TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.569
(1263 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR683828.1|DR683828 EST1073904 Normalized pine embryo li... 451 e-138
gb|CF399849.1|CF399849 RTWW1_1_D05.g1_A015 Well-watered lob... 430 e-120
gb|DR049704.1|DR049704 RTBOR1_18_B06.g1_A029 Roots plus add... 395 e-109
gb|DR059216.1|DR059216 RTNIT1_16_A01.g1_A029 Roots minus ni... 388 e-107
gb|DR022608.1|DR022608 STRS1_52_E11.b1_A034 Shoot tip pitch... 362 3e-099
gb|DR022316.1|DR022316 STRS1_50_F11.b1_A034 Shoot tip pitch... 344 7e-094
gb|CX649825.1|CX649825 COLD1_41_E09.g1_A029 Root cold Pinus... 321 7e-087
gb|DR688361.1|DR688361 EST1078445 Normalized pine embryo li... 255 5e-074
gb|CF475540.1|CF475540 RTWW2_12_A06.g1_A021 Well-watered lo... 274 1e-072
gb|CF395791.1|CF395791 RTDS2_17_D04.g1_A021 Drought-stresse... 265 3e-070
gb|CF472877.1|CF472877 RTDS1_12_A06.b1_A015 Drought-stresse... 256 2e-067
gb|CF472832.1|CF472832 RTDS1_12_A05.b1_A015 Drought-stresse... 253 2e-066
gb|BM134211.1|BM134211 NXLV_018_B02_F NXLV (Nsf Xylem Late ... 249 3e-065
gb|CF475415.1|CF475415 RTWW2_12_A06.b1_A021 Well-watered lo... 245 6e-064
gb|CF399777.1|CF399777 RTWW1_1_D05.b1_A015 Well-watered lob... 237 9e-062
gb|BF609050.1|BF609050 NXSI_039_G11_F NXSI (Nsf Xylem Side ... 235 6e-061
gb|CF475079.1|CF475079 RTWW2_5_G11.g1_A021 Well-watered lob... 233 2e-060
gb|DR694395.1|DR694395 EST1084487 Normalized pine embryo li... 229 4e-059
gb|CX649743.1|CX649743 COLD1_41_E09.b1_A029 Root cold Pinus... 222 3e-057
gb|DT638624.1|DT638624 EST1153555 Normalized pine embryo li... 176 6e-056
gb|CF475000.1|CF475000 RTWW2_5_G11.b1_A021 Well-watered lob... 201 7e-051
gb|CF472897.1|CF472897 RTDS1_12_A05.g1_A015 Drought-stresse... 184 1e-045
gb|CF472908.1|CF472908 RTDS1_12_A06.g1_A015 Drought-stresse... 182 6e-045
gb|BX784112.1|BX784112 BX784112 Pinus pinaster differenciat... 107 2e-044
gb|DT634670.1|DT634670 EST1149601 Normalized pine embryo li... 103 8e-041
gb|DR685422.1|DR685422 EST1075499 Normalized pine embryo li... 92 5e-037
gb|AW010860.1|AW010860 ST12C08 Pine TriplEx shoot tip libra... 114 8e-030
gb|BM493698.1|BM493698 NXLV_069_D04_F NXLV (Nsf Xylem Late ... 130 2e-029
gb|CO198652.1|CO198652 GEO1_15_A02.g1_A029 Root gravitropis... 105 7e-022
>gb|DR683828.1|DR683828 EST1073904 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAL74 3' end, mRNA sequence
Length = 864
Score = 451 bits (980), Expect(3) = e-138
Identities = 184/249 (73%), Positives = 214/249 (85%)
Frame = -3 / +3
Query: 1150 DVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRGIGHTANPSNSLVLKVLSASPSAYSAN 971
+ + D TLIV DD+I S VILG KK+EAPVLFRGI H+ NP+NSLVLKVLSASPSAYSAN
Sbjct: 90 ETDSDDTLIVSDDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSAN 269
Query: 970 PKTKLSLPPSLTGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKAGSKTRYERA 791
PK LS PP+L GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K GS + ++
Sbjct: 270 PKADLSRPPALIGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKS 449
Query: 790 GNEQFVTETSKWVFHERGHLKAVNVKHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWK 611
GNEQFV+E SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WK
Sbjct: 450 GNEQFVSELSKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWK 629
Query: 610 PYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGLSFT 431
PY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGVFQFK+EYQR+GYT LS +
Sbjct: 630 PYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLS 809
Query: 430 KQIPVRPYR 404
KQI + ++
Sbjct: 810 KQISCKAFQ 836
Score = 317 bits (687), Expect(3) = 1e-090
Identities = 148/243 (60%), Positives = 170/243 (69%)
Frame = +3 / -3
Query: 423 ICFVKDKPVYPSLWYSTLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSA 602
IC ++++ V P+L YS LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA
Sbjct: 817 ICLLRERLV*PTL*YSILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSA 638
Query: 603 TYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVSPTLWCLTLTALRCPLSWKTHLLVSVTNC 782
GFQ P HS*ISTEYSR S++RY+ GS VSPTL C T TALR PLSWKTHLL S TNC
Sbjct: 637 M*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNC 458
Query: 783 SFPALSYLVLLPAF*TPDFRNRLLKRSSDPDSSTRALFLACITETSDIADPVSDGGNDNL 962
S P + LP F T D +N LL +S DP+ TRALFLAC T+T +I DP+S GG D
Sbjct: 457 SLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRS 278
Query: 963 VFGLAEYADGEADRTFRTKLFDGLAVCPIPRNNTGASIFLDPSMTSD*IRSSPTIKV*SP 1142
G AEYA+GEAD TF T+LF G IPR +TGAS F P +T + I SS TIKV S
Sbjct: 277 ALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESITSSLTIKVSSL 98
Query: 1143 STS 1151
S S
Sbjct: 97 SVS 89
Score = 186 bits (400), Expect(2) = 1e-046
Identities = 82/166 (49%), Positives = 116/166 (69%)
Frame = +2 / -2
Query: 422 NLLCKRQTSISQPLVLNFELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIIS 601
NLL +R+T ++ PL+LNF+LEN++++RN E +*+++V+ QNIRTHH KL LH+I
Sbjct: 818 NLLAQRETCVTNPLILNFKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVIC 639
Query: 602 NIWLPACSRPFIDLNRVFQVIVNAVHAWFIGLPNLVVLNINSLKVPPLMEDPFACLCHKL 781
N+ LP S PFI+ N VFQVI +++H+ F LPN +LNI SLK+ P ME+P A HKL
Sbjct: 638 NVRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKL 459
Query: 782 LISSSLVSRFATSLLNTRLQEPVAKKIK*SR*QHPSIISCLHNRNQ 919
LI++ + L N ++ VAK IK SR ++PSIISCLH+ +Q
Sbjct: 458 LIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHD*HQ 321
Score = 138 bits (295), Expect = 1e-031
Identities = 85/203 (41%), Positives = 112/203 (55%)
Frame = -2 / +2
Query: 1031 SIKQFGXXXXXXXXXXXXXXPKD*VIVASIAYWVSYITGFGYAGKK*CSGAAIWIT*SF* 852
S KQ G + * I +S + Y G AGKK*CSG+ WI * *
Sbjct: 209 SCKQPGAESAICFTFCILCKSQS*SISSSSTDRIFYFLGVSRAGKK*CSGSYFWIP*FI* 388
Query: 851 QPVPEVWCSKGW*QNEIRESWK*AICDRDKQMGLP*EGAP*GC*C*APQGWGDQ*TRHVP 672
Q V ++ C K W + + W+*A+C KQ+G P*+G+ *GC C A WGD *T +V
Sbjct: 389 QQVFQIPC*KVWQFS*ACKKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVS 568
Query: 671 H*R*PGILC*DL*MVWNKLEAICC**CATPVFHDESLCSENYVE*QQGFILNILQSS*CL 492
+ PGIL *+L*M W LEA+ C * A+ V HDESLCSE+ V *Q I + SS* L
Sbjct: 569 NH*SPGILR*NL*MDWKGLEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RL 748
Query: 491 RSFPVQS*VPEAGIYWFVFYKAD 423
FP+ +*V + ++ + +AD
Sbjct: 749 WCFPI*N*VSKGWLHKSLSEQAD 817
Score = 127 bits (272), Expect = 2e-028
Identities = 71/147 (48%), Positives = 82/147 (55%)
Frame = +1 / -1
Query: 466 TQL*TGKLRRHQEL*RMLSINPCCHST*FSEHKDSS*KTGVAHHQQHMASSLFQTIHRSQ 645
TQ * GK + QEL +I CH T SEHKDSS KT +A H Q AS+ FQ+IH+ Q
Sbjct: 774 TQF*IGKHHKRQELGTKQNIIRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHKFQ 595
Query: 646 QSIPGHR*CGTCLVHWSPQPCGA*H*QP*GAPSHGRPICLSLSQIAHFQLSRISFCYQPF 825
+SIPG +* T V SPQ A H QP* P HG+P CL +Q AH Q F
Sbjct: 594 RSIPGDQ*FDT*QVQKSPQLYDAEHLQP*DDPFHGKPTCLIQTQTAHCHFLHAQLNCQTF 415
Query: 826 EHQTSGTGC*KDQVIQIAAPEHYFLPA 906
T C* +Q IQ PEHYFLPA
Sbjct: 414 *QGI*KTCC*INQGIQK*EPEHYFLPA 334
Score = 86.8 bits (183), Expect(2) = 7e-031
Identities = 45/90 (50%), Positives = 53/90 (58%)
Frame = -1 / +1
Query: 690 MNQACTALTMTWNTLLRSMNGLEQAGSHMLLMMCNSSFS**VLMF*KLCRMTTRVYTQHP 511
+N C +TWNT L+ MNGLE+ GS L M C SF+**VLMF*+ C MT Y
Sbjct: 550 LNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT**VLMF*RRCHMTITDYILFR 729
Query: 510 SKFLMSTEFSSSKLSTRGWDILVCLLQSRF 421
SKFL FS+ KLS +G V L SRF
Sbjct: 730 SKFLTFMVFSNLKLSIKGLVTQVSL*ASRF 819
Score = 68.4 bits (143), Expect(2) = 7e-031
Identities = 42/113 (37%), Positives = 57/113 (50%)
Frame = -1 / +1
Query: 1092 YWGLKRLRLLYYFVELDTRLIHQTVWF*KSYLPLHQHTQLTQRLSYRCLHRLLGQLYHWF 913
+W K RL + L I QT W *K YL HT +L Y L L+ W
Sbjct: 148 FWERKSSRLPCFSEGLLIL*ILQTAWC*KCYLLHLLHTLQIPKLIYLVLQH**DLLFPWC 327
Query: 912 RLCRQEIMLGCCYLDHLIFLATGS*SLVFKRLVAKRDTRELEMSNL*QRQANG 754
+ CRQEIMLG +LD LI+LAT + + K L + +++ MS+L A+G
Sbjct: 328 QSCRQEIMLGFLFLDPLIYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASG 486
Score = 43.7 bits (89), Expect(3) = e-138
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -3 / +1
Query: 1228 IATECGVDFDEDPXXMVIDHXXYA 1157
IA +CGVDFDED +VIDH YA
Sbjct: 13 IAADCGVDFDEDLGALVIDHTSYA 84
Score = 38.6 bits (78), Expect(3) = e-138
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3 / +1
Query: 427 QIPVRPYRHNEYERFI 380
+ PVRP+RHNEYERFI
Sbjct: 814 RFPVRPFRHNEYERFI 861
Score = 29.9 bits (59), Expect(3) = 1e-090
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 378 VMNLSYSLCL*GRTG 422
+MNLSYSLCL G TG
Sbjct: 863 LMNLSYSLCLKGLTG 819
Score = 26.7 bits (52), Expect(3) = 1e-090
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2 / -1
Query: 1154 SGIXXVVNNHXXWILIKINPTL 1219
+ I V+NN + IKINP +
Sbjct: 87 NSIASVINNQSTQVFIKINPAV 22
Score = 25.4 bits (49), Expect(2) = 1e-046
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1 / -3
Query: 1156 RHXXCGQ*PXXLDPHQNQPHT 1218
+H C Q*P HQNQP +
Sbjct: 85 QHS*CDQ*PKHPGLHQNQPRS 23
>gb|CF399849.1|CF399849 RTWW1_1_D05.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_1_D05_A015 5', mRNA sequence
Length = 685
Score = 430 bits (934), Expect = e-120
Identities = 176/228 (77%), Positives = 200/228 (87%)
Frame = -3 / +2
Query: 1108 IQSDVILGSKKIEAPVLFRGIGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGS 929
I S VILG KK+EAPVLFRGI H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS
Sbjct: 2 IDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGS 181
Query: 928 AISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKAGSKTRYERAGNEQFVTETSKWVF 749
+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K GS + ++GNEQFV+E SKWVF
Sbjct: 182 SISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKWVF 361
Query: 748 HERGHLKAVNVKHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMM 569
HERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MM
Sbjct: 362 HERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMM 541
Query: 568 SPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGLSFTKQ 425
SPYVLKT+S+DN GLYS SF+VPDVYGVFQFK+EYQR+GYT LS +KQ
Sbjct: 542 SPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQ 685
Score = 303 bits (656), Expect = 2e-081
Identities = 137/224 (61%), Positives = 158/224 (70%)
Frame = +3 / -2
Query: 426 CFVKDKPVYPSLWYSTLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSAT 605
C ++++ V P+L YS LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA
Sbjct: 684 CLLRERLV*PTL*YSILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM 505
Query: 606 YGFQLVPDHS*ISTEYSRSSLMRYMPGSLVSPTLWCLTLTALRCPLSWKTHLLVSVTNCS 785
GFQ P HS*ISTEYSR S++RY+ GS VSPTL C T TALR PLSWKTHLL S TNCS
Sbjct: 504 *GFQSFPVHS*ISTEYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNCS 325
Query: 786 FPALSYLVLLPAF*TPDFRNRLLKRSSDPDSSTRALFLACITETSDIADPVSDGGNDNLV 965
P + LP F T D +N LL +S DP+ TRALFLAC T+T +I DP+S GG D
Sbjct: 324 LPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSA 145
Query: 966 FGLAEYADGEADRTFRTKLFDGLAVCPIPRNNTGASIFLDPSMT 1097
G AEYA+GEAD TF T+LF G IPR +TGAS F P +T
Sbjct: 144 LGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKIT 13
Score = 185 bits (399), Expect = 5e-046
Identities = 82/165 (49%), Positives = 115/165 (69%)
Frame = +2 / -1
Query: 425 LLCKRQTSISQPLVLNFELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISN 604
LL +R+T ++ PL+LNF+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N
Sbjct: 685 LLAQRETCVTNPLILNFKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICN 506
Query: 605 IWLPACSRPFIDLNRVFQVIVNAVHAWFIGLPNLVVLNINSLKVPPLMEDPFACLCHKLL 784
+ LP S PFI+ N VFQVI +++H+ F LPN +LNI SLK+ P ME+P A HKLL
Sbjct: 505 VRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKLL 326
Query: 785 ISSSLVSRFATSLLNTRLQEPVAKKIK*SR*QHPSIISCLHNRNQ 919
I++ + L N ++ VAK IK SR ++PSIISCLHN +Q
Sbjct: 325 IATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 191
Score = 136 bits (292), Expect = 3e-031
Identities = 83/195 (42%), Positives = 108/195 (55%)
Frame = -2 / +1
Query: 1031 SIKQFGXXXXXXXXXXXXXXPKD*VIVASIAYWVSYITGFGYAGKK*CSGAAIWIT*SF* 852
S KQ G + * I +S + Y G AGKK*CSG+ WI * *
Sbjct: 79 SCKQPGAESAICFTFCILCKSQS*SISSSSTDRIFYFLGVSCAGKK*CSGSYFWIP*FI* 258
Query: 851 QPVPEVWCSKGW*QNEIRESWK*AICDRDKQMGLP*EGAP*GC*C*APQGWGDQ*TRHVP 672
Q V ++ C K W + + W+*A+C KQ+G P*+G+ *GC C A WGD *T +V
Sbjct: 259 QQVFQIPC*KVWQFS*ACKKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVS 438
Query: 671 H*R*PGILC*DL*MVWNKLEAICC**CATPVFHDESLCSENYVE*QQGFILNILQSS*CL 492
+ PGIL *+L*M W LEA+ C * A+ V HDESLCSE+ V *Q I + SS* L
Sbjct: 439 NH*SPGILR*NL*MDWKGLEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RL 618
Query: 491 RSFPVQS*VPEAGIY 447
FP+ +*V + ++
Sbjct: 619 WCFPI*N*VSKGWLH 663
Score = 127 bits (272), Expect = 2e-028
Identities = 71/147 (48%), Positives = 82/147 (55%)
Frame = +1 / -3
Query: 466 TQL*TGKLRRHQEL*RMLSINPCCHST*FSEHKDSS*KTGVAHHQQHMASSLFQTIHRSQ 645
TQ * GK + QEL +I CH T SEHKDSS KT +A H Q AS+ FQ+IH+ Q
Sbjct: 644 TQF*IGKHHKRQELGTKQNIIRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHKFQ 465
Query: 646 QSIPGHR*CGTCLVHWSPQPCGA*H*QP*GAPSHGRPICLSLSQIAHFQLSRISFCYQPF 825
+SIPG +* T V SPQ A H QP* P HG+P CL +Q AH Q F
Sbjct: 464 RSIPGDQ*FDT*QVQKSPQLYDAEHLQP*DDPFHGKPTCLIQTQTAHCHFLHAQLNCQTF 285
Query: 826 EHQTSGTGC*KDQVIQIAAPEHYFLPA 906
T C* +Q IQ PEHYFLPA
Sbjct: 284 *QGI*KTCC*INQGIQK*EPEHYFLPA 204
Score = 82.6 bits (174), Expect(2) = 2e-030
Identities = 40/78 (51%), Positives = 48/78 (61%)
Frame = -1 / +3
Query: 690 MNQACTALTMTWNTLLRSMNGLEQAGSHMLLMMCNSSFS**VLMF*KLCRMTTRVYTQHP 511
+N C +TWNT L+ MNGLE+ GS L M C SF+**VLMF*+ C MT Y
Sbjct: 420 LNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT**VLMF*RRCHMTITDYILFR 599
Query: 510 SKFLMSTEFSSSKLSTRG 457
SKFL FS+ KLS +G
Sbjct: 600 SKFLTFMVFSNLKLSIKG 653
Score = 71.2 bits (149), Expect(2) = 2e-030
Identities = 43/113 (38%), Positives = 58/113 (51%)
Frame = -1 / +3
Query: 1092 YWGLKRLRLLYYFVELDTRLIHQTVWF*KSYLPLHQHTQLTQRLSYRCLHRLLGQLYHWF 913
+W K RL + L I QT W *K YL HT +L Y L L+ W
Sbjct: 18 FWERKSSRLPCFSEGLLIL*ILQTAWC*KCYLLHLLHTLQIPKLIYLVLQH**DLLFPWC 197
Query: 912 RLCRQEIMLGCCYLDHLIFLATGS*SLVFKRLVAKRDTRELEMSNL*QRQANG 754
+LCRQEIMLG +LD LI+LAT + + K L + +++ MS+L A+G
Sbjct: 198 QLCRQEIMLGFLFLDPLIYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASG 356
>gb|DR049704.1|DR049704 RTBOR1_18_B06.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_18_B06_A029 5', mRNA sequence
Length = 728
Score = 395 bits (857), Expect = e-109
Identities = 162/220 (73%), Positives = 184/220 (83%)
Frame = -3 / +1
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 67 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 246
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSG 869
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+QARNNARVL+SG
Sbjct: 247 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISG 426
Query: 868 SLDLFSNRFLKSGVQKAGSKTRYERAGNEQFVTETSKWVFHERGHLKAVNVKHHKVGETN 689
SLDLFSN+F KS V+K GS + ++GNEQFV+E SKWVFHERGHLKAVNV+H KVGET
Sbjct: 427 SLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKWVFHERGHLKAVNVQHRKVGETF 606
Query: 688 EPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMM 569
EP MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MM
Sbjct: 607 EPAMYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMM 726
Score = 248 bits (535), Expect = 8e-065
Identities = 117/193 (60%), Positives = 133/193 (68%)
Frame = +3 / -1
Query: 567 LIMKNWSCTSSATYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVSPTLWCLTLTALRCPLS 746
LIM N +CTSSA GFQ P HS*ISTEYSR S++RY+ GS VSPTL C T TALR PLS
Sbjct: 728 LIM*NCTCTSSAM*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLS 549
Query: 747 WKTHLLVSVTNCSFPALSYLVLLPAF*TPDFRNRLLKRSSDPDSSTRALFLACITETSDI 926
WKTHLL S TNCS P + LP F T D +N LL +S DP+ TRALFLAC T+T +I
Sbjct: 548 WKTHLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEI 369
Query: 927 ADPVSDGGNDNLVFGLAEYADGEADRTFRTKLFDGLAVCPIPRNNTGASIFLDPSMTSD* 1106
DP+S GG D G AEYA+GEAD TF T+LF G IPR +TGAS F P +T +
Sbjct: 368 EDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLES 189
Query: 1107 IRSSPTIKV*SPS 1145
I SS TIKV*S S
Sbjct: 188 ITSSLTIKV*SLS 150
Score = 131 bits (280), Expect(2) = 2e-046
Identities = 60/117 (51%), Positives = 78/117 (66%)
Frame = +2 / -3
Query: 569 HHEKLELHIISNIWLPACSRPFIDLNRVFQVIVNAVHAWFIGLPNLVVLNINSLKVPPLM 748
HH KL LH+I N+ LP S PFI+ N VFQVI +++H+ F LPN +LNI SLK+ P M
Sbjct: 726 HHVKLHLHVICNVRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTMLNIYSLKMTPFM 547
Query: 749 EDPFACLCHKLLISSSLVSRFATSLLNTRLQEPVAKKIK*SR*QHPSIISCLHNRNQ 919
E+P A HKLLI++ + L N ++ VAK IK SR ++PSIISCLHN +Q
Sbjct: 546 ENPLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 376
Score = 111 bits (236), Expect = 1e-023
Identities = 66/155 (42%), Positives = 84/155 (54%)
Frame = -2 / +3
Query: 1031 SIKQFGXXXXXXXXXXXXXXPKD*VIVASIAYWVSYITGFGYAGKK*CSGAAIWIT*SF* 852
S KQ G + * I +S + Y G AGKK*CSG+ WI * *
Sbjct: 264 SCKQPGAESAICFTFCILCKSQS*SISSSSTDRIFYFLGVSCAGKK*CSGSYFWIP*FI* 443
Query: 851 QPVPEVWCSKGW*QNEIRESWK*AICDRDKQMGLP*EGAP*GC*C*APQGWGDQ*TRHVP 672
Q V ++ C K W + + W+*A+C KQ+G P*+G+ *GC C A WGD *T +V
Sbjct: 444 QQVFQIPC*KVWQFS*ACKKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVS 623
Query: 671 H*R*PGILC*DL*MVWNKLEAICC**CATPVFHDE 567
+ PGIL *+L*M W LEA+ C * A+ V HDE
Sbjct: 624 NH*SPGILR*NL*MDWKGLEALHCR*RASAVLHDE 728
Score = 97.3 bits (206), Expect(2) = 6e-025
Identities = 54/113 (47%), Positives = 63/113 (55%)
Frame = +1 / -2
Query: 568 SS*KTGVAHHQQHMASSLFQTIHRSQQSIPGHR*CGTCLVHWSPQPCGA*H*QP*GAPSH 747
SS KT +A H Q AS+ FQ+IH+ Q+SIPG +* T V SPQ A H QP* P H
Sbjct: 727 SSCKTALARHLQCKASNPFQSIHKFQRSIPGDQ*FDT*QVQKSPQLYDAEHLQP*DDPFH 548
Query: 748 GRPICLSLSQIAHFQLSRISFCYQPFEHQTSGTGC*KDQVIQIAAPEHYFLPA 906
G+P CL +Q AH Q F T C* +Q IQ PEHYFLPA
Sbjct: 547 GKPTCLIQTQTAHCHFLHAQLNCQTF*QGI*KTCC*INQGIQK*EPEHYFLPA 389
Score = 76.2 bits (160), Expect(2) = 2e-046
Identities = 38/106 (35%), Positives = 58/106 (54%)
Frame = +2 / -3
Query: 944 WRQR*LSLWVS*VC*WRGR*DFQNQTV*WISRVSNSTK*YRSLNLFRPQYDI*LNKIITN 1123
WR R*+S + VC R* FQ+Q V I R+SN ++ + SL LF Q ++ ++ I+T+
Sbjct: 351 WRTR*ISFGICRVCRR*SR*HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTH 172
Query: 1124 NQGVIAFNIHSGIXXVVNNHXXWILIKINPTLCRNXXXSTXXGXXS 1261
NQ +I + + I V+NN + IKINP + + G S
Sbjct: 171 NQSMITVSFRNSIASVINNQSTQVFIKINPAVSSDITNEIRAGSVS 34
Score = 40.9 bits (83), Expect(2) = 6e-025
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1 / -2
Query: 1063 QEPQSF*TPV*HLTE*DHHQQSRCDRLQHP*RHXXCGQ*PXXLDPHQNQPHT 1218
+EP++F P * H QS+ D Q +H C Q*P HQNQP +
Sbjct: 232 REPRAFSLPK*PWNRLHRHSQSKYDHCQFSKQHS*CDQ*PKHPGLHQNQPRS 77
>gb|DR059216.1|DR059216 RTNIT1_16_A01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_16_A01_A029 5', mRNA sequence
Length = 618
Score = 388 bits (842), Expect = e-107
Identities = 154/202 (76%), Positives = 178/202 (88%)
Frame = -3 / +2
Query: 943 SLTGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKAGSKTRYERAGNEQFVTET 764
+L GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K GS + ++GNEQFV+E
Sbjct: 11 ALIGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSEL 190
Query: 763 SKWVFHERGHLKAVNVKHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQL 584
SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDVQ+
Sbjct: 191 SKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDVQV 370
Query: 583 QFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVRPYR 404
QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGVFQFK+EYQR+GYT LS +KQIPVRP+R
Sbjct: 371 QFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIPVRPFR 550
Query: 403 HNEYERFITSAYPYYTASFSTM 338
HNEYERFI +AYPYY +FS M
Sbjct: 551 HNEYERFIKAAYPYYGGAFSMM 616
Score = 280 bits (605), Expect = 2e-074
Identities = 129/201 (64%), Positives = 148/201 (73%)
Frame = +3 / -1
Query: 339 IVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWYSTLNWKTP*TSGTLKDV 518
I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L YS LNWKTP*TSGT +
Sbjct: 615 IMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*YSILNWKTP*TSGTWNET 436
Query: 519 EYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVS 698
EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*ISTEYSR S++RY+ GS VS
Sbjct: 435 EYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVS 256
Query: 699 PTLWCLTLTALRCPLSWKTHLLVSVTNCSFPALSYLVLLPAF*TPDFRNRLLKRSSDPDS 878
PTL C T TALR PLSWKTHLL S TNCS P + LP F T D +N LL +S DP+
Sbjct: 255 PTLRC*TFTALR*PLSWKTHLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEI 76
Query: 879 STRALFLACITETSDIADPVS 941
TRALFLAC T+T +I DP+S
Sbjct: 75 RTRALFLACTTDTKEIEDPIS 13
Score = 209 bits (451), Expect = 3e-053
Identities = 93/194 (47%), Positives = 131/194 (67%)
Frame = +2 / -3
Query: 338 HR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLNFELENSVDIRNFEGC 517
H K S++W+ EP I V+P R + NLL +R+T ++ PL+LNF+LEN++++RN E
Sbjct: 616 HHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILNFKLENTINVRNLERN 437
Query: 518 *V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRVFQVIVNAVHAWFIGL 697
+*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N VFQVI +++H+ F L
Sbjct: 436 RI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGVFQVISDSIHSRFKSL 257
Query: 698 PNLVVLNINSLKVPPLMEDPFACLCHKLLISSSLVSRFATSLLNTRLQEPVAKKIK*SR* 877
PN +LNI SLK+ P ME+P A HKLLI++ + L N ++ VAK IK SR
Sbjct: 256 PNFTMLNIYSLKMTPFMENPLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRN 77
Query: 878 QHPSIISCLHNRNQ 919
++PSIISCLHN +Q
Sbjct: 76 KNPSIISCLHN*HQ 35
Score = 155 bits (334), Expect = 4e-037
Identities = 90/198 (45%), Positives = 119/198 (60%)
Frame = -2 / +1
Query: 932 VSYITGFGYAGKK*CSGAAIWIT*SF*QPVPEVWCSKGW*QNEIRESWK*AICDRDKQMG 753
+ Y G AGKK*CSG+ WI * *Q V ++ C K W + + W+*A+C KQ+G
Sbjct: 22 IFYFLGVSCAGKK*CSGSYFWIP*FI*QQVFQIPC*KVWQFS*ACKKWQ*AVCV*IKQVG 201
Query: 752 LP*EGAP*GC*C*APQGWGDQ*TRHVPH*R*PGILC*DL*MVWNKLEAICC**CATPVFH 573
P*+G+ *GC C A WGD *T +V + PGIL *+L*M W LEA+ C * A+ V H
Sbjct: 202 FP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKGLEALHCR*RASAVLH 381
Query: 572 DESLCSENYVE*QQGFILNILQSS*CLRSFPVQS*VPEAGIYWFVFYKADSSAPLQA*RV 393
DESLCSE+ V *Q I + SS* L FP+ +*V + ++ + +ADS QA R+
Sbjct: 382 DESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSLSEQADSCKAFQAQRI 561
Query: 392 *EVHNISVPILHCLIFND 339
*+VH + IL IF+D
Sbjct: 562 *KVH*SCLSILWRCIFHD 615
Score = 127 bits (272), Expect = 2e-028
Identities = 71/147 (48%), Positives = 82/147 (55%)
Frame = +1 / -2
Query: 466 TQL*TGKLRRHQEL*RMLSINPCCHST*FSEHKDSS*KTGVAHHQQHMASSLFQTIHRSQ 645
TQ * GK + QEL +I CH T SEHKDSS KT +A H Q AS+ FQ+IH+ Q
Sbjct: 488 TQF*IGKHHKRQELGTKQNIIRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHKFQ 309
Query: 646 QSIPGHR*CGTCLVHWSPQPCGA*H*QP*GAPSHGRPICLSLSQIAHFQLSRISFCYQPF 825
+SIPG +* T V SPQ A H QP* P HG+P CL +Q AH Q F
Sbjct: 308 RSIPGDQ*FDT*QVQKSPQLYDAEHLQP*DDPFHGKPTCLIQTQTAHCHFLHAQLNCQTF 129
Query: 826 EHQTSGTGC*KDQVIQIAAPEHYFLPA 906
T C* +Q IQ PEHYFLPA
Sbjct: 128 *QGI*KTCC*INQGIQK*EPEHYFLPA 48
Score = 101 bits (215), Expect(2) = 9e-031
Identities = 54/115 (46%), Positives = 65/115 (56%)
Frame = -1 / +3
Query: 690 MNQACTALTMTWNTLLRSMNGLEQAGSHMLLMMCNSSFS**VLMF*KLCRMTTRVYTQHP 511
+N C +TWNT L+ MNGLE+ GS L M C SF+**VLMF*+ C MT Y
Sbjct: 264 LNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT**VLMF*RRCHMTITDYILFR 443
Query: 510 SKFLMSTEFSSSKLSTRGWDILVCLLQSRFQCALTGITSMRGS*HQRTHTTLPHF 346
SKFL FS+ KLS +G V L SRF L+G T+M+GS H HF
Sbjct: 444 SKFLTFMVFSNLKLSIKGLVTQVSL*ASRFL*GLSGTTNMKGSLKLPIHIMEVHF 608
Score = 53.3 bits (110), Expect(2) = 9e-031
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = -1 / +3
Query: 927 LYHWFRLCRQEIMLGCCYLDHLIFLATGS*SLVFKRLVAKRDTRELEMSNL*QRQANG 754
L+ W +LCRQEIMLG +LD LI+LAT + + K L + +++ MS+L A+G
Sbjct: 27 LFPWCQLCRQEIMLGFLFLDPLIYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASG 200
>gb|DR022608.1|DR022608 STRS1_52_E11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_E11_A034 3', mRNA sequence
Length = 826
Score = 362 bits (785), Expect = 3e-099
Identities = 141/189 (74%), Positives = 162/189 (85%)
Frame = -3 / +3
Query: 859 LFSNRFLKSGVQKAGSKTRYERAGNEQFVTETSKWVFHERGHLKAVNVKHHKVGETNEPG 680
LFSN+F KS V+K GS + ++GNEQFV+E SKWVFHERGHLKAVNV+H KVGET EP
Sbjct: 3 LFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKWVFHERGHLKAVNVQHRKVGETFEPA 182
Query: 679 MYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVP 500
MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VP
Sbjct: 183 MYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVP 362
Query: 499 DVYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIF 320
DVYGVFQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF
Sbjct: 363 DVYGVFQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIF 542
Query: 319 SLVYLYHK* 293
L +LYHK*
Sbjct: 543 GLFFLYHK* 569
Score = 250 bits (541), Expect = 1e-065
Identities = 119/191 (62%), Positives = 136/191 (71%)
Frame = +3 / -1
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC +K++ V P+L Y
Sbjct: 574 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLKERLV*PTL*Y 395
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 394 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 215
Query: 648 EYSRSSLMRYMPGSLVSPTLWCLTLTALRCPLSWKTHLLVSVTNCSFPALSYLVLLPAF* 827
EYSR S++RY+ GS VSPTL C T TALR PLSWKTHLL S TNCS P + LP F
Sbjct: 214 EYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNCSLPLFACSTELPNFL 35
Query: 828 TPDFRNRLLKR 860
T D +N LL +
Sbjct: 34 TGDLKNLLLNK 2
Score = 188 bits (404), Expect = 1e-046
Identities = 82/188 (43%), Positives = 123/188 (65%)
Frame = +2 / -3
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 569 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 390
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRV 652
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N V
Sbjct: 389 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 210
Query: 653 FQVIVNAVHAWFIGLPNLVVLNINSLKVPPLMEDPFACLCHKLLISSSLVSRFATSLLNT 832
FQVI +++H+ F LPN +LNI SLK+ P ME+P A HKLLI++ + L N
Sbjct: 209 FQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKLLIATFCMLN*TAKLFNR 30
Query: 833 RLQEPVAK 856
++ VAK
Sbjct: 29 GFEKLVAK 6
Score = 134 bits (288), Expect = 1e-030
Identities = 83/195 (42%), Positives = 114/195 (58%)
Frame = -2 / +2
Query: 854 *QPVPEVWCSKGW*QNEIRESWK*AICDRDKQMGLP*EGAP*GC*C*APQGWGDQ*TRHV 675
*Q V ++ C K W + + W+*A+C KQ+G P*+G+ *GC C A WGD *T +V
Sbjct: 8 *QQVFQIPC*KVWQFS*ACKKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYV 187
Query: 674 PH*R*PGILC*DL*MVWNKLEAICC**CATPVFHDESLCSENYVE*QQGFILNILQSS*C 495
+ PGIL *+L*M W LEA+ C * A+ V HDESLCSE+ V *Q I + SS*
Sbjct: 188 SNH*SPGILR*NL*MDWKGLEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*R 367
Query: 494 LRSFPVQS*VPEAGIYWFVFYKADSSAPLQA*RV*EVHNISVPILHCLIFNDVCFLHILA 315
L FP+ +*V + ++ +F +ADS QA R+*+VH + IL IF+D FL+
Sbjct: 368 LWCFPI*N*VSKGWLHKSLFEQADSCKAFQAQRI*KVH*SCLSILWRCIFHDDRFLYFWF 547
Query: 314 CVPVPQIKDSRERTS 270
+ + IK + S
Sbjct: 548 VLLIS*IKQGDRKGS 592
Score = 118 bits (252), Expect = 9e-026
Identities = 71/154 (46%), Positives = 85/154 (55%)
Frame = +1 / -2
Query: 325 *RKHTSLKMRQCSMGTLML*TSHTRYACKGALESAL*KTNQYIPASGTQL*TGKLRRHQE 504
*R +S KM +M + *T H R A K ESA K + TQ * GK + QE
Sbjct: 537 *RNLSSWKMHLHNMDRQL**TFHIRCA*KALQESACSKRDLCNQPFDTQF*IGKHHKRQE 358
Query: 505 L*RMLSINPCCHST*FSEHKDSS*KTGVAHHQQHMASSLFQTIHRSQQSIPGHR*CGTCL 684
L +I CH T SEHKDSS KT +A H Q AS+ FQ+IH+ Q+SIPG +* T
Sbjct: 357 LGTKQNIIRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHKFQRSIPGDQ*FDT*Q 178
Query: 685 VHWSPQPCGA*H*QP*GAPSHGRPICLSLSQIAH 786
V SPQ A H QP* P HG+P CL +Q AH
Sbjct: 177 VQKSPQLYDAEHLQP*DDPFHGKPTCLIQTQTAH 76
>gb|DR022316.1|DR022316 STRS1_50_F11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_F11_A034 3', mRNA sequence
Length = 792
Score = 344 bits (746), Expect = 7e-094
Identities = 133/178 (74%), Positives = 153/178 (85%)
Frame = -3 / +2
Query: 826 QKAGSKTRYERAGNEQFVTETSKWVFHERGHLKAVNVKHHKVGETNEPGMYRINDDLEYS 647
+K GS + ++GNEQFV+E SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYS
Sbjct: 2 KKFGSSVEHAKSGNEQFVSELSKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYS 181
Query: 646 VEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVE 467
VEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGVFQFK+E
Sbjct: 182 VEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIE 361
Query: 466 YQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFSLVYLYHK* 293
YQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF L +LYHK*
Sbjct: 362 YQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 535
Score = 241 bits (520), Expect = 1e-062
Identities = 114/179 (63%), Positives = 129/179 (72%)
Frame = +3 / -1
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC +K++ V P+L Y
Sbjct: 540 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLKERLV*PTL*Y 361
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 360 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 181
Query: 648 EYSRSSLMRYMPGSLVSPTLWCLTLTALRCPLSWKTHLLVSVTNCSFPALSYLVLLPAF 824
EYSR S++RY+ GS VSPTL C T TALR PLSWKTHLL S TNCS P + LP F
Sbjct: 180 EYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNCSLPLFACSTELPNF 4
Score = 182 bits (392), Expect = 4e-045
Identities = 77/167 (46%), Positives = 115/167 (68%)
Frame = +2 / -3
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 535 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 356
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRV 652
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N V
Sbjct: 355 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 176
Query: 653 FQVIVNAVHAWFIGLPNLVVLNINSLKVPPLMEDPFACLCHKLLISS 793
FQVI +++H+ F LPN +LNI SLK+ P ME+P A HKLLI++
Sbjct: 175 FQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKLLIAT 35
Score = 130 bits (278), Expect = 2e-029
Identities = 77/176 (43%), Positives = 105/176 (59%)
Frame = -2 / +1
Query: 797 ESWK*AICDRDKQMGLP*EGAP*GC*C*APQGWGDQ*TRHVPH*R*PGILC*DL*MVWNK 618
+ W+*A+C KQ+G P*+G+ *GC C A WGD *T +V + PGIL *+L*M W
Sbjct: 31 KKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKG 210
Query: 617 LEAICC**CATPVFHDESLCSENYVE*QQGFILNILQSS*CLRSFPVQS*VPEAGIYWFV 438
LEA+ C * A+ V HDESLCSE+ V *Q I + SS* L FP+ +*V + ++ +
Sbjct: 211 LEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSL 390
Query: 437 FYKADSSAPLQA*RV*EVHNISVPILHCLIFNDVCFLHILACVPVPQIKDSRERTS 270
F +ADS QA R+*+VH + IL IF+D FL+ + + IK + S
Sbjct: 391 FEQADSCKAFQAQRI*KVH*SCLSILWRCIFHDDRFLYFWFVLLIS*IKQGDRKGS 558
Score = 118 bits (252), Expect = 9e-026
Identities = 71/154 (46%), Positives = 85/154 (55%)
Frame = +1 / -2
Query: 325 *RKHTSLKMRQCSMGTLML*TSHTRYACKGALESAL*KTNQYIPASGTQL*TGKLRRHQE 504
*R +S KM +M + *T H R A K ESA K + TQ * GK + QE
Sbjct: 503 *RNLSSWKMHLHNMDRQL**TFHIRCA*KALQESACSKRDLCNQPFDTQF*IGKHHKRQE 324
Query: 505 L*RMLSINPCCHST*FSEHKDSS*KTGVAHHQQHMASSLFQTIHRSQQSIPGHR*CGTCL 684
L +I CH T SEHKDSS KT +A H Q AS+ FQ+IH+ Q+SIPG +* T
Sbjct: 323 LGTKQNIIRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHKFQRSIPGDQ*FDT*Q 144
Query: 685 VHWSPQPCGA*H*QP*GAPSHGRPICLSLSQIAH 786
V SPQ A H QP* P HG+P CL +Q AH
Sbjct: 143 VQKSPQLYDAEHLQP*DDPFHGKPTCLIQTQTAH 42
>gb|CX649825.1|CX649825 COLD1_41_E09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_E09_A029 5', mRNA sequence
Length = 817
Score = 321 bits (695), Expect = 7e-087
Identities = 124/159 (77%), Positives = 139/159 (87%)
Frame = -3 / -1
Query: 769 ETSKWVFHERGHLKAVNVKHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDV 590
E SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDV
Sbjct: 817 ELSKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDV 638
Query: 589 QLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVRP 410
Q+QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGVFQFK+EYQR+GYT LS +KQIPVRP
Sbjct: 637 QVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIPVRP 458
Query: 409 YRHNEYERFITSAYPYYTASFSTMCAFFIFSLVYLYHK* 293
+RHNEYERFI +AYPYY +FS M FFIF L +LYHK*
Sbjct: 457 FRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 341
Score = 222 bits (480), Expect = 3e-057
Identities = 104/159 (65%), Positives = 119/159 (74%)
Frame = +3 / +3
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L Y
Sbjct: 336 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 515
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 516 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 695
Query: 648 EYSRSSLMRYMPGSLVSPTLWCLTLTALRCPLSWKTHLL 764
EYSR S++RY+ GS VSPTL C T TALR PLSWKTHLL
Sbjct: 696 EYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLL 812
Score = 173 bits (372), Expect = 3e-042
Identities = 72/157 (45%), Positives = 108/157 (68%)
Frame = +2 / +2
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 341 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 520
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRV 652
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N V
Sbjct: 521 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 700
Query: 653 FQVIVNAVHAWFIGLPNLVVLNINSLKVPPLMEDPFA 763
FQVI +++H+ F LPN +LNI SLK+ P ME+P A
Sbjct: 701 FQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA 811
Score = 117 bits (250), Expect = 2e-025
Identities = 72/165 (43%), Positives = 97/165 (58%)
Frame = -2 / -3
Query: 764 KQMGLP*EGAP*GC*C*APQGWGDQ*TRHVPH*R*PGILC*DL*MVWNKLEAICC**CAT 585
KQ+G P*+G+ *GC C A WGD *T +V + PGIL *+L*M W LEA+ C * A+
Sbjct: 812 KQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKGLEALHCR*RAS 633
Query: 584 PVFHDESLCSENYVE*QQGFILNILQSS*CLRSFPVQS*VPEAGIYWFVFYKADSSAPLQ 405
V HDESLCSE+ V *Q I + SS* L FP+ +*V + ++ + +ADS Q
Sbjct: 632 AVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSLSEQADSCKAFQ 453
Query: 404 A*RV*EVHNISVPILHCLIFNDVCFLHILACVPVPQIKDSRERTS 270
A R+*+VH + IL IF+D FL+ + + IK + S
Sbjct: 452 AQRI*KVH*SCLSILWRCIFHDDRFLYFWFVLLIS*IKQGDRKGS 318
>gb|DR688361.1|DR688361 EST1078445 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC538 3' end, mRNA sequence
Length = 797
Score = 255 bits (552), Expect(3) = 5e-074
Identities = 108/154 (70%), Positives = 126/154 (81%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 233 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 412
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSG 869
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+QARNNARVL+SG
Sbjct: 413 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISG 592
Query: 868 SLDLFSNRFLKSGVQKAGSKTRYERAGNEQFVTE 767
SLDLFSN+F KS V+K GS + ++GNEQFV++
Sbjct: 593 SLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSD 694
Score = 149 bits (321), Expect = 3e-035
Identities = 74/150 (49%), Positives = 89/150 (59%)
Frame = +3 / -3
Query: 696 SPTLWCLTLTALRCPLSWKTHLLVSVTNCSFPALSYLVLLPAF*TPDFRNRLLKRSSDPD 875
SP L+ L+ + L S TNCS P + LP F T D +N LL +S DP+
Sbjct: 765 SPQLYDAEHLQLKMTPFMENPLA*SDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPE 586
Query: 876 SSTRALFLACITETSDIADPVSDGGNDNLVFGLAEYADGEADRTFRTKLFDGLAVCPIPR 1055
TRALFLAC T+T +I DP+S GG D G AEYA+GEAD TF T+LF G IPR
Sbjct: 585 IRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPR 406
Query: 1056 NNTGASIFLDPSMTSD*IRSSPTIKV*SPS 1145
+TGAS F P +T + I SS TIKV*S S
Sbjct: 405 KSTGASSFFSPKITLESITSSLTIKV*SLS 316
Score = 76.2 bits (160), Expect(3) = 3e-026
Identities = 38/106 (35%), Positives = 58/106 (54%)
Frame = +2 / -2
Query: 944 WRQR*LSLWVS*VC*WRGR*DFQNQTV*WISRVSNSTK*YRSLNLFRPQYDI*LNKIITN 1123
WR R*+S + VC R* FQ+Q V I R+SN ++ + SL LF Q ++ ++ I+T+
Sbjct: 517 WRTR*ISFGICRVCRR*SR*HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLRIDYIVTH 338
Query: 1124 NQGVIAFNIHSGIXXVVNNHXXWILIKINPTLCRNXXXSTXXGXXS 1261
NQ +I + + I V+NN + IKINP + + G S
Sbjct: 337 NQSMITVSFRNSIASVINNQSTQVFIKINPAVSSDITNEIRAGSVS 200
Score = 47.8 bits (98), Expect(3) = 3e-026
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +2 / -2
Query: 740 PLMEDPFACLCHKLLISSSLVSRFATSLLNTRLQEPVAKKIK*SR*QHPSIISCLHNRNQ 919
P P + HKLLI++ + L N ++ VAK IK SR ++PSIISCL+N +Q
Sbjct: 721 PFHGKPTCLIRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLYN*HQ 542
Score = 35.4 bits (71), Expect(3) = 5e-074
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / +1
Query: 763 SKWVFHERGHLK 728
SKWVFHERGHLK
Sbjct: 697 SKWVFHERGHLK 732
Score = 33.1 bits (66), Expect(3) = 3e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / -1
Query: 699 PTLWCLTLTALRCPLSWKTHLL 764
P L + +LR PLSWKTHLL
Sbjct: 761 PNFTMLNIYSLR*PLSWKTHLL 696
Score = 27.2 bits (53), Expect(3) = 5e-074
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 742 RGHLKAVNVKHHKVGET 692
+G AVNV+H KVGET
Sbjct: 717 KGSS*AVNVQHRKVGET 767
>gb|CF475540.1|CF475540 RTWW2_12_A06.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_12_A06_A021 5', mRNA sequence
Length = 752
Score = 274 bits (592), Expect = 1e-072
Identities = 115/161 (71%), Positives = 132/161 (81%)
Frame = -3 / +1
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 268 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 447
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSG 869
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+QARNNARVL+SG
Sbjct: 448 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISG 627
Query: 868 SLDLFSNRFLKSGVQKAGSKTRYERAGNEQFVTETSKWVFH 746
SLDLFSN+F KS V+K GS + ++GNEQFV+E SKWVFH
Sbjct: 628 SLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKWVFH 750
Score = 166 bits (357), Expect = 3e-040
Identities = 76/134 (56%), Positives = 88/134 (65%)
Frame = +3 / -1
Query: 744 SWKTHLLVSVTNCSFPALSYLVLLPAF*TPDFRNRLLKRSSDPDSSTRALFLACITETSD 923
SWKTHLL S TNCS P + LP F T D +N LL +S DP+ TRALFLAC T+T +
Sbjct: 752 SWKTHLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKE 573
Query: 924 IADPVSDGGNDNLVFGLAEYADGEADRTFRTKLFDGLAVCPIPRNNTGASIFLDPSMTSD 1103
I DP+S GG D G AEYA+GEAD TF T+LF G IPR +TGAS F P +T +
Sbjct: 572 IEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLE 393
Query: 1104 *IRSSPTIKV*SPS 1145
I SS TIKV*S S
Sbjct: 392 SITSSLTIKV*SLS 351
Score = 76.2 bits (160), Expect(2) = 8e-024
Identities = 38/106 (35%), Positives = 58/106 (54%)
Frame = +2 / -3
Query: 944 WRQR*LSLWVS*VC*WRGR*DFQNQTV*WISRVSNSTK*YRSLNLFRPQYDI*LNKIITN 1123
WR R*+S + VC R* FQ+Q V I R+SN ++ + SL LF Q ++ ++ I+T+
Sbjct: 552 WRTR*ISFGICRVCRR*SR*HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTH 373
Query: 1124 NQGVIAFNIHSGIXXVVNNHXXWILIKINPTLCRNXXXSTXXGXXS 1261
NQ +I + + I V+NN + IKINP + + G S
Sbjct: 372 NQSMITVSFRNSIASVINNQSTQVFIKINPAVSSDITNEIRAGSVS 235
Score = 55.1 bits (114), Expect(2) = 8e-024
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +2 / -3
Query: 746 MEDPFACLCHKLLISSSLVSRFATSLLNTRLQEPVAKKIK*SR*QHPSIISCLHNRNQ 919
ME+P A HKLLI++ + L N ++ VAK IK SR ++PSIISCLHN +Q
Sbjct: 750 MENPLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 577
>gb|CF395791.1|CF395791 RTDS2_17_D04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_D04_A021 5', mRNA sequence
Length = 757
Score = 265 bits (574), Expect = 3e-070
Identities = 112/158 (70%), Positives = 129/158 (81%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 284 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 463
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSG 869
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+QARNNARVL+SG
Sbjct: 464 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISG 643
Query: 868 SLDLFSNRFLKSGVQKAGSKTRYERAGNEQFVTETSKW 755
SLDLFSN+F KS V+K GS + ++GNEQFV+E SKW
Sbjct: 644 SLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKW 757
Score = 155 bits (332), Expect = 8e-037
Identities = 72/130 (55%), Positives = 84/130 (64%)
Frame = +3 / -2
Query: 756 HLLVSVTNCSFPALSYLVLLPAF*TPDFRNRLLKRSSDPDSSTRALFLACITETSDIADP 935
HLL S TNCS P + LP F T D +N LL +S DP+ TRALFLAC T+T +I DP
Sbjct: 756 HLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDP 577
Query: 936 VSDGGNDNLVFGLAEYADGEADRTFRTKLFDGLAVCPIPRNNTGASIFLDPSMTSD*IRS 1115
+S GG D G AEYA+GEAD TF T+LF G IPR +TGAS F P +T + I S
Sbjct: 576 ISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESITS 397
Query: 1116 SPTIKV*SPS 1145
S TIKV*S S
Sbjct: 396 SLTIKV*SLS 367
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 38/106 (35%), Positives = 58/106 (54%)
Frame = +2 / -1
Query: 944 WRQR*LSLWVS*VC*WRGR*DFQNQTV*WISRVSNSTK*YRSLNLFRPQYDI*LNKIITN 1123
WR R*+S + VC R* FQ+Q V I R+SN ++ + SL LF Q ++ ++ I+T+
Sbjct: 568 WRTR*ISFGICRVCRR*SR*HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTH 389
Query: 1124 NQGVIAFNIHSGIXXVVNNHXXWILIKINPTLCRNXXXSTXXGXXS 1261
NQ +I + + I V+NN + IKINP + + G S
Sbjct: 388 NQSMITVSFRNSIASVINNQSTQVFIKINPAVSSDITNEIRAGSVS 251
Score = 50.1 bits (103), Expect(2) = 3e-022
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +2 / -1
Query: 755 PFACLCHKLLISSSLVSRFATSLLNTRLQEPVAKKIK*SR*QHPSIISCLHNRNQ 919
P A HKLLI++ + L N ++ VAK IK SR ++PSIISCLHN +Q
Sbjct: 757 PLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 593
>gb|CF472877.1|CF472877 RTDS1_12_A06.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A06_A015 3', mRNA sequence
Length = 632
Score = 256 bits (554), Expect = 2e-067
Identities = 98/128 (76%), Positives = 112/128 (87%)
Frame = -3 / +2
Query: 676 YRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPD 497
YRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPD
Sbjct: 2 YRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPD 181
Query: 496 VYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFS 317
VYGVFQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF
Sbjct: 182 VYGVFQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFG 361
Query: 316 LVYLYHK* 293
L +LYHK*
Sbjct: 362 LFFLYHK* 385
Score = 174 bits (375), Expect = 1e-042
Identities = 82/130 (63%), Positives = 96/130 (73%)
Frame = +3 / -3
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L Y
Sbjct: 390 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 211
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 210 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 31
Query: 648 EYSRSSLMRY 677
EYSR S++RY
Sbjct: 30 EYSR*SVIRY 1
Score = 136 bits (291), Expect = 4e-031
Identities = 56/128 (43%), Positives = 88/128 (68%)
Frame = +2 / -2
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 385 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 206
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRV 652
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N V
Sbjct: 205 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 26
Query: 653 FQVIVNAV 676
FQVI +++
Sbjct: 25 FQVISDSI 2
>gb|CF472832.1|CF472832 RTDS1_12_A05.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A05_A015 3', mRNA sequence
Length = 629
Score = 253 bits (547), Expect = 2e-066
Identities = 97/127 (76%), Positives = 111/127 (87%)
Frame = -3 / +1
Query: 673 RINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDV 494
RI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPDV
Sbjct: 1 RITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDV 180
Query: 493 YGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFSL 314
YGVFQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF L
Sbjct: 181 YGVFQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGL 360
Query: 313 VYLYHK* 293
+LYHK*
Sbjct: 361 FFLYHK* 381
Score = 169 bits (363), Expect = 4e-041
Identities = 80/128 (62%), Positives = 94/128 (73%)
Frame = +3 / -1
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L Y
Sbjct: 386 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 207
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 206 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 27
Query: 648 EYSRSSLM 671
EYSR S++
Sbjct: 26 EYSR*SVI 3
Score = 134 bits (288), Expect = 1e-030
Identities = 56/124 (45%), Positives = 85/124 (68%)
Frame = +2 / -3
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 381 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 202
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRV 652
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N V
Sbjct: 201 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 22
Query: 653 FQVI 664
FQVI
Sbjct: 21 FQVI 10
>gb|BM134211.1|BM134211 NXLV_018_B02_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_018_B02 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 609
Score = 249 bits (538), Expect = 3e-065
Identities = 95/124 (76%), Positives = 109/124 (87%)
Frame = -3 / +3
Query: 664 DDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGV 485
D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGV
Sbjct: 21 DHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGV 200
Query: 484 FQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFSLVYL 305
FQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF L +L
Sbjct: 201 FQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFL 380
Query: 304 YHK* 293
YHK*
Sbjct: 381 YHK* 392
Score = 169 bits (363), Expect = 4e-041
Identities = 81/131 (61%), Positives = 94/131 (71%)
Frame = +3 / -3
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L Y
Sbjct: 397 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 218
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 217 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 38
Query: 648 EYSRSSLMRYM 680
EYSR S+ M
Sbjct: 37 EYSR*SVPAIM 5
Score = 134 bits (288), Expect = 1e-030
Identities = 56/124 (45%), Positives = 85/124 (68%)
Frame = +2 / -2
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 392 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 213
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRV 652
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N V
Sbjct: 212 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 33
Query: 653 FQVI 664
FQVI
Sbjct: 32 FQVI 21
>gb|CF475415.1|CF475415 RTWW2_12_A06.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_A06_A021 3', mRNA sequence
Length = 679
Score = 245 bits (529), Expect = 6e-064
Identities = 93/121 (76%), Positives = 107/121 (88%)
Frame = -3 / +1
Query: 655 EYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQF 476
EYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGVFQF
Sbjct: 1 EYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQF 180
Query: 475 KVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFSLVYLYHK 296
K+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF L +LYHK
Sbjct: 181 KIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK 360
Query: 295 * 293
*
Sbjct: 361 * 363
Score = 164 bits (352), Expect = 1e-039
Identities = 77/122 (63%), Positives = 89/122 (72%)
Frame = +3 / -3
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L Y
Sbjct: 368 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 189
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 188 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 9
Query: 648 EY 653
EY
Sbjct: 8 EY 3
Score = 128 bits (275), Expect = 6e-029
Identities = 53/121 (43%), Positives = 82/121 (67%)
Frame = +2 / -2
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 363 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 184
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRV 652
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N V
Sbjct: 183 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 4
Query: 653 F 655
F
Sbjct: 3 F 1
>gb|CF399777.1|CF399777 RTWW1_1_D05.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_1_D05_A015 3', mRNA sequence
Length = 677
Score = 237 bits (513), Expect = 9e-062
Identities = 90/118 (76%), Positives = 104/118 (88%)
Frame = -3 / +2
Query: 646 VEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVE 467
VEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGVFQFK+E
Sbjct: 2 VEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIE 181
Query: 466 YQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFSLVYLYHK* 293
YQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF L +LYHK*
Sbjct: 182 YQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 355
Score = 158 bits (340), Expect = 7e-038
Identities = 75/120 (62%), Positives = 87/120 (72%)
Frame = +3 / -3
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L Y
Sbjct: 360 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 181
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*IST 647
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 180 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 1
Score = 125 bits (267), Expect = 8e-028
Identities = 51/118 (43%), Positives = 80/118 (67%)
Frame = +2 / -2
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 355 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 176
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLN 646
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N
Sbjct: 175 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFN 2
>gb|BF609050.1|BF609050 NXSI_039_G11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_039_G11 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 384
Score = 235 bits (507), Expect = 6e-061
Identities = 91/126 (72%), Positives = 105/126 (83%)
Frame = -3 / +3
Query: 715 KHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSND 536
+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S+D
Sbjct: 3 QHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHD 182
Query: 535 NKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYT 356
N GLYS SF+VPDVYGVFQFK+EYQR+GYT LS +KQIPV + NEYE I +AYPYY
Sbjct: 183 NNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIPVXXFXXNEYEXXIKAAYPYYG 362
Query: 355 ASFSTM 338
+FS M
Sbjct: 363 XAFSMM 380
Score = 167 bits (360), Expect = 1e-040
Identities = 80/125 (64%), Positives = 92/125 (73%)
Frame = +3 / -3
Query: 339 IVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWYSTLNWKTP*TSGTLKDV 518
I+EN *YG A +M LSYSL TGIC ++++ V P+L YS LNWKTP*TSGT +
Sbjct: 379 IMENAXP*YG*AALMXLSYSLXXKXXTGICLLRERLV*PTL*YSILNWKTP*TSGTWNET 200
Query: 519 EYKPLLSFDIVFRT*GLIMKNWSCTSSATYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVS 698
EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*ISTEYSR S++RY+ GS VS
Sbjct: 199 EYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVS 20
Query: 699 PTLWC 713
PTL C
Sbjct: 19 PTLRC 5
Score = 130 bits (279), Expect = 2e-029
Identities = 55/126 (43%), Positives = 82/126 (65%)
Frame = +2 / -2
Query: 338 HR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLNFELENSVDIRNFEGC 517
H K S++W+ I V + NLL +R+T ++ PL+LNF+LEN++++RN E
Sbjct: 380 HHGKCXSIIWIGSFNXXFIFVXXEXXYRNLLAQRETCVTNPLILNFKLENTINVRNLERN 201
Query: 518 *V*TLVVIRHSFQNIRTHHEKLELHIISNIWLPACSRPFIDLNRVFQVIVNAVHAWFIGL 697
+*+++V+ QNIRTHH KL LH+I N+ LP S PFI+ N VFQVI +++H+ F L
Sbjct: 200 RI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGVFQVISDSIHSRFKSL 21
Query: 698 PNLVVL 715
PN +L
Sbjct: 20 PNFTML 3
>gb|CF475079.1|CF475079 RTWW2_5_G11.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_5_G11_A021 5', mRNA sequence
Length = 783
Score = 233 bits (504), Expect = 2e-060
Identities = 101/145 (69%), Positives = 115/145 (79%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 332 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 511
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSG 869
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+QARNNARVL+SG
Sbjct: 512 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISG 691
Query: 868 SLDLFSNRFLKSGVQKAGSKTRYER 794
SLDLFSN+F KS K GS + +
Sbjct: 692 SLDLFSNKFFKSPG*KFGSSVEHAK 766
Score = 137 bits (293), Expect = 2e-031
Identities = 63/111 (56%), Positives = 74/111 (66%)
Frame = +3 / -1
Query: 813 LPAF*TPDFRNRLLKRSSDPDSSTRALFLACITETSDIADPVSDGGNDNLVFGLAEYADG 992
LP F* D +N LL +S DP+ TRALFLAC T+T +I DP+S GG D G AEYA+G
Sbjct: 747 LPNF*PGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEG 568
Query: 993 EADRTFRTKLFDGLAVCPIPRNNTGASIFLDPSMTSD*IRSSPTIKV*SPS 1145
EAD TF T+LF G IPR +TGAS F P +T + I SS TIKV*S S
Sbjct: 567 EADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESITSSLTIKV*SLS 415
>gb|DR694395.1|DR694395 EST1084487 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEB89 3' end, mRNA sequence
Length = 850
Score = 229 bits (494), Expect = 4e-059
Identities = 99/138 (71%), Positives = 112/138 (81%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EA VLFRG
Sbjct: 419 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEALVLFRG 598
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSG 869
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+ ARNNARVL+SG
Sbjct: 599 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVHARNNARVLISG 778
Query: 868 SLDLFSNRFLKSGVQKAG 815
SLDLFSN+F KS V+K G
Sbjct: 779 SLDLFSNKFFKSPVKKFG 832
Score = 132 bits (282), Expect = 7e-030
Identities = 61/110 (55%), Positives = 72/110 (65%)
Frame = +3 / -2
Query: 816 PAF*TPDFRNRLLKRSSDPDSSTRALFLACITETSDIADPVSDGGNDNLVFGLAEYADGE 995
P F T D +N LL +S DP+ TRALFLAC T+T +I DP+S GG D G AEYA+GE
Sbjct: 831 PNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEGE 652
Query: 996 ADRTFRTKLFDGLAVCPIPRNNTGASIFLDPSMTSD*IRSSPTIKV*SPS 1145
AD TF T+LF G IPR +T AS F P +T + I SS TIKV*S S
Sbjct: 651 ADSTFSTRLFAGFKE*AIPRKSTRASSFFSPKITLESITSSLTIKV*SLS 502
>gb|CX649743.1|CX649743 COLD1_41_E09.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_E09_A029 3', mRNA sequence
Length = 805
Score = 222 bits (480), Expect = 3e-057
Identities = 95/127 (74%), Positives = 106/127 (83%)
Frame = -3 / -2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 381 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 202
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSG 869
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+QARNNARVL+SG
Sbjct: 201 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISG 22
Query: 868 SLDLFSN 848
SLDLFSN
Sbjct: 21 SLDLFSN 1
Score = 125 bits (268), Expect = 6e-028
Identities = 57/99 (57%), Positives = 67/99 (67%)
Frame = +3 / +2
Query: 849 LLKRSSDPDSSTRALFLACITETSDIADPVSDGGNDNLVFGLAEYADGEADRTFRTKLFD 1028
LL +S DP+ TRALFLAC T+T +I DP+S GG D G AEYA+GEAD TF T+LF
Sbjct: 2 LLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFA 181
Query: 1029 GLAVCPIPRNNTGASIFLDPSMTSD*IRSSPTIKV*SPS 1145
G IPR +TGAS F P +T + I SS TIKV*S S
Sbjct: 182 GFKE*AIPRKSTGASSFFSPKITLESITSSLTIKV*SLS 298
>gb|DT638624.1|DT638624 EST1153555 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHH42 3' end, mRNA sequence
Length = 860
Score = 176 bits (378), Expect(2) = 6e-056
Identities = 74/104 (71%), Positives = 83/104 (79%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 428 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 607
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISL 917
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISL
Sbjct: 608 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISL 739
Score = 91.8 bits (194), Expect(2) = 2e-026
Identities = 44/84 (52%), Positives = 51/84 (60%)
Frame = +3 / -3
Query: 894 FLACITETSDIADPVSDGGNDNLVFGLAEYADGEADRTFRTKLFDGLAVCPIPRNNTGAS 1073
FL +I DP+S GG D G AEYA+GEAD TF T+LF G IPR +TGAS
Sbjct: 762 FLPAQLTPKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGAS 583
Query: 1074 IFLDPSMTSD*IRSSPTIKV*SPS 1145
F P +T + I SS TIKV*S S
Sbjct: 582 SFFSPKITLESITSSLTIKV*SLS 511
Score = 62.9 bits (131), Expect(2) = 6e-056
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -3 / +3
Query: 916 VSVMQARNNARVLLSGSLDLFSNRFLKSGVQKAG 815
VSV+QARNNARVL+SGSLDLFSN+F KS V+K G
Sbjct: 741 VSVVQARNNARVLISGSLDLFSNKFFKSPVKKFG 842
Score = 48.3 bits (99), Expect(2) = 2e-026
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +3 / -2
Query: 816 PAF*TPDFRNRLLKRSSDPDSSTRALFLACITET 917
P F T D +N LL +S DP+ TRALFLAC T+T
Sbjct: 841 PNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDT 740
>gb|CF475000.1|CF475000 RTWW2_5_G11.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_5_G11_A021 3', mRNA sequence
Length = 617
Score = 201 bits (434), Expect = 7e-051
Identities = 78/102 (76%), Positives = 90/102 (88%)
Frame = -3 / +3
Query: 598 DDVQLQFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIP 419
DDVQ+QF+MMSPYVLKT+S+DN GLYS SF+VPDVYGVFQFK+EYQR+GYT LS +KQIP
Sbjct: 3 DDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIP 182
Query: 418 VRPYRHNEYERFITSAYPYYTASFSTMCAFFIFSLVYLYHK* 293
VRP+RHNEYERFI +AYPYY +FS M FFIF L +LYHK*
Sbjct: 183 VRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 308
Score = 138 bits (297), Expect = 6e-032
Identities = 64/104 (61%), Positives = 76/104 (73%)
Frame = +3 / -2
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDKPVYPSLWY 467
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC ++++ V P+L Y
Sbjct: 313 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 134
Query: 468 STLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKNWSCTSS 599
S LNWKTP*TSGT + EY PLLS D VFRT*GLIM N +CTSS
Sbjct: 133 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSS 2
Score = 106 bits (226), Expect = 4e-022
Identities = 43/102 (42%), Positives = 70/102 (68%)
Frame = +2 / -1
Query: 293 LFVVQVHKREYEESTHR*K*GSVVWVR*CYEPLILVMPVRAHWNLLCKRQTSISQPLVLN 472
LF++ + + +E+ H K S++W+ EP I V+P R + NLL +R+T ++ PL+LN
Sbjct: 308 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 129
Query: 473 FELENSVDIRNFEGC*V*TLVVIRHSFQNIRTHHEKLELHII 598
F+LEN++++RN E +*+++V+ QNIRTHH KL LH+I
Sbjct: 128 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVI 3
>gb|CF472897.1|CF472897 RTDS1_12_A05.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A05_A015 5', mRNA sequence
Length = 772
Score = 184 bits (396), Expect = 1e-045
Identities = 78/109 (71%), Positives = 88/109 (80%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 446 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 625
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVMQ 902
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+Q
Sbjct: 626 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVVQ 772
>gb|CF472908.1|CF472908 RTDS1_12_A06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A06_A015 5', mRNA sequence
Length = 769
Score = 182 bits (391), Expect = 6e-045
Identities = 77/108 (71%), Positives = 87/108 (80%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 446 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 625
Query: 1048 IGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVM 905
I H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+
Sbjct: 626 IAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVV 769
>gb|BX784112.1|BX784112 BX784112 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 129C08, mRNA sequence
Length = 631
Score = 107 bits (228), Expect(2) = 2e-044
Identities = 41/49 (83%), Positives = 47/49 (95%)
Frame = -3 / +3
Query: 583 QFFMMSPYVLKTMSNDNKGLYSTSFKVPDVYGVFQFKVEYQRLGYTGLS 437
QF+MMSPYVLKT+S+DNKGLYS SF+VPDVYGVFQFK+EYQR+GYT LS
Sbjct: 3 QFYMMSPYVLKTLSHDNKGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLS 149
Score = 93.2 bits (197), Expect(2) = 2e-044
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = -3 / +1
Query: 448 TGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFSLVYLYHK* 293
T +S +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF L +LYHK*
Sbjct: 136 TQVSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 291
Score = 72.5 bits (152), Expect(2) = 2e-024
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +3 / -1
Query: 438 DKPVYPSLWYSTLNWKTP*TSGTLKDVEYKPLLSFDIVFRT*GLIMKN 581
++ V P+L YS LNWKTP*TSGT + EY PLLS D VFRT*GLIM N
Sbjct: 148 ERLV*PTL*YSILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*N 5
Score = 60.6 bits (126), Expect(2) = 2e-024
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +3 / -3
Query: 288 VLYLWYRYTSENMKKAHIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKD 440
+LYL Y+ +KK I+EN *YG A +MNLSYSLCL G TGIC +++
Sbjct: 296 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRE 144
>gb|DT634670.1|DT634670 EST1149601 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG854 3' end, mRNA sequence
Length = 811
Score = 103 bits (220), Expect(4) = 8e-041
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -3 / +2
Query: 994 SPSAYSANPKTKLSLPPSLTGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQ 824
SPSAYSANPK LS PP+L GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+
Sbjct: 635 SPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVK 805
Score = 51.0 bits (105), Expect(4) = 8e-041
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -3 / +2
Query: 1183 MVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKK 1076
+VIDH YA + DHTLIV DD+I S VI G +K
Sbjct: 443 LVIDHTSYAVSKTDSDHTLIVSDDVIDSKVIFGREK 550
Score = 40.0 bits (81), Expect(4) = 8e-041
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -3 / +1
Query: 1081 KKIEAPVLFRGIGHTANPSNSLVLKVLSA 995
K P GI H+ NP+NSLVLKVLSA
Sbjct: 547 KSSRLPCFSEGIAHSLNPANSLVLKVLSA 633
Score = 29.5 bits (58), Expect(4) = 8e-041
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 1228 IATECGVDFDED 1193
IA +CGVDFDED
Sbjct: 397 IAADCGVDFDED 432
>gb|DR685422.1|DR685422 EST1075499 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB366 3' end, mRNA sequence
Length = 530
Score = 92.3 bits (195), Expect(2) = 5e-037
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +2
Query: 1066 PVLFRGIGHTANPSNSLVLKVLSASPSAYSANPKTKLSLPPSLTGSAISLVSVM 905
P RGI H+ NP+NSLVLKVLSASPSAYSANPK LS PP+L GS+ISLVSV+
Sbjct: 368 PCFSRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVV 529
Score = 83.5 bits (176), Expect(2) = 5e-037
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -3 / +3
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLF 1055
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+E F
Sbjct: 204 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEGSRAF 377
>gb|AW010860.1|AW010860 ST12C08 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST12C08, mRNA sequence
Length = 492
Score = 114 bits (243), Expect(2) = 8e-030
Identities = 45/69 (65%), Positives = 52/69 (75%)
Frame = -3 / +2
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 191 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 370
Query: 1048 IGHTANPSN 1022
I H+ NP+N
Sbjct: 371 IAHSLNPAN 397
Score = 37.3 bits (75), Expect(2) = 8e-030
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -3 / +3
Query: 1021 SLVLKVLSASPSAYSANPKTKLSLPP 944
SLVLKVLSASPSAYSA ++ L P
Sbjct: 399 SLVLKVLSASPSAYSAKSQS*SXLVP 476
>gb|BM493698.1|BM493698 NXLV_069_D04_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_069_D04 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 511
Score = 130 bits (279), Expect = 2e-029
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = -3 / +3
Query: 496 VYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMCAFFIFS 317
VYGVFQFK+EYQR+GYT L +KQIPVRP+RHNEYERFI +AYPYY +FS M FFIF
Sbjct: 18 VYGVFQFKIEYQRVGYTSLPLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFG 197
Query: 316 LVYLYHK* 293
L +LYHK*
Sbjct: 198 LFFLYHK* 221
>gb|CO198652.1|CO198652 GEO1_15_A02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_15_A02_A029 5', mRNA sequence
Length = 596
Score = 105 bits (224), Expect = 7e-022
Identities = 42/64 (65%), Positives = 48/64 (75%)
Frame = -3 / +1
Query: 1228 IATECGVDFDEDPXXMVIDHXXYAAMDVEGDHTLIVGDDLIQSDVILGSKKIEAPVLFRG 1049
IA +CGVDFDED +VIDH YA + DHTLIV DD+I S VILG KK+EAPVLFRG
Sbjct: 307 IAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFRG 486
Query: 1048 IGHT 1037
I H+
Sbjct: 487 IAHS 498
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 670,934,914
Number of Sequences: 355925
Number of extensions: 10038967
Number of successful extensions: 41741
Number of sequences better than 1.0e-020: 34
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 19473320970
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)