837 Normalized pine embryo li... 70 1e-023
gb|AI725280.1|AI725280 1146 PtIFG2 Pinus taeda cDNA clone 9... 110 1e-023
gb|BG040229.1|BG040229 NXSI_110_A07_F NXSI (Nsf Xylem Side ... 109 2e-023
gb|CF389519.1|CF389519 RTDR2_8_B11.b1_A021 Loblolly pine ro... 109 2e-023
gb|DR091080.1|DR091080 RTAL1_19_F09.b1_A029 Roots plus adde... 109 2e-023
gb|DR019406.1|DR019406 STRS1_29_F12.g1_A034 Shoot tip pitch... 59 2e-023
gb|DR059299.1|DR059299 RTNIT1_16_H03.g1_A029 Roots minus ni... 98 2e-023
gb|DT633135.1|DT633135 EST1148066 Normalized pine embryo li... 58 4e-023
gb|CO368589.1|CO368589 RTK1_41_C07.g1_A029 Roots minus pota... 100 9e-023
gb|BF609771.1|BF609771 NXSI_050_C01_F NXSI (Nsf Xylem Side ... 66 1e-022
gb|DR685801.1|DR685801 EST1075878 Normalized pine embryo li... 55 4e-022
gb|DR019332.1|DR019332 STRS1_29_F12.b1_A034 Shoot tip pitch... 100 1e-020
gb|CX651712.1|CX651712 COLD1_54_G01.b1_A029 Root cold Pinus... 67 1e-020
gb|CX651761.1|CX651761 COLD1_54_D03.g1_A029 Root cold Pinus... 100 2e-020
gb|DR694995.1|DR694995 EST1085088 Normalized pine embryo li... 70 4e-020
gb|BQ633982.1|BQ633982 NXRV063_D02_F NXRV (Nsf Xylem Root w... 88 9e-020
gb|CF663944.1|CF663944 RTCNT1_6_E05.b1_A029 Root control Pi... 96 3e-019
gb|CO364433.1|CO364433 RTK1_15_E04.g1_A029 Roots minus pota... 94 1e-018
gb|BG317563.1|BG317563 NXPV_003_C07_F NXPV (Nsf Xylem Plani... 73 2e-012
gb|AW888102.1|AW888102 NXNV_129_B12_F Nsf Xylem Normal wood... 71 1e-011
gb|DR081033.1|DR081033 RTFEPL1_26_H08.g1_A029 Roots plus ad... 69 3e-011
gb|CX713122.1|CX713122 RTPQ1_7_D07.b1_A032 Roots treated wi... 46 4e-010
gb|CR392268.1|CR392268 CR392268 RN Pinus pinaster cDNA clon... 63 2e-009
gb|CF478983.1|CF478983 RTWW3_21_F03.b1_A022 Well-watered lo... 62 4e-009
gb|CX713204.1|CX713204 RTPQ1_7_D07.g1_A032 Roots treated wi... 46 4e-009
gb|BQ696016.1|BQ696016 NXPV_035_D12_F NXPV (Nsf Xylem Plani... 46 2e-008
gb|DR177283.1|DR177283 RTMNUT1_4_H01.b1_A029 Roots minus mi... 57 2e-007
gb|CX651789.1|CX651789 COLD1_54_G01.g1_A029 Root cold Pinus... 52 3e-006
gb|CV031738.1|CV031738 RTNACL1_3_H12.b1_A029 Roots plus add... 35 5e-004
gb|CX652537.1|CX652537 COLD1_59_F02.g1_A029 Root cold Pinus... 41 8e-004
gb|BQ696025.1|BQ696025 NXPV_035_E08_F NXPV (Nsf Xylem Plani... 31 0.009
gb|BQ696247.1|BQ696247 NXPV_037_A12_F NXPV (Nsf Xylem Plani... 31 0.009
gb|AY867567.1| Pinus taeda isolate FBRC1 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867568.1| Pinus taeda isolate FBRC2 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867569.1| Pinus taeda isolate FBRC3 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867570.1| Pinus taeda isolate FBRC4 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867571.1| Pinus taeda isolate FBRC5 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867572.1| Pinus taeda isolate FBRC6 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867573.1| Pinus taeda isolate FBRC7 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867574.1| Pinus taeda isolate FBRC8 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867575.1| Pinus taeda isolate FBRC9 dehydrin 1 (dhn-1)... 31 0.011
gb|AY867576.1| Pinus taeda isolate FBRC10 dehydrin 1 (dhn-1... 31 0.011
gb|AY867577.1| Pinus taeda isolate FBRC11 dehydrin 1 (dhn-1... 31 0.011
gb|AY867578.1| Pinus taeda isolate FBRC12 dehydrin 1 (dhn-1... 31 0.011
gb|AY867579.1| Pinus taeda isolate FBRC13 dehydrin 1 (dhn-1... 31 0.011
gb|AY867581.1| Pinus taeda isolate FBRC15 dehydrin 1 (dhn-1... 31 0.011
gb|AY867582.1| Pinus taeda isolate FBRC16 dehydrin 1 (dhn-1... 31 0.011
gb|AY867583.1| Pinus taeda isolate FBRC17 dehydrin 1 (dhn-1... 31 0.011
gb|AY867584.1| Pinus taeda isolate FBRC18 dehydrin 1 (dhn-1... 31 0.011
gb|AY867585.1| Pinus taeda isolate FBRC19 dehydrin 1 (dhn-1... 31 0.011
gb|AY867586.1| Pinus taeda isolate FBRC20 dehydrin 1 (dhn-1... 31 0.011
gb|AY867587.1| Pinus taeda isolate FBRC21 dehydrin 1 (dhn-1... 31 0.011
gb|AY867588.1| Pinus taeda isolate FBRC22 dehydrin 1 (dhn-1... 31 0.011
gb|AY867589.1| Pinus taeda isolate FBRC23 dehydrin 1 (dhn-1... 31 0.011
gb|AY867590.1| Pinus taeda isolate FBRC24 dehydrin 1 (dhn-1... 31 0.011
gb|AY867591.1| Pinus taeda isolate FBRC25 dehydrin 1 (dhn-1... 31 0.011
gb|AY867593.1| Pinus taeda isolate FBRC27 dehydrin 1 (dhn-1... 31 0.011
gb|AY867595.1| Pinus taeda isolate FBRC29 dehydrin 1 (dhn-1... 31 0.011
gb|AY867596.1| Pinus taeda isolate FBRC30 dehydrin 1 (dhn-1... 31 0.011
gb|AY867597.1| Pinus taeda isolate FBRC31 dehydrin 1 (dhn-1... 31 0.011
gb|CO199097.1|CO199097 GEO1_18_F12.g1_A029 Root gravitropis... 31 0.011
gb|AY867594.1| Pinus taeda isolate FBRC28 dehydrin 1 (dhn-1... 31 0.011
gb|DR388209.1|DR388209 RTHG1_26_G02.g1_A029 Roots plus adde... 31 0.014
gb|DR053121.1|DR053121 RTCA1_9_D06.b1_A029 Roots minus calc... 38 0.088
gb|DR018895.1|DR018895 STRS1_26_B08.g1_A034 Shoot tip pitch... 37 0.17
gb|AY867580.1| Pinus taeda isolate FBRC14 dehydrin 1 (dhn-1... 29 0.40
gb|AY867592.1| Pinus taeda isolate FBRC26 dehydrin 1 (dhn-1... 29 0.40
gb|AY867598.1| Pinus taeda isolate FBRC32 dehydrin 1 (dhn-1... 29 0.40
gb|DR011117.1|DR011117 HEAT1_3_C07.g1_A029 Root at 37 C for... 29 0.48
gb|DT632773.1|DT632773 EST1147704 Normalized pine embryo li... 29 0.52
gb|DR685444.1|DR685444 EST1075521 Normalized pine embryo li... 29 0.53
gb|DN613446.1|DN613446 EST966496 Subtracted pine embryo lib... 28 1.0
gb|DT628622.1|DT628622 EST1155192 Subtracted pine embryo li... 28 1.0
gb|BE997181.1|BE997181 NXCI_107_C12_F NXCI (Nsf Xylem Compr... 29 1.3
gb|CX715375.1|CX715375 RTPQ1_33_F04.g1_A032 Roots treated w... 34 1.5
gb|CF472766.1|CF472766 RTDS1_11_D02.g1_A015 Drought-stresse... 25 2.3
gb|CF472685.1|CF472685 RTDS1_11_D02.b1_A015 Drought-stresse... 25 2.4
gb|CV034287.1|CV034287 RTNACL1_39_H11.g1_A029 Roots plus ad... 29 3.6
gb|DR687832.1|DR687832 EST1077915 Normalized pine embryo li... 32 4.0
gb|DR689728.1|DR689728 EST1079814 Normalized pine embryo li... 32 4.0
gb|DT634456.1|DT634456 EST1149387 Normalized pine embryo li... 32 4.0
gb|BM158616.1|BM158616 NXLV_036_H12_F NXLV (Nsf Xylem Late ... 32 5.5
gb|CF385981.1|CF385981 RTDR1_7_E07.g1_A015 Loblolly pine ro... 32 5.5
gb|CF387087.1|CF387087 RTDR1_10_C07.g1_A015 Loblolly pine r... 32 5.5
gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control P... 32 5.5
gb|BX682036.1|BX682036 BX682036 RS Pinus pinaster cDNA clon... 32 5.5
gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control ... 32 5.5
gb|CV033205.1|CV033205 RTNACL1_33_B10.b1_A029 Roots plus ad... 32 5.5
gb|CX645779.1|CX645779 COLD1_5_F07.b1_A029 Root cold Pinus ... 32 5.5
gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch... 32 5.5
gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch... 32 5.5
gb|DR049066.1|DR049066 RTBOR1_13_C03.b1_A029 Roots plus add... 32 5.5
gb|DR051169.1|DR051169 RTBOR1_28_D06.b1_A029 Roots plus add... 32 5.5
gb|DR094529.1|DR094529 STRR1_15_D08.b1_A033 Stem Response R... 32 5.5
gb|DR094610.1|DR094610 STRR1_15_D08.g1_A033 Stem Response R... 32 5.5
gb|DR386116.1|DR386116 RTHG1_13_B12.b1_A029 Roots plus adde... 32 5.5
gb|DT633535.1|DT633535 EST1148466 Normalized pine embryo li... 32 5.5
>gb|DR694441.1|DR694441 EST1084533 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC49 3' end, mRNA sequence
Length = 824
Score = 100 bits (213), Expect(4) = 2e-047
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = +2 / +2
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ + HP+ FDFY+C+H G++GT++PTHYHVL D+ FS+DE++
Sbjct: 563 QRTKSGNVPPGTVVDTVIVHPRQFDFYLCSHNGLLGTSKPTHYHVLWDDNRFSSDELETL 742
Query: 692 VHSLSYVY 715
+++L Y +
Sbjct: 743 INNLCYTF 766
Score = 58.3 bits (121), Expect(4) = 2e-047
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +2 / +2
Query: 302 ESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIV 481
+ L+D Y + K+ P+ I+ FRDGVSESQF V+N EL+ + EA P ++
Sbjct: 341 KELLDDYFKANKKLPDRILFFRDGVSESQFDMVLNQELEALREAVAHFKNYNPPVSFIVA 520
Query: 482 AQKNHHTKF 508
+++H F
Sbjct: 521 QKRHHTRLF 547
Score = 47.3 bits (97), Expect(3) = 3e-011
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -1 / -2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+N+ L+ E ++ +NM++ G + P M +E+++ M N +HHS+R+NI
Sbjct: 748 VNQGFQLIRTEAVIIPENMVMSGLASAQKPIMAAQIEIKLSWMNNDCVHHSARRNI 581
Score = 46.4 bits (95), Expect(4) = 2e-047
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
YL NL +KINAK+GG N+ L S +P + +G DV+H G A V
Sbjct: 65 YLANLALKINAKVGGSNAALLHSLSRQLPRFGSDHVMYIGADVNHPGSGDSTSPSIAAV 241
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -2 / -3
Query: 678 SSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
SS K +SS RT * VGL+VP P H *KS G +STTVPG TL
Sbjct: 729 SSELKRLSSQRTW**VGLLVPRSPLWLHR*KSNCRG*TMTVSTTVPGGTL 580
Score = 40.5 bits (82), Expect(4) = 2e-047
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PS+AAVV S WP +RY A V QS R+E + L
Sbjct: 224 PSIAAVVGSINWPWCNRYNARVCYQSHRVEHIQQL 328
Score = 33.1 bits (66), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3 / -1
Query: 647 EHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHC 528
EH + WA + + T R+++ D + PPQ QEEHC
Sbjct: 698 EHGNEWAC*CPEAHYGCTDRNQTVVDEQ*LCPPQCQEEHC 579
Score = 31.8 bits (63), Expect(3) = 3e-011
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 432 ASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
AS+ S+S L T N*LSLTPSLK + SG
Sbjct: 471 ASLRASNSWLRTISN*LSLTPSLKKSILSG 382
Score = 30.4 bits (60), Expect(2) = 0.010
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 449 EKWSPKFTVIVAQKNHHTKFF 511
+ ++P + IVAQK HHT+ F
Sbjct: 485 KNYNPPVSFIVAQKRHHTRLF 547
Score = 29.0 bits (57), Expect(3) = 3e-011
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2 / -3
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS P M + G D S PP+ A IF +KL+RY
Sbjct: 192 TSAPMYMTWSLPNLGNWRDKL*RSAALLPPTLAFIFNAKLARY 64
Score = 28.1 bits (55), Expect(2) = 0.010
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 529 QCSSWNCGG 555
QCSSW+CGG
Sbjct: 580 QCSSWHCGG 606
>gb|DR050199.1|DR050199 RTBOR1_21_H11.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_21_H11_A029 5', mRNA sequence
Length = 830
Score = 116 bits (248), Expect(4) = 2e-046
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = +2 / +2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
++ + +H NV PGT+VD+++CHP+NFDFY+C AG IGT+RPTHYHVL D
Sbjct: 380 LIVAQKNHHTKLFPTGQGNVQPGTIVDAQICHPRNFDFYLCPQAGPIGTSRPTHYHVLLD 559
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F+ D++Q VH+LSYVY
Sbjct: 560 ENSFTVDDLQILVHALSYVY 619
Score = 99.1 bits (210), Expect = 3e-020
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +2 / +2
Query: 335 KRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQ 514
+RKP+ +IIFRDGVSESQF QV+N+EL I++AC +++ + PK T+IVAQKNHHTK F
Sbjct: 242 ERKPQQMIIFRDGVSESQFDQVLNVELQAILKACNDIEDGYRPKVTLIVAQKNHHTKLFP 421
Query: 515 T 517
T
Sbjct: 422 T 424
Score = 68.9 bits (144), Expect(4) = 2e-046
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
D PS++AVV+SR+WPLISRYRASV TQS ++EM+ +L K T D
Sbjct: 41 DSPSISAVVASREWPLISRYRASVRTQSPKVEMIEALHKQSPTGKD 178
Score = 65.2 bits (136), Expect(4) = 7e-033
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1 / -2
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFS 338
++L V++LL NN G ++ +TCL+ +QLN+ DL KL FTDSI EN+++ W S
Sbjct: 418 EQLRVMILLRNNQCNFGPITILYVITCLEYSLQLNIQDLVKLRFTDSISENDHLLWLS 245
Score = 56.5 bits (117), Expect = 2e-007
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -2 / -3
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
FF ATI V LG SS +LHA I +S TW N SLTPSLK+I+C GF
Sbjct: 399 FFCATINVTLGL*PSSMSLHALSIACNSTFKTWSNCDSLTPSLKMIICCGF 247
Score = 54.2 bits (112), Expect(4) = 7e-033
Identities = 35/62 (56%), Positives = 36/62 (58%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D+ T SS K SS T * VG VPI PA H *KSKFLG Q ST VPG
Sbjct: 618 YT*DNAWTKI*RSSTVKLFSSSNTW**VGREVPIGPA*GHK*KSKFLG*QI*ASTIVPGC 439
Query: 534 TL 529
TL
Sbjct: 438 TL 433
Score = 49.2 bits (101), Expect(4) = 7e-033
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -2 / -3
Query: 252 IISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
IIS+L D V T+ALYL+I+GH RE TTA EG S
Sbjct: 141 IISTLGDCVLTEALYLDIKGHSREATTAEIEGES 40
Score = 30.9 bits (61), Expect(4) = 2e-046
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +3 / +3
Query: 339 ENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHV 437
E+ N * FS MESV +L RS LS SRHV
Sbjct: 246 ESHNK*SFSEMESVNRNLTRS*MLSCRLYSRHV 344
Score = 27.6 bits (54), Expect(4) = 7e-033
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIP 118
+CPG PC+TS+P
Sbjct: 39 ACPGEPCDTSMP 4
Score = 26.3 bits (51), Expect(4) = 2e-046
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 119 GMDVSHGHPG 148
GMDVSHG PG
Sbjct: 5 GMDVSHGSPG 34
>gb|DR095364.1|DR095364 STRR1_20_C06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_C06_A033 5', mRNA sequence
Length = 870
Score = 74.8 bits (157), Expect(3) = 1e-038
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = +2 / +2
Query: 338 RKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+KP+ II +RDGVSE QF QV+ EL+ I AC +DE + P T IV QK HHT F
Sbjct: 572 QKPKRIIFYRDGVSEGQFYQVLLDELEAIHRACMSIDEDYQPPVTFIVVQKRHHTHLF 745
Score = 65.2 bits (136), Expect(3) = 1e-038
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
Y+ N+ +KIN K GG N++L I VS VPTII G DV+H HPG+D A V
Sbjct: 221 YMANVALKINVKAGGRNTVLVDALRGRISLVSDVPTIIFGADVTHPHPGEDTSPSIAAVV 400
Query: 182 SRQ 190
+ Q
Sbjct: 401 ASQ 409
Score = 62.0 bits (129), Expect(3) = 1e-038
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAG 610
N+LPGTVVDS +CHP FDFY+C+HAG
Sbjct: 788 NILPGTVVDSTICHPTEFDFYLCSHAG 868
Score = 48.3 bits (99), Expect = 6e-005
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDDGLIRESLI 313
PS+AAVV+S+ WP +++Y V Q+ R EM+ LFK G I S+I
Sbjct: 380 PSIAAVVASQDWPEVTKYVGLVSAQAHRQEMIEDLFKVVKDPKRGAIIRSMI 535
Score = 34.5 bits (69), Expect(3) = 1e-007
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / -1
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
T A +S PG* TS P ++VGT T I ++ S F PP+ IF + + Y
Sbjct: 396 TAAMDGLVSSPG*G*VTSAPNIIVGTSLTRDILPLRASTSTVFLPPALTFIFKATFAMY 220
Score = 32.7 bits (65), Expect(3) = 1e-007
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = -2 / -1
Query: 489 F*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
F* TI V G SS ++ A + S+S TW N SLTPSL ++ GF
Sbjct: 723 F*TTIKVTGG**SSSIDMQALCMASNSSSRTW*NCPSLTPSL*KMILLGF 574
Score = 28.6 bits (56), Expect(3) = 1e-007
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 612 IPACAHM*KSKFLGWQTLLSTTVPGRTL 529
IPA *KS +G Q + STTVPG L
Sbjct: 870 IPA*LQR*KSNSVG*QIVESTTVPGNML 787
>gb|CF393001.1|CF393001 RTDR3_18_E12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_18_E12_A022 5', mRNA
sequence
Length = 748
Score = 106 bits (226), Expect(2) = 8e-037
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 531 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 710
Query: 671 ADEMQEFVHSL 703
AD +Q ++L
Sbjct: 711 ADGLQSLTNNL 743
Score = 78.5 bits (165), Expect(2) = 7e-018
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 231 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 410
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 411 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 545
Score = 69.8 bits (146), Expect(2) = 8e-037
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 3 YLANVALKINVKVGGRNTVLVDALSRRIPLVSDKPTIIFGADVTHPHPGEDSSPSIAAVV 182
Query: 182 SRQ 190
+ Q
Sbjct: 183 ASQ 191
Score = 61.1 bits (127), Expect(3) = 8e-021
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 724 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 578
Score = 43.7 bits (89), Expect(2) = 2e-006
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 162 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 272
Score = 42.3 bits (86), Expect(3) = 8e-021
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VG T GI D+++ F PP+F LI + +RY
Sbjct: 154 SSPGCGWVTSAPKIIVGLSLTKGILLDSASTKTVFLPPTFTLILRATFARY 2
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 725 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 582
Score = 37.3 bits (75), Expect(3) = 8e-021
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 526 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 359
Score = 31.8 bits (63), Expect(2) = 7e-018
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 584 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 688
Score = 29.9 bits (59), Expect(2) = 2e-006
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3 / +1
Query: 552 WIVKFAILRTSTSTCVHMLG*LEQQGPPTIMF 647
WI KFAI + T T ML E G P IMF
Sbjct: 592 WIPKFAIQQNLTFTSAAMLVFRELVGLPIIMF 687
>gb|CO369078.1|CO369078 RTK1_44_F12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_44_F12_A029 5', mRNA sequence
Length = 779
Score = 106 bits (226), Expect(2) = 8e-037
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 565 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 744
Query: 671 ADEMQEFVHSL 703
AD +Q ++L
Sbjct: 745 ADGLQSLTNNL 777
Score = 78.5 bits (165), Expect(2) = 7e-018
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 265 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 444
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 445 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 579
Score = 69.8 bits (146), Expect(2) = 8e-037
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 37 YLANVALKINVKVGGRNTVLVDALSRRIPLVSDKPTIIFGADVTHPHPGEDSSPSIAAVV 216
Query: 182 SRQ 190
+ Q
Sbjct: 217 ASQ 225
Score = 61.1 bits (127), Expect(3) = 9e-021
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 758 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 612
Score = 43.7 bits (89), Expect(2) = 2e-006
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 196 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 306
Score = 42.3 bits (86), Expect(3) = 9e-021
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VG T GI D+++ F PP+F LI + +RY
Sbjct: 188 SSPGCGWVTSAPKIIVGLSLTKGILLDSASTKTVFLPPTFTLILRATFARY 36
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 759 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 616
Score = 37.3 bits (75), Expect(3) = 9e-021
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 560 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 393
Score = 31.8 bits (63), Expect(2) = 7e-018
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 618 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 722
Score = 29.9 bits (59), Expect(2) = 2e-006
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3 / +2
Query: 552 WIVKFAILRTSTSTCVHMLG*LEQQGPPTIMF 647
WI KFAI + T T ML E G P IMF
Sbjct: 626 WIPKFAIQQNLTFTSAAMLVFRELVGLPIIMF 721
>gb|DR097306.1|DR097306 STRR1_33_G07.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_G07_A033 5', mRNA sequence
Length = 840
Score = 101 bits (216), Expect(2) = 6e-036
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
NH + N+LPGTVVDS +CHP DFY+C+HAG+ GT+ P HYHVL D+ F+
Sbjct: 296 NHRDRNSVDKRSGNILPGTVVDSTICHPTELDFYLCSHAGIHGTSTPAHYHVLWDDNTFT 475
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 476 ADALQSLTNNLCYTY 520
Score = 69.3 bits (145), Expect(2) = 6e-036
Identities = 29/64 (45%), Positives = 39/64 (60%)
Frame = +2 / +2
Query: 320 YTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHH 499
+ ++ +KP II + DGVSE QF QV+ EL+ I AC +D + P T IV QK HH
Sbjct: 98 FYTATSQKPMRIIFYIDGVSEGQFYQVLLDELEAIRRACMSIDNDYQPPVTFIVVQKRHH 277
Query: 500 TKFF 511
T+ F
Sbjct: 278 TRLF 289
Score = 47.3 bits (97), Expect(2) = 7e-008
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C +SA +SS RT** G++VP IPA *KS +G Q + STTVPG L
Sbjct: 489 CKASAVNVLSSHRT***AGVLVP*IPA*LQR*KSNSVG*QIVESTTVPGNML 334
Score = 35.9 bits (72), Expect = 0.31
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L +C E ++ QNMI+ CS + SM VE+ M N I++S+
Sbjct: 490 LQSICSECIIIPQNMIMSWRACSMNTSMTAKVEI*FGWMTNCGINNST 347
Score = 34.1 bits (68), Expect = 1.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1 / +1
Query: 562 SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+L S +R L + +CW WN A LSCS
Sbjct: 367 NLSSNRIRFLPLQSCWYSWNKHASSLSCS 453
Score = 29.0 bits (57), Expect(2) = 7e-008
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -2 / -1
Query: 489 F*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
F* TI V G S ++ A + S+S TW N SLTPS+ ++ GF
Sbjct: 267 F*TTIKVTGG**SLSIDMQALRMASNSSSRTW*NCPSLTPSM*KMILIGF 118
>gb|DR095290.1|DR095290 STRR1_20_C06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_C06_A033 3', mRNA sequence
Length = 806
Score = 107 bits (228), Expect(2) = 8e-036
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +2 / +3
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDS +CHP FDFY+C+HAG+ GT+RP HYHVL D+ FSAD +Q ++L Y
Sbjct: 192 NILPGTVVDSTICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDDNRFSADALQSLTNNLCY 371
Query: 710 VY 715
Y
Sbjct: 372 TY 377
Score = 63.4 bits (132), Expect(2) = 8e-036
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +2 / +3
Query: 365 RDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
RDGVSE QF QV+ EL+ I AC +DE + P T IV QK HHT F
Sbjct: 3 RDGVSEGQFYQVLLDELEAIHRACMSIDEDYQPPVTFIVVQKRHHTHLF 149
Score = 47.8 bits (98), Expect(2) = 1e-008
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C +SA +SS RT** GL+VP IPA *KS +G Q + STTVPG L
Sbjct: 346 CKASALNLLSSHRT***AGLLVP*IPA*LQR*KSNSVG*QIVESTTVPGNML 191
Score = 43.2 bits (88), Expect = 0.002
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L +C E+ ++ QNMI+ P CS + SM VE+++ M N I++ +
Sbjct: 347 LQSICTESIIIPQNMIMSWPACSLNTSMTAKVEIKLCWMTNCGINNGT 204
Score = 30.9 bits (61), Expect(2) = 1e-008
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 489 F*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
F* TI V G SS ++ A + S+S TW N SLTPSL
Sbjct: 127 F*TTIKVTGG**SSSIDMQALCMASNSSSRTW*NCPSLTPSL 2
>gb|DT631829.1|DT631829 EST1146760 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFD23 3' end, mRNA sequence
Length = 817
Score = 79.9 bits (168), Expect(3) = 2e-035
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPG 148
YL N+ +KINAK+GGLNS+L VE + IP +S PTII+GMDVSHG PG
Sbjct: 411 YLTNVALKINAKVGGLNSVLSVEFAHRIPKISMKPTIIIGMDVSHGSPG 557
Score = 73.5 bits (154), Expect(3) = 2e-035
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +2 / +3
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
D PS++AVVSSR+WPLISRYRASV TQS ++EM+ +L+KP + D
Sbjct: 564 DSPSISAVVSSREWPLISRYRASVRTQSPKVEMIEALYKPLPSGKD 701
Score = 58.8 bits (122), Expect(3) = 9e-021
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
+CPG PCETSIP ++VG + GI ST E RPP+FA IF + RY
Sbjct: 562 ACPGEPCETSIPIIIVGFIEILGILCANSTDKTELRPPTFAFIFKATFVRY 410
Score = 47.3 bits (97), Expect(3) = 9e-021
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -2 / -1
Query: 270 GLNNEDIISSLADWVCTDALYLEIRGH*RELTTAATEGLS 151
GL IIS+L D V T+ALYLEI+GH + TTA EG S
Sbjct: 682 GLYKASIISTLGD*VLTEALYLEIKGHSLDETTAEIEGES 563
Score = 34.5 bits (69), Expect = 0.81
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQI 11
+SW TM*NIH ++ + ++ Y R F+ Q RV+ T L I I
Sbjct: 560 MSWRTM*NIHPNNNCWFH*NLRYPMRKFHRQNRVEATNLRIYFQSHI 420
Score = 34.1 bits (68), Expect(3) = 2e-035
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2 / +3
Query: 335 KRKPEHIIIFRDGVSES 385
+RKP+ +I+FRDGVSES
Sbjct: 765 ERKPQQMIVFRDGVSES 815
Score = 31.3 bits (62), Expect(3) = 9e-021
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 381 SLTPSLKIIMCSGFR 337
SLTPSLK I+C GFR
Sbjct: 811 SLTPSLKTIICCGFR 767
>gb|CX713279.1|CX713279 RTPQ1_8_D01.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_8_D01_A032 3', mRNA sequence
Length = 821
Score = 104 bits (221), Expect(3) = 8e-034
Identities = 35/63 (55%), Positives = 51/63 (80%)
Frame = +2 / -3
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
DN+ PGTVVD+ + HP+ FDFY+C+H+G+ GT+RPTHYHVL DE F +DE+Q+ +++L
Sbjct: 435 DNIPPGTVVDTLITHPREFDFYLCSHSGIKGTSRPTHYHVLWDENNFLSDELQQLINNLC 256
Query: 707 YVY 715
Y +
Sbjct: 255 YTF 247
Score = 60.2 bits (125), Expect = 2e-008
Identities = 30/53 (56%), Positives = 34/53 (64%)
Frame = -2 / +2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLS 526
C SS K SS T**WVGL+VP++P H *KS LG +STTVPG LS
Sbjct: 278 CSSSDRKLFSSHNT**WVGLLVPLMPEWLHK*KSNSLGCVIRVSTTVPGGILS 436
Score = 46.9 bits (96), Expect(3) = 8e-034
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 308 LIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACK 439
L++ Y K+ P+ I+ FRDGVSE QF +V+ EL + ACK
Sbjct: 756 LLEDYRDEIKQLPKRILFFRDGVSEGQFYKVLEEELRALKAACK 625
Score = 40.5 bits (82), Expect = 0.013
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = -1 / +1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++KLL L+ + + Q+MI+G C+ M V+V+ M + +IH+SS +NIV
Sbjct: 265 VDKLLQLIR*KIIFIPQHMIMGWSACAFDA*MAAQVKVKFSWMCD*SIHYSSWRNIV 435
Score = 35.0 bits (70), Expect = 0.59
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3 / -1
Query: 522 HQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSL 692
H+T+F EL WI+ I T TC + Q P IM C + + C SL
Sbjct: 440 HKTIFLQEL*WIL*SHIQENLTFTCAAIQASKAQADQPIIMCCGMKIIFYLMSCSSL 270
Score = 30.9 bits (61), Expect(3) = 8e-034
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2 / -3
Query: 449 EKWSPKFTVIVAQKNHHTKFFQT 517
E ++P T V QK HHT+ F +
Sbjct: 618 ENYNPTITFAVVQKRHHTRLFHS 550
>gb|CF670190.1|CF670190 RTCNT1_48_D08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_48_D08_A029 5', mRNA sequence
Length = 797
Score = 112 bits (239), Expect(2) = 3e-033
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 492 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 671
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 672 ADGLQSLTNNLCYTY 716
Score = 78.5 bits (165), Expect(2) = 7e-018
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 192 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 371
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 372 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 506
Score = 61.1 bits (127), Expect(2) = 2e-014
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 685 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 539
Score = 51.9 bits (107), Expect(2) = 3e-033
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +2 / +3
Query: 41 GGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQ 190
GG N++L S IP VS PTII G DV+H HPG+D A V + Q
Sbjct: 3 GGRNTVLVDALSRRIPLVSDKPTIIFGADVTHPHPGEDSSPSIAAVVASQ 152
Score = 43.7 bits (89), Expect(2) = 2e-006
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 123 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 233
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 686 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 543
Score = 37.3 bits (75), Expect(2) = 2e-014
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -2
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 487 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 320
Score = 31.8 bits (63), Expect(2) = 7e-018
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 545 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 649
Score = 29.9 bits (59), Expect(2) = 2e-006
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3 / +1
Query: 552 WIVKFAILRTSTSTCVHMLG*LEQQGPPTIMF 647
WI KFAI + T T ML E G P IMF
Sbjct: 553 WIPKFAIQQNLTFTSAAMLVFRELVGLPIIMF 648
>gb|CO165762.1|CO165762 FLD1_56_G11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_G11_A029 5', mRNA sequence
Length = 844
Score = 98.2 bits (208), Expect(3) = 4e-033
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2 / +2
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+LPGTVVDS +C PK FDFY+C+HAG+ GT++P HY+VL DE GF+ +++Q
Sbjct: 386 TLKNGNLLPGTVVDSVICQPKIFDFYLCSHAGIKGTSKPAHYNVLQDENGFTPNDIQRLT 565
Query: 695 HSLSYVY 715
+ L + Y
Sbjct: 566 NDLCFTY 586
Score = 55.6 bits (115), Expect = 4e-007
Identities = 29/52 (55%), Positives = 30/52 (57%)
Frame = -2 / -2
Query: 690 NSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
N IS KP SS T * GL+VP IPA *KS LGW STTVPGR
Sbjct: 561 NR*ISFGVKPFSSWSTL**AGLLVPFIPAWLQR*KSNILGWHMTESTTVPGR 406
Score = 45.5 bits (93), Expect(3) = 4e-033
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2 / +2
Query: 272 RGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFL 445
+G G I + L+ + KPE I+ +RDGVS+ QF V+N EL + +A + L
Sbjct: 65 QGRKQTGGIFKELLSSFQERCNTKPERILYYRDGVSDGQFEMVLNNELGALKKAIEAL 238
Score = 35.9 bits (72), Expect(3) = 4e-033
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 458 SPKFTVIVAQKNHHTKFF 511
SPK T IV QK HHT+FF
Sbjct: 308 SPKVTFIVVQKRHHTRFF 361
>gb|DR091162.1|DR091162 RTAL1_19_F09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_19_F09_A029 5', mRNA sequence
Length = 796
Score = 112 bits (239), Expect(2) = 2e-031
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 234 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 413
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 414 ADGLQSLTNNLCYTY 458
Score = 61.1 bits (127), Expect = 8e-009
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 427 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 281
Score = 43.7 bits (89), Expect(2) = 2e-031
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 341 KPEHIIIFRDGVSESQFTQVINIELD 418
KPE II +RDGVSE QF QV+ ELD
Sbjct: 61 KPERIIFYRDGVSEGQFYQVLLYELD 138
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 428 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 285
Score = 37.3 bits (75), Expect(2) = 9e-006
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2 / +3
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
I +AC L+ + P T +V QK HHT+ F D
Sbjct: 141 IRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 248
Score = 31.8 bits (63), Expect(2) = 9e-006
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 287 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 391
>gb|DR053203.1|DR053203 RTCA1_9_D06.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_9_D06_A029 5', mRNA sequence
Length = 708
Score = 101 bits (215), Expect(2) = 3e-031
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 523 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 702
Query: 671 AD 676
AD
Sbjct: 703 AD 708
Score = 78.5 bits (165), Expect(2) = 7e-018
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 223 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 402
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 403 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 537
Score = 58.8 bits (122), Expect(3) = 9e-018
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -2 / -2
Query: 675 SAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 707 SAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 570
Score = 56.1 bits (116), Expect(2) = 3e-031
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +2 / +1
Query: 8 LNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSR 187
L +L+ K+GG N++L S IP VS PTII G DV+H HPG+D A V +
Sbjct: 1 LAMLLLDYVKVGGRNTVLVDALSRRIPLVSDKPTIIFGADVTHPHPGEDSSPSIAAVVAS 180
Query: 188 Q 190
Q
Sbjct: 181 Q 183
Score = 43.7 bits (89), Expect(2) = 2e-006
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 154 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 264
Score = 40.5 bits (82), Expect = 0.013
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1 / -1
Query: 667 ETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 699 EFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 574
Score = 37.3 bits (75), Expect(3) = 9e-018
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -2
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 518 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 351
Score = 34.1 bits (68), Expect(3) = 9e-018
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2 / -2
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSF 34
S PG TS PK++VG T GI D+++ F PP+F
Sbjct: 146 SSPGCGWVTSAPKIIVGLSLTKGILLDSASTKTVFLPPTF 27
Score = 31.8 bits (63), Expect(2) = 7e-018
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 576 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 680
Score = 29.9 bits (59), Expect(2) = 2e-006
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3 / +2
Query: 552 WIVKFAILRTSTSTCVHMLG*LEQQGPPTIMF 647
WI KFAI + T T ML E G P IMF
Sbjct: 584 WIPKFAIQQNLTFTSAAMLVFRELVGLPIIMF 679
>gb|CX651686.1|CX651686 COLD1_54_D03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_54_D03_A029 3', mRNA sequence
Length = 686
Score = 100 bits (213), Expect(2) = 3e-031
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = +2 / -3
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ + HP+ FDFY+C+H G++GT++PTHYHVL D+ FS+DE++
Sbjct: 483 QRTKSGNVPPGTVVDTVIVHPRQFDFYLCSHNGLLGTSKPTHYHVLWDDNRFSSDELETL 304
Query: 692 VHSLSYVY 715
+++L Y +
Sbjct: 303 INNLCYTF 280
Score = 54.7 bits (113), Expect(2) = 3e-031
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +2 / -3
Query: 326 SSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTK 505
SS K+ P+ I+ FRDGVSESQF V+N EL+ + EA P ++ +++H
Sbjct: 681 SSNKKLPDRILFFRDGVSESQFDMVLNQELEALREAVAHFKNYNPPVSFIVAQKRHHTRL 502
Query: 506 F 508
F
Sbjct: 501 F 499
Score = 47.3 bits (97), Expect(2) = 1e-008
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -1 / +1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+N+ L+ E ++ +NM++ G + P M +E+++ M N +HHS+R+NI
Sbjct: 298 VNQGFQLIRTEAVIIPENMVMSGLASAQKPIMAAQIEIKLSWMNNDCVHHSARRNI 465
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -2 / +2
Query: 678 SSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
SS K +SS RT * VGL+VP P H *KS G +STTVPG TL
Sbjct: 317 SSELKRLSSQRTW**VGLLVPRSPLWLHR*KSNCRG*TMTVSTTVPGGTL 466
Score = 33.1 bits (66), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3 / +3
Query: 647 EHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHC 528
EH + WA + + T R+++ D + PPQ QEEHC
Sbjct: 348 EHGNEWAC*CPEAHYGCTDRNQTVVDEQ*LCPPQCQEEHC 467
Score = 31.8 bits (63), Expect(2) = 1e-008
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / +2
Query: 432 ASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
AS+ S+S L T N*LSLTPSLK + SG
Sbjct: 575 ASLRASNSWLRTISN*LSLTPSLKKSILSG 664
Score = 30.4 bits (60), Expect(2) = 0.011
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 449 EKWSPKFTVIVAQKNHHTKFF 511
+ ++P + IVAQK HHT+ F
Sbjct: 561 KNYNPPVSFIVAQKRHHTRLF 499
Score = 28.1 bits (55), Expect(2) = 0.011
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -2
Query: 529 QCSSWNCGG 555
QCSSW+CGG
Sbjct: 466 QCSSWHCGG 440
>gb|CO365529.1|CO365529 RTK1_17_C10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_17_C10_A029 5', mRNA sequence
Length = 831
Score = 112 bits (239), Expect(2) = 9e-031
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 428 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 607
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 608 ADGLQSLTNNLCYTY 652
Score = 78.5 bits (165), Expect(3) = 3e-022
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 128 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 307
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 308 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 442
Score = 61.1 bits (127), Expect(2) = 2e-014
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 621 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 475
Score = 43.7 bits (89), Expect(2) = 9e-031
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 59 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 169
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 622 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 479
Score = 37.3 bits (75), Expect(2) = 2e-014
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 423 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 256
Score = 32.2 bits (64), Expect(3) = 3e-022
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 110 IILGMDVSHGHPGQDRPSVAAVVSSRQ 190
II G DV+H HPG+D A V + Q
Sbjct: 8 IIFGADVTHPHPGEDSSPSIAAVVASQ 88
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 481 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 585
>gb|DR166003.1|DR166003 RTPHOS1_8_E04.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_E04_A029 5', mRNA sequence
Length = 924
Score = 112 bits (239), Expect(2) = 1e-030
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 390 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 569
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 570 ADGLQSLTNNLCYTY 614
Score = 78.5 bits (165), Expect(2) = 7e-018
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 90 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 269
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 270 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 404
Score = 61.1 bits (127), Expect(2) = 2e-014
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 583 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 437
Score = 43.7 bits (89), Expect(2) = 1e-030
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 21 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 131
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 584 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 441
Score = 37.3 bits (75), Expect(2) = 2e-014
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -3
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 385 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 218
Score = 31.8 bits (63), Expect(2) = 7e-018
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 443 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 547
>gb|DR097217.1|DR097217 STRR1_33_G07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_G07_A033 3', mRNA sequence
Length = 857
Score = 108 bits (231), Expect(2) = 6e-030
Identities = 40/75 (53%), Positives = 51/75 (68%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
NH + N+LPGTVVDS +CHP FDFY+C+HAG+ GT+RP HYHVL D+ FS
Sbjct: 112 NHRDRNSVDKRSGNILPGTVVDSTICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDDNRFS 291
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 292 ADALQSLTNNLCYTY 336
Score = 47.8 bits (98), Expect = 8e-005
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
C +SA +SS RT** GL+VP IPA *KS +G Q + STTVPG L
Sbjct: 305 CKASALNLLSSHRT***AGLLVP*IPA*LQR*KSNSVG*QIVESTTVPGNML 150
Score = 43.7 bits (89), Expect = 0.001
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L +C E+ ++ QNMI+ P CS + SM VE+++ M N I++S+
Sbjct: 306 LQSICTESIIIPQNMIMSWPACSLNTSMTAKVEIKLGWMTNCGINNST 163
Score = 42.3 bits (86), Expect(2) = 6e-030
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2 / +1
Query: 410 ELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
EL+ I AC +D + P T IV QK HHT+ F
Sbjct: 4 ELEAIRRACMSIDNDYQPPVTXIVVQKRHHTRLF 105
>gb|CF479079.1|CF479079 RTWW3_21_F03.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_21_F03_A022 5', mRNA sequence
Length = 736
Score = 122 bits (261), Expect(2) = 8e-030
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +2 / +1
Query: 473 VIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLH 652
++ + +H F P NV PGT+VDS++CHP+NFDF++C AG IGT+RPTHYHVL
Sbjct: 241 IVAQKNHHTKLFPGGGGPGNVQPGTIVDSQICHPRNFDFFLCPQAGPIGTSRPTHYHVLL 420
Query: 653 DEIGFSADEMQEFVHSLSYVY 715
DE FS D++Q VH+LSYVY
Sbjct: 421 DENDFSVDDLQILVHALSYVY 483
Score = 95.9 bits (203), Expect(2) = 4e-023
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +2 / +1
Query: 335 KRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+RKP+ +I+FRDGVSESQF QV+N+EL I +AC ++ + PK T+IVAQKNHHTK F
Sbjct: 100 ERKPQQMIVFRDGVSESQFDQVLNVELQAIYKACNHIEAGYKPKITMIVAQKNHHTKLF 276
Score = 75.8 bits (159), Expect(2) = 4e-023
Identities = 39/64 (60%), Positives = 39/64 (60%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D T C SS K SS T**WVG VPI PA H KSKFLGWQ ST VPG
Sbjct: 482 YT*DKAWTRICRSSTLKSFSSSNT**WVGRDVPIGPA*GHKKKSKFLGWQIWESTIVPGC 303
Query: 534 TLSG 523
TL G
Sbjct: 302 TLPG 291
Score = 52.4 bits (108), Expect(2) = 4e-023
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -2 / -3
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFR 337
FF ATI V LG +S LHA I +S TW N SLTPSLK I+C GFR
Sbjct: 257 FFCATIIVILGL*PASM*LHALYIACNSTFRTWSNCDSLTPSLKTIICCGFR 102
Score = 37.3 bits (75), Expect(2) = 6e-004
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -1 / -2
Query: 439 LTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFS 338
+ CL + N+ DL KL FTDSI E+N++ FS
Sbjct: 204 IACLVYSL*FNIQDLVKLRFTDSISEDNHLLRFS 103
Score = 32.2 bits (64), Expect(2) = 4e-023
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3 / +2
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
I +FAIL +CV L E G P IM+ R + CR L + Y C
Sbjct: 323 IPRFAILEILIFSCVLKLAQ*EHHGLPIIMYYWMRMTLVWMTCRFLSMLYPMC 481
Score = 28.1 bits (55), Expect(2) = 0.83
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1 / +3
Query: 565 LPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFLCRRDAGVCSFAILRV 714
LPS*+ V + W + N A+PLSC + C A C IL V
Sbjct: 333 LPS*KF*FFLVSSSWPNRNITAYPLSCITG*E*L*CG*PADSCPCFILCV 482
Score = 28.1 bits (55), Expect(2) = 8e-030
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3 / +2
Query: 336 SENQNT*LFSGMESVKVSLPRSSTLSWIRSSRH 434
+EN++ *L S MESV +L RS L++ +RH
Sbjct: 101 NENRSK*LSSEMESVNRNLTRS*MLNYKLYTRH 199
Score = 27.6 bits (54), Expect(2) = 6e-004
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3 / -1
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
T +I + Q A + S HD+G A++F Q T ++++ *DGK
Sbjct: 481 THRIKHGQESAGHPH*SHSHPVIHDNG*AVMFLLGQLEDTRKNQNF*DGK 332
Score = 25.8 bits (50), Expect(2) = 0.83
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1 / +3
Query: 334 KAKTRTHNYFQGWSQ*KSVYPGHQH*AGSDHRGM 435
+ KT ++ Q WSQ* ++ PG + * S +GM
Sbjct: 99 RTKTAANDCLQRWSQ*IAI*PGPEC*ITSYIQGM 200
>gb|CF389628.1|CF389628 RTDR2_8_B11.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_B11_A021 5', mRNA
sequence
Length = 744
Score = 78.5 bits (165), Expect(2) = 4e-029
Identities = 38/105 (36%), Positives = 52/105 (49%)
Frame = +2 / +2
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 359 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 538
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 539 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 673
Score = 69.8 bits (146), Expect(2) = 4e-029
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 131 YLANVALKINVKVGGRNTVLVDALSRRIPLVSDKPTIIFGADVTHPHPGEDSSPSIAAVV 310
Query: 182 SRQ 190
+ Q
Sbjct: 311 ASQ 319
Score = 43.7 bits (89), Expect(2) = 3e-010
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 290 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 400
Score = 42.8 bits (87), Expect(2) = 3e-010
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHP 574
N+H T N+LPGTVVDSK+CHP
Sbjct: 659 NNHQDRNATDRSGNILPGTVVDSKICHP 742
Score = 42.3 bits (86), Expect(3) = 4e-011
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VG T GI D+++ F PP+F LI + +RY
Sbjct: 282 SSPGCGWVTSAPKIIVGLSLTKGILLDSASTKTVFLPPTFTLILRATFARY 130
Score = 37.3 bits (75), Expect(3) = 4e-011
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -1
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 654 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 487
Score = 27.6 bits (54), Expect(3) = 4e-011
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 576 LGWQTLLSTTVPG 538
+GWQ L STTVPG
Sbjct: 744 VGWQILESTTVPG 706
>gb|CO157755.1|CO157755 FLD1_1_H02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_1_H02_A029 5', mRNA sequence
Length = 706
Score = 116 bits (248), Expect(2) = 5e-029
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = +2 / +2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
++ + +H NV PGT+VD+++CHP+NFDFY+C AG IGT+RPTHYHVL D
Sbjct: 179 LIVAQKNHHTKLFPTGQGNVQPGTIVDAQICHPRNFDFYLCPQAGPIGTSRPTHYHVLLD 358
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F+ D++Q VH+LSYVY
Sbjct: 359 ENSFTVDDLQILVHALSYVY 418
Score = 99.1 bits (210), Expect = 3e-020
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +2 / +2
Query: 335 KRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQ 514
+RKP+ +IIFRDGVSESQF QV+N+EL I++AC +++ + PK T+IVAQKNHHTK F
Sbjct: 41 ERKPQQMIIFRDGVSESQFDQVLNVELQAILKACNDIEDGYRPKVTLIVAQKNHHTKLFP 220
Query: 515 T 517
T
Sbjct: 221 T 223
Score = 58.8 bits (122), Expect(2) = 1e-018
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = -1 / -1
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFS 338
++L V++LL NN G ++ +TCL+ +QLN+ DL KL FTDSI EN+++ S
Sbjct: 217 EQLRVMILLRNNQCNFGPITILYVITCLEYSLQLNIQDLVKLRFTDSISENDHLLRLS 44
Score = 56.5 bits (117), Expect = 2e-007
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -2 / -2
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
FF ATI V LG SS +LHA I +S TW N SLTPSLK+I+C GF
Sbjct: 198 FFCATINVTLGL*PSSMSLHALSIACNSTFKTWSNCDSLTPSLKMIICCGF 46
Score = 54.2 bits (112), Expect(2) = 1e-018
Identities = 35/62 (56%), Positives = 36/62 (58%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D+ T SS K SS T * VG VPI PA H *KSKFLG Q ST VPG
Sbjct: 417 YT*DNAWTKI*RSSTVKLFSSSNTW**VGREVPIGPA*GHK*KSKFLG*QI*ASTIVPGC 238
Query: 534 TL 529
TL
Sbjct: 237 TL 232
Score = 31.3 bits (62), Expect(2) = 5e-029
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3 / +3
Query: 339 ENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHV 437
E++N * FS MESV +L RS LS SRHV
Sbjct: 45 ESRNK*SFSEMESVNRNLTRS*MLSCRLYSRHV 143
>gb|DR071226.1|DR071226 RTDK1_18_B02.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_18_B02_A029 5', mRNA sequence
Length = 700
Score = 116 bits (248), Expect(2) = 5e-029
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = +2 / +2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
++ + +H NV PGT+VD+++CHP+NFDFY+C AG IGT+RPTHYHVL D
Sbjct: 224 LIVAQKNHHTKLFPTGQGNVQPGTIVDAQICHPRNFDFYLCPQAGPIGTSRPTHYHVLLD 403
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F+ D++Q VH+LSYVY
Sbjct: 404 ENSFTVDDLQILVHALSYVY 463
Score = 99.1 bits (210), Expect = 3e-020
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +2 / +2
Query: 335 KRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQ 514
+RKP+ +IIFRDGVSESQF QV+N+EL I++AC +++ + PK T+IVAQKNHHTK F
Sbjct: 86 ERKPQQMIIFRDGVSESQFDQVLNVELQAILKACNDIEDGYRPKVTLIVAQKNHHTKLFP 265
Query: 515 T 517
T
Sbjct: 266 T 268
Score = 58.8 bits (122), Expect(2) = 1e-018
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = -1 / -1
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFS 338
++L V++LL NN G ++ +TCL+ +QLN+ DL KL FTDSI EN+++ S
Sbjct: 262 EQLRVMILLRNNQCNFGPITILYVITCLEYSLQLNIQDLVKLRFTDSISENDHLLRLS 89
Score = 56.5 bits (117), Expect = 2e-007
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -2 / -2
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGF 340
FF ATI V LG SS +LHA I +S TW N SLTPSLK+I+C GF
Sbjct: 243 FFCATINVTLGL*PSSMSLHALSIACNSTFKTWSNCDSLTPSLKMIICCGF 91
Score = 54.2 bits (112), Expect(2) = 1e-018
Identities = 35/62 (56%), Positives = 36/62 (58%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D+ T SS K SS T * VG VPI PA H *KSKFLG Q ST VPG
Sbjct: 462 YT*DNAWTKI*RSSTVKLFSSSNTW**VGREVPIGPA*GHK*KSKFLG*QI*ASTIVPGC 283
Query: 534 TL 529
TL
Sbjct: 282 TL 277
Score = 31.3 bits (62), Expect(2) = 5e-029
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3 / +3
Query: 339 ENQNT*LFSGMESVKVSLPRSSTLSWIRSSRHV 437
E++N * FS MESV +L RS LS SRHV
Sbjct: 90 ESRNK*SFSEMESVNRNLTRS*MLSCRLYSRHV 188
>gb|BF518099.1|BF518099 NXSI_035_A04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_035_A04 5' similar to Arabidopsis thaliana
sequence At5g21150 zwille/pinhead-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 513
Score = 122 bits (261), Expect(2) = 2e-027
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +2 / +1
Query: 473 VIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLH 652
++ + +H F P NV PGT+VDS++CHP+NFDF++C AG IGT+RPTHYHVL
Sbjct: 121 IVAQKNHHTKLFPGGGGPGNVQPGTIVDSQICHPRNFDFFLCPQAGPIGTSRPTHYHVLL 300
Query: 653 DEIGFSADEMQEFVHSLSYVY 715
DE FS D++Q VH+LSYVY
Sbjct: 301 DENDFSVDDLQILVHALSYVY 363
Score = 86.3 bits (182), Expect(2) = 3e-020
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2 / +1
Query: 356 IIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
I+FRDGVSESQF QV+N+EL I +AC ++ + PK T+IVAQKNHHTK F
Sbjct: 1 IVFRDGVSESQFDQVLNVELQAIYKACNHIEAGYKPKITMIVAQKNHHTKLF 156
Score = 75.8 bits (159), Expect(2) = 3e-019
Identities = 39/64 (60%), Positives = 39/64 (60%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D T C SS K SS T**WVG VPI PA H KSKFLGWQ ST VPG
Sbjct: 362 YT*DKAWTRICRSSTLKSFSSSNT**WVGRDVPIGPA*GHKKKSKFLGWQIWESTIVPGC 183
Query: 534 TLSG 523
TL G
Sbjct: 182 TLPG 171
Score = 39.1 bits (79), Expect(2) = 3e-019
Identities = 24/44 (54%), Positives = 26/44 (59%)
Frame = -2 / -2
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLK 361
FF ATI V LG +S LHA I +S TW N SLTPSLK
Sbjct: 137 FFCATIIVILGL*PASM*LHALYIACNSTFRTWSNCDSLTPSLK 6
Score = 32.7 bits (65), Expect(2) = 0.009
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 439 LTCLDDLIQLNVDDLGKLTFTDSIPENN 356
+ CL + N+ DL KL FTDSI E+N
Sbjct: 84 IACLVYSL*FNIQDLVKLRFTDSISEDN 1
Score = 32.2 bits (64), Expect(2) = 3e-020
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3 / +2
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
I +FAIL +CV L E G P IM+ R + CR L + Y C
Sbjct: 203 IPRFAILEILIFSCVLKLAQ*EHHGLPIIMYYWMRMTLVWMTCRFLSMLYPMC 361
Score = 27.6 bits (54), Expect(2) = 0.009
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3 / -3
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
T +I + Q A + S HD+G A++F Q T ++++ *DGK
Sbjct: 361 THRIKHGQESAGHPH*SHSHPVIHDNG*AVMFLLGQLEDTRKNQNF*DGK 212
Score = 21.7 bits (41), Expect(2) = 2e-027
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3 / +2
Query: 357 LFSGMESVKVSLPRSSTLSWIRSSRH 434
L S MESV +L RS L++ +RH
Sbjct: 2 LSSEMESVNRNLTRS*MLNYKLYTRH 79
>gb|BQ703142.1|BQ703142 NXSI_137_A09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_137_A09 5' similar to Arabidopsis thaliana
sequence At5g21150 zwille/pinhead-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 489
Score = 122 bits (261), Expect = 3e-027
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +2 / +2
Query: 473 VIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLH 652
++ + +H F P NV PGT+VDS++CHP+NFDF++C AG IGT+RPTHYHVL
Sbjct: 113 IVAQKNHHTKLFPGGGGPGNVQPGTIVDSQICHPRNFDFFLCPQAGPIGTSRPTHYHVLL 292
Query: 653 DEIGFSADEMQEFVHSLSYVY 715
DE FS D++Q VH+LSYVY
Sbjct: 293 DENDFSVDDLQILVHALSYVY 355
Score = 80.3 bits (169), Expect(2) = 2e-018
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +2 / +2
Query: 365 RDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
RDGVSESQF QV+N+EL I +AC ++ + PK T+IVAQKNHHTK F
Sbjct: 2 RDGVSESQFDQVLNVELQAIYKACNHIEAGYKPKITMIVAQKNHHTKLF 148
Score = 75.8 bits (159), Expect(2) = 2e-018
Identities = 39/64 (60%), Positives = 39/64 (60%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D T C SS K SS T**WVG VPI PA H KSKFLGWQ ST VPG
Sbjct: 354 YT*DKAWTRICRSSTLKSFSSSNT**WVGRDVPIGPA*GHKKKSKFLGWQIWESTIVPGC 175
Query: 534 TLSG 523
TL G
Sbjct: 174 TLPG 163
Score = 36.8 bits (74), Expect(2) = 2e-018
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
FF ATI V LG +S LHA I +S TW N SLTPSL
Sbjct: 129 FFCATIIVILGL*PASM*LHALYIACNSTFRTWSNCDSLTPSL 1
Score = 32.2 bits (64), Expect(2) = 2e-018
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3 / +3
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
I +FAIL +CV L E G P IM+ R + CR L + Y C
Sbjct: 195 IPRFAILEILIFSCVLKLAQ*EHHGLPIIMYYWMRMTLVWMTCRFLSMLYPMC 353
Score = 27.6 bits (54), Expect(2) = 0.23
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1 / -3
Query: 439 LTCLDDLIQLNVDDLGKLTFTDSI 368
+ CL + N+ DL KL FTDSI
Sbjct: 76 IACLVYSL*FNIQDLVKLRFTDSI 5
Score = 27.6 bits (54), Expect(2) = 0.23
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3 / -2
Query: 713 TRKIANEQTPASRLQRNLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGK 564
T +I + Q A + S HD+G A++F Q T ++++ *DGK
Sbjct: 353 THRIKHGQESAGHPH*SHSHPVIHDNG*AVMFLLGQLEDTRKNQNF*DGK 204
>gb|DR012422.1|DR012422 HEAT1_12_E12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_12_E12_A029 5', mRNA sequence
Length = 480
Score = 67.5 bits (141), Expect(4) = 5e-027
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 631
T N+LPGTVVDS +C PK FDFY+C+HAG+ GT++P
Sbjct: 317 TLKNGNLLPGTVVDSVICQPKIFDFYLCSHAGIKGTSKP 433
Score = 46.9 bits (96), Expect = 2e-004
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = -2 / -1
Query: 633 VGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
+GL+VP IPA *KS LGW STTVPGR
Sbjct: 435 LGLLVPFIPAWLQR*KSNILGWHMTESTTVPGR 337
Score = 43.7 bits (89), Expect(4) = 5e-027
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2 / +2
Query: 290 GLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFL 445
G I + L+ + KPE I+ +RDGVS+ QF V+N EL + +A + L
Sbjct: 14 GGIFKELLSSFQERCNTKPERILYYRDGVSDGQFEMVLNNELGALKKAIEAL 169
Score = 35.9 bits (72), Expect(4) = 5e-027
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 458 SPKFTVIVAQKNHHTKFF 511
SPK T IV QK HHT+FF
Sbjct: 239 SPKVTFIVVQKRHHTRFF 292
Score = 29.0 bits (57), Expect(4) = 5e-027
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 629 PTHYHVLHDEIGFS 670
PTHY+VL DE GF+
Sbjct: 432 PTHYNVLQDENGFT 473
>gb|CO157756.1|CO157756 FLD1_1_H03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_1_H03_A029 5', mRNA sequence
Length = 441
Score = 119 bits (254), Expect = 2e-026
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +2 / +2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
++ +N+H NV PGT+VD+++CHP+NFDFY+C AG IGT+RPTHYHVL D
Sbjct: 74 LIVAQNNHHTKLFPTGQGNVQPGTIVDAQICHPRNFDFYLCPQAGPIGTSRPTHYHVLLD 253
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F+ D++Q VH+LSYVY
Sbjct: 254 ENSFTVDDLQILVHALSYVY 313
Score = 54.2 bits (112), Expect(2) = 4e-011
Identities = 35/62 (56%), Positives = 36/62 (58%)
Frame = -2 / -1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D+ T SS K SS T * VG VPI PA H *KSKFLG Q ST VPG
Sbjct: 312 YT*DNAWTKI*RSSTVKLFSSSNTW**VGREVPIGPA*GHK*KSKFLG*QI*ASTIVPGC 133
Query: 534 TL 529
TL
Sbjct: 132 TL 127
Score = 53.3 bits (110), Expect = 2e-006
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2 / +2
Query: 401 INIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQT 517
+N+EL I++AC + + + PK T+IVAQ NHHTK F T
Sbjct: 2 LNVELHAILKACNDI*DGYRPKVTLIVAQNNHHTKLFPT 118
Score = 33.1 bits (66), Expect(2) = 4e-011
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -1 / -3
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNV 404
++L V+++L NN G ++ +TCL+ +QLN+
Sbjct: 112 EQLRVMIILRNNQCNFGPITILYVITCLEYSVQLNI 5
>gb|AW784002.1|AW784002 NXNV_096_G04_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_096_G04 5' similar to Arabidopsis thaliana
sequence At5g21150 zwille/pinhead-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 312
Score = 118 bits (253), Expect = 3e-026
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +2 / +1
Query: 524 PDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSL 703
P NV PGT+VDS++CHP+NFDF++C AG IGT+RPTHYHVL DE FS D++Q VH+L
Sbjct: 22 PGNVQPGTIVDSQICHPRNFDFFLCPQAGPIGTSRPTHYHVLLDENDFSVDDLQILVHAL 201
Query: 704 SYVY 715
SYVY
Sbjct: 202 SYVY 213
Score = 75.8 bits (159), Expect = 3e-013
Identities = 39/64 (60%), Positives = 39/64 (60%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D T C SS K SS T**WVG VPI PA H KSKFLGWQ ST VPG
Sbjct: 212 YT*DKAWTRICRSSTLKSFSSSNT**WVGRDVPIGPA*GHKKKSKFLGWQIWESTIVPGC 33
Query: 534 TLSG 523
TL G
Sbjct: 32 TLPG 21
Score = 32.2 bits (64), Expect = 4.0
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3 / +2
Query: 555 IVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSLFIRYLTC 713
I +FAIL +CV L E G P IM+ R + CR L + Y C
Sbjct: 53 IPRFAILEILIFSCVLKLAQ*EHHGLPIIMYYWMRMTLVWMTCRFLSMLYPMC 211
>gb|BX679820.1|BX679820 BX679820 RS Pinus pinaster cDNA clone RS34D06, mRNA sequence
Length = 646
Score = 74.4 bits (156), Expect(3) = 6e-026
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +2 / +3
Query: 539 PGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
PG K HP DF +C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 330 PGMEWIPKFGHPTELDFNLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTY 506
Score = 47.8 bits (98), Expect = 8e-005
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLS 526
C SA SS T**W GL+VP IPA KS +GW L ++PG+ +S
Sbjct: 475 CNPSAVNLFSSQXT**WAGLLVPWIPAWLQRLKSNSVGWPNLGIHSIPGQKVS 317
Score = 43.7 bits (89), Expect(3) = 6e-026
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 341 KPEHIIIFRDGVSESQFTQVINIELD 418
KPE II +RDGVSE QF QV+ ELD
Sbjct: 106 KPERIIFYRDGVSEGQFYQVLLYELD 183
Score = 37.3 bits (75), Expect(3) = 6e-026
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
I +AC L+ + P T +V QK HHT+ F D
Sbjct: 188 IRKACASLEPNYQPPVTFVVVQKRHHTRIFGNKHQD 295
>gb|DR050119.1|DR050119 RTBOR1_21_H11.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_21_H11_A029 3', mRNA sequence
Length = 848
Score = 116 bits (248), Expect = 2e-025
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = +2 / +2
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
++ + +H NV PGT+VD+++CHP+NFDFY+C AG IGT+RPTHYHVL D
Sbjct: 59 LIVAQKNHHTKLFPTGQGNVQPGTIVDAQICHPRNFDFYLCPQAGPIGTSRPTHYHVLLD 238
Query: 656 EIGFSADEMQEFVHSLSYVY 715
E F+ D++Q VH+LSYVY
Sbjct: 239 ENSFTVDDLQILVHALSYVY 298
Score = 54.2 bits (112), Expect(2) = 1e-008
Identities = 35/62 (56%), Positives = 36/62 (58%)
Frame = -2 / -3
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D+ T SS K SS T * VG VPI PA H *KSKFLG Q ST VPG
Sbjct: 297 YT*DNAWTKI*RSSTVKLFSSSNTW**VGREVPIGPA*GHK*KSKFLG*QI*ASTIVPGC 118
Query: 534 TL 529
TL
Sbjct: 117 TL 112
Score = 50.1 bits (103), Expect = 2e-005
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2 / +2
Query: 422 IIEACKFLDEKWSPKFTVIVAQKNHHTKFFQT 517
I++AC +++ + PK T+IVAQKNHHTK F T
Sbjct: 8 ILKACNDIEDGYRPKVTLIVAQKNHHTKLFPT 103
Score = 24.9 bits (48), Expect(2) = 1e-008
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 492 FF*ATITVNLGDHFSSRNLHASMI 421
FF ATI V LG SS +LHA I
Sbjct: 78 FFCATINVTLGL*PSSMSLHALSI 7
>gb|CX713355.1|CX713355 RTPQ1_8_D01.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_8_D01_A032 5', mRNA sequence
Length = 793
Score = 104 bits (221), Expect(2) = 3e-025
Identities = 35/63 (55%), Positives = 51/63 (80%)
Frame = +2 / -3
Query: 527 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLS 706
DN+ PGTVVD+ + HP+ FDFY+C+H+G+ GT+RPTHYHVL DE F +DE+Q+ +++L
Sbjct: 566 DNIPPGTVVDTLITHPREFDFYLCSHSGIKGTSRPTHYHVLWDENNFLSDELQQLINNLC 387
Query: 707 YVY 715
Y +
Sbjct: 386 YTF 378
Score = 60.2 bits (125), Expect = 2e-008
Identities = 30/53 (56%), Positives = 34/53 (64%)
Frame = -2 / +1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLS 526
C SS K SS T**WVGL+VP++P H *KS LG +STTVPG LS
Sbjct: 409 CSSSDRKLFSSHNT**WVGLLVPLMPEWLHK*KSNSLGCVIRVSTTVPGGILS 567
Score = 40.5 bits (82), Expect = 0.013
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = -1 / +3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIV 527
++KLL L+ + + Q+MI+G C+ M V+V+ M + +IH+SS +NIV
Sbjct: 396 VDKLLQLIR*KIIFIPQHMIMGWSACAFDA*MAAQVKVKFSWMCD*SIHYSSWRNIV 566
Score = 35.0 bits (70), Expect = 0.59
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3 / -1
Query: 522 HQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMFCTTR*VSLQTRCRSL 692
H+T+F EL WI+ I T TC + Q P IM C + + C SL
Sbjct: 571 HKTIFLQEL*WIL*SHIQENLTFTCAAIQASKAQADQPIIMCCGMKIIFYLMSCSSL 401
Score = 30.9 bits (61), Expect(2) = 3e-025
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2 / -3
Query: 449 EKWSPKFTVIVAQKNHHTKFFQT 517
E ++P T V QK HHT+ F +
Sbjct: 749 ENYNPTITFAVVQKRHHTRLFHS 681
>gb|DR695245.1|DR695245 EST1085338 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEM52 3' end, mRNA sequence
Length = 788
Score = 79.9 bits (168), Expect(2) = 3e-025
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPG 148
YL N+ +KINAK+GGLNS+L VE + IP +S PTII+GMDVSHG PG
Sbjct: 550 YLTNVALKINAKVGGLNSVLSVEFAHRIPKISMKPTIIIGMDVSHGSPG 696
Score = 58.8 bits (122), Expect(2) = 4e-013
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
+CPG PCETSIP ++VG + GI ST E RPP+FA IF + RY
Sbjct: 701 ACPGEPCETSIPIIIVGFIEILGILCANSTDKTELRPPTFAFIFKATFVRY 549
Score = 55.1 bits (114), Expect(2) = 3e-025
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2 / +1
Query: 152 DRPSVAAVVSSRQWPLISRYRASVHTQS 235
D PS++AVVSSR+WP ISRYRASV TQS
Sbjct: 703 DSPSISAVVSSREWPSISRYRASVRTQS 786
Score = 35.4 bits (71), Expect(2) = 4e-013
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 234 DWVCTDALYLEIRGH*RELTTAATEGLS 151
D V T+ALYLEI GH + TTA EG S
Sbjct: 785 D*VLTEALYLEIEGHSLDETTAEIEGES 702
Score = 34.5 bits (69), Expect = 0.81
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 151 LSWMTM*NIHT*DDGGYLRHMWY*RRCFNLQQRVQTTKLCIDLHQQI 11
+SW TM*NIH ++ + ++ Y R F+ Q RV+ T L I I
Sbjct: 699 MSWRTM*NIHPNNNCWFH*NLRYPMRKFHRQNRVEATNLRIYFQSHI 559
>gb|BX681875.1|BX681875 BX681875 RS Pinus pinaster cDNA clone RS66B04, mRNA sequence
Length = 557
Score = 98.2 bits (208), Expect(2) = 6e-025
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2 / +1
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+LPGTVVDS +C PK FDFY+C+HAG+ GT++P HY+VL DE GF+ +++Q
Sbjct: 157 TLKNGNLLPGTVVDSVICQPKIFDFYLCSHAGIKGTSKPAHYNVLQDENGFTPNDIQRLT 336
Query: 695 HSLSYVY 715
+ L + Y
Sbjct: 337 NDLCFTY 357
Score = 55.6 bits (115), Expect = 4e-007
Identities = 29/52 (55%), Positives = 30/52 (57%)
Frame = -2 / -1
Query: 690 NSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
N IS KP SS T * GL+VP IPA *KS LGW STTVPGR
Sbjct: 332 NR*ISFGVKPFSSWSTL**AGLLVPFIPAWLQR*KSNILGWHMTESTTVPGR 177
Score = 35.9 bits (72), Expect(2) = 6e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 458 SPKFTVIVAQKNHHTKFF 511
SPK T IV QK HHT+FF
Sbjct: 79 SPKVTFIVVQKRHHTRFF 132
>gb|DR020687.1|DR020687 STRS1_38_D07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_38_D07_A034 5', mRNA sequence
Length = 533
Score = 98.2 bits (208), Expect(2) = 6e-025
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2 / +3
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+LPGTVVDS +C PK FDFY+C+HAG+ GT++P HY+VL DE GF+ +++Q
Sbjct: 186 TLKNGNLLPGTVVDSVICQPKIFDFYLCSHAGIKGTSKPAHYNVLQDENGFTPNDIQRLT 365
Query: 695 HSLSYVY 715
+ L + Y
Sbjct: 366 NDLCFTY 386
Score = 55.6 bits (115), Expect = 4e-007
Identities = 29/52 (55%), Positives = 30/52 (57%)
Frame = -2 / -2
Query: 690 NSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
N IS KP SS T * GL+VP IPA *KS LGW STTVPGR
Sbjct: 361 NR*ISFGVKPFSSWSTL**AGLLVPFIPAWLQR*KSNILGWHMTESTTVPGR 206
Score = 35.9 bits (72), Expect(2) = 6e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 458 SPKFTVIVAQKNHHTKFF 511
SPK T IV QK HHT+FF
Sbjct: 108 SPKVTFIVVQKRHHTRFF 161
>gb|DR100644.1|DR100644 STRR1_66_D11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_66_D11_A033 3', mRNA sequence
Length = 839
Score = 113 bits (241), Expect = 2e-024
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +2 / -1
Query: 476 IVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHD 655
++ + +H NV PGT+VD+++CHP+NFDFY+C AG IGT+RPTHYHVL D
Sbjct: 755 LIVAQKNHHTKLFPTGQGNVQPGTIVDAQICHPRNFDFYLCPQAGPIGTSRPTHYHVLLD 576
Query: 656 EIGFSADEMQEFVHSLSYV 712
E F+ D++Q VH+LSYV
Sbjct: 575 ENSFTVDDLQILVHALSYV 519
Score = 65.2 bits (136), Expect = 5e-010
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +2 / -1
Query: 389 FTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQT 517
F QV+N+EL I++AC +++ + PK T+IVAQKNHHTK F T
Sbjct: 839 FDQVLNVELQAILKACNDIEDGYRPKVTLIVAQKNHHTKLFPT 711
Score = 54.2 bits (112), Expect(2) = 7e-013
Identities = 35/62 (56%), Positives = 36/62 (58%)
Frame = -2 / +1
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
YT*D+ T SS K SS T * VG VPI PA H *KSKFLG Q ST VPG
Sbjct: 517 YT*DNAWTKI*RSSTVKLFSSSNTW**VGREVPIGPA*GHK*KSKFLG*QI*ASTIVPGC 696
Query: 534 TL 529
TL
Sbjct: 697 TL 702
Score = 39.1 bits (79), Expect(2) = 7e-013
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -1 / +3
Query: 511 KELGVVVLLSNNHSELG*PLLIQKLTCLDDLIQLNVDDLGK 389
++L V++LL NN G ++ +TCL+ +QLN+ DL K
Sbjct: 717 EQLRVMILLRNNQCNFGPITILYVITCLEYSLQLNIQDLVK 839
Score = 31.3 bits (62), Expect = 7.5
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -2 / +1
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTW 394
FF ATI V LG SS +LHA I +S TW
Sbjct: 736 FFCATINVTLGL*PSSMSLHALSIACNSTFKTW 834
>gb|CO363849.1|CO363849 RTK1_12_E06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_E06_A029 3', mRNA sequence
Length = 900
Score = 112 bits (239), Expect = 3e-024
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 156 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 335
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 336 ADGLQSLTNNLCYTY 380
Score = 66.1 bits (138), Expect(2) = 3e-014
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +2 / +3
Query: 362 FRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
+RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 3 YRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 170
Score = 61.1 bits (127), Expect(2) = 1e-013
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 349 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 203
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 350 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 207
Score = 35.0 bits (70), Expect(2) = 1e-013
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = -2 / -3
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
K+LVW F* T V G F SR+ A I S+S T N SLTPSL
Sbjct: 151 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL 5
Score = 31.8 bits (63), Expect(2) = 3e-014
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 209 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 313
>gb|CO365399.1|CO365399 RTK1_25_B06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_25_B06_A029 5', mRNA sequence
Length = 845
Score = 112 bits (239), Expect = 3e-024
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 257 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 436
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 437 ADGLQSLTNNLCYTY 481
Score = 77.6 bits (163), Expect(2) = 1e-017
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 341 KPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTA 520
KPE II +RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 83 KPERIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANN 262
Query: 521 SPD 529
D
Sbjct: 263 HQD 271
Score = 61.1 bits (127), Expect(2) = 2e-014
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 450 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 304
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 451 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 308
Score = 37.3 bits (75), Expect(2) = 2e-014
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -3
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 252 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 85
Score = 31.8 bits (63), Expect(2) = 1e-017
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 310 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 414
>gb|CO365443.1|CO365443 RTK1_17_C10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_17_C10_A029 3', mRNA sequence
Length = 871
Score = 112 bits (239), Expect = 3e-024
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 111 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 290
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 291 ADGLQSLTNNLCYTY 335
Score = 61.1 bits (127), Expect = 8e-009
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 304 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 158
Score = 43.7 bits (89), Expect(2) = 1e-007
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2 / +3
Query: 410 ELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
ELD I +AC L+ + P T +V QK HHT+ F D
Sbjct: 6 ELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQD 125
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 305 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 162
Score = 31.8 bits (63), Expect(2) = 1e-007
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 164 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 268
>gb|CO369002.1|CO369002 RTK1_44_F12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_44_F12_A029 3', mRNA sequence
Length = 823
Score = 112 bits (239), Expect = 3e-024
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 68 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 247
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 248 ADGLQSLTNNLCYTY 292
Score = 61.1 bits (127), Expect = 8e-009
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 261 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 115
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 262 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 119
Score = 31.8 bits (63), Expect(2) = 0.002
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 121 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 225
Score = 29.5 bits (58), Expect(2) = 0.002
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2 / +2
Query: 455 WSPKFTVIVAQKNHHTKFFQTASPD 529
+ P T +V QK HHT+ F D
Sbjct: 8 YQPPVTFVVVQKRHHTRLFANNHQD 82
>gb|DR017548.1|DR017548 STRS1_17_B02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_B02_A034 3', mRNA sequence
Length = 759
Score = 112 bits (239), Expect = 3e-024
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 15 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 194
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 195 ADGLQSLTNNLCYTY 239
Score = 61.1 bits (127), Expect = 8e-009
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 208 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 62
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 209 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 66
Score = 31.8 bits (63), Expect = 5.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 68 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 172
>gb|DR017625.1|DR017625 STRS1_17_B02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_B02_A034 5', mRNA sequence
Length = 626
Score = 112 bits (239), Expect = 3e-024
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2 / +2
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 200 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 379
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 380 ADGLQSLTNNLCYTY 424
Score = 77.6 bits (163), Expect(2) = 1e-017
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +2 / +2
Query: 341 KPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTA 520
KPE II +RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F
Sbjct: 26 KPERIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANN 205
Query: 521 SPD 529
D
Sbjct: 206 HQD 214
Score = 61.1 bits (127), Expect(2) = 2e-014
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 393 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 247
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 394 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 251
Score = 37.3 bits (75), Expect(2) = 2e-014
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -2 / -3
Query: 510 KNLVWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
K+LVW F* T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 195 KSLVW*RF*TTTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 28
Score = 31.8 bits (63), Expect(2) = 1e-017
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 253 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 357
>gb|CO165691.1|CO165691 FLD1_56_G11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_G11_A029 3', mRNA sequence
Length = 818
Score = 98.2 bits (208), Expect(2) = 4e-024
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2 / +1
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+LPGTVVDS +C PK FDFY+C+HAG+ GT++P HY+VL DE GF+ +++Q
Sbjct: 103 TLKNGNLLPGTVVDSVICQPKIFDFYLCSHAGIKGTSKPAHYNVLQDENGFTPNDIQRLT 282
Query: 695 HSLSYVY 715
+ L + Y
Sbjct: 283 NDLCFTY 303
Score = 55.6 bits (115), Expect = 4e-007
Identities = 29/52 (55%), Positives = 30/52 (57%)
Frame = -2 / -1
Query: 690 NSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
N IS KP SS T * GL+VP IPA *KS LGW STTVPGR
Sbjct: 278 NR*ISFGVKPFSSWSTL**AGLLVPFIPAWLQR*KSNILGWHMTESTTVPGR 123
Score = 33.1 bits (66), Expect(2) = 4e-024
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2 / +1
Query: 458 SPKFTVIVAQKNHHTKFF 511
SPK T IV Q HHT+FF
Sbjct: 25 SPKVTFIVVQXRHHTRFF 78
>gb|CO365327.1|CO365327 RTK1_25_B06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_25_B06_A029 3', mRNA sequence
Length = 755
Score = 110 bits (235), Expect = 1e-023
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 6 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 185
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++ Y Y
Sbjct: 186 ADGLQSLTNNFCYTY 230
Score = 61.6 bits (128), Expect = 6e-009
Identities = 32/59 (54%), Positives = 34/59 (57%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
Y * C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 229 YV*QKLLVKDCNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 53
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 200 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 57
Score = 31.8 bits (63), Expect = 5.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +2
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 59 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 163
>gb|DT638906.1|DT638906 EST1153837 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHK80 3' end, mRNA sequence
Length = 819
Score = 69.8 bits (146), Expect(2) = 1e-023
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 321 YLANVALKINVKVGGRNTVLVDALSRRIPLVSDKPTIIFGADVTHPHPGEDSSPSIAAVV 500
Query: 182 SRQ 190
+ Q
Sbjct: 501 ASQ 509
Score = 60.2 bits (125), Expect(2) = 1e-023
Identities = 31/89 (34%), Positives = 44/89 (49%)
Frame = +2 / +3
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 549 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 728
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIV 481
QV+ ELD I +AC L+ + P T +V
Sbjct: 729 QVLLYELDAIRKACASLEPNYQPPVTFVV 815
Score = 43.7 bits (89), Expect = 0.001
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 480 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 590
Score = 42.3 bits (86), Expect(2) = 8e-005
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / -3
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VG T GI D+++ F PP+F LI + +RY
Sbjct: 472 SSPGCGWVTSAPKIIVGLSLTKGILLDSASTKTVFLPPTFTLILRATFARY 320
Score = 25.8 bits (50), Expect(2) = 8e-005
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = -2 / -3
Query: 480 TITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
T V G F SR+ A I S+S T N SLTPSL I+ SG
Sbjct: 814 TTKVTGG**FGSRDAQAFRIASNSYNRT**NWPSLTPSL*NIIRSG 677
>gb|AI725280.1|AI725280 1146 PtIFG2 Pinus taeda cDNA clone 9201r, mRNA sequence
Length = 580
Score = 110 bits (234), Expect = 1e-023
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +2 / +1
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFS 670
N+H T N+LPGTV DSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+
Sbjct: 73 NNHQDRNATDRSGNILPGTVXDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 252
Query: 671 ADEMQEFVHSLSYVY 715
AD +Q ++L Y Y
Sbjct: 253 ADGLQSLTNNLCYTY 297
Score = 58.8 bits (122), Expect = 4e-008
Identities = 29/49 (59%), Positives = 31/49 (63%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L S TVPG
Sbjct: 266 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESXTVPG 120
Score = 36.8 bits (74), Expect = 0.17
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF I +S+
Sbjct: 267 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIXYSA 124
Score = 31.8 bits (63), Expect(2) = 5e-004
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / +1
Query: 443 LDEKWSPKFTVIVAQKNHHTKFFQTASPD 529
L+ + P T +V QK HHT+ F D
Sbjct: 1 LEPNYQPPVTFVVVQKRHHTRLFANNHQD 87
Score = 31.3 bits (62), Expect(2) = 5e-004
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 126 HCXGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 230
>gb|BG040229.1|BG040229 NXSI_110_A07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_110_A07 5' similar to Arabidopsis thaliana
sequence At1g48410 Argonaute protein AGO1 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 578
Score = 109 bits (233), Expect = 2e-023
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 74 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 253
Query: 710 VY 715
Y
Sbjct: 254 TY 259
Score = 61.1 bits (127), Expect = 8e-009
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 228 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 82
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -2
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 229 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 86
Score = 33.6 bits (67), Expect = 1.5
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1 / +1
Query: 523 TRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
TR+ + +C G +LPS + LL + CW N A PLSCS
Sbjct: 67 TRKHIARHCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 192
Score = 32.7 bits (65), Expect = 2.9
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3 / +3
Query: 522 HQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGPPTIMF 647
H+ + L WI KFAI + T T ML E G P IMF
Sbjct: 66 HEETYCQAL*WIPKFAIQQNLTFTSAAMLVFRELVGLPIIMF 191
>gb|CF389519.1|CF389519 RTDR2_8_B11.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_B11_A021 3', mRNA
sequence
Length = 645
Score = 109 bits (233), Expect = 2e-023
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 23 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 202
Query: 710 VY 715
Y
Sbjct: 203 TY 208
Score = 61.1 bits (127), Expect = 8e-009
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 177 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 31
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 178 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 35
Score = 31.8 bits (63), Expect = 5.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +1
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 37 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 141
>gb|DR091080.1|DR091080 RTAL1_19_F09.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_19_F09_A029 3', mRNA sequence
Length = 741
Score = 109 bits (233), Expect = 2e-023
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y
Sbjct: 31 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 210
Query: 710 VY 715
Y
Sbjct: 211 TY 216
Score = 61.1 bits (127), Expect = 8e-009
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPG 538
C SA SS RT**W GL+VP IPA *KS +GWQ L STTVPG
Sbjct: 185 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KSNSVGWQILESTTVPG 39
Score = 40.9 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1 / -1
Query: 685 LHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 542
L + E + +NMI+G P S + SM V+V+ MANF IH+S+
Sbjct: 186 LQSISCEFVFIPKNMIMGRPTSSLNTSMAAEVKVKFCWMANFGIHYSA 43
Score = 31.8 bits (63), Expect = 5.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1 / +3
Query: 544 NCGG**SLPS*ELRLLHVCTCWDDWNNKAHPLSCS 648
+C G +LPS + LL + CW N A PLSCS
Sbjct: 45 HCSGFQNLPSNRI*LLPLQPCWYSGN**ACPLSCS 149
>gb|DR019406.1|DR019406 STRS1_29_F12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_29_F12_A034 5', mRNA sequence
Length = 733
Score = 58.8 bits (122), Expect(3) = 2e-023
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +2 / +3
Query: 302 ESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIV 481
+ L+D Y + K+ P+ I+ FRDGVSESQF V+N EL+ + EA P ++
Sbjct: 522 KELLDDYFKANKKLPDRILFFRDGVSESQFDMVLNSELEALREAVAHFKNYNPPVSFIVA 701
Query: 482 AQKNHHTKF 508
+++H F
Sbjct: 702 QKRHHTRLF 728
Score = 46.4 bits (95), Expect(3) = 2e-023
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
YL NL +KINAK+GG N+ L S +P + +G DV+H G A V
Sbjct: 246 YLANLALKINAKVGGSNAALLHSLSRQLPRFGSDHVMYIGADVNHPGSGDSTSPSIAAV 422
Score = 41.4 bits (84), Expect(3) = 2e-023
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PS+AAVV S WP +RY A V QS R+E + L
Sbjct: 405 PSIAAVVGSINWPWCNRYNARVSYQSHRVEHIQQL 509
Score = 31.3 bits (62), Expect(2) = 0.012
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 432 ASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
AS+ S+S L T N*LSLTPSLK + SG
Sbjct: 652 ASLRASNSELRTISN*LSLTPSLKKSILSG 563
Score = 29.0 bits (57), Expect(2) = 0.012
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2 / -1
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS P M + G D S PP+ A IF +KL+RY
Sbjct: 373 TSAPMYMTWSLPNLGNWRDKL*RSAALLPPTLAFIFNAKLARY 245
>gb|DR059299.1|DR059299 RTNIT1_16_H03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_16_H03_A029 5', mRNA sequence
Length = 685
Score = 98.2 bits (208), Expect(2) = 2e-023
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2 / -3
Query: 515 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFV 694
T N+LPGTVVDS +C PK FDFY+C+HAG+ GT++P HY+VL DE GF+ +++Q
Sbjct: 611 TLKNGNLLPGTVVDSVICQPKIFDFYLCSHAGIKGTSKPAHYNVLQDENGFTPNDIQRLT 432
Query: 695 HSLSYVY 715
+ L + Y
Sbjct: 431 NDLCFTY 411
Score = 55.6 bits (115), Expect = 4e-007
Identities = 29/52 (55%), Positives = 30/52 (57%)
Frame = -2 / +1
Query: 690 NSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
N IS KP SS T * GL+VP IPA *KS LGW STTVPGR
Sbjct: 436 NR*ISFGVKPFSSWSTL**AGLLVPFIPAWLQR*KSNILGWHMTESTTVPGR 591
Score = 30.9 bits (61), Expect(2) = 2e-023
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 464 KFTVIVAQKNHHTKFF 511
K T IV QK HHT+FF
Sbjct: 683 KVTFIVVQKRHHTRFF 636
>gb|DT633135.1|DT633135 EST1148066 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFR67 3' end, mRNA sequence
Length = 841
Score = 58.3 bits (121), Expect(3) = 4e-023
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +2 / +2
Query: 302 ESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIV 481
+ L+D Y + K+ P+ I+ FRDGVSESQF V+N EL+ + EA P ++
Sbjct: 614 KELLDDYFKANKKLPDRILFFRDGVSESQFDMVLNQELEALREAVAHFKNYNPPVSFIVA 793
Query: 482 AQKNHHTKF 508
+++H F
Sbjct: 794 QKRHHTRLF 820
Score = 46.4 bits (95), Expect(3) = 4e-023
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +2
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
YL NL +KINAK+GG N+ L S +P + +G DV+H G A V
Sbjct: 338 YLANLALKINAKVGGSNAALLHSLSRQLPRFGSDHVMYIGADVNHPGSGDSTSPSIAAV 514
Score = 40.9 bits (83), Expect(3) = 4e-023
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PS+AAVV S WP +RY A V QS R+E + L
Sbjct: 497 PSIAAVVGSINWPWCNRYSARVSYQSHRVEHIQQL 601
Score = 31.8 bits (63), Expect(2) = 0.010
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 432 ASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
AS+ S+S L T N*LSLTPSLK + SG
Sbjct: 744 ASLRASNSWLRTISN*LSLTPSLKKSILSG 655
Score = 29.0 bits (57), Expect(2) = 0.010
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2 / -2
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS P M + G D S PP+ A IF +KL+RY
Sbjct: 465 TSAPMYMTWSLPNLGNWRDKL*RSAALLPPTLAFIFNAKLARY 337
>gb|CO368589.1|CO368589 RTK1_41_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_41_C07_A029 5', mRNA sequence
Length = 741
Score = 100 bits (213), Expect(2) = 9e-023
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = +2 / +2
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ + HP+ FDFY+C+H G++GT++PTHYHVL D+ FS+DE++
Sbjct: 68 QRTKSGNVPPGTVVDTVIVHPRQFDFYLCSHNGLLGTSKPTHYHVLWDDNRFSSDELETL 247
Query: 692 VHSLSYVY 715
+++L Y +
Sbjct: 248 INNLCYTF 271
Score = 47.3 bits (97), Expect = 1e-004
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -1 / -3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+N+ L+ E ++ +NM++ G + P M +E+++ M N +HHS+R+NI
Sbjct: 253 VNQGFQLIRTEAVIIPENMVMSGLASAQKPIMAAQIEIKLSWMNNDCVHHSARRNI 86
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 678 SSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
SS K +SS RT * VGL+VP P H *KS G +STTVPG TL
Sbjct: 234 SSELKRLSSQRTW**VGLLVPRSPLWLHR*KSNCRG*TMTVSTTVPGGTL 85
Score = 33.1 bits (66), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3 / -2
Query: 647 EHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHC 528
EH + WA + + T R+++ D + PPQ QEEHC
Sbjct: 203 EHGNEWAC*CPEAHYGCTDRNQTVVDEQ*LCPPQCQEEHC 84
Score = 26.3 bits (51), Expect(2) = 9e-023
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 476 IVAQKNHHTKFF 511
IVAQK HHT+ F
Sbjct: 17 IVAQKRHHTRLF 52
>gb|BF609771.1|BF609771 NXSI_050_C01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_050_C01 5' similar to Arabidopsis thaliana
sequence At1g48410 Argonaute protein AGO1 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 548
Score = 65.7 bits (137), Expect(2) = 1e-022
Identities = 32/99 (32%), Positives = 48/99 (48%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ + P+ D + L+ + ++ P +RDGVSE F
Sbjct: 223 AQAHRQEMIEDLFKVVKDPKRGDVVRSMIRDLLRSFYTATXXXPMXXXFYRDGVSEGXFY 402
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
QV+ EL+ I AC +D+ + P T IV QK HHT+ F
Sbjct: 403 QVLLDELEXIRRACMSIDKDYQPPVTFIVVQKRHHTRLF 519
Score = 61.1 bits (127), Expect(2) = 1e-022
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = +2 / +1
Query: 11 NLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVSSRQ 190
N+ +KIN K GG N++L I VS VPTII G DV+H HPG+D A V + Q
Sbjct: 4 NVALKINVKAGGRNTVLVDALRRRISLVSDVPTIIFGADVTHPHPGEDTSPSIAAVVASQ 183
Score = 46.4 bits (95), Expect = 2e-004
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R EM+ LFK
Sbjct: 154 PSIAAVVASQDWPEVTKYVGLVSAQAHRQEMIEDLFK 264
Score = 31.8 bits (63), Expect(2) = 0.10
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -2 / -1
Query: 177 TTAATEGLSCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIF 22
T A +S PG* TS P ++VGT T I ++ S F PP+ IF
Sbjct: 170 TAAMDGLVSSPG*G*VTSAPNIIVGTSLTRDILLLRASTSTVFLPPALTFIF 15
Score = 24.9 bits (48), Expect(2) = 0.10
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 489 F*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSL 364
F* TI V G S ++ A + S+S TW SLTPSL
Sbjct: 497 F*TTIKVTGG**SLSIDMQALRMXSNSSSRTW*XCPSLTPSL 372
>gb|DR685801.1|DR685801 EST1075878 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB807 3' end, mRNA sequence
Length = 743
Score = 54.7 bits (113), Expect(3) = 4e-022
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +2 / +3
Query: 302 ESLIDFYTSSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEA 433
+ L+D Y + K+ P+ I+ FRDGVSESQF V+N EL+ + EA
Sbjct: 606 KELLDDYFKANKKLPDRILFFRDGVSESQFDMVLNQELEALREA 737
Score = 46.4 bits (95), Expect(3) = 4e-022
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
YL NL +KINAK+GG N+ L S +P + +G DV+H G A V
Sbjct: 330 YLANLALKINAKVGGSNAALLHSLSRQLPRFGSDHVMYIGADVNHPGSGDSTSPSIAAV 506
Score = 40.9 bits (83), Expect(3) = 4e-022
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSL 262
PS+AAVV S WP +RY A V QS R+E + L
Sbjct: 489 PSIAAVVGSINWPWCNRYSARVSYQSHRVEHIQQL 593
Score = 31.8 bits (63), Expect(2) = 0.009
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 432 ASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
AS+ S+S L T N*LSLTPSLK + SG
Sbjct: 736 ASLRASNSWLRTISN*LSLTPSLKKSILSG 647
Score = 29.0 bits (57), Expect(2) = 0.009
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2 / -2
Query: 129 TSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
TS P M + G D S PP+ A IF +KL+RY
Sbjct: 457 TSAPMYMTWSLPNLGNWRDKL*RSAALLPPTLAFIFNAKLARY 329
>gb|DR019332.1|DR019332 STRS1_29_F12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_29_F12_A034 3', mRNA sequence
Length = 746
Score = 100 bits (213), Expect = 1e-020
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = +2 / +1
Query: 512 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEF 691
Q NV PGTVVD+ + HP+ FDFY+C+H G++GT++PTHYHVL D+ FS+DE++
Sbjct: 16 QRTKSGNVPPGTVVDTVIVHPRQFDFYLCSHNGLLGTSKPTHYHVLWDDNRFSSDELETL 195
Query: 692 VHSLSYVY 715
+++L Y +
Sbjct: 196 INNLCYTF 219
Score = 47.3 bits (97), Expect = 1e-004
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -1 / -3
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+N+ L+ E ++ +NM++ G + P M +E+++ M N +HHS+R+NI
Sbjct: 201 VNQGFQLIRTEAVIIPENMVMSGLASAQKPIMAAQIEIKLSWMNNDCVHHSARRNI 34
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 678 SSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
SS K +SS RT * VGL+VP P H *KS G +STTVPG TL
Sbjct: 182 SSELKRLSSQRTW**VGLLVPRSPLWLHR*KSNCRG*TMTVSTTVPGGTL 33
Score = 33.1 bits (66), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3 / -2
Query: 647 EHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHC 528
EH + WA + + T R+++ D + PPQ QEEHC
Sbjct: 151 EHGNEWAC*CPEAHYGCTDRNQTVVDEQ*LCPPQCQEEHC 32
>gb|CX651712.1|CX651712 COLD1_54_G01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_54_G01_A029 3', mRNA sequence
Length = 291
Score = 66.6 bits (139), Expect(2) = 1e-020
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +2 / -3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFKPRGTDDD 289
PS++AVV+SR+WPLISRYRASV TQS ++EM+ +L K T D
Sbjct: 277 PSISAVVASREWPLISRYRASVRTQSPKVEMIEALHKQSPTGKD 146
Score = 52.4 bits (108), Expect(2) = 1e-020
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2 / -3
Query: 335 KRKPEHIIIFRDGVSESQFTQVINIEL 415
+RKP+ +IIFRDGVSESQF QV+N+EL
Sbjct: 82 ERKPQQMIIFRDGVSESQFDQVLNVEL 2
Score = 48.7 bits (100), Expect(2) = 1e-010
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2 / +3
Query: 252 IISSLADWVCTDALYLEIRGH*RELTTAATEG 157
IIS+L D V T+ALYL+I+GH RE TTA EG
Sbjct: 183 IISTLGDCVLTEALYLDIKGHSREATTAEIEG 278
Score = 36.8 bits (74), Expect(2) = 1e-010
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 414 SSMLMTWVN*LSLTPSLKIIMCSGF 340
+S TW N SLTPSLK+I+C GF
Sbjct: 3 NSTFKTWSNCDSLTPSLKMIICCGF 77
Score = 36.3 bits (73), Expect = 0.23
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1 / +2
Query: 415 QLNVDDLGKLTFTDSIPENNYVFWFS 338
QLN+ DL KL FTDSI EN+++ S
Sbjct: 2 QLNIQDLVKLRFTDSISENDHLLRLS 79
>gb|CX651761.1|CX651761 COLD1_54_D03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_54_D03_A029 5', mRNA sequence
Length = 722
Score = 99.6 bits (211), Expect = 2e-020
Identities = 33/62 (53%), Positives = 50/62 (80%)
Frame = +2 / -2
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV PGTVVD+ + HP+ FDFY+C+H G++GT++PTHYHVL D+ FS+DE++ +++L Y
Sbjct: 718 NVPPGTVVDTVIVHPRQFDFYLCSHNGLLGTSKPTHYHVLWDDNRFSSDELETLINNLCY 539
Query: 710 VY 715
+
Sbjct: 538 TF 533
Score = 47.3 bits (97), Expect = 1e-004
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -1 / +2
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+N+ L+ E ++ +NM++ G + P M +E+++ M N +HHS+R+NI
Sbjct: 551 VNQGFQLIRTEAVIIPENMVMSGLASAQKPIMAAQIEIKLSWMNNDCVHHSARRNI 718
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/50 (54%), Positives = 30/50 (60%)
Frame = -2 / +3
Query: 678 SSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
SS K +SS RT * VGL+VP P H *KS G +STTVPG TL
Sbjct: 570 SSELKRLSSQRTW**VGLLVPRSPLWLHR*KSNCRG*TMTVSTTVPGGTL 719
Score = 33.1 bits (66), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3 / +1
Query: 647 EHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHC 528
EH + WA + + T R+++ D + PPQ QEEHC
Sbjct: 601 EHGNEWAC*CPEAHYGCTDRNQTVVDEQ*LCPPQCQEEHC 720
>gb|DR694995.1|DR694995 EST1085088 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEJ27 3' end, mRNA sequence
Length = 863
Score = 69.8 bits (146), Expect(2) = 4e-020
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVVS 181
YL N+ +KIN K+GG N++L S IP VS PTII G DV+H HPG+D A V
Sbjct: 313 YLANVALKINVKVGGRNTVLVDALSRRIPLVSDKPTIIFGADVTHPHPGEDSSPSIAAVV 492
Query: 182 SRQ 190
+ Q
Sbjct: 493 ASQ 501
Score = 48.3 bits (99), Expect(2) = 4e-020
Identities = 29/102 (28%), Positives = 49/102 (48%)
Frame = +2 / +1
Query: 215 ASVHTQSARLEMMSSLFKPRGTDDDGLIRESLIDFYTSSGKRKPEHIIIFRDGVSESQFT 394
A H Q ++ P G + + L+ + + KPE II +RDGVSE QF
Sbjct: 541 AQAHRQELIQDLYKVWQDPVRGSATGGMIKELLISFRRNTGHKPERIIFYRDGVSEGQFY 720
Query: 395 QVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTA 520
QV+ ELD I +A ++ + + + ++++H F T+
Sbjct: 721 QVLLYELDAIRKAVHL*NQIINLQLLLWCSKRHHTRLFATTS 846
Score = 43.7 bits (89), Expect(2) = 2e-004
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARLEMMSSLFK 268
PS+AAVV+S+ WP +++Y V Q+ R E++ L+K
Sbjct: 472 PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYK 582
Score = 42.3 bits (86), Expect = 0.004
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 153 SCPG*PCETSIPKMMVGTCDTCGIDEDASTCSNEFRPPSFALIFISKLSRY 1
S PG TS PK++VG T GI D+++ F PP+F LI + +RY
Sbjct: 464 SSPGCGWVTSAPKIIVGLSLTKGILLDSASTKTVFLPPTFTLILRATFARY 312
Score = 23.5 bits (45), Expect(2) = 2e-004
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2 / +1
Query: 488 KNHHTKFFQTASPDN 532
K HHT+ F T S N
Sbjct: 811 KRHHTRLFATTSDRN 855
>gb|BQ633982.1|BQ633982 NXRV063_D02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV063_D02 5' similar to Arabidopsis thaliana
sequence At1g69440 hypothetical protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 615
Score = 87.7 bits (185), Expect(2) = 9e-020
Identities = 30/62 (48%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
NV PGTVVD+ + P+ FD Y+C+H G++GT++ THYHVL D+ FS+DE++ +++L Y
Sbjct: 220 NVPPGTVVDTVIVRPRQFDGYLCSHNGLLGTSKRTHYHVLWDDNRFSSDELETLINNLCY 399
Query: 710 VY 715
+
Sbjct: 400 TF 405
Score = 39.1 bits (79), Expect = 0.034
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -2 / -2
Query: 678 SSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTL 529
SS K +SS RT * V L+VP P H * S G +STTVPG TL
Sbjct: 368 SSELKRLSSQRTW**VRLLVPRSPLWLHR*PSNCRGRTMTVSTTVPGGTL 219
Score = 39.1 bits (79), Expect = 0.034
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = -1 / -1
Query: 697 MNKLLHLVCRETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNI 530
+N+ L+ E ++ +NM++ + P M + +++ N +HHS+R+NI
Sbjct: 387 VNQGFQLIRTEAVIIPENMVMSALASAQKPIMAAQIAIKLSWTYNDCVHHSARRNI 220
Score = 29.0 bits (57), Expect(2) = 9e-020
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2 / +3
Query: 371 GVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHH 499
GVSESQF V+N EL + EA P ++ + H
Sbjct: 48 GVSESQFYMVLNQEL*ALREAVAHFKNXSXPVSFIVTHXETSH 176
>gb|CF663944.1|CF663944 RTCNT1_6_E05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_6_E05_A029 3', mRNA sequence
Length = 401
Score = 95.9 bits (203), Expect = 3e-019
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +2 / -3
Query: 335 KRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 511
+RKP+ +I+FRDGVSESQF QV+N+EL I +AC ++ + PK T+IVAQKNHHTK F
Sbjct: 261 ERKPQQMIVFRDGVSESQFDQVLNVELQAIYKACNHIEAGYKPKITMIVAQKNHHTKLF 85
Score = 55.1 bits (114), Expect(2) = 7e-010
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2 / -3
Query: 473 VIVAQKNHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFY 592
++ + +H F P NV PGT+VDS++CHP+NFDF+
Sbjct: 120 IVAQKNHHTKLFPGGGGPGNVQPGTIVDSQICHPRNFDFF 1
Score = 52.4 bits (108), Expect(2) = 7e-012
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -2 / +2
Query: 492 FF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSGFR 337
FF ATI V LG +S LHA I +S TW N SLTPSLK I+C GFR
Sbjct: 104 FFCATIIVILGL*PASM*LHALYIACNSTFRTWSNCDSLTPSLKTIICCGFR 259
Score = 37.7 bits (76), Expect(2) = 7e-012
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -2 / +2
Query: 588 KSKFLGWQTLLSTTVPGRTLSG 523
KSKFLGWQ ST VPG TL G
Sbjct: 5 KSKFLGWQIWESTIVPGCTLPG 70
Score = 37.3 bits (75), Expect = 0.12
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -1 / +1
Query: 439 LTCLDDLIQLNVDDLGKLTFTDSIPENNYVFWFS 338
+ CL + N+ DL KL FTDSI E+N++ FS
Sbjct: 157 IACLVYSL*FNIQDLVKLRFTDSISEDNHLLRFS 258
Score = 28.1 bits (55), Expect(2) = 7e-010
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3 / -1
Query: 336 SENQNT*LFSGMESVKVSLPRSSTLSWIRSSRH 434
+EN++ *L S MESV +L RS L++ +RH
Sbjct: 260 NENRSK*LSSEMESVNRNLTRS*MLNYKLYTRH 162
>gb|CO364433.1|CO364433 RTK1_15_E04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_E04_A029 5', mRNA sequence
Length = 643
Score = 94.1 bits (199), Expect = 1e-018
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +2 / -1
Query: 530 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSY 709
N+LPGTVVDS +C PK FDFY C+HAG+ GT++P HY+V DE GF +++Q + L +
Sbjct: 598 NLLPGTVVDSVICQPKIFDFYFCSHAGIKGTSKPAHYNVFQDENGFPPNDIQRLTNDLCF 419
Query: 710 VY 715
Y
Sbjct: 418 TY 413
Score = 56.1 bits (116), Expect = 3e-007
Identities = 29/52 (55%), Positives = 30/52 (57%)
Frame = -2 / +3
Query: 690 NSCISSAEKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGR 535
N IS KP SS T * GL+VP IPA *KS LGW STTVPGR
Sbjct: 438 NR*ISFGGKPFSSWNTL**AGLLVPFIPAWLQK*KSNILGWHMTESTTVPGR 593
>gb|BG317563.1|BG317563 NXPV_003_C07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_003_C07 5' similar to Arabidopsis
thaliana sequence At1g48410 Argonaute protein AGO1 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 332
Score = 73.0 bits (153), Expect = 2e-012
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2 / +3
Query: 581 FDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
FDFY+C+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 6 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTY 140
Score = 37.3 bits (75), Expect = 0.12
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -2 / -2
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPACAHM*KS 583
C SA SS RT**W GL+VP IPA *KS
Sbjct: 109 CNPSAVNLFSSQRT**WAGLLVP*IPAWLQR*KS 8
>gb|AW888102.1|AW888102 NXNV_129_B12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_129_B12 5' similar to Arabidopsis thaliana
sequence At1g48410 Argonaute protein AGO1 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 210
Score = 70.7 bits (148), Expect = 1e-011
Identities = 30/54 (55%), Positives = 33/54 (61%)
Frame = +2 / +3
Query: 341 KPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHT 502
KPE II FRDGVSE QF QV+ ELD I C L + P T +V QK HHT
Sbjct: 48 KPERIIFFRDGVSEGQFYQVLLYELDAIRXXCASLXPNYQPPVTFVVVQKRHHT 209
Score = 34.1 bits (68), Expect = 1.1
Identities = 24/53 (45%), Positives = 27/53 (50%)
Frame = -2 / -3
Query: 501 VWWFF*ATITVNLGDHFSSRNLHASMI*SSSMLMTWVN*LSLTPSLKIIMCSG 343
VW F* T V G F R+ I S+S T N SLTPSLK I+ SG
Sbjct: 208 VW*RF*TTTKVTGG**FGXRDAQXXRIASNSYNRT**NWPSLTPSLKNIIRSG 50
>gb|DR081033.1|DR081033 RTFEPL1_26_H08.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_26_H08_A029 5', mRNA sequence
Length = 113
Score = 69.3 bits (145), Expect = 3e-011
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +2 / +2
Query: 569 HPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSAD 676
HP+ FDFY+C+H G++GT++PTHYHVL D+ FS+D
Sbjct: 5 HPRQFDFYLCSHNGLLGTSKPTHYHVLWDDNRFSSD 112
>gb|CX713122.1|CX713122 RTPQ1_7_D07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_7_D07_A032 3', mRNA sequence
Length = 813
Score = 46.4 bits (95), Expect(2) = 4e-010
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
YL NL +KINAK+GG N+ L S +P + +G DV+H G A V
Sbjct: 549 YLANLALKINAKVGGSNAALLHSLSRQLPRFGSDHVMYIGADVNHPGSGDSTSPSIAAV 725
Score = 37.7 bits (76), Expect(2) = 4e-010
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQSARL 244
PS+AAVV S WP +RY A V QS R+
Sbjct: 708 PSIAAVVGSINWPWCNRYNARVSYQSHRV 794
>gb|CR392268.1|CR392268 CR392268 RN Pinus pinaster cDNA clone RN30B12, mRNA sequence
Length = 151
Score = 62.9 bits (131), Expect = 2e-009
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +2 / +3
Query: 491 NHHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAH 604
N+H T N+LPGTVVDSK+CHP FDFY+C+H
Sbjct: 36 NNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSH 149
Score = 31.3 bits (62), Expect = 7.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 591 *KSKFLGWQTLLSTTVPG 538
*KS +GWQ L STTVPG
Sbjct: 136 *KSNSVGWQILESTTVPG 83
>gb|CF478983.1|CF478983 RTWW3_21_F03.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_21_F03_A022 3', mRNA sequence
Length = 608
Score = 62.0 bits (129), Expect = 4e-009
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 614 IGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
IGT+RPTHYHVL DE FS D++Q VH+LSYVY
Sbjct: 3 IGTSRPTHYHVLLDENDFSVDDLQILVHALSYVY 104
Score = 38.2 bits (77), Expect = 0.064
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 714 YT*DSE*TNSCISSAEKPISSCRT**WVGLVVPI 613
YT*D T C SS K SS T**WVG VPI
Sbjct: 103 YT*DKAWTRICRSSTLKSFSSSNT**WVGRDVPI 2
>gb|CX713204.1|CX713204 RTPQ1_7_D07.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_7_D07_A032 5', mRNA sequence
Length = 768
Score = 46.4 bits (95), Expect(2) = 4e-009
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +1
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
YL NL +KINAK+GG N+ L S +P + +G DV+H G A V
Sbjct: 535 YLANLALKINAKVGGSNAALLHSLSRQLPRFGSDHVMYIGADVNHPGSGDSTSPSIAAV 711
Score = 34.1 bits (68), Expect(2) = 4e-009
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQ 232
PS+AAVV S WP +RY A V Q
Sbjct: 694 PSIAAVVGSINWPWCNRYNARVSYQ 768
>gb|BQ696016.1|BQ696016 NXPV_035_D12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_035_D12 5' similar to Arabidopsis
thaliana sequence At1g69440 hypothetical protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 506
Score = 46.0 bits (94), Expect(2) = 2e-008
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +3
Query: 2 YLLNLLMKINAKLGGLNSLLQVEASSSIPHVSQVPTIILGMDVSHGHPGQDRPSVAAVV 178
YL NL +KINAK+GG N+ L S +P + +G DV+H G A V
Sbjct: 231 YLANLALKINAKVGGSNAALLHSLSRQLPRFGSDHVMYIGADVNHPGXGDSTSPSIAAV 407
Score = 32.2 bits (64), Expect(2) = 2e-008
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 158 PSVAAVVSSRQWPLISRYRASVHTQ 232
PS+AAVV WP +RY A V Q
Sbjct: 390 PSIAAVVXXINWPWCNRYNARVSYQ 464
>gb|DR177283.1|DR177283 RTMNUT1_4_H01.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_4_H01_A029 3', mRNA sequence
Length = 637
Score = 56.5 bits (117), Expect = 2e-007
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2 / +3
Query: 599 AHAGMIGTTRPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
+HAG+ GT+RP HYHVL DE F+AD +Q ++L Y Y
Sbjct: 3 SHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTY 119
Score = 34.5 bits (69), Expect = 0.81
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -2 / -1
Query: 684 CISSAEKPISSCRT**WVGLVVPIIPA 604
C SA SS RT**W GL+VP IPA
Sbjct: 88 CNPSAVNLFSSQRT**WAGLLVP*IPA 8
>gb|CX651789.1|CX651789 COLD1_54_G01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_54_G01_A029 5', mRNA sequence
Length = 652
Score = 52.4 bits (108), Expect = 3e-006
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 626 RPTHYHVLHDEIGFSADEMQEFVHSLSYVY 715
RPTHYHVL DE F D++Q VH+LSYVY
Sbjct: 652 RPTHYHVLLDENSFIVDDLQILVHALSYVY 563
>gb|CV031738.1|CV031738 RTNACL1_3_H12.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_3_H12_A029 3', mRNA sequence
Length = 624
Score = 35.4 bits (71), Expect(2) = 5e-004
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3 / +3
Query: 563 LYYPPQFQEEHCLVMPSERTWCGGSF 486
L YPP EE C+ P +WC G F
Sbjct: 90 LLYPPHSSEEECVPPPESFSWCPGIF 167
Score = 29.5 bits (58), Expect(2) = 5e-004
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 399 SASSGVSCPS*PCPCSTP 452
>gb|CX652537.1|CX652537 COLD1_59_F02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_F02_A029 5', mRNA sequence
Length = 717
Score = 40.9 bits (83), Expect(2) = 8e-004
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2 / +3
Query: 326 SSGKRKPEHIIIFRDGVSESQFTQVINIELDQIIEACKFLDEKWS 460
S K+ P HI I+R GVSE +++QV +E +++ L K S
Sbjct: 228 SKSKQWPSHIFIYRSGVSEGEYSQVARVEKTALLKCFDGLASKHS 362
Score = 23.5 bits (45), Expect(2) = 8e-004
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2 / +3
Query: 110 IILGMDVSHGHPGQDRPS 163
+ +G+D+SH H G S
Sbjct: 21 LFIGLDLSHSHAGPSAQS 74
>gb|BQ696025.1|BQ696025 NXPV_035_E08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_035_E08 5' similar to Arabidopsis
thaliana sequence At3g50980 dehydrin-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 529
Score = 30.9 bits (61), Expect(2) = 0.009
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -2
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 378 PPHSSEEECVPPPESFSWCPGIF 310
Score = 29.5 bits (58), Expect(2) = 0.009
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 78 SASSGVSCPS*PCPCSTP 25
>gb|BQ696247.1|BQ696247 NXPV_037_A12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_037_A12 5', mRNA sequence
Length = 547
Score = 30.9 bits (61), Expect(2) = 0.009
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -3
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 377 PPHSSEEECVPPPESFSWCPGIF 309
Score = 29.5 bits (58), Expect(2) = 0.009
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 78 SASSGVSCPS*PCPCSTP 25
>gb|AY867567.1| Pinus taeda isolate FBRC1 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867568.1| Pinus taeda isolate FBRC2 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867569.1| Pinus taeda isolate FBRC3 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867570.1| Pinus taeda isolate FBRC4 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867571.1| Pinus taeda isolate FBRC5 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867572.1| Pinus taeda isolate FBRC6 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867573.1| Pinus taeda isolate FBRC7 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867574.1| Pinus taeda isolate FBRC8 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867575.1| Pinus taeda isolate FBRC9 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867576.1| Pinus taeda isolate FBRC10 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867577.1| Pinus taeda isolate FBRC11 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867578.1| Pinus taeda isolate FBRC12 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867579.1| Pinus taeda isolate FBRC13 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867581.1| Pinus taeda isolate FBRC15 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867582.1| Pinus taeda isolate FBRC16 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867583.1| Pinus taeda isolate FBRC17 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867584.1| Pinus taeda isolate FBRC18 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867585.1| Pinus taeda isolate FBRC19 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867586.1| Pinus taeda isolate FBRC20 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867587.1| Pinus taeda isolate FBRC21 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867588.1| Pinus taeda isolate FBRC22 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867589.1| Pinus taeda isolate FBRC23 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867590.1| Pinus taeda isolate FBRC24 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867591.1| Pinus taeda isolate FBRC25 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867593.1| Pinus taeda isolate FBRC27 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867595.1| Pinus taeda isolate FBRC29 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867596.1| Pinus taeda isolate FBRC30 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|AY867597.1| Pinus taeda isolate FBRC31 dehydrin 1 (dhn-1) gene, partial cds
Length = 643
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|CO199097.1|CO199097 GEO1_18_F12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_18_F12_A029 5', mRNA sequence
Length = 671
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -3
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 471 PPHSSEEECVPPPESFSWCPGIF 403
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 171 SASSGVSCPS*PCPCSTP 118
>gb|AY867594.1| Pinus taeda isolate FBRC28 dehydrin 1 (dhn-1) gene, partial cds
Length = 673
Score = 30.9 bits (61), Expect(2) = 0.011
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 514 PPHSSEEECVPPPESFSWCPGIF 446
Score = 29.5 bits (58), Expect(2) = 0.011
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
>gb|DR388209.1|DR388209 RTHG1_26_G02.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_26_G02_A029 5', mRNA sequence
Length = 853
Score = 30.9 bits (61), Expect(2) = 0.014
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3 / -3
Query: 554 PPQFQEEHCLVMPSERTWCGGSF 486
PP EE C+ P +WC G F
Sbjct: 593 PPHSSEEECVPPPESFSWCPGIF 525
Score = 29.5 bits (58), Expect(2) = 0.014
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 293 SASSGVSCPS*PCPCSTP 240
>gb|DR053121.1|DR053121 RTCA1_9_D06.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_9_D06_A029 3', mRNA sequence
Length = 621
Score = 37.7 bits (76), Expect = 0.088
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2 / +1
Query: 635 HYHVLHDEIGFSADEMQEFVHSLSYVY 715
HYHVL DE F+AD +Q ++L Y Y
Sbjct: 4 HYHVLWDENKFTADGLQSLTNNLCYTY 84
>gb|DR018895.1|DR018895 STRS1_26_B08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_26_B08_A034 5', mRNA sequence
Length = 110
Score = 36.8 bits (74), Expect = 0.17
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 641 HVLHDEIGFSADEMQEFVHSLSYVY 715
HVL DE F+ D++ VH+LSYVY
Sbjct: 3 HVLLDENSFTVDDLHILVHALSYVY 77
>gb|AY867580.1| Pinus taeda isolate FBRC14 dehydrin 1 (dhn-1) gene, partial cds
Length = 635
Score = 29.5 bits (58), Expect(2) = 0.40
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
Score = 25.4 bits (49), Expect(2) = 0.40
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -3 / -1
Query: 551 PQFQEEHCLVMPSERTWCGGSF 486
P E C+ P +WC G F
Sbjct: 506 PPHSSEECVPPPESFSWCPGIF 441
>gb|AY867592.1| Pinus taeda isolate FBRC26 dehydrin 1 (dhn-1) gene, partial cds
Length = 635
Score = 29.5 bits (58), Expect(2) = 0.40
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
Score = 25.4 bits (49), Expect(2) = 0.40
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -3 / -1
Query: 551 PQFQEEHCLVMPSERTWCGGSF 486
P E C+ P +WC G F
Sbjct: 506 PPHSSEECVPPPESFSWCPGIF 441
>gb|AY867598.1| Pinus taeda isolate FBRC32 dehydrin 1 (dhn-1) gene, partial cds
Length = 635
Score = 29.5 bits (58), Expect(2) = 0.40
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 101 SASSGVSCPS*PCPCSTP 48
Score = 25.4 bits (49), Expect(2) = 0.40
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -3 / -1
Query: 551 PQFQEEHCLVMPSERTWCGGSF 486
P E C+ P +WC G F
Sbjct: 506 PPHSSEECVPPPESFSWCPGIF 441
>gb|DR011117.1|DR011117 HEAT1_3_C07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_C07_A029 5', mRNA sequence
Length = 780
Score = 29.5 bits (58), Expect(2) = 0.48
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 223 SASSGVSCPS*PCPCSTP 170
Score = 25.4 bits (49), Expect(2) = 0.48
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -3 / -3
Query: 551 PQFQEEHCLVMPSERTWCGGSF 486
P E C+ P +WC G F
Sbjct: 520 PPHSSEECVPPPESFSWCPGIF 455
>gb|DT632773.1|DT632773 EST1147704 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFN59 3' end, mRNA sequence
Length = 836
Score = 29.5 bits (58), Expect(2) = 0.52
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 337 SASSGVSCPS*PCPCSTP 284
Score = 25.4 bits (49), Expect(2) = 0.52
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -3 / -2
Query: 551 PQFQEEHCLVMPSERTWCGGSF 486
P E C+ P +WC G F
Sbjct: 634 PPHSSEECVPPPESFSWCPGIF 569
>gb|DR685444.1|DR685444 EST1075521 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB389 3' end, mRNA sequence
Length = 866
Score = 29.5 bits (58), Expect(2) = 0.53
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 329 SASSGVSCPS*PCPCSTP 276
Score = 25.4 bits (49), Expect(2) = 0.53
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -3 / -1
Query: 551 PQFQEEHCLVMPSERTWCGGSF 486
P E C+ P +WC G F
Sbjct: 626 PPHSSEECVPPPESFSWCPGIF 561
>gb|DN613446.1|DN613446 EST966496 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABS39, mRNA sequence
Length = 296
Score = 28.1 bits (55), Expect(2) = 1.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2 / -1
Query: 638 YHVLHDEIGFSADEMQEFVHSLS 706
YH LH++ F + F+HS S
Sbjct: 89 YHYLHNQFSFYIHSLSSFLHSAS 21
Score = 23.1 bits (44), Expect(2) = 1.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1 / -2
Query: 328 LWKAKTRTHNYF 363
LW K R +NYF
Sbjct: 202 LWSRKNRNNNYF 167
>gb|DT628622.1|DT628622 EST1155192 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMD009 5' end, mRNA sequence
Length = 296
Score = 28.1 bits (55), Expect(2) = 1.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2 / +1
Query: 638 YHVLHDEIGFSADEMQEFVHSLS 706
YH LH++ F + F+HS S
Sbjct: 208 YHYLHNQFSFYIHSLSSFLHSAS 276
Score = 23.1 bits (44), Expect(2) = 1.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1 / +2
Query: 328 LWKAKTRTHNYF 363
LW K R +NYF
Sbjct: 95 LWSRKNRNNNYF 130
>gb|BE997181.1|BE997181 NXCI_107_C12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_107_C12 5', mRNA sequence
Length = 446
Score = 29.5 bits (58), Expect(2) = 1.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 171 AATEGLSCPG*PCETSIP 118
+A+ G+SCP *PC S P
Sbjct: 164 SASSGVSCPS*PCPCSTP 111
Score = 23.1 bits (44), Expect(2) = 1.3
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3 / -1
Query: 536 EHCLVMPSERTWCGGSF 486
E C+ P +WC G F
Sbjct: 446 EECVPPPESFSWCPGIF 396
>gb|CX715375.1|CX715375 RTPQ1_33_F04.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_33_F04_A032 5', mRNA sequence
Length = 600
Score = 33.6 bits (67), Expect = 1.5
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2 / -2
Query: 411 SMLMTWVN*LSLTPSLKIIMCSGFRFPE 328
S LM W +SLTPSLK +M S FP+
Sbjct: 428 SSLMVWSIGISLTPSLKCLMPSSVIFPQ 345
>gb|CF472766.1|CF472766 RTDS1_11_D02.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_D02_A015 5', mRNA sequence
Length = 770
Score = 25.4 bits (49), Expect(2) = 2.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 570 ILRTSTSTCVHMLG*LEQQG 629
ILR+ TC+H+LG* QG
Sbjct: 510 ILRS*GGTCLHLLG*RGLQG 451
Score = 24.9 bits (48), Expect(2) = 2.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2 / -1
Query: 401 INIELDQIIEACKFLDEKWSPKFTVIVAQKN 493
I ++++Q+ + LDE K T+IVAQ+N
Sbjct: 659 IILQIEQLEACEEILDEIVDLKRTMIVAQRN 567
>gb|CF472685.1|CF472685 RTDS1_11_D02.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_D02_A015 3', mRNA sequence
Length = 605
Score = 25.4 bits (49), Expect(2) = 2.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 570 ILRTSTSTCVHMLG*LEQQG 629
ILR+ TC+H+LG* QG
Sbjct: 228 ILRS*GGTCLHLLG*RGLQG 169
Score = 24.9 bits (48), Expect(2) = 2.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2 / -1
Query: 401 INIELDQIIEACKFLDEKWSPKFTVIVAQKN 493
I ++++Q+ + LDE K T+IVAQ+N
Sbjct: 377 IILQIEQLEACEEILDEIVDLKRTMIVAQRN 285
>gb|CV034287.1|CV034287 RTNACL1_39_H11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_39_H11_A029 5', mRNA sequence
Length = 709
Score = 29.5 bits (58), Expect(2) = 3.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 308 LIDFYTSSGKRKPEHIIIFRDG 373
L+ F S K++P+ ++IFRDG
Sbjct: 6 LLRFIKSKLKKEPDEVVIFRDG 71
Score = 22.1 bits (42), Expect(2) = 3.6
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +3 / +1
Query: 546 LWWIVKFAILRTSTSTC 596
+WW++K + STC
Sbjct: 592 IWWMMKVNLKGVPQSTC 642
>gb|DR687832.1|DR687832 EST1077915 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX11 3' end, mRNA sequence
Length = 800
Score = 32.2 bits (64), Expect = 4.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2 / +1
Query: 419 QIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNV 535
Q+ ++CK++ + +PK + +H +F T S DN+
Sbjct: 370 QLTQSCKYVQGRQTPKIRCKCRCEFNHVRFHSTVSNDNI 486
>gb|DR689728.1|DR689728 EST1079814 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACM52 3' end, mRNA sequence
Length = 805
Score = 32.2 bits (64), Expect = 4.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2 / +2
Query: 419 QIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNV 535
Q+ ++CK++ + +PK + +H +F T S DN+
Sbjct: 359 QLTQSCKYVQGRQTPKIRCKCRCEFNHVRFHSTVSNDNI 475
>gb|DT634456.1|DT634456 EST1149387 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG618 3' end, mRNA sequence
Length = 716
Score = 32.2 bits (64), Expect = 4.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2 / +3
Query: 419 QIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTASPDNV 535
Q+ ++CK++ + +PK + +H +F T S DN+
Sbjct: 309 QLTQSCKYVQGRQTPKIRCKCRCEFNHVRFHSTVSNDNI 425
>gb|BM158616.1|BM158616 NXLV_036_H12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_036_H12 5' similar to Arabidopsis thaliana
sequence At4g01070 putative flavonol glucosyltransferase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 387
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 97 PRDSTIVWWRRSRGLSFWV 153
>gb|CF385981.1|CF385981 RTDR1_7_E07.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_7_E07_A015 5', mRNA
sequence
Length = 732
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 165 PRDSTIVWWRRSRGLSFWV 221
>gb|CF387087.1|CF387087 RTDR1_10_C07.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_10_C07_A015 5', mRNA
sequence
Length = 679
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 334 PRDSTIVWWRRSRGLSFWV 390
>gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_C11_A029 5', mRNA sequence
Length = 801
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 197 PRDSTIVWWRRSRGLSFWV 253
>gb|BX682036.1|BX682036 BX682036 RS Pinus pinaster cDNA clone RS68G05, mRNA sequence
Length = 186
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 104 PRDSTIVWWRRSRGLSFWV 160
>gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_E11_A029 5', mRNA sequence
Length = 820
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 299 PRDSTIVWWRRSRGLSFWV 355
>gb|CV033205.1|CV033205 RTNACL1_33_B10.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_33_B10_A029 3', mRNA sequence
Length = 834
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 313 PRDSTIVWWRRSRGLSFWV 257
>gb|CX645779.1|CX645779 COLD1_5_F07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_5_F07_A029 3', mRNA sequence
Length = 815
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 146 PRDSTIVWWRRSRGLSFWV 202
>gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_F11_A034 3', mRNA sequence
Length = 792
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 229 PRDSTIVWWRRSRGLSFWV 285
>gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_F11_A034 5', mRNA sequence
Length = 835
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 286 PRDSTIVWWRRSRGLSFWV 342
>gb|DR049066.1|DR049066 RTBOR1_13_C03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_13_C03_A029 3', mRNA sequence
Length = 827
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 46 PRDSTIVWWRRSRGLSFWV 102
>gb|DR051169.1|DR051169 RTBOR1_28_D06.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_28_D06_A029 3', mRNA sequence
Length = 695
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 393 PRSSTLSWIRSSRHVSFWM 449
PR ST+ W R SR +SFW+
Sbjct: 12 PRDSTIVWWRRSRGLSFWV 68
>gb|DR094529.1|DR094529 STRR1_15_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_D08_A033 3', mRNA sequence
Length = 828
Score = 31.8 bits (63), Expect = 5.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2 / -1
Query: 461 PKFTVIVAQKNHHTKFFQTASPDNVLPGTVV 553
P F + A + H T FF+T+SP ++ TV+
Sbjct: 585 PSFIALFANRFHFTAFFRTSSPALLVLSTVI 493
>gb|DR094610.1|DR094610 STRR1_15_D08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_D08_A033 5', mRNA sequence
Length = 825
Score = 31.8 bits (63), Expect = 5.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2 / -2
Query: 461 PKFTVIVAQKNHHTKFFQTASPDNVLPGTVV 553
P F + A + H T FF+T+SP ++ TV+
Sbjct: 677 PSFIALFANRFHFTAFFRTSSPALLVLSTVI 585
>gb|DR386116.1|DR386116 RTHG1_13_B12.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_B12_A029 3', mRNA sequence
Length = 815
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 332 GKRKPEHIIIFRDGVSESQFTQVINIELDQ 421
G+R +HI I RD V ++ +QV+++ + Q
Sbjct: 560 GRRSRQHISILRDRVDDANCSQVVDVNVGQ 649
>gb|DT633535.1|DT633535 EST1148466 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFV90 3' end, mRNA sequence
Length = 791
Score = 31.8 bits (63), Expect = 5.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 405 LMTWVN*LSLTPSLKIIMCSGF 340
L+TW + SL PSL ++ C GF
Sbjct: 665 LLTWQHIASLPPSLPVVYCGGF 730
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 439,011,144
Number of Sequences: 355925
Number of extensions: 6804508
Number of successful extensions: 46155
Number of sequences better than 10.0: 158
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9974764325
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)