TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.249
(684 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR099919.1|DR099919 STRR1_60_B10.b1_A033 Stem Response R... 247 8e-065
gb|DR099974.1|DR099974 STRR1_60_B10.g1_A033 Stem Response R... 247 8e-065
gb|DR684773.1|DR684773 EST1074850 Normalized pine embryo li... 246 1e-064
gb|DR693416.1|DR693416 EST1083504 Normalized pine embryo li... 246 1e-064
gb|CX714210.1|CX714210 RTPQ1_19_E04.b1_A032 Roots treated w... 246 1e-064
gb|CX714242.1|CX714242 RTPQ1_19_E04.g1_A032 Roots treated w... 246 1e-064
gb|DR693095.1|DR693095 EST1083183 Normalized pine embryo li... 246 1e-064
gb|DT637956.1|DT637956 EST1152887 Normalized pine embryo li... 246 1e-064
gb|DT635691.1|DT635691 EST1150622 Normalized pine embryo li... 244 5e-064
gb|DR692855.1|DR692855 EST1082943 Normalized pine embryo li... 243 1e-063
gb|DR689549.1|DR689549 EST1079635 Normalized pine embryo li... 243 1e-063
gb|DR015187.1|DR015187 STRS1_2_B02.b1_A034 Shoot tip pitch ... 241 3e-063
gb|BQ634682.1|BQ634682 NXRV072_A03_F NXRV (Nsf Xylem Root w... 241 5e-063
gb|CF665710.1|CF665710 RTCNT1_18_A07.b1_A029 Root control P... 241 5e-063
gb|CO169069.1|CO169069 NDL1_4_B04.g1_A029 Needles control P... 241 5e-063
gb|CO370232.1|CO370232 RTK1_66_B04.g1_A029 Roots minus pota... 241 5e-063
gb|DR015267.1|DR015267 STRS1_2_B02.g1_A034 Shoot tip pitch ... 241 5e-063
gb|BX249163.1|BX249163 BX249163 Pinus pinaster differenciat... 240 7e-063
gb|BX252786.1|BX252786 BX252786 Pinus pinaster differenciat... 240 7e-063
gb|DR080765.1|DR080765 RTFEPL1_25_C06.b1_A029 Roots plus ad... 240 9e-063
gb|DR080835.1|DR080835 RTFEPL1_25_C06.g1_A029 Roots plus ad... 240 9e-063
gb|DR116993.1|DR116993 RTMG1_4_C06.b1_A029 Roots minus magn... 240 9e-063
gb|DR681963.1|DR681963 EST1072038 Normalized pine embryo li... 239 1e-062
gb|DT630885.1|DT630885 EST1145816 Normalized pine embryo li... 239 1e-062
gb|BE452000.1|BE452000 NXCI_007_C04_F NXCI (Nsf Xylem Compr... 238 3e-062
gb|DR024769.1|DR024769 STRS1_67_H05.b1_A034 Shoot tip pitch... 238 3e-062
gb|DR687593.1|DR687593 EST1077675 Normalized pine embryo li... 238 3e-062
gb|DT634041.1|DT634041 EST1148972 Normalized pine embryo li... 238 3e-062
gb|BI202865.1|BI202865 NXPV_091_E02_F NXPV (Nsf Xylem Plani... 235 3e-061
gb|BM427882.1|BM427882 NXRV_005_F01_F NXRV (Nsf Xylem Root ... 234 4e-061
gb|BQ701178.1|BQ701178 NXSI_023_E02_F NXSI (Nsf Xylem Side ... 234 4e-061
gb|BF517750.1|BF517750 NXSI_029_G09_F NXSI (Nsf Xylem Side ... 230 1e-059
gb|CD028507.1|CD028507 NXSI_119_G07_F NXSI (Nsf Xylem Side ... 228 3e-059
gb|CO159572.1|CO159572 FLD1_14_A02.g1_A029 Root flooded Pin... 227 7e-059
gb|BE209160.1|BE209160 NXNV_164_F09_F Nsf Xylem Normal wood... 224 4e-058
gb|BX680008.1|BX680008 BX680008 RS Pinus pinaster cDNA clon... 217 5e-058
gb|DR078228.1|DR078228 RTFEPL1_2_F05.g1_A029 Roots plus add... 221 6e-057
gb|DR387158.1|DR387158 RTHG1_19_G09.g1_A029 Roots plus adde... 221 6e-057
gb|DR081229.1|DR081229 RTFEPL1_28_F08.b1_A029 Roots plus ad... 220 1e-056
gb|BF777460.1|BF777460 NXSI_071_H02_F NXSI (Nsf Xylem Side ... 219 2e-056
gb|DR387087.1|DR387087 RTHG1_19_G09.b1_A029 Roots plus adde... 215 3e-055
gb|BF778525.1|BF778525 NXSI_085_G03_F NXSI (Nsf Xylem Side ... 213 1e-054
gb|BX254505.1|BX254505 BX254505 Pinus pinaster differenciat... 209 2e-053
gb|BF777931.1|BF777931 NXSI_079_A05_F NXSI (Nsf Xylem Side ... 204 4e-052
gb|BQ697198.1|BQ697198 NXPV_050_F10_F NXPV (Nsf Xylem Plani... 204 4e-052
gb|BQ697618.1|BQ697618 NXPV_058_G06_F NXPV (Nsf Xylem Plani... 204 5e-052
gb|DR081312.1|DR081312 RTFEPL1_28_F08.g1_A029 Roots plus ad... 200 7e-051
gb|CO159491.1|CO159491 FLD1_14_A02.b1_A029 Root flooded Pin... 198 3e-050
gb|BF777300.1|BF777300 NXSI_067_E07_F NXSI (Nsf Xylem Side ... 193 8e-049
gb|BG317490.1|BG317490 NXPV_002_D10_F NXPV (Nsf Xylem Plani... 191 4e-048
gb|BG040829.1|BG040829 NXSI_115_F01_F NXSI (Nsf Xylem Side ... 185 3e-046
gb|DT637619.1|DT637619 EST1152550 Normalized pine embryo li... 150 6e-046
gb|DR692925.1|DR692925 EST1083013 Normalized pine embryo li... 149 8e-046
gb|BQ291219.1|BQ291219 NXRV057_D08_F NXRV (Nsf Xylem Root w... 183 8e-046
gb|DR689603.1|DR689603 EST1079689 Normalized pine embryo li... 181 4e-045
gb|BQ699400.1|BQ699400 NXRV127_D01_F NXRV (Nsf Xylem Root w... 100 2e-041
gb|AW755006.1|AW755006 PC09E04 Pine TriplEx pollen cone lib... 163 1e-039
gb|BX678446.1|BX678446 BX678446 RS Pinus pinaster cDNA clon... 120 5e-036
gb|DR688731.1|DR688731 EST1078816 Normalized pine embryo li... 121 1e-032
gb|CO366825.1|CO366825 RTK1_30_H02.b1_A029 Roots minus pota... 121 1e-032
gb|DR684189.1|DR684189 EST1074266 Normalized pine embryo li... 121 1e-032
gb|DR693720.1|DR693720 EST1083810 Normalized pine embryo li... 121 1e-032
gb|CO366902.1|CO366902 RTK1_30_H02.g1_A029 Roots minus pota... 121 1e-032
gb|CX652496.1|CX652496 COLD1_59_A12.g1_A029 Root cold Pinus... 121 1e-032
gb|DR120495.1|DR120495 RTMG1_30_C12.b1_A029 Roots minus mag... 119 4e-032
gb|DR689284.1|DR689284 EST1079370 Normalized pine embryo li... 119 5e-032
gb|DR119465.1|DR119465 RTMG1_23_A05.g1_A029 Roots minus mag... 121 5e-032
gb|CF474235.1|CF474235 RTWW2_17_A03.g1_A021 Well-watered lo... 133 2e-030
gb|CO366873.1|CO366873 RTK1_30_E06.g1_A029 Roots minus pota... 133 2e-030
gb|CV036477.1|CV036477 RTNACL1_59_B12.g1_A029 Roots plus ad... 133 2e-030
gb|CV036651.1|CV036651 RTNACL1_60_F04.g1_A029 Roots plus ad... 133 2e-030
gb|DR011689.1|DR011689 HEAT1_7_F11.b1_A029 Root at 37 C for... 133 2e-030
gb|DR011768.1|DR011768 HEAT1_7_F11.g1_A029 Root at 37 C for... 133 2e-030
gb|DR019319.1|DR019319 STRS1_29_E04.b1_A034 Shoot tip pitch... 133 2e-030
gb|DR054781.1|DR054781 RTCA1_19_C01.g1_A029 Roots minus cal... 133 2e-030
gb|DR059746.1|DR059746 RTNIT1_19_C01.g1_A029 Roots minus ni... 133 2e-030
gb|DR089772.1|DR089772 RTAL1_10_E10.g1_A029 Roots plus adde... 133 2e-030
gb|DR119693.1|DR119693 RTMG1_24_G10.g1_A029 Roots minus mag... 133 2e-030
gb|DR743961.1|DR743961 RTCU1_19_G03.b1_A029 Roots plus adde... 133 2e-030
gb|CF668107.1|CF668107 RTCNT1_34_A04.g1_A029 Root control P... 113 2e-030
gb|CD027369.1|CD027369 NXNV046A05 Nsf Xylem Normal wood Ver... 121 2e-030
gb|DR094669.1|DR094669 STRR1_16_B04.b1_A033 Stem Response R... 132 3e-030
gb|DR094743.1|DR094743 STRR1_16_B04.g1_A033 Stem Response R... 132 3e-030
gb|CX649684.1|CX649684 COLD1_36_G06.g1_A029 Root cold Pinus... 131 4e-030
gb|DR020199.1|DR020199 STRS1_35_G03.b1_A034 Shoot tip pitch... 130 8e-030
gb|DR120575.1|DR120575 RTMG1_30_C12.g1_A029 Roots minus mag... 111 1e-029
gb|CF670782.1|CF670782 RTCNT1_52_B12.g1_A029 Root control P... 130 1e-029
gb|BQ633910.1|BQ633910 NXRV062_D01_F NXRV (Nsf Xylem Root w... 129 2e-029
gb|CO366800.1|CO366800 RTK1_30_E06.b1_A029 Roots minus pota... 128 3e-029
gb|CF671366.1|CF671366 RTCNT1_56_D01.g1_A029 Root control P... 124 5e-028
gb|BX251663.1|BX251663 BX251663 Pinus pinaster differenciat... 123 1e-027
gb|CV036580.1|CV036580 RTNACL1_60_F04.b1_A029 Roots plus ad... 122 3e-027
gb|CX645400.1|CX645400 COLD1_2_B07.g1_A029 Root cold Pinus ... 122 3e-027
gb|AW290709.1|AW290709 NXNV046A05F Nsf Xylem Normal wood Ve... 121 7e-027
gb|DR019591.1|DR019591 STRS1_31_C08.b1_A034 Shoot tip pitch... 115 3e-025
gb|AW495779.1|AW495779 NXNV_065_C10_FF Nsf Xylem Normal woo... 114 6e-025
gb|CD027737.1|CD027737 NXNV_065_C10_F Nsf Xylem Normal wood... 114 6e-025
gb|CF665787.1|CF665787 RTCNT1_18_A07.g1_A029 Root control P... 110 1e-023
gb|BQ107699.1|BQ107699 NXLV103_C05_F NXLV (Nsf Xylem Late w... 100 1e-020
gb|DR694156.1|DR694156 EST1084246 Normalized pine embryo li... 97 1e-019
gb|BF778171.1|BF778171 NXSI_080_A01_F NXSI (Nsf Xylem Side ... 95 3e-019
gb|CF399489.1|CF399489 RTDS3_26_F04.b1_A022 Drought-stresse... 94 9e-019
gb|BM492433.1|BM492433 NXRV_025_C11_F NXRV (Nsf Xylem Root ... 92 3e-018
gb|BQ700460.1|BQ700460 NXRV105_H12_F NXRV (Nsf Xylem Root w... 92 3e-018
gb|AW758904.1|AW758904 NXNV_094_D06_F Nsf Xylem Normal wood... 90 1e-017
gb|DR102773.1|DR102773 STRR1_83_F05.g1_A033 Stem Response R... 90 1e-017
gb|BF777925.1|BF777925 NXSI_078_H08_F NXSI (Nsf Xylem Side ... 89 4e-017
gb|CD020774.1|CD020774 NXNV_075_G03_F Nsf Xylem Normal wood... 86 3e-016
gb|DR162242.1|DR162242 RTFE1_16_D02.g1_A029 Roots minus iro... 84 1e-015
gb|CO160016.1|CO160016 FLD1_17_E05.g1_A029 Root flooded Pin... 83 2e-015
gb|DR098767.1|DR098767 STRR1_47_F01.g1_A033 Stem Response R... 79 2e-015
gb|BE241325.1|BE241325 NXNV_185_H01_F Nsf Xylem Normal wood... 82 3e-015
gb|DR161803.1|DR161803 RTFE1_14_B07.b1_A029 Roots minus iro... 82 3e-015
gb|DR161888.1|DR161888 RTFE1_14_B07.g1_A029 Roots minus iro... 82 3e-015
gb|CV036403.1|CV036403 RTNACL1_59_B12.b1_A029 Roots plus ad... 81 7e-015
gb|CD025023.1|CD025023 NXSI_004_G12_F NXSI (Nsf Xylem Side ... 81 9e-015
gb|DR089687.1|DR089687 RTAL1_10_E10.b1_A029 Roots plus adde... 79 2e-014
gb|CO162594.1|CO162594 FLD1_36_G06.b1_A029 Root flooded Pin... 79 3e-014
gb|DR069237.1|DR069237 RTDK1_5_G02.g1_A029 Roots, dark Pinu... 76 3e-013
gb|DR098847.1|DR098847 STRR1_48_F10.b1_A033 Stem Response R... 76 3e-013
gb|DR164430.1|DR164430 RTFE1_48_H04.g1_A029 Roots minus iro... 76 3e-013
gb|DR057580.1|DR057580 RTNIT1_6_D05.g1_A029 Roots minus nit... 75 4e-013
gb|DR080185.1|DR080185 RTFEPL1_21_A05.b1_A029 Roots plus ad... 75 4e-013
gb|CD020409.1|CD020409 NXNV068A08 Nsf Xylem Normal wood Ver... 75 6e-013
gb|DR059027.1|DR059027 RTNIT1_15_G01.b1_A029 Roots minus ni... 73 1e-012
gb|DT628737.1|DT628737 EST1155307 Subtracted pine embryo li... 73 3e-012
gb|AA566948.1|AA566948 1002 Loblolly pine C Pinus taeda cDN... 73 3e-012
gb|BF778002.1|BF778002 NXSI_079_G09_F NXSI (Nsf Xylem Side ... 71 1e-011
gb|BE496340.1|BE496340 NXCI_019_A12_F NXCI (Nsf Xylem Compr... 70 2e-011
gb|DR742709.1|DR742709 RTCU1_6_B05.g2_A029 Roots plus added... 69 3e-011
gb|BX252025.1|BX252025 BX252025 Pinus pinaster differenciat... 68 9e-011
gb|BX254589.1|BX254589 BX254589 Pinus pinaster differenciat... 68 9e-011
gb|BE582204.1|BE582204 NXCI_026_C06_F NXCI (Nsf Xylem Compr... 68 9e-011
gb|DN613232.1|DN613232 EST966282 Subtracted pine embryo lib... 68 9e-011
gb|CF392576.1|CF392576 RTDR3_6_B11.g1_A022 Loblolly pine ro... 66 3e-010
gb|DR080257.1|DR080257 RTFEPL1_21_A05.g1_A029 Roots plus ad... 66 3e-010
gb|DR687524.1|DR687524 EST1077606 Normalized pine embryo li... 66 3e-010
gb|DR689305.1|DR689305 EST1079391 Normalized pine embryo li... 66 3e-010
gb|DR689444.1|DR689444 EST1079530 Normalized pine embryo li... 66 3e-010
gb|DR690439.1|DR690439 EST1080525 Normalized pine embryo li... 66 3e-010
gb|DT632889.1|DT632889 EST1147820 Normalized pine embryo li... 65 6e-010
gb|DR119390.1|DR119390 RTMG1_23_A05.b1_A029 Roots minus mag... 44 9e-010
gb|CV144790.1|CV144790 EST855999 Sequencing ESTs from loblo... 63 2e-009
gb|DR687885.1|DR687885 EST1077968 Normalized pine embryo li... 63 2e-009
gb|DT624715.1|DT624715 EST1159050 Sequencing ESTs from lobl... 63 2e-009
gb|BQ106809.1|BQ106809 NXLV089_F02_F NXLV (Nsf Xylem Late w... 62 3e-009
gb|CO201458.1|CO201458 RTCNT2_5_H07.g1_A029 Root control 2 ... 62 4e-009
gb|CO158724.1|CO158724 FLD1_8_G08.g1_A029 Root flooded Pinu... 62 6e-009
gb|DN614213.1|DN614213 EST967263 Subtracted pine embryo lib... 60 2e-008
gb|DR088678.1|DR088678 RTAL1_3_E10.g1_A029 Roots plus added... 58 7e-008
gb|BQ654423.1|BQ654423 NXRV080_B03_F NXRV (Nsf Xylem Root w... 57 2e-007
gb|BX677606.1|BX677606 BX677606 RN Pinus pinaster cDNA clon... 56 3e-007
gb|DN456267.1|DN456267 EST952066 Sequencing ESTs from loblo... 55 5e-007
gb|DT625319.1|DT625319 EST1159594 Sequencing ESTs from lobl... 55 5e-007
gb|CD025813.1|CD025813 NXSI_080_B08_F NXSI (Nsf Xylem Side ... 52 3e-006
gb|CD022521.1|CD022521 NXPV_058_H05_F NXPV (Nsf Xylem Plani... 51 8e-006
gb|BQ700459.1|BQ700459 NXRV105_H11_F NXRV (Nsf Xylem Root w... 50 2e-005
gb|CX645336.1|CX645336 COLD1_2_B07.b1_A029 Root cold Pinus ... 50 2e-005
gb|DR098688.1|DR098688 STRR1_47_F01.b1_A033 Stem Response R... 50 2e-005
gb|DN611322.1|DN611322 EST964372 Subtracted pine embryo lib... 50 2e-005
gb|DN611615.1|DN611615 EST964665 Subtracted pine embryo lib... 50 2e-005
gb|CD022474.1|CD022474 NXPV_056_E03_F NXPV (Nsf Xylem Plani... 49 4e-005
gb|DR013942.1|DR013942 HEAT1_22_A11.g1_A029 Root at 37 C fo... 49 4e-005
gb|BQ701432.1|BQ701432 NXSI_064_B03_F NXSI (Nsf Xylem Side ... 48 6e-005
gb|BF518246.1|BF518246 NXSI_036_G07_F NXSI (Nsf Xylem Side ... 39 2e-004
gb|BQ702085.1|BQ702085 NXSI_124_D10_F NXSI (Nsf Xylem Side ... 44 0.001
gb|DR054712.1|DR054712 RTCA1_19_C01.b1_A029 Roots minus cal... 42 0.003
gb|CF473042.1|CF473042 RTDS1_1_D01.b1_A015 Drought-stressed... 41 0.007
gb|CF473108.1|CF473108 RTDS1_1_D01.g1_A015 Drought-stressed... 41 0.007
gb|CF474657.1|CF474657 RTWW2_7_H02.b1_A021 Well-watered lob... 39 0.044
gb|CX652425.1|CX652425 COLD1_59_A12.b1_A029 Root cold Pinus... 39 0.044
gb|CF665517.1|CF665517 RTCNT1_16_B05.g1_A029 Root control P... 29 0.51
gb|CO411541.1|CO411541 EST841926 Sequencing ESTs from loblo... 34 1.1
gb|CO412261.1|CO412261 EST842646 Sequencing ESTs from loblo... 34 1.1
gb|CX649765.1|CX649765 COLD1_41_H03.b1_A029 Root cold Pinus... 34 1.1
gb|DR013562.1|DR013562 HEAT1_20_C09.b1_A029 Root at 37 C fo... 34 1.1
gb|DR013639.1|DR013639 HEAT1_20_C09.g1_A029 Root at 37 C fo... 34 1.1
gb|DR166017.1|DR166017 RTPHOS1_8_F09.g1_A029 Roots minus ph... 34 1.1
gb|DT625884.1|DT625884 EST1157808 Sequencing ESTs from lobl... 34 1.1
gb|DN615491.1|DN615491 EST968541 Subtracted pine embryo lib... 34 1.4
gb|CO164717.1|CO164717 FLD1_49_G08.g1_A029 Root flooded Pin... 33 2.0
gb|CX650657.1|CX650657 COLD1_47_E09.b1_A029 Root cold Pinus... 33 2.0
gb|DR692349.1|DR692349 EST1082437 Normalized pine embryo li... 33 2.0
gb|DT637231.1|DT637231 EST1152162 Normalized pine embryo li... 33 2.0
gb|DR109995.1|DR109995 RTS1_1_E12.b1_A029 Roots minus sulfu... 27 2.2
gb|DR109397.1|DR109397 RTS1_1_E12.g1_A029 Roots minus sulfu... 27 2.2
gb|DR071442.1|DR071442 RTDK1_19_H08.g1_A029 Roots, dark Pin... 25 2.3
gb|CO362292.1|CO362292 RTK1_2_D06.g1_A029 Roots minus potas... 29 2.6
gb|CX713112.1|CX713112 RTPQ1_7_C07.b1_A032 Roots treated wi... 33 2.7
gb|DR119695.1|DR119695 RTMG1_24_G12.g1_A029 Roots minus mag... 30 3.2
gb|CF387735.1|CF387735 RTDR1_19_H02.g1_A015 Loblolly pine r... 32 3.8
gb|CF401707.1|CF401707 RTWW1_14_G08.g1_A015 Well-watered lo... 32 3.8
gb|CF472298.1|CF472298 RTDS1_9_D09.b1_A015 Drought-stressed... 32 3.8
gb|CF669922.1|CF669922 RTCNT1_46_H11.g1_A029 Root control P... 32 3.8
gb|CN783675.1|CN783675 EST782366 Sequencing ESTs from loblo... 32 3.8
gb|CO409161.1|CO409161 EST839546 Sequencing ESTs from loblo... 32 3.8
gb|CO409238.1|CO409238 EST839623 Sequencing ESTs from loblo... 32 3.8
gb|CO409288.1|CO409288 EST839673 Sequencing ESTs from loblo... 32 3.8
gb|CO409721.1|CO409721 EST840106 Sequencing ESTs from loblo... 32 3.8
gb|CO409876.1|CO409876 EST840261 Sequencing ESTs from loblo... 32 3.8
gb|CO410010.1|CO410010 EST840395 Sequencing ESTs from loblo... 32 3.8
gb|CO410259.1|CO410259 EST840644 Sequencing ESTs from loblo... 32 3.8
gb|CO410364.1|CO410364 EST840749 Sequencing ESTs from loblo... 32 3.8
gb|CO410846.1|CO410846 EST841231 Sequencing ESTs from loblo... 32 3.8
gb|CO411307.1|CO411307 EST841692 Sequencing ESTs from loblo... 32 3.8
gb|CO412517.1|CO412517 EST842902 Sequencing ESTs from loblo... 32 3.8
gb|CO412934.1|CO412934 EST843319 Sequencing ESTs from loblo... 32 3.8
gb|CO413743.1|CO413743 EST844128 Sequencing ESTs from loblo... 32 3.8
gb|CO414220.1|CO414220 EST844605 Sequencing ESTs from loblo... 32 3.8
gb|CO363396.1|CO363396 RTK1_9_B05.g1_A029 Roots minus potas... 32 3.8
gb|CO363563.1|CO363563 RTK1_10_B05.g1_A029 Roots minus pota... 32 3.8
gb|CV134769.1|CV134769 EST845978 Sequencing ESTs from loblo... 32 3.8
gb|CV136880.1|CV136880 EST848089 Sequencing ESTs from loblo... 32 3.8
gb|CV137817.1|CV137817 EST849026 Sequencing ESTs from loblo... 32 3.8
gb|CV138341.1|CV138341 EST849550 Sequencing ESTs from loblo... 32 3.8
gb|CV138786.1|CV138786 EST849995 Sequencing ESTs from loblo... 32 3.8
gb|CV138923.1|CV138923 EST850132 Sequencing ESTs from loblo... 32 3.8
gb|CV145279.1|CV145279 EST856488 Sequencing ESTs from loblo... 32 3.8
gb|CV145623.1|CV145623 EST856832 Sequencing ESTs from loblo... 32 3.8
gb|CV146172.1|CV146172 EST857381 Sequencing ESTs from loblo... 32 3.8
gb|CV146612.1|CV146612 EST857821 Sequencing ESTs from loblo... 32 3.8
gb|CV146774.1|CV146774 EST857983 Sequencing ESTs from loblo... 32 3.8
gb|CV146811.1|CV146811 EST858020 Sequencing ESTs from loblo... 32 3.8
gb|CV147876.1|CV147876 EST859085 Sequencing ESTs from loblo... 32 3.8
gb|CV147911.1|CV147911 EST859120 Sequencing ESTs from loblo... 32 3.8
gb|CV147964.1|CV147964 EST859173 Sequencing ESTs from loblo... 32 3.8
gb|CX651907.1|CX651907 COLD1_55_D04.g1_A029 Root cold Pinus... 32 3.8
gb|DN446236.1|DN446236 EST942035 Sequencing ESTs from loblo... 32 3.8
gb|DN446368.1|DN446368 EST942167 Sequencing ESTs from loblo... 32 3.8
gb|DN446627.1|DN446627 EST942426 Sequencing ESTs from loblo... 32 3.8
gb|DN446863.1|DN446863 EST942662 Sequencing ESTs from loblo... 32 3.8
gb|DN447460.1|DN447460 EST943259 Sequencing ESTs from loblo... 32 3.8
gb|DN447570.1|DN447570 EST943369 Sequencing ESTs from loblo... 32 3.8
gb|DN449490.1|DN449490 EST945289 Sequencing ESTs from loblo... 32 3.8
gb|DN450288.1|DN450288 EST946087 Sequencing ESTs from loblo... 32 3.8
gb|DN450697.1|DN450697 EST946496 Sequencing ESTs from loblo... 32 3.8
gb|DN451323.1|DN451323 EST947122 Sequencing ESTs from loblo... 32 3.8
gb|DN452655.1|DN452655 EST948454 Sequencing ESTs from loblo... 32 3.8
gb|DN453015.1|DN453015 EST948814 Sequencing ESTs from loblo... 32 3.8
gb|DN455255.1|DN455255 EST951054 Sequencing ESTs from loblo... 32 3.8
gb|DN455593.1|DN455593 EST951392 Sequencing ESTs from loblo... 32 3.8
gb|DN456475.1|DN456475 EST952274 Sequencing ESTs from loblo... 32 3.8
gb|DN456499.1|DN456499 EST952298 Sequencing ESTs from loblo... 32 3.8
gb|DN456902.1|DN456902 EST952701 Sequencing ESTs from loblo... 32 3.8
gb|DN458208.1|DN458208 EST954007 Sequencing ESTs from loblo... 32 3.8
gb|DN459666.1|DN459666 EST955465 Sequencing ESTs from loblo... 32 3.8
gb|DN460666.1|DN460666 EST956465 Sequencing ESTs from loblo... 32 3.8
gb|DN460883.1|DN460883 EST956682 Sequencing ESTs from loblo... 32 3.8
gb|DN461056.1|DN461056 EST956855 Sequencing ESTs from loblo... 32 3.8
gb|DN461758.1|DN461758 EST957557 Sequencing ESTs from loblo... 32 3.8
gb|DN462897.1|DN462897 EST958696 Sequencing ESTs from loblo... 32 3.8
gb|DN463134.1|DN463134 EST958933 Sequencing ESTs from loblo... 32 3.8
gb|DN463237.1|DN463237 EST959036 Sequencing ESTs from loblo... 32 3.8
gb|DN464460.1|DN464460 EST960259 Sequencing ESTs from loblo... 32 3.8
gb|DN608979.1|DN608979 EST962029 Subtracted pine embryo lib... 32 3.8
gb|DN611499.1|DN611499 EST964549 Subtracted pine embryo lib... 32 3.8
gb|DN613340.1|DN613340 EST966390 Subtracted pine embryo lib... 32 3.8
gb|DN629039.1|DN629039 EST979855 Subtracted pine embryo lib... 32 3.8
gb|DN629499.1|DN629499 EST980315 Subtracted pine embryo lib... 32 3.8
gb|DN630223.1|DN630223 EST981039 Subtracted pine embryo lib... 32 3.8
gb|DN632784.1|DN632784 EST983600 Subtracted pine embryo lib... 32 3.8
gb|DR054175.1|DR054175 RTCA1_15_E04.g1_A029 Roots minus cal... 32 3.8
gb|DR695176.1|DR695176 EST1085269 Normalized pine embryo li... 32 3.8
gb|DT625573.1|DT625573 EST1157497 Sequencing ESTs from lobl... 32 3.8
gb|DT625621.1|DT625621 EST1157545 Sequencing ESTs from lobl... 32 3.8
gb|DT626566.1|DT626566 EST1158490 Sequencing ESTs from lobl... 32 3.8
gb|DT624490.1|DT624490 EST1158777 Sequencing ESTs from lobl... 32 3.8
gb|DT624999.1|DT624999 EST1159274 Sequencing ESTs from lobl... 32 3.8
gb|DT625047.1|DT625047 EST1159322 Sequencing ESTs from lobl... 32 3.8
gb|DT625129.1|DT625129 EST1159404 Sequencing ESTs from lobl... 32 3.8
gb|DR385458.1|DR385458 RTHG1_8_F10.g1_A029 Roots plus added... 25 4.0
gb|DR014512.1|DR014512 HEAT1_50_A04.b1_A029 Root at 37 C fo... 25 4.0
gb|DR014591.1|DR014591 HEAT1_50_A04.g1_A029 Root at 37 C fo... 25 4.0
gb|CO167255.1|CO167255 FLD1_67_G10.g1_A029 Root flooded Pin... 25 4.0
gb|DR387061.1|DR387061 RTHG1_19_D11.b1_A029 Roots plus adde... 25 4.0
gb|DR387130.1|DR387130 RTHG1_19_D11.g1_A029 Roots plus adde... 25 4.0
gb|CO159555.1|CO159555 FLD1_14_G03.b1_A029 Root flooded Pin... 25 4.0
gb|DR388132.1|DR388132 RTHG1_26_H03.b1_A029 Roots plus adde... 25 4.1
gb|CF388720.1|CF388720 RTDR2_15_F01.b1_A021 Loblolly pine r... 25 4.1
gb|DR388348.1|DR388348 RTHG1_27_E05.g1_A029 Roots plus adde... 28 4.2
gb|DR683495.1|DR683495 EST1073571 Normalized pine embryo li... 28 4.6
gb|DN463044.1|DN463044 EST958843 Sequencing ESTs from loblo... 29 5.1
gb|CO158910.1|CO158910 FLD1_10_C05.b1_A029 Root flooded Pin... 24 5.1
gb|AW056580.1|AW056580 ST52G12 Pine TriplEx shoot tip libra... 32 5.2
gb|CF665230.1|CF665230 RTCNT1_14_E11.g1_A029 Root control P... 32 5.2
gb|CV134322.1|CV134322 EST845531 Sequencing ESTs from loblo... 32 5.2
gb|CV134515.1|CV134515 EST845724 Sequencing ESTs from loblo... 32 5.2
gb|CV135142.1|CV135142 EST846351 Sequencing ESTs from loblo... 32 5.2
gb|CV135521.1|CV135521 EST846730 Sequencing ESTs from loblo... 32 5.2
gb|CV138162.1|CV138162 EST849371 Sequencing ESTs from loblo... 32 5.2
gb|CV144377.1|CV144377 EST855586 Sequencing ESTs from loblo... 32 5.2
gb|CV147101.1|CV147101 EST858310 Sequencing ESTs from loblo... 32 5.2
gb|CX647849.1|CX647849 COLD1_20_G06.g1_A029 Root cold Pinus... 32 5.2
gb|DN445521.1|DN445521 EST941320 Sequencing ESTs from loblo... 32 5.2
gb|DN448458.1|DN448458 EST944257 Sequencing ESTs from loblo... 32 5.2
gb|DN453559.1|DN453559 EST949358 Sequencing ESTs from loblo... 32 5.2
gb|DN454160.1|DN454160 EST949959 Sequencing ESTs from loblo... 32 5.2
gb|DN456890.1|DN456890 EST952689 Sequencing ESTs from loblo... 32 5.2
gb|DN457474.1|DN457474 EST953273 Sequencing ESTs from loblo... 32 5.2
gb|DN460013.1|DN460013 EST955812 Sequencing ESTs from loblo... 32 5.2
gb|DN460583.1|DN460583 EST956382 Sequencing ESTs from loblo... 32 5.2
gb|DN462351.1|DN462351 EST958150 Sequencing ESTs from loblo... 32 5.2
gb|DN465094.1|DN465094 EST960893 Sequencing ESTs from loblo... 32 5.2
gb|DR060490.1|DR060490 RTNIT1_28_D11.b1_A029 Roots minus ni... 32 5.2
gb|DR162099.1|DR162099 RTFE1_15_F06.g1_A029 Roots minus iro... 32 5.2
gb|DR167396.1|DR167396 RTPHOS1_18_C03.g1_A029 Roots minus p... 32 5.2
gb|DR180915.1|DR180915 RTMNUT1_35_D11.g1_A029 Roots minus m... 32 5.2
gb|DT624982.1|DT624982 EST1159257 Sequencing ESTs from lobl... 32 5.2
gb|DT626703.1|DT626703 EST1159779 Sequencing ESTs from lobl... 32 5.2
gb|BX679241.1|BX679241 BX679241 RS Pinus pinaster cDNA clon... 32 5.2
gb|DR013797.1|DR013797 HEAT1_21_C12.g1_A029 Root at 37 C fo... 26 5.4
gb|DT626883.1|DT626883 EST1159959 Sequencing ESTs from lobl... 29 5.4
gb|CF670682.1|CF670682 RTCNT1_51_G10.g1_A029 Root control P... 26 5.5
gb|DR056772.1|DR056772 RTCA1_32_A05.g1_A029 Roots minus cal... 26 5.5
gb|BM492456.1|BM492456 NXRV_025_F01_F NXRV (Nsf Xylem Root ... 30 5.6
gb|CO158984.1|CO158984 FLD1_10_C05.g1_A029 Root flooded Pin... 24 6.3
gb|CF666665.1|CF666665 RTCNT1_25_D03.b1_A029 Root control P... 31 7.1
gb|DR081049.1|DR081049 RTFEPL1_27_B07.b1_A029 Roots plus ad... 31 7.1
gb|DR743531.1|DR743531 RTCU1_16_B04.g1_A029 Roots plus adde... 31 7.1
gb|DR095868.1|DR095868 STRR1_24_D10.b1_A033 Stem Response R... 26 7.4
gb|DR024349.1|DR024349 STRS1_64_A01.g1_A034 Shoot tip pitch... 24 7.6
gb|DT625347.1|DT625347 EST1159622 Sequencing ESTs from lobl... 25 9.6
gb|DN459511.1|DN459511 EST955310 Sequencing ESTs from loblo... 25 9.6
gb|CO160203.1|CO160203 FLD1_19_A05.g1_A029 Root flooded Pin... 25 9.7
gb|CO160513.1|CO160513 FLD1_21_B12.g1_A029 Root flooded Pin... 25 9.7
gb|BX255232.1|BX255232 BX255232 Pinus pinaster differenciat... 31 9.7
gb|CF399401.1|CF399401 RTDS3_28_G08.g1_A022 Drought-stresse... 31 9.7
gb|CO364154.1|CO364154 RTK1_14_B08.b1_A029 Roots minus pota... 31 9.7
gb|DR090200.1|DR090200 RTAL1_13_H06.b1_A029 Roots plus adde... 31 9.7
gb|DR178809.1|DR178809 RTMNUT1_14_D05.b1_A029 Roots minus m... 31 9.7
gb|DR178960.1|DR178960 RTMNUT1_15_C05.b1_A029 Roots minus m... 31 9.7
gb|DR181965.1|DR181965 RTMNUT1_42_C10.b1_A029 Roots minus m... 31 9.7
gb|DR182062.1|DR182062 RTMNUT1_42_E02.g1_A029 Roots minus m... 31 9.7
gb|CF665579.1|CF665579 RTCNT1_16_H12.g1_A029 Root control P... 25 9.8
>gb|DR099919.1|DR099919 STRR1_60_B10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_60_B10_A033 3', mRNA sequence
Length = 803
Score = 247 bits (533), Expect = 8e-065
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 84 SDAKVYKLEDVSRHNTNQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 263
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 264 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSSEFIIKILQFLVPLLILG 443
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 444 LAVAVRYYTKS 476
Score = 140 bits (300), Expect = 1e-032
Identities = 72/134 (53%), Positives = 85/134 (63%)
Frame = +2 / -2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 475 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 296
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS LVLCL
Sbjct: 295 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS*LVLCLE 116
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 115 TSSSL*TLASEAIL 74
Score = 60.6 bits (126), Expect = 1e-008
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 320 IYVSHVIFIHHSSSTITMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 141
Score = 44.6 bits (91), Expect = 7e-004
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3 / -3
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPPPRGCTPWIP 578
HL++HR H +Q + H Q PP+ W H TP + +S+ C + C PW P
Sbjct: 261 HLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPD*CYVLKHLQVCRPWHP 85
Score = 40.0 bits (81), Expect = 0.017
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +2
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 128 H*SGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT***C*SYDG*ILR 307
Query: 355 G 353
G
Sbjct: 308 G 310
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +1
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 163 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVIVLEL*WMNITW 309
>gb|DR099974.1|DR099974 STRR1_60_B10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_60_B10_A033 5', mRNA sequence
Length = 701
Score = 247 bits (533), Expect = 8e-065
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 194 SDAKVYKLEDVSRHNTNQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 373
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 374 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSSEFIIKILQFLVPLLILG 553
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 554 LAVAVRYYTKS 586
Score = 140 bits (300), Expect = 1e-032
Identities = 72/134 (53%), Positives = 85/134 (63%)
Frame = +2 / -3
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 585 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 406
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS LVLCL
Sbjct: 405 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS*LVLCLE 226
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 225 TSSSL*TLASEAIL 184
Score = 60.6 bits (126), Expect = 1e-008
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 430 IYVSHVIFIHHSSSTITMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 251
Score = 44.6 bits (91), Expect = 7e-004
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3 / -1
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPPPRGCTPWIP 578
HL++HR H +Q + H Q PP+ W H TP + +S+ C + C PW P
Sbjct: 371 HLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPD*CYVLKHLQVCRPWHP 195
Score = 40.0 bits (81), Expect = 0.017
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +1
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 238 H*SGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT***C*SYDG*ILR 417
Query: 355 G 353
G
Sbjct: 418 G 420
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +3
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 273 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVIVLEL*WMNITW 419
>gb|DR684773.1|DR684773 EST1074850 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAW49 3' end, mRNA sequence
Length = 581
Score = 246 bits (532), Expect = 1e-064
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 35 SDAKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 214
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 215 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSSEFIIKILQFLVPLLILG 394
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 395 LAVAVRYYTKS 427
Score = 136 bits (292), Expect = 1e-031
Identities = 71/134 (52%), Positives = 84/134 (62%)
Frame = +2 / -3
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 426 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 247
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 246 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 67
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 66 TSSSL*TLASEAIL 25
Score = 60.6 bits (126), Expect = 1e-008
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 271 IYVSHVIFIHHSSSTITMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 92
Score = 45.1 bits (92), Expect = 5e-004
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3 / -1
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPPPRGCTPWIP 578
HL++HR H +Q + H Q PP+ W H TP + +S+ C + C PW P
Sbjct: 212 HLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDECYVLKHLQVCRPWHP 36
Score = 41.8 bits (85), Expect = 0.005
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +1
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 79 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT***C*SYDG*ILR 258
Query: 355 G 353
G
Sbjct: 259 G 261
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +3
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 114 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVIVLEL*WMNITW 260
>gb|DR693416.1|DR693416 EST1083504 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADY85 3' end, mRNA sequence
Length = 630
Score = 246 bits (532), Expect = 1e-064
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 35 SDAKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 214
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 215 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSSEFIIKILQFLVPLLILG 394
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 395 LAVAVRYYTKS 427
Score = 136 bits (292), Expect = 1e-031
Identities = 71/134 (52%), Positives = 84/134 (62%)
Frame = +2 / -1
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 426 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 247
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 246 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 67
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 66 TSSSL*TLASEAIL 25
Score = 60.6 bits (126), Expect = 1e-008
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -3
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 271 IYVSHVIFIHHSSSTITMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 92
Score = 45.1 bits (92), Expect = 5e-004
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3 / -2
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPPPRGCTPWIP 578
HL++HR H +Q + H Q PP+ W H TP + +S+ C + C PW P
Sbjct: 212 HLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDECYVLKHLQVCRPWHP 36
Score = 41.8 bits (85), Expect = 0.005
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +1
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 79 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT***C*SYDG*ILR 258
Query: 355 G 353
G
Sbjct: 259 G 261
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +3
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 114 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVIVLEL*WMNITW 260
>gb|CX714210.1|CX714210 RTPQ1_19_E04.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_19_E04_A032 3', mRNA sequence
Length = 682
Score = 246 bits (531), Expect = 1e-064
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 76 SDAKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 255
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 256 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSPEFIIKILQFLVPLLILG 435
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 436 LAVAVRYYTKS 468
Score = 137 bits (294), Expect = 7e-032
Identities = 71/134 (52%), Positives = 84/134 (62%)
Frame = +2 / -3
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 467 DLV**RTATAKPKMSNGTRNCKIFMINSGDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 288
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 287 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 108
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 107 TSSSL*TLASEAIL 66
Score = 61.1 bits (127), Expect = 8e-009
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 312 IYVSHVIFIHHSSSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 133
Score = 48.7 bits (100), Expect = 4e-005
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3 / -1
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
P + PS C HL++HR H +Q + H Q PP+ W H TP + +S+
Sbjct: 301 PRNIHPS*L*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDE 122
Query: 534 CCAWPPPRGCTPWIP 578
C + C PW P
Sbjct: 121 CYVLKHLQVCRPWHP 77
Score = 43.7 bits (89), Expect = 0.001
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +3
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 120 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*SYDG*ILR 299
Query: 355 G 353
G
Sbjct: 300 G 302
Score = 38.2 bits (77), Expect = 0.061
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +2
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 155 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLEL*WMNITW 301
>gb|CX714242.1|CX714242 RTPQ1_19_E04.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_19_E04_A032 5', mRNA sequence
Length = 744
Score = 246 bits (531), Expect = 1e-064
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 118 SDAKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 297
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 298 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSPEFIIKILQFLVPLLILG 477
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 478 LAVAVRYYTKS 510
Score = 137 bits (294), Expect = 7e-032
Identities = 71/134 (52%), Positives = 84/134 (62%)
Frame = +2 / -2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 509 DLV**RTATAKPKMSNGTRNCKIFMINSGDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 330
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 329 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 150
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 149 TSSSL*TLASEAIL 108
Score = 61.1 bits (127), Expect = 8e-009
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 354 IYVSHVIFIHHSSSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 175
Score = 48.7 bits (100), Expect = 4e-005
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3 / -3
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
P + PS C HL++HR H +Q + H Q PP+ W H TP + +S+
Sbjct: 343 PRNIHPS*L*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDE 164
Query: 534 CCAWPPPRGCTPWIP 578
C + C PW P
Sbjct: 163 CYVLKHLQVCRPWHP 119
Score = 43.7 bits (89), Expect = 0.001
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +3
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 162 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*SYDG*ILR 341
Query: 355 G 353
G
Sbjct: 342 G 344
Score = 38.2 bits (77), Expect = 0.061
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +2
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 197 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLEL*WMNITW 343
>gb|DR693095.1|DR693095 EST1083183 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADU54 3' end, mRNA sequence
Length = 806
Score = 246 bits (531), Expect = 1e-064
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 68 SDAKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 247
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 248 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSPEFIIKILQFLVPLLILG 427
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 428 LAVAVRYYTKS 460
Score = 137 bits (294), Expect = 7e-032
Identities = 71/134 (52%), Positives = 84/134 (62%)
Frame = +2 / -3
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 459 DLV**RTATAKPKMSNGTRNCKIFMINSGDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 280
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 279 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 100
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 99 TSSSL*TLASEAIL 58
Score = 61.1 bits (127), Expect = 8e-009
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 304 IYVSHVIFIHHSSSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 125
Score = 48.7 bits (100), Expect = 4e-005
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3 / -1
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
P + PS C HL++HR H +Q + H Q PP+ W H TP + +S+
Sbjct: 293 PRNIHPS*L*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDE 114
Query: 534 CCAWPPPRGCTPWIP 578
C + C PW P
Sbjct: 113 CYVLKHLQVCRPWHP 69
Score = 43.7 bits (89), Expect = 0.001
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +1
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 112 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*SYDG*ILR 291
Query: 355 G 353
G
Sbjct: 292 G 294
Score = 38.2 bits (77), Expect = 0.061
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +3
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 147 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLEL*WMNITW 293
>gb|DT637956.1|DT637956 EST1152887 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH949 3' end, mRNA sequence
Length = 735
Score = 246 bits (531), Expect = 1e-064
Identities = 98/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 76 SDAKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 255
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 256 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSPEFIIKILQFLVPLLILG 435
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 436 LAVAVRYYTKS 468
Score = 137 bits (294), Expect = 7e-032
Identities = 71/134 (52%), Positives = 84/134 (62%)
Frame = +2 / -2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 467 DLV**RTATAKPKMSNGTRNCKIFMINSGDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 288
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 287 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 108
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 107 TSSSL*TLASEAIL 66
Score = 61.1 bits (127), Expect = 8e-009
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 312 IYVSHVIFIHHSSSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 133
Score = 48.7 bits (100), Expect = 4e-005
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3 / -3
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
P + PS C HL++HR H +Q + H Q PP+ W H TP + +S+
Sbjct: 301 PRNIHPS*L*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDE 122
Query: 534 CCAWPPPRGCTPWIP 578
C + C PW P
Sbjct: 121 CYVLKHLQVCRPWHP 77
Score = 43.7 bits (89), Expect = 0.001
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +3
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 120 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*SYDG*ILR 299
Query: 355 G 353
G
Sbjct: 300 G 302
Score = 38.2 bits (77), Expect = 0.061
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +2
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 155 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLEL*WMNITW 301
>gb|DT635691.1|DT635691 EST1150622 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGJ56 3' end, mRNA sequence
Length = 663
Score = 244 bits (527), Expect = 5e-064
Identities = 97/129 (75%), Positives = 113/129 (87%)
Frame = -1 / +3
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGH 394
+KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDVGH
Sbjct: 63 AKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDVGH 242
Query: 393 SSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLA 214
S +ARAMMDEY VG+ID +++P K KYTP KQ YN DK+ EF+IKILQFLVPL ILGLA
Sbjct: 243 SDSARAMMDEYYVGDIDPSSVPPKPKYTPAKQAPYNPDKSSEFIIKILQFLVPLLILGLA 422
Query: 213 VAVRMYTKS 187
VAVR YTKS
Sbjct: 423 VAVRYYTKS 449
Score = 135 bits (290), Expect = 3e-031
Identities = 71/128 (55%), Positives = 81/128 (63%)
Frame = +2 / -3
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 448 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFGGTDEGSMSPT*YS 269
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 268 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 89
Query: 548 TSSRVYTL 571
TSS + TL
Sbjct: 88 TSSSL*TL 65
Score = 60.6 bits (126), Expect = 1e-008
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 293 IYVSHVIFIHHSSSTITMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 114
Score = 45.1 bits (92), Expect = 5e-004
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3 / -1
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPPPRGCTPWIP 578
HL++HR H +Q + H Q PP+ W H TP + +S+ C + C PW P
Sbjct: 234 HLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDECYVLKHLQVCRPWHP 58
Score = 41.8 bits (85), Expect = 0.005
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +2
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 101 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT***C*SYDG*ILR 280
Query: 355 G 353
G
Sbjct: 281 G 283
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +1
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 136 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVIVLEL*WMNITW 282
>gb|DR692855.1|DR692855 EST1082943 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADR18 3' end, mRNA sequence
Length = 837
Score = 243 bits (525), Expect = 1e-063
Identities = 97/131 (74%), Positives = 114/131 (87%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 26 SDAKVYKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 205
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 206 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSPEFIIKILQFLVPLLILG 385
Query: 219 LAVAVRMYTKS 187
AVAVR YTKS
Sbjct: 386 SAVAVRYYTKS 418
Score = 136 bits (292), Expect = 1e-031
Identities = 71/134 (52%), Positives = 83/134 (61%)
Frame = +2 / -1
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 417 DLV**RTATAEPKMSNGTRNCKIFMINSGDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 238
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 237 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 58
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 57 TSSSL*TLASEAIL 16
Score = 60.2 bits (125), Expect = 1e-008
Identities = 22/60 (36%), Positives = 41/60 (68%)
Frame = +1 / -3
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 262 IYVSHVIFIHHSPSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 83
Score = 49.2 bits (101), Expect = 3e-005
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3 / -2
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
P + PS C HL++HR H +Q + H Q PP+ W H TP + +S+
Sbjct: 251 PRNIHPS*P*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDE 72
Query: 534 CCAWPPPRGCTPWIP 578
C + C PW P
Sbjct: 71 CYVLKHLQVCRPWHP 27
Score = 42.8 bits (87), Expect = 0.003
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +1
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 70 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*GYDG*ILR 249
Query: 355 G 353
G
Sbjct: 250 G 252
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +3
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 105 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLGL*WMNITW 251
>gb|DR689549.1|DR689549 EST1079635 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACK15 3' end, mRNA sequence
Length = 787
Score = 243 bits (524), Expect = 1e-063
Identities = 97/131 (74%), Positives = 115/131 (87%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S +KVY LE+V++H+T DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDV
Sbjct: 65 SDAKVYKLEDVSRHSTHRDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDV 244
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILG
Sbjct: 245 GHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSPEFIIKILQFLVPLLILG 424
Query: 219 LAVAVRMYTKS 187
LAVAVR YTKS
Sbjct: 425 LAVAVRYYTKS 457
Score = 138 bits (297), Expect = 3e-032
Identities = 71/134 (52%), Positives = 84/134 (62%)
Frame = +2 / -2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 456 DLV**RTATAKPKMSNGTRNCKIFMINSGDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 277
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 276 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQSR*VLCLE 97
Query: 548 TSSRVYTLDPDILV 589
TSS + TL + ++
Sbjct: 96 TSSSL*TLASEAIL 55
Score = 61.1 bits (127), Expect = 8e-009
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / -1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 301 IYVSHVIFIHHSSSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 122
Score = 48.7 bits (100), Expect = 4e-005
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3 / -3
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPW 533
P + PS C HL++HR H +Q + H Q PP+ W H TP + +S+
Sbjct: 290 PRNIHPS*L*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTPFLQSLSSNPDE 111
Query: 534 CCAWPPPRGCTPWIP 578
C + C PW P
Sbjct: 110 CYVLKHLQVCRPWHP 66
Score = 43.7 bits (89), Expect = 0.001
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / +1
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 109 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*SYDG*ILR 288
Query: 355 G 353
G
Sbjct: 289 G 291
Score = 38.2 bits (77), Expect = 0.061
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +3
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 144 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLEL*WMNITW 290
>gb|DR015187.1|DR015187 STRS1_2_B02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_B02_A034 3', mRNA sequence
Length = 783
Score = 241 bits (521), Expect = 3e-063
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 89 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 268
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 269 GHSTTAREMMDQYYIGEIDPSTFPKKATYNPAKQAHYDQDKTSEFIIRILQFLVPLAILG 448
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 449 LAVAVRFYTKT 481
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 462 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 283
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 282 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 109
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 307 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 146
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 147 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 308
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 127 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 306
Query: 361 L 359
L
Sbjct: 307 L 309
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 275 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 117
>gb|BQ634682.1|BQ634682 NXRV072_A03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_A03 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 660
Score = 241 bits (520), Expect = 5e-063
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 110 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 289
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 290 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 469
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 470 LAVAVRFYTKT 502
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 483 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 304
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 303 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 130
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 328 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 167
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 168 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 329
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 148 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 327
Query: 361 L 359
L
Sbjct: 328 L 330
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 296 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 138
>gb|CF665710.1|CF665710 RTCNT1_18_A07.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_18_A07_A029 3', mRNA sequence
Length = 765
Score = 241 bits (520), Expect = 5e-063
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = -1 / -2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 482 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 303
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 302 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 123
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 122 LAVAVRFYTKT 90
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / +1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 109 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 288
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 289 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 462
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / +3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 264 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 425
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / -3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 424 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 263
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / -1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 444 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 265
Query: 361 L 359
L
Sbjct: 264 L 262
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / +2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 296 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 454
>gb|CO169069.1|CO169069 NDL1_4_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_4_B04_A029 5', mRNA sequence
Length = 680
Score = 241 bits (520), Expect = 5e-063
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 147 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 326
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 327 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 506
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 507 LAVAVRFYTKT 539
Score = 144 bits (309), Expect = 6e-034
Identities = 71/118 (60%), Positives = 77/118 (65%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +ILM NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 520 TATANPRIANGTKNCKILMINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 341
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 340 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 167
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 365 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 204
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 205 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 366
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 185 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 364
Query: 361 L 359
L
Sbjct: 365 L 367
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 333 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 175
>gb|CO370232.1|CO370232 RTK1_66_B04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_66_B04_A029 5', mRNA sequence
Length = 640
Score = 241 bits (520), Expect = 5e-063
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 158 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 337
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 338 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 517
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 518 LAVAVRFYTKT 550
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 531 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 352
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 351 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 178
Score = 61.1 bits (127), Expect = 8e-009
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +1 / -1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
+ T+ VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 394 VYFTNVVLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 215
Score = 57.4 bits (119), Expect = 1e-007
Identities = 37/101 (36%), Positives = 54/101 (53%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 196 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 375
Query: 361 LSG*D*CSHDTHQGEVHAPQAAALQPGQDPGVRHQDPPVFG 239
L *+ + + +G + A L GQ+ + +Q+ VFG
Sbjct: 376 LHW*NRPFNIS*EGNIQTC*AGTL*SGQNLRIYYQNFAVFG 498
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 216 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 377
Score = 36.8 bits (74), Expect = 0.16
Identities = 25/67 (37%), Positives = 29/67 (43%)
Frame = +3 / -3
Query: 351 HPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRP 530
H S PS CA HL+N H Q H L G P+ H TP +*+ASS
Sbjct: 386 HQCSIGPSSP*PWYCAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPC 207
Query: 531 WCCAWPP 551
CA P
Sbjct: 206 CNCAQRP 186
>gb|DR015267.1|DR015267 STRS1_2_B02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_B02_A034 5', mRNA sequence
Length = 763
Score = 241 bits (520), Expect = 5e-063
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 64 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 243
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 244 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 423
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 424 LAVAVRFYTKT 456
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 437 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 258
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 257 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 84
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 282 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 121
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 122 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 283
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 102 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 281
Query: 361 L 359
L
Sbjct: 282 L 284
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 250 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 92
>gb|BX249163.1|BX249163 BX249163 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP020G02 similar to CYTOCHROME B5, mRNA
sequence
Length = 693
Score = 240 bits (519), Expect = 7e-063
Identities = 96/131 (73%), Positives = 111/131 (84%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 5 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTNFLEEHPGGDEVLLSATGKDATDDFEDV 184
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 185 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 364
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 365 LAVAVRFYTKT 397
Score = 140 bits (301), Expect = 8e-033
Identities = 69/118 (58%), Positives = 77/118 (65%)
Frame = +2 / -1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 378 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 199
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D LVT YT PP+TSQQS L LC TS+R
Sbjct: 198 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKKLVTSYTFPPITSQQSLL*LCSETSAR 25
Score = 58.3 bits (121), Expect = 5e-008
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +1 / -3
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I+ ++ VLVHH VP+IF+II I S Q+ I+S V QK+G+I+HL+ +++PA
Sbjct: 241 IDFSNVVLVHHLPSRGTVPNIFKIICCIFASC**QHFISSWVFFQKIGNIIHLSTNNKPA 62
Score = 49.2 bits (101), Expect = 3e-005
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA + +GV C Q G +P RR* + + + Q C R*F RC AQ H +DG +
Sbjct: 43 AQLQQGLLACYWWKGV*CYQFFGRTPRRR*SAVISNWQRCNR*F*RCWAQYHG*GDDGPI 222
Query: 361 L 359
L
Sbjct: 223 L 225
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG RC M P FW+ T E M C L +M MI KM GT +*WT+T
Sbjct: 63 AGLLLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQMILKMLGTVPRLGR*WTNT 224
Score = 44.6 bits (91), Expect = 7e-004
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+NH H Q H L G P+ W H TP +*+ASS CA P
Sbjct: 191 CAQHLQNHLLHLCQLLITALHLLLGVLPKNW*HHTPFHQ*QASSPCCNCAQRP 33
>gb|BX252786.1|BX252786 BX252786 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP070F12 similar to CYTOCHROME B5, mRNA
sequence
Length = 598
Score = 240 bits (519), Expect = 7e-063
Identities = 96/131 (73%), Positives = 111/131 (84%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 79 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTNFLEEHPGGDEVLLSATGKDATDDFEDV 258
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 259 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 438
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 439 LAVAVRFYTKT 471
Score = 140 bits (301), Expect = 8e-033
Identities = 69/118 (58%), Positives = 77/118 (65%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 452 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 273
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D LVT YT PP+TSQQS L LC TS+R
Sbjct: 272 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKKLVTSYTFPPITSQQSLL*LCSETSAR 99
Score = 58.3 bits (121), Expect = 5e-008
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I+ ++ VLVHH VP+IF+II I S Q+ I+S V QK+G+I+HL+ +++PA
Sbjct: 315 IDFSNVVLVHHLPSRGTVPNIFKIICCIFASC**QHFISSWVFFQKIGNIIHLSTNNKPA 136
Score = 49.2 bits (101), Expect = 3e-005
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA + +GV C Q G +P RR* + + + Q C R*F RC AQ H +DG +
Sbjct: 117 AQLQQGLLACYWWKGV*CYQFFGRTPRRR*SAVISNWQRCNR*F*RCWAQYHG*GDDGPI 296
Query: 361 L 359
L
Sbjct: 297 L 299
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG RC M P FW+ T E M C L +M MI KM GT +*WT+T
Sbjct: 137 AGLLLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQMILKMLGTVPRLGR*WTNT 298
Score = 44.6 bits (91), Expect = 7e-004
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+NH H Q H L G P+ W H TP +*+ASS CA P
Sbjct: 265 CAQHLQNHLLHLCQLLITALHLLLGVLPKNW*HHTPFHQ*QASSPCCNCAQRP 107
>gb|DR080765.1|DR080765 RTFEPL1_25_C06.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_25_C06_A029 3', mRNA sequence
Length = 768
Score = 240 bits (518), Expect = 9e-063
Identities = 96/131 (73%), Positives = 111/131 (84%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 55 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTHFLEEHPGGDEVLLSATGKDATDDFEDV 234
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 235 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 414
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 415 LAVAVRFYTKT 447
Score = 139 bits (299), Expect = 1e-032
Identities = 69/118 (58%), Positives = 76/118 (64%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 428 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 249
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D VT YT PPMTSQQS L LC TS+R
Sbjct: 248 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKKWVTSYTFPPMTSQQSLL*LCSETSAR 75
Score = 58.8 bits (122), Expect = 4e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QK+G+I+HL+ +D+PA
Sbjct: 273 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKMGNIIHLSTNDKPA 112
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 113 AGLSLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 274
Score = 46.9 bits (96), Expect = 1e-004
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 93 AQLQQGLLACHWWKGV*CYPFFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 272
Query: 361 L 359
L
Sbjct: 273 L 275
Score = 35.0 bits (70), Expect = 0.56
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 241 CAQHLQNRLLHLCQLLITALHLLLGVLPKNG*HHTPFHQ*QASSPCCNCAQRP 83
>gb|DR080835.1|DR080835 RTFEPL1_25_C06.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_25_C06_A029 5', mRNA sequence
Length = 652
Score = 240 bits (518), Expect = 9e-063
Identities = 96/131 (73%), Positives = 111/131 (84%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 143 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTHFLEEHPGGDEVLLSATGKDATDDFEDV 322
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 323 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 502
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 503 LAVAVRFYTKT 535
Score = 139 bits (299), Expect = 1e-032
Identities = 69/118 (58%), Positives = 76/118 (64%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 516 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 337
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D VT YT PPMTSQQS L LC TS+R
Sbjct: 336 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKKWVTSYTFPPMTSQQSLL*LCSETSAR 163
Score = 58.8 bits (122), Expect = 4e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QK+G+I+HL+ +D+PA
Sbjct: 361 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKMGNIIHLSTNDKPA 200
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 201 AGLSLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 362
Score = 46.9 bits (96), Expect = 1e-004
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 181 AQLQQGLLACHWWKGV*CYPFFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 360
Query: 361 L 359
L
Sbjct: 361 L 363
Score = 35.0 bits (70), Expect = 0.56
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 329 CAQHLQNRLLHLCQLLITALHLLLGVLPKNG*HHTPFHQ*QASSPCCNCAQRP 171
>gb|DR116993.1|DR116993 RTMG1_4_C06.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_4_C06_A029 3', mRNA sequence
Length = 867
Score = 240 bits (518), Expect = 9e-063
Identities = 96/131 (73%), Positives = 111/131 (84%)
Frame = -1 / -2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 692 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTHFLEEHPGGDEVLLSATGKDATDDFEDV 513
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 512 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 333
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 332 LAVAVRFYTKT 300
Score = 139 bits (299), Expect = 1e-032
Identities = 69/118 (58%), Positives = 76/118 (64%)
Frame = +2 / +1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 319 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 498
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D VT YT PPMTSQQS L LC TS+R
Sbjct: 499 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKKWVTSYTFPPMTSQQSLL*LCSETSAR 672
Score = 58.8 bits (122), Expect = 4e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / +3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QK+G+I+HL+ +D+PA
Sbjct: 474 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKMGNIIHLSTNDKPA 635
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / -3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 634 AGLSLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 473
Score = 46.9 bits (96), Expect = 1e-004
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = -3 / -1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 654 AQLQQGLLACHWWKGV*CYPFFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 475
Query: 361 L 359
L
Sbjct: 474 L 472
Score = 35.0 bits (70), Expect = 0.56
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / +2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 506 CAQHLQNRLLHLCQLLITALHLLLGVLPKNG*HHTPFHQ*QASSPCCNCAQRP 664
>gb|DR681963.1|DR681963 EST1072038 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA452, mRNA sequence
Length = 853
Score = 239 bits (517), Expect = 1e-062
Identities = 95/131 (72%), Positives = 112/131 (85%)
Frame = -1 / -3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 728 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 549
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QD+T EF+I+ILQFLVPLAILG
Sbjct: 548 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDRTSEFIIRILQFLVPLAILG 369
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 368 LAVAVRFYTKT 336
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / +1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 355 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 534
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 535 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 708
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / +3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 510 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 671
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / -1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 670 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 509
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / -2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 690 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 511
Query: 361 L 359
L
Sbjct: 510 L 508
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / +2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 542 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 700
>gb|DT630885.1|DT630885 EST1145816 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF189 3' end, mRNA sequence
Length = 741
Score = 239 bits (517), Expect = 1e-062
Identities = 95/131 (72%), Positives = 112/131 (85%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 213 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 392
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QD+T EF+I+ILQFLVPLAILG
Sbjct: 393 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDRTSEFIIRILQFLVPLAILG 572
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 573 LAVAVRFYTKT 605
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 586 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 407
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 406 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 233
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 431 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 270
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 271 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 432
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 251 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 430
Query: 361 L 359
L
Sbjct: 431 L 433
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 399 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 241
>gb|BE452000.1|BE452000 NXCI_007_C04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_007_C04 5' similar to Arabidopsis
thaliana sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 575
Score = 238 bits (514), Expect = 3e-062
Identities = 95/129 (73%), Positives = 110/129 (85%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 71 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 250
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 251 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 430
Query: 219 LAVAVRMYT 193
LAVAVR YT
Sbjct: 431 LAVAVRFYT 457
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 444 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 265
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 264 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 91
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 289 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 128
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 129 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 290
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 109 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 288
Query: 361 L 359
L
Sbjct: 289 L 291
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 257 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 99
>gb|DR024769.1|DR024769 STRS1_67_H05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_67_H05_A034 3', mRNA sequence
Length = 846
Score = 238 bits (514), Expect = 3e-062
Identities = 95/130 (73%), Positives = 112/130 (86%)
Frame = -1 / -1
Query: 576 GSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVG 397
G + LE+V++HNT DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDVG
Sbjct: 834 GCQGLKLEDVSRHNTHQDCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDVG 655
Query: 396 HSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGL 217
HS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILGL
Sbjct: 654 HSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSSEFIIKILQFLVPLLILGL 475
Query: 216 AVAVRMYTKS 187
AVAVR YTKS
Sbjct: 474 AVAVRYYTKS 445
Score = 134 bits (287), Expect = 7e-031
Identities = 70/130 (53%), Positives = 80/130 (61%)
Frame = +2 / +2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 446 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 625
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLA 547
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS VLCL
Sbjct: 626 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS**VLCLE 805
Query: 548 TSSRVYTLDP 577
TSS + P
Sbjct: 806 TSSSLRPWHP 835
Score = 60.6 bits (126), Expect = 1e-008
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / +1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 601 IYVSHVIFIHHSSSTITMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 780
Score = 41.8 bits (85), Expect = 0.005
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -3 / -3
Query: 535 HQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLS 356
H LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L
Sbjct: 793 HSSGLLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT***C*SYDG*ILR 614
Query: 355 G 353
G
Sbjct: 613 G 611
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / -2
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 758 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVIVLEL*WMNITW 612
Score = 36.8 bits (74), Expect = 0.16
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3 / +3
Query: 402 HLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTP 500
HL++HR H +Q + H Q PP+ W H TP
Sbjct: 660 HLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTP 758
>gb|DR687593.1|DR687593 EST1077675 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABU31 3' end, mRNA sequence
Length = 741
Score = 238 bits (514), Expect = 3e-062
Identities = 95/131 (72%), Positives = 111/131 (84%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VL S+T KDATDDFEDV
Sbjct: 211 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLSSATGKDATDDFEDV 390
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 391 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 570
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 571 LAVAVRFYTKT 603
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 584 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 405
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 404 VVLCPTSSKSSVASLPVADDSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 231
Score = 59.3 bits (123), Expect = 3e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ + S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 429 VLVHHLPSRGTVPNIFKIVCCVFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 268
Score = 46.4 bits (95), Expect = 2e-004
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L + I KM GT +*WT+T
Sbjct: 269 AGLSLVERCMMLPNFWKNTQEEMKCCHQQLAKTQQTILKMLGTVPRLGR*WTNT 430
Score = 43.2 bits (88), Expect = 0.002
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q R F RC AQ H +DG +
Sbjct: 249 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRRNRRF*RCWAQYHG*GDDGPI 428
Query: 361 L 359
L
Sbjct: 429 L 431
Score = 30.9 bits (61), Expect = 9.7
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N Q H L G P+ H TP +*+ASS CA P
Sbjct: 397 CAQHLQNRLLRLCQLLMTALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 239
>gb|DT634041.1|DT634041 EST1148972 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG160 3' end, mRNA sequence
Length = 750
Score = 238 bits (514), Expect = 3e-062
Identities = 95/131 (72%), Positives = 111/131 (84%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VL S+T KDATDDFEDV
Sbjct: 219 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLSSATGKDATDDFEDV 398
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 399 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 578
Query: 219 LAVAVRMYTKS 187
LAVAVR YTK+
Sbjct: 579 LAVAVRFYTKT 611
Score = 142 bits (305), Expect = 2e-033
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 592 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 413
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 412 VVLCPTSSKSSVASLPVADDSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 239
Score = 59.3 bits (123), Expect = 3e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ + S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 437 VLVHHLPSRGTVPNIFKIVCCVFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 276
Score = 46.4 bits (95), Expect = 2e-004
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L + I KM GT +*WT+T
Sbjct: 277 AGLSLVERCMMLPNFWKNTQEEMKCCHQQLAKTQQTILKMLGTVPRLGR*WTNT 438
Score = 43.2 bits (88), Expect = 0.002
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q R F RC AQ H +DG +
Sbjct: 257 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRRNRRF*RCWAQYHG*GDDGPI 436
Query: 361 L 359
L
Sbjct: 437 L 439
Score = 30.9 bits (61), Expect = 9.7
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N Q H L G P+ H TP +*+ASS CA P
Sbjct: 405 CAQHLQNRLLRLCQLLMTALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 247
>gb|BI202865.1|BI202865 NXPV_091_E02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_091_E02 5' similar to Arabidopsis
thaliana sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 515
Score = 235 bits (507), Expect = 3e-061
Identities = 94/131 (71%), Positives = 110/131 (83%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 70 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 249
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P K HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 250 GHSTTAREMMDQYYIGEIDPSTFPKKXTYKPAKXXHYDQDKTSEFIIRILQFLVPLAILG 429
Query: 219 LAVAVRMYTKS 187
AVAVR YTK+
Sbjct: 430 XAVAVRFYTKT 462
Score = 136 bits (292), Expect = 1e-031
Identities = 69/118 (58%), Positives = 76/118 (64%)
Frame = +2 / -1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C L G+Y +G V SISP Y SII+ A
Sbjct: 443 TATAXPRIANGTKNCKILIINSEVLS*S*CXXLAGLYVXFLGNVEGSISPM*YWSIISLA 264
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 263 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 90
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 288 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 127
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 128 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 289
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 108 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 287
Query: 361 L 359
L
Sbjct: 288 L 290
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 256 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 98
>gb|BM427882.1|BM427882 NXRV_005_F01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_005_F01 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 576
Score = 234 bits (506), Expect = 4e-061
Identities = 94/130 (72%), Positives = 109/130 (83%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 66 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 245
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P K HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 246 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKXAHYDQDKTSEFIIRILQFLVPLAILG 425
Query: 219 LAVAVRMYTK 190
LAVAV YTK
Sbjct: 426 LAVAVLFYTK 455
Score = 137 bits (294), Expect = 7e-032
Identities = 69/118 (58%), Positives = 76/118 (64%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C L G+Y +G V SISP Y SII+ A
Sbjct: 439 TATANPRIANGTKNCKILIINSEVLS*S*CAXLAGLYVAFLGNVEGSISPM*YWSIISLA 260
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 259 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 86
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 284 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 123
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 124 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 285
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 104 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 283
Query: 361 L 359
L
Sbjct: 284 L 286
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 252 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 94
>gb|BQ701178.1|BQ701178 NXSI_023_E02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_023_E02 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 494
Score = 234 bits (506), Expect = 4e-061
Identities = 93/128 (72%), Positives = 109/128 (85%)
Frame = -1 / +1
Query: 570 KVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 391
KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDVGHS
Sbjct: 61 KVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDVGHS 240
Query: 390 STARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAV 211
+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQ VPLAILGLAV
Sbjct: 241 TTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQXXVPLAILGLAV 420
Query: 210 AVRMYTKS 187
AVR YTK+
Sbjct: 421 AVRFYTKT 444
Score = 136 bits (292), Expect = 1e-031
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = +2 / -1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GT +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 425 TATANPRIANGTXXCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 246
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 245 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 72
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 270 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 109
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 110 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 271
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 90 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 269
Query: 361 L 359
L
Sbjct: 270 L 272
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 238 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 80
>gb|BF517750.1|BF517750 NXSI_029_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_029_G09 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 501
Score = 230 bits (496), Expect = 1e-059
Identities = 92/128 (71%), Positives = 107/128 (83%)
Frame = -1 / +3
Query: 570 KVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 391
KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDVGHS
Sbjct: 9 KVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDVGHS 188
Query: 390 STARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAV 211
+TAR MMD+Y +GEID +T P K Y P KQ HY T EF+I+ILQFLVPLAILGLAV
Sbjct: 189 TTAREMMDQYYIGEIDPSTFPKKATYKPAKQXHYXXXXTSEFIIRILQFLVPLAILGLAV 368
Query: 210 AVRMYTKS 187
AVR YTK+
Sbjct: 369 AVRFYTKT 392
Score = 138 bits (297), Expect = 3e-032
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS V *C CL G+Y +G V SISP Y SII+ A
Sbjct: 373 TATANPRIANGTKNCKILIINSEVXXXS*CXCLAGLYVAFLGNVEGSISPM*YWSIISLA 194
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 193 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 20
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 218 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 57
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 58 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 219
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 38 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 217
Query: 361 L 359
L
Sbjct: 218 L 220
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 186 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 28
>gb|CD028507.1|CD028507 NXSI_119_G07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_119_G07 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 228 bits (493), Expect = 3e-059
Identities = 91/126 (72%), Positives = 106/126 (84%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 30 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 209
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 210 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILG 389
Query: 219 LAVAVR 202
VAVR
Sbjct: 390 XXVAVR 407
Score = 140 bits (301), Expect = 8e-033
Identities = 69/118 (58%), Positives = 76/118 (64%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TAT P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 403 TATXNPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 224
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 223 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 50
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 248 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 87
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 88 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 249
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 68 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 247
Query: 361 L 359
L
Sbjct: 248 L 250
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 216 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 58
>gb|CO159572.1|CO159572 FLD1_14_A02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_A02_A029 5', mRNA sequence
Length = 694
Score = 227 bits (490), Expect = 7e-059
Identities = 91/124 (73%), Positives = 105/124 (84%)
Frame = -1 / -2
Query: 558 LEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTAR 379
L EV++HN DCWLVIGGKVY+VT FLE+H GGD+VLLS+T KDATDDFEDVGHS+TAR
Sbjct: 693 LAEVSEHNYSKDCWLVIGGKVYDVTHFLEEHXGGDEVLLSATGKDATDDFEDVGHSTTAR 514
Query: 378 AMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRM 199
MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILGLAVAVR
Sbjct: 513 EMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILGLAVAVRF 334
Query: 198 YTKS 187
YTK+
Sbjct: 333 YTKT 322
Score = 139 bits (299), Expect = 1e-032
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / +2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 341 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 520
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D VT YT PPMTSQQS L LC TS+R
Sbjct: 521 VVLCPTSSKSSVASLPVADNSTSSPPXCSSKKWVTSYTFPPMTSQQSLL*LCSETSAR 694
Score = 59.7 bits (124), Expect = 2e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / +1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QK+G+I+HL+ +D+PA
Sbjct: 496 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSXVFFQKMGNIIHLSTNDKPA 657
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / -3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 656 AGLSLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 495
Score = 42.8 bits (87), Expect = 0.003
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -3 / -1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C G + RR* + + + Q C R F RC AQ H +DG +
Sbjct: 676 AQLQQGLLACHWWKGV*CYPFFGRTXRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 497
Query: 361 L 359
L
Sbjct: 496 L 494
Score = 31.8 bits (63), Expect = 5.2
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3 / +3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L P+ H TP +*+ASS CA P
Sbjct: 528 CAQHLQNRLLHLCQLLITALHLLLXVLPKNG*HHTPFHQ*QASSPCCNCAQRP 686
>gb|BE209160.1|BE209160 NXNV_164_F09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_164_F09 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 489
Score = 224 bits (484), Expect = 4e-058
Identities = 90/129 (69%), Positives = 105/129 (81%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HP D+VLLS+T KDATDDFEDV
Sbjct: 100 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPXXDEVLLSATGKDATDDFEDV 279
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+T R MMD+Y +GEID +T P Y P KQ HY+QDKT EF+I+ILQFLVPLAILG
Sbjct: 280 GHSTTXREMMDQYYIGEIDPSTFPKXXTYKPAKQAHYDQDKTXEFIIRILQFLVPLAILG 459
Query: 219 LAVAVRMYT 193
L VAVR YT
Sbjct: 460 LXVAVRFYT 486
Score = 139 bits (299), Expect = 1e-032
Identities = 70/118 (59%), Positives = 77/118 (65%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TAT P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+
Sbjct: 473 TATXNPRIANGTKNCKILIINSXVLS*S*CACLAGLYVXXLGNVEGSISPM*YWSIISLX 294
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 293 VVLCPTSSKSSVASLPVADNSTSSXXGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 120
Score = 57.0 bits (118), Expect = 1e-007
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I V QKLG+I+HL+ +D+PA
Sbjct: 318 VLVHHLPXRGTVPNIFKIVCCIFASC**QHFIXXWVFFQKLGNIIHLSTNDKPA 157
Score = 47.8 bits (98), Expect = 8e-005
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T M C L +M I KM GT +*WT+T
Sbjct: 158 AGLSLVERCMMLPNFWKNTXXXMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 319
Score = 32.7 bits (65), Expect = 2.7
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H G P+ H TP +*+ASS CA P
Sbjct: 286 CAQHLQNRLLHLCQLLITALHLXXGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 128
>gb|BX680008.1|BX680008 BX680008 RS Pinus pinaster cDNA clone RS38B01, mRNA sequence
Length = 484
Score = 217 bits (469), Expect(2) = 5e-058
Identities = 87/113 (76%), Positives = 100/113 (88%)
Frame = -1 / +2
Query: 525 DCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEI 346
DCW+VI GKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDVGHS +ARAMMDEY VG+I
Sbjct: 77 DCWIVIEGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDVGHSDSARAMMDEYYVGDI 256
Query: 345 DAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
D +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILGLAVAVR YTKS
Sbjct: 257 DPSSVPSKPKYTPAKQAPYNPDKSSEFIIKILQFLVPLLILGLAVAVRYYTKS 415
Score = 118 bits (253), Expect = 3e-026
Identities = 61/113 (53%), Positives = 70/113 (61%)
Frame = +2 / -2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 414 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 235
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQS 526
SIIA A+ LCPTSSKSSVASL V + NLVT YT P +T QQS
Sbjct: 234 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPSITIQQS 76
Score = 59.7 bits (124), Expect = 2e-008
Identities = 22/60 (36%), Positives = 41/60 (68%)
Frame = +1 / -1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+ + PA
Sbjct: 259 IYVSHVIFIHHSSSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSFNHYPA 80
Score = 42.8 bits (87), Expect = 0.003
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = -3 / +1
Query: 526 RLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLSG 353
RLL R+GV C+Q+ GG WRR* + + C R* RC C DG +L G
Sbjct: 76 RLLDSD*RKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*SYDG*ILRG 249
Score = 40.5 bits (82), Expect = 0.012
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3 / -3
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTP 500
P + PS C HL++HR H +Q + H Q PP+ W H TP
Sbjct: 248 PRNIHPS*L*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTP 102
Score = 38.2 bits (77), Expect = 0.061
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / +3
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 102 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLEL*WMNITW 248
Score = 27.2 bits (53), Expect(2) = 5e-058
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNT 532
S +K+Y LE+V++HNT
Sbjct: 22 SDAKLYKLEDVSRHNT 69
>gb|DR078228.1|DR078228 RTFEPL1_2_F05.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_2_F05_A029 5', mRNA sequence
Length = 830
Score = 221 bits (476), Expect = 6e-057
Identities = 88/113 (77%), Positives = 101/113 (89%)
Frame = -1 / -1
Query: 525 DCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEI 346
DCW+VIGGKVY+VTKFLEDHPGGD+VL+S+T KDATDDFEDVGHS +ARAMMDEY VG+I
Sbjct: 824 DCWIVIGGKVYDVTKFLEDHPGGDEVLISATGKDATDDFEDVGHSDSARAMMDEYYVGDI 645
Query: 345 DAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
D +++P+K KYTP KQ YN DK+ EF+IKILQFLVPL ILGLAVAVR YTKS
Sbjct: 644 DPSSVPSKPKYTPAKQAPYNPDKSPEFIIKILQFLVPLLILGLAVAVRYYTKS 486
Score = 123 bits (263), Expect = 1e-027
Identities = 62/113 (54%), Positives = 71/113 (62%)
Frame = +2 / +1
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 487 DLV**RTATAKPKMSNGTRNCKIFMINSGDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 666
Query: 368 SIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQS 526
SIIA A+ LCPTSSKSSVASL V + NLVT YT PP+T QQS
Sbjct: 667 SIIALALSLCPTSSKSSVASLPVAEINTSSPPGWSSKNLVTSYTFPPITIQQS 825
Score = 61.1 bits (127), Expect = 8e-009
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1 / +3
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQK G+I+HL+++ PA
Sbjct: 642 IYVSHVIFIHHSSSTVTMSNIFKVIGCIFTSC*DQHFISARMVLQKFGYIIHLSSNHYPA 821
Score = 40.9 bits (83), Expect = 0.009
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = -3 / -3
Query: 523 LLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLSG 353
LL R+GV C+Q+ GG WRR* + + C R* RC C DG +L G
Sbjct: 822 LLDSDWRKGV*CNQIFGGPSWRR*SVDLSNW*RCNR*L*RCWT**QC*SYDG*ILRG 652
Score = 40.5 bits (82), Expect = 0.012
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3 / +2
Query: 354 PLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTP 500
P + PS C HL++HR H +Q + H Q PP+ W H TP
Sbjct: 653 PRNIHPS*L*HCHYVQHLQSHRLHLYQLLRSTLHLRQDGPPKIWLHHTP 799
Score = 38.2 bits (77), Expect = 0.061
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2 / -2
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
RC M*P+FWR L M L +M PM KM + *W + W
Sbjct: 799 RCMM*PNFWRTILAEMKC*SQQLVKMQPMTLKMLDIVTVLEL*WMNITW 653
>gb|DR387158.1|DR387158 RTHG1_19_G09.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_19_G09_A029 5', mRNA sequence
Length = 738
Score = 221 bits (476), Expect = 6e-057
Identities = 87/113 (76%), Positives = 100/113 (88%)
Frame = -1 / +1
Query: 525 DCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEI 346
DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDVGHS+TAR MMD+Y +GEI
Sbjct: 112 DCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDVGHSTTAREMMDQYYIGEI 291
Query: 345 DAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
D +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILGLAVAVR YTK+
Sbjct: 292 DPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILGLAVAVRFYTKT 450
Score = 134 bits (288), Expect = 5e-031
Identities = 66/109 (60%), Positives = 71/109 (65%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +ILM NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 431 TATANPRIANGTKNCKILMINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 252
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSL 532
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L
Sbjct: 251 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL 105
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 276 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 115
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 116 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 277
Score = 46.0 bits (94), Expect = 3e-004
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = -3 / +3
Query: 532 QGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVL 359
Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +L
Sbjct: 105 QQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPIL 278
Score = 31.8 bits (63), Expect = 5.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
CA HL+N H Q H L G P+ H TP +*+ASS
Sbjct: 244 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASS 113
>gb|DR081229.1|DR081229 RTFEPL1_28_F08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_F08_A029 3', mRNA sequence
Length = 667
Score = 220 bits (474), Expect = 1e-056
Identities = 87/113 (76%), Positives = 99/113 (87%)
Frame = -1 / +2
Query: 525 DCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEI 346
DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDVGHS+TAR MMD+Y +GEI
Sbjct: 8 DCWLVIGGKVYDVTHFLEEHPGGDEVLLSATGKDATDDFEDVGHSTTAREMMDQYYIGEI 187
Query: 345 DAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
D +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILGLAVAVR YTK+
Sbjct: 188 DPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILGLAVAVRFYTKT 346
Score = 130 bits (278), Expect = 1e-029
Identities = 64/109 (58%), Positives = 70/109 (64%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 327 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 148
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSL 532
V+LCPTSSKSSVASL V D VT YT PPMTSQQS L
Sbjct: 147 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKKWVTSYTFPPMTSQQSLL 1
Score = 58.8 bits (122), Expect = 4e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QK+G+I+HL+ +D+PA
Sbjct: 172 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKMGNIIHLSTNDKPA 11
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 12 AGLSLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 173
Score = 44.1 bits (90), Expect = 0.001
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -3 / +1
Query: 532 QGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVL 359
Q LLA H +GV C G +P RR* + + + Q C R F RC AQ H +DG +L
Sbjct: 1 QQGLLACHWWKGV*CYPFFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPIL 174
Score = 32.2 bits (64), Expect = 3.8
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
CA HL+N H Q H L G P+ H TP +*+ASS
Sbjct: 140 CAQHLQNRLLHLCQLLITALHLLLGVLPKNG*HHTPFHQ*QASS 9
>gb|BF777460.1|BF777460 NXSI_071_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_071_H02 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 443
Score = 219 bits (472), Expect = 2e-056
Identities = 88/126 (69%), Positives = 102/126 (80%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 52 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 231
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P K HY DKT EF+I+ILQFLVPLAI G
Sbjct: 232 GHSTTAREMMDQYYIGEIDPSTFPKKXTYKPAKXXHYXXDKTSEFIIRILQFLVPLAIXG 411
Query: 219 LAVAVR 202
L VA R
Sbjct: 412 LXVAXR 429
Score = 134 bits (287), Expect = 7e-031
Identities = 67/117 (57%), Positives = 74/117 (63%)
Frame = +2 / -1
Query: 209 ATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAV 388
AT P IA GTKN +IL+ NS VLS *C L G+Y +G V SISP Y SII+ AV
Sbjct: 422 ATXNPXIANGTKNCKILIINSEVLSXS*CXXLAGLYVXFLGNVEGSISPM*YWSIISLAV 243
Query: 389 LLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 242 VLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 72
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 270 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 109
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 110 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 271
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 90 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 269
Query: 361 L 359
L
Sbjct: 270 L 272
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 238 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 80
>gb|DR387087.1|DR387087 RTHG1_19_G09.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_19_G09_A029 3', mRNA sequence
Length = 646
Score = 215 bits (463), Expect = 3e-055
Identities = 85/113 (75%), Positives = 97/113 (85%)
Frame = -1 / +3
Query: 525 DCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEI 346
DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDVGHS+TAR MMD+Y +GEI
Sbjct: 18 DCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDVGHSTTAREMMDQYYIGEI 197
Query: 345 DAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
D +T P K Y P KQ HY+QDKT EF I+ILQFLVPL I GLAVAVR YTK+
Sbjct: 198 DPSTFPKKATYKPVKQAHYDQDKTSEFFIRILQFLVPLGIFGLAVAVRFYTKT 356
Score = 127 bits (271), Expect = 1e-028
Identities = 64/109 (58%), Positives = 69/109 (63%)
Frame = +2 / -1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P I GTKN +ILM NS VLS * CL G+Y +G V SISP Y SII+ A
Sbjct: 337 TATANPKIPNGTKNCKILMKNSEVLS*S*WACLTGLYVAFLGNVEGSISPM*YWSIISLA 158
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSL 532
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L
Sbjct: 157 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL 11
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 182 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 21
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 22 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 183
Score = 46.0 bits (94), Expect = 3e-004
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = -3 / +2
Query: 532 QGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVL 359
Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +L
Sbjct: 11 QQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPIL 184
Score = 31.8 bits (63), Expect = 5.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
CA HL+N H Q H L G P+ H TP +*+ASS
Sbjct: 150 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASS 19
>gb|BF778525.1|BF778525 NXSI_085_G03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_085_G03 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 472
Score = 213 bits (459), Expect = 1e-054
Identities = 86/125 (68%), Positives = 100/125 (80%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 91 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 270
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P K Y P K HY DKT EF+I+IL LVPLAILG
Sbjct: 271 GHSTTAREMMDQYYIGEIDPSTFPKKXTYKPAKXXHYXXDKTSEFIIRILXXLVPLAILG 450
Query: 219 LAVAV 205
VAV
Sbjct: 451 XXVAV 465
Score = 132 bits (283), Expect = 2e-030
Identities = 67/118 (56%), Positives = 74/118 (62%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TAT P IA GTK +IL+ NS VLS *C L G+Y +G V SISP Y SII+ A
Sbjct: 464 TATXXPRIANGTKXXKILIINSEVLSXS*CXXLAGLYVXFLGNVEGSISPM*YWSIISLA 285
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V+LCPTSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 284 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 111
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 309 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 148
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 149 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 310
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 129 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 308
Query: 361 L 359
L
Sbjct: 309 L 311
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 277 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 119
>gb|BX254505.1|BX254505 BX254505 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP099D10 similar to CYTOCHROME B5, mRNA
sequence
Length = 588
Score = 209 bits (451), Expect = 2e-053
Identities = 84/111 (75%), Positives = 96/111 (86%)
Frame = -1 / +3
Query: 519 WLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEIDA 340
WLVIGGKV +VT FLE+HPGGD+VLLS+T KDATDDFEDVGHS+TAR MMD+Y +GEID
Sbjct: 6 WLVIGGKVCDVTNFLEEHPGGDEVLLSATGKDATDDFEDVGHSTTAREMMDQYYIGEIDP 185
Query: 339 ATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
+T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILGLAVAVR YTK+
Sbjct: 186 STFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILGLAVAVRFYTKT 338
Score = 121 bits (259), Expect = 5e-027
Identities = 59/104 (56%), Positives = 67/104 (64%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 319 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 140
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTS 517
V+LCPTSSKSSVASL V D LVT +T PP+TS
Sbjct: 139 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKKLVTSHTFPPITS 8
Score = 55.1 bits (114), Expect = 5e-007
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEP 519
I+ ++ VLVHH VP+IF+II I S Q+ I+S V QK+G+I HL+ +++P
Sbjct: 182 IDFSNVVLVHHLPSRGTVPNIFKIICCIFASC**QHFISSWVFFQKIGNITHLSTNNKP 6
Score = 47.3 bits (97), Expect = 1e-004
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -2 / +1
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
RC M P FW+ T E M C L +M MI KM GT +*WT+T
Sbjct: 25 RCVMLPIFWKNTQEEMKCCYQQLAKMQQMILKMLGTVPRLGR*WTNT 165
Score = 43.7 bits (89), Expect = 0.001
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = -3 / +2
Query: 502 QGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVL 359
+GV C Q G +P RR* + + + Q C R*F RC AQ H +DG +L
Sbjct: 23 KGV*CYQFFGRTPRRR*SAVISNWQRCNR*F*RCWAQYHG*GDDGPIL 166
Score = 38.6 bits (78), Expect = 0.044
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RAS 521
CA HL+NH H Q H L G P+ W H TP +*+A+
Sbjct: 132 CAQHLQNHLLHLCQLLITALHLLLGVLPKNW*HHTPFHQ*QAT 4
>gb|BF777931.1|BF777931 NXSI_079_A05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_079_A05 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 413
Score = 204 bits (441), Expect = 4e-052
Identities = 82/120 (68%), Positives = 96/120 (80%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 52 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 231
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TAR MMD+Y +GEID +T P Y P K HY KT EF+I+ILQ LVPLAILG
Sbjct: 232 GHSTTAREMMDQYYIGEIDPSTFPKXXTYKPAKXXHYXXXKTSEFIIRILQXLVPLAILG 411
Score = 124 bits (265), Expect = 7e-028
Identities = 63/113 (55%), Positives = 70/113 (61%)
Frame = +2 / -1
Query: 221 PSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCP 400
P IA GTK +IL+ NS VL *C L G+Y +G V SISP Y SII+ AV+LCP
Sbjct: 410 PRIANGTKXCKILIINSEVLXXS*CXXLAGLYVXXLGNVEGSISPM*YWSIISLAVVLCP 231
Query: 401 TSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
TSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 230 TSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 72
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 270 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 109
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 110 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 271
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 90 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 269
Query: 361 L 359
L
Sbjct: 270 L 272
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 238 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 80
>gb|BQ697198.1|BQ697198 NXPV_050_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_050_F10 5' similar to Arabidopsis
thaliana sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 427
Score = 204 bits (441), Expect = 4e-052
Identities = 82/118 (69%), Positives = 95/118 (80%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 70 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 249
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAI 226
GHS+TAR MMD+Y +GEID +T P Y P KQ HY KT EF+I ILQFLVPLAI
Sbjct: 250 GHSTTAREMMDQYYIGEIDPSTFPKXXTYKPAKQXHYXXXKTSEFIIXILQFLVPLAI 423
Score = 125 bits (267), Expect = 4e-028
Identities = 62/111 (55%), Positives = 69/111 (62%)
Frame = +2 / -3
Query: 227 IARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTS 406
IA GTKN + + NS VL *C CL G+Y +G V SISP Y SII+ AV+LCPTS
Sbjct: 422 IANGTKNCKXXIINSEVLXXS*CXCLAGLYVXXLGNVEGSISPM*YWSIISLAVVLCPTS 243
Query: 407 SKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
SKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 242 SKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 90
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 288 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 127
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 128 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 289
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 108 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 287
Query: 361 L 359
L
Sbjct: 288 L 290
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 256 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 98
>gb|BQ697618.1|BQ697618 NXPV_058_G06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_058_G06 5' similar to Arabidopsis
thaliana sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 395
Score = 204 bits (440), Expect = 5e-052
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 35 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 214
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILG 220
GHS+TA MMD+Y +GEID +T P Y P HY DKT EF+I ILQFLVPLAILG
Sbjct: 215 GHSTTAXEMMDQYYIGEIDPSTFPKXXTYKPAXXXHYXXDKTSEFIIXILQFLVPLAILG 394
Score = 125 bits (268), Expect = 3e-028
Identities = 63/113 (55%), Positives = 70/113 (61%)
Frame = +2 / -3
Query: 221 PSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCP 400
P IA GTKN + + NS VLS *C L G+Y +G V SISP Y SII+ AV+LCP
Sbjct: 393 PRIANGTKNCKXXIINSEVLSXS*CXXLAGLYVXFLGNVEGSISPM*YWSIISXAVVLCP 214
Query: 401 TSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
TSSKSSVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 213 TSSKSSVASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 55
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 253 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 92
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 93 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 254
Score = 49.6 bits (102), Expect = 2e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 73 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHGXGDDGPI 252
Query: 361 L 359
L
Sbjct: 253 L 255
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 221 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 63
>gb|DR081312.1|DR081312 RTFEPL1_28_F08.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_F08_A029 5', mRNA sequence
Length = 468
Score = 200 bits (432), Expect = 7e-051
Identities = 78/111 (70%), Positives = 92/111 (82%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 135 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTHFLEEHPGGDEVLLSATGKDATDDFEDV 314
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQ 247
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQ
Sbjct: 315 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQ 467
Score = 116 bits (247), Expect = 2e-025
Identities = 58/103 (56%), Positives = 65/103 (63%)
Frame = +2 / -3
Query: 251 RILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVASL 430
+IL+ NS VLS *C CL G+Y +G V SISP Y SII+ AV+LCPTSSKSSVASL
Sbjct: 463 KILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLAVVLCPTSSKSSVASL 284
Query: 431 AVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V D VT YT PPMTSQQS L LC TS+R
Sbjct: 283 PVADNSTSSPPGCSSKKWVTSYTFPPMTSQQSLL*LCSETSAR 155
Score = 58.8 bits (122), Expect = 4e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QK+G+I+HL+ +D+PA
Sbjct: 353 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKMGNIIHLSTNDKPA 192
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 193 AGLSLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 354
Score = 46.9 bits (96), Expect = 1e-004
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 173 AQLQQGLLACHWWKGV*CYPFFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 352
Query: 361 L 359
L
Sbjct: 353 L 355
Score = 35.0 bits (70), Expect = 0.56
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 321 CAQHLQNRLLHLCQLLITALHLLLGVLPKNG*HHTPFHQ*QASSPCCNCAQRP 163
>gb|CO159491.1|CO159491 FLD1_14_A02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_A02_A029 3', mRNA sequence
Length = 668
Score = 198 bits (427), Expect = 3e-050
Identities = 77/110 (70%), Positives = 91/110 (82%)
Frame = -1 / -1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 332 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTHFLEEHPGGDEVLLSATGKDATDDFEDV 153
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKIL 250
GHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+IL
Sbjct: 152 GHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRIL 3
Score = 116 bits (247), Expect = 2e-025
Identities = 58/103 (56%), Positives = 65/103 (63%)
Frame = +2 / +1
Query: 251 RILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVASL 430
+IL+ NS VLS *C CL G+Y +G V SISP Y SII+ AV+LCPTSSKSSVASL
Sbjct: 4 KILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLAVVLCPTSSKSSVASL 183
Query: 431 AVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
V D VT YT PPMTSQQS L LC TS+R
Sbjct: 184 PVADNSTSSPPGCSSKKWVTSYTFPPMTSQQSLL*LCSETSAR 312
Score = 58.8 bits (122), Expect = 4e-008
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / +3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QK+G+I+HL+ +D+PA
Sbjct: 114 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKMGNIIHLSTNDKPA 275
Score = 48.3 bits (99), Expect = 6e-005
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -2 / -2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 274 AGLSLVERCMMLPIFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 113
Score = 46.9 bits (96), Expect = 1e-004
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = -3 / -3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 294 AQLQQGLLACHWWKGV*CYPFFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 115
Query: 361 L 359
L
Sbjct: 114 L 112
Score = 35.0 bits (70), Expect = 0.56
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / +2
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 146 CAQHLQNRLLHLCQLLITALHLLLGVLPKNG*HHTPFHQ*QASSPCCNCAQRP 304
>gb|BF777300.1|BF777300 NXSI_067_E07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_067_E07 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 403
Score = 193 bits (417), Expect = 8e-049
Identities = 77/103 (74%), Positives = 90/103 (87%)
Frame = -1 / +1
Query: 495 YNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEIDAATIPTKVK 316
Y+VT+FLE+HPGGD+VLLS+T KDATDDFEDVGHS+TAR MMD+Y +GEID +T P K
Sbjct: 1 YDVTQFLEEHPGGDEVLLSATGKDATDDFEDVGHSTTAREMMDQYYIGEIDPSTFPKKAT 180
Query: 315 YTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
Y P KQ HY+QDKT EF+I+ILQFLVPLAILGLAVAVR YTK+
Sbjct: 181 YKPAKQAHYDQDKTSEFIIRILQFLVPLAILGLAVAVRFYTKT 309
Score = 108 bits (230), Expect = 5e-023
Identities = 54/95 (56%), Positives = 60/95 (63%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 290 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 111
Query: 386 VLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVT 490
V+LCPTSSKSSVASL V D N VT
Sbjct: 110 VVLCPTSSKSSVASLPVADNSTSSPPGCSSKNWVT 6
Score = 45.1 bits (92), Expect = 5e-004
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIV 495
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+
Sbjct: 135 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNII 1
Score = 39.6 bits (80), Expect = 0.023
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -2 / +2
Query: 491 M*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 5 MLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 136
Score = 37.3 bits (75), Expect = 0.11
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3 / +3
Query: 490 CDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVL 359
C + G +P RR* + + + Q C R F RC AQ H +DG +L
Sbjct: 6 CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPIL 137
>gb|BG317490.1|BG317490 NXPV_002_D10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_002_D10 5' similar to Arabidopsis
thaliana sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 408
Score = 191 bits (412), Expect = 4e-048
Identities = 76/113 (67%), Positives = 89/113 (78%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 70 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 249
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFL 241
GHS+TAR MMD+Y +GEID +T P Y P K HY KT EF+I ILQFL
Sbjct: 250 GHSTTAREMMDQYYIGEIDPSTFPKXXTYKPAKXXHYXXXKTSEFIIXILQFL 408
Score = 111 bits (237), Expect = 5e-024
Identities = 57/106 (53%), Positives = 64/106 (60%)
Frame = +2 / -2
Query: 242 KNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSV 421
KN + + NS VL *C L G+Y +G V SISP Y SII+ AV+LCPTSSKSSV
Sbjct: 407 KNCKXXIINSEVLXXS*CXXLAGLYVXXLGNVEGSISPM*YWSIISLAVVLCPTSSKSSV 228
Query: 422 ASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
ASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 227 ASLPVADNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 90
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 288 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 127
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 128 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 289
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 108 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 287
Query: 361 L 359
L
Sbjct: 288 L 290
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 256 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 98
>gb|BG040829.1|BG040829 NXSI_115_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_115_F01 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 325
Score = 185 bits (398), Expect = 3e-046
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 4 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 183
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVI 259
GHS+TAR MMD+Y +GEID +T P Y P K HY DKT EF+I
Sbjct: 184 GHSTTAREMMDQYYIGEIDPSTFPKXXTYKPAKXAHYXXDKTSEFII 324
Score = 109 bits (233), Expect = 2e-023
Identities = 56/98 (57%), Positives = 61/98 (62%)
Frame = +2 / -3
Query: 266 NSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVASLAVEDX 445
NS VLS *C L G+Y +G V SISP Y SII+ AV+LCPTSSKSSVASL V D
Sbjct: 317 NSEVLSXS*CAXLAGLYVXXLGNVEGSISPM*YWSIISLAVVLCPTSSKSSVASLPVADN 138
Query: 446 XXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
N VT YT PPMTSQQS L LC TS+R
Sbjct: 137 STSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 24
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -2
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 222 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 61
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 62 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 223
Score = 48.7 bits (100), Expect = 4e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +3
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 42 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHG*GDDGPI 221
Query: 361 L 359
L
Sbjct: 222 L 224
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -1
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 190 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 32
>gb|DT637619.1|DT637619 EST1152550 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH569 3' end, mRNA sequence
Length = 834
Score = 150 bits (322), Expect(2) = 6e-046
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -1 / +1
Query: 429 KDATDDFEDVGHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKIL 250
KDATDDFEDVGHS +ARAMMDEY VG+ID +++P+K KYTP KQ YN DK+ EF+IKIL
Sbjct: 265 KDATDDFEDVGHSDSARAMMDEYYVGDIDPSSVPSKPKYTPAKQAPYNPDKSSEFIIKIL 444
Query: 249 QFLVPLAILGLAVAVRMYTKS 187
QFLVPL ILGLAVAVR YTKS
Sbjct: 445 QFLVPLLILGLAVAVRYYTKS 507
Score = 97.3 bits (206), Expect(2) = 8e-025
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = +2 / -2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 506 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTDEGSMSPT*YS 327
Query: 368 SIIARAVLLCPTSSKSSVASL 430
SIIA A+ LCPTSSKSSVASL
Sbjct: 326 SIIALALSLCPTSSKSSVASL 264
Score = 54.2 bits (112), Expect(2) = 6e-046
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKV 496
S +KVY LE+V++HNT DCW+VIGGKV
Sbjct: 182 SDAKVYKLEDVSRHNTHQDCWIVIGGKV 265
Score = 36.3 bits (73), Expect(2) = 8e-025
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2 / -1
Query: 491 LYTLPPMTSQQSSLVLCLATSSRVYTLDPDILV 589
++T PP+T QQS VLCL TSS + TL + ++
Sbjct: 270 IFTFPPITIQQS**VLCLETSSSL*TLASEAIL 172
>gb|DR692925.1|DR692925 EST1083013 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADR96 3' end, mRNA sequence
Length = 663
Score = 149 bits (321), Expect(2) = 8e-046
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = -1 / +2
Query: 429 KDATDDFEDVGHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKIL 250
KDATDDFEDVGHS +ARAMMDEY VG+ID + +P+K KYTP KQ YN DK+ EF+IKIL
Sbjct: 257 KDATDDFEDVGHSDSARAMMDEYYVGDIDPSAVPSKPKYTPAKQAPYNPDKSSEFIIKIL 436
Query: 249 QFLVPLAILGLAVAVRMYTKS 187
QFLVPL ILGLAVAVR YTKS
Sbjct: 437 QFLVPLLILGLAVAVRYYTKS 499
Score = 98.7 bits (209), Expect(2) = 3e-025
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = +2 / -1
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 498 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFEGTAEGSMSPT*YS 319
Query: 368 SIIARAVLLCPTSSKSSVASL 430
SIIA A+ LCPTSSKSSVASL
Sbjct: 318 SIIALALSLCPTSSKSSVASL 256
Score = 54.2 bits (112), Expect(2) = 8e-046
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKV 496
S +KVY LE+V++HNT DCW+VIGGKV
Sbjct: 174 SDAKVYKLEDVSRHNTHQDCWIVIGGKV 257
Score = 36.3 bits (73), Expect(2) = 3e-025
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2 / -3
Query: 491 LYTLPPMTSQQSSLVLCLATSSRVYTLDPDILV 589
++T PP+T QQS VLCL TSS + TL + ++
Sbjct: 262 IFTFPPITIQQS**VLCLETSSSL*TLASEAIL 164
>gb|BQ291219.1|BQ291219 NXRV057_D08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV057_D08 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 550
Score = 183 bits (395), Expect = 8e-046
Identities = 72/116 (62%), Positives = 89/116 (76%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 194 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSTTGKDATDDFEDV 373
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPL 232
GHS+TAR MMD+Y +GEI+ +T+ K Y P K HY+Q EF+I L VP+
Sbjct: 374 GHSTTAREMMDQYYIGEINPSTLXKKATYKPAKHAHYDQXXXXEFIIXXLXXXVPM 541
Score = 106 bits (227), Expect = 1e-022
Identities = 55/108 (50%), Positives = 62/108 (57%)
Frame = +2 / -2
Query: 236 GTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTSSKS 415
GT + + NS S *C CL G+Y + V ISP Y SII+ AV+LCPTSSKS
Sbjct: 537 GTXXCKXXIINSXXXS*S*CACLAGLYVAFLXNVEGFISPM*YWSIISLAVVLCPTSSKS 358
Query: 416 SVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
SVASL V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 357 SVASLPVVDNSTSSPPGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 214
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 412 VLVHHLPSRGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 251
Score = 49.6 bits (102), Expect = 2e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 252 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPRLGR*WTNT 413
Score = 48.3 bits (99), Expect = 6e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +1
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 232 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVINNWQRCNRRF*RCWAQYHG*GDDGPI 411
Query: 361 L 359
L
Sbjct: 412 L 414
Score = 34.5 bits (69), Expect = 0.77
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3 / -3
Query: 393 CAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
CA HL+N H Q H L G P+ H TP +*+ASS CA P
Sbjct: 380 CAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNCAQRP 222
>gb|DR689603.1|DR689603 EST1079689 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACK71 3' end, mRNA sequence
Length = 506
Score = 181 bits (390), Expect = 4e-045
Identities = 74/97 (76%), Positives = 84/97 (86%)
Frame = -1 / +2
Query: 477 LEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQ 298
LEDHPGGD+VL+S+T KDATDDFEDVGHS +ARAMMDEY VG+ID +++P K KYTP KQ
Sbjct: 5 LEDHPGGDEVLISATGKDATDDFEDVGHSDSARAMMDEYYVGDIDPSSVPPKPKYTPAKQ 184
Query: 297 PHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
YN DK+ EF+IKILQFLVPL ILGLAVAVR YTKS
Sbjct: 185 APYNPDKSSEFIIKILQFLVPLLILGLAVAVRYYTKS 295
Score = 98.7 bits (209), Expect = 4e-020
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2 / -3
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYS 367
DLV TATA+P ++ GT+N +I M NS LS L CL GVYF G S+SPT YS
Sbjct: 294 DLV**RTATAKPKMSNGTRNCKIFMINSDDLSGLYGACLAGVYFGFGGTDEGSMSPT*YS 115
Query: 368 SIIARAVLLCPTSSKSSVASLAVED 442
SIIA A+ LCPTSSKSSVASL V +
Sbjct: 114 SIIALALSLCPTSSKSSVASLPVAE 40
Score = 41.8 bits (85), Expect = 0.005
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = +1 / -2
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQK 480
I ++H + +HH + + + +IF++IG I S Q+ I++R++LQ+
Sbjct: 139 IYVSHVIFIHHSSSTITMSNIFKVIGCIFTSC*DQHFISARMVLQR 2
>gb|BQ699400.1|BQ699400 NXRV127_D01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV127_D01 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 410
Score = 99.6 bits (211), Expect(3) = 2e-041
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -1 / +1
Query: 501 KVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVG 352
KVY+VTKFLEDHPGGD+VL+S+T KDATDDF GHS +ARAMMDEY VG
Sbjct: 94 KVYDVTKFLEDHPGGDEVLISATGKDATDDFAXXGHSDSARAMMDEYYVG 243
Score = 72.5 bits (152), Expect(3) = 2e-041
Identities = 32/48 (66%), Positives = 34/48 (70%)
Frame = -1 / +3
Query: 330 PTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
P TP KQ YN DK+ EF+IK QFLVPL ILGLAVAVR YTKS
Sbjct: 267 PRSQXXTPAKQAPYNPDKSPEFIIKXXQFLVPLLILGLAVAVRYYTKS 410
Score = 54.2 bits (112), Expect(2) = 2e-015
Identities = 31/73 (42%), Positives = 35/73 (47%)
Frame = +2 / -1
Query: 353 PTKYSSIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSL 532
PT YSSIIA A+ LCP +KSSVASL V + NLVT YT S
Sbjct: 242 PT*YSSIIALALSLCPXXAKSSVASLPVAEINTSSPPGWSSKNLVTSYTFLQSLSSNPDE 63
Query: 533 VLCLATSSRVYTL 571
L S + TL
Sbjct: 62 CYVLEXXSSL*TL 24
Score = 47.8 bits (98), Expect(2) = 2e-015
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +2 / -2
Query: 188 DLVYILTATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVG 331
DLV TATA+P ++ GT+N I M NS LS L CL GV F L G
Sbjct: 409 DLV**RTATAKPKMSNGTRNCXIFMINSGDLSGLYGACLAGVXFWLRG 266
Score = 46.0 bits (94), Expect(2) = 5e-005
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVH 498
H + +HH + + + ++IG I S Q+ I++R++LQK G+I+H
Sbjct: 240 HVIFIHHSSSTVTMSXXXKVIGCIFTSC*DQHFISARMVLQKFGYIIH 97
Score = 35.4 bits (71), Expect(3) = 2e-041
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 540 HNTKDDCWLVIGGK 499
HNT DCW+VIGGK
Sbjct: 56 HNTHQDCWIVIGGK 97
Score = 31.8 bits (63), Expect = 5.2
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -3 / +3
Query: 502 QGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVLSG*D*CSHDTHQ 323
+ V C+Q+ GG WRR* + + C R* C DG +L G * H +
Sbjct: 93 ESV*CNQIFGGPSWRR*SVDLSNW*RCNR*LCXXWT**QC*SYDG*ILRGQT*IPHQFPR 272
Query: 322 GEVHAPQAAA 293
+ P A
Sbjct: 273 SQXXTPAKQA 302
Score = 31.3 bits (62), Expect = 7.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2 / +2
Query: 500 RCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*W 354
+C M*P+FWR L M L +M PM + *W + W
Sbjct: 95 KCMM*PNFWRTILAEMKC*SQQLVKMQPMTLXXLDIVTVLEL*WMNITW 241
Score = 21.7 bits (41), Expect(2) = 5e-005
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -3
Query: 503 PPMTSQQSSLVLC 541
PP+T QQS VLC
Sbjct: 93 PPITIQQS**VLC 55
>gb|AW755006.1|AW755006 PC09E04 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC09E04, mRNA sequence
Length = 502
Score = 163 bits (351), Expect = 1e-039
Identities = 64/97 (65%), Positives = 75/97 (77%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HPGGD+VLLS+T KDATDDFEDV
Sbjct: 210 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPGGDEVLLSATGKDATDDFEDV 389
Query: 399 GHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHY 289
GHS+T R MMD+Y ID +T P K Y P K HY
Sbjct: 390 GHSTTXREMMDQYYXXXIDPSTFPKKXTYXPAKXXHY 500
Score = 94.1 bits (199), Expect = 9e-019
Identities = 48/90 (53%), Positives = 52/90 (57%)
Frame = +2 / -1
Query: 290 *CGCLGGVYFTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXX 469
*C L G Y +G V SI Y SII+ V+LCPTSSKSSVASL V D
Sbjct: 499 *CXXLAGXYVXFLGNVEGSIXXM*YWSIISLXVVLCPTSSKSSVASLPVADNSTSSPPGC 320
Query: 470 XXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
N VT YT PPMTSQQS L LC TS+R
Sbjct: 319 SSKNWVTSYTFPPMTSQQSLL*LCSETSAR 230
Score = 59.7 bits (124), Expect = 2e-008
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1 / -3
Query: 361 VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
VLVHH VP+IF+I+ I S Q+ I+S V QKLG+I+HL+ +D+PA
Sbjct: 428 VLVHHLPXXGTVPNIFKIVCCIFASC**QHFISSWVFFQKLGNIIHLSTNDKPA 267
Score = 50.6 bits (104), Expect = 1e-005
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST 360
AG S RC M P+FW+ T E M C L +M I KM GT +*WT+T
Sbjct: 268 AGLSLVERCMMLPNFWKNTQEEMKCCYQQLAKMQQTILKMLGTVPXXGR*WTNT 429
Score = 49.2 bits (101), Expect = 3e-005
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -3 / +2
Query: 541 AQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRV 362
AQ Q LLA H +GV C + G +P RR* + + + Q C R F RC AQ H +DG +
Sbjct: 248 AQLQQGLLACHWWKGV*CYPIFGRTPRRR*SAVISNWQRCNRRF*RCWAQYHX*GDDGPI 427
Query: 361 L 359
L
Sbjct: 428 L 430
Score = 35.4 bits (71), Expect = 0.41
Identities = 24/64 (37%), Positives = 28/64 (43%)
Frame = +3 / -2
Query: 360 STRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCC 539
S PS CA HL+N H Q H L G P+ H TP +*+ASS C
Sbjct: 429 SIGPSSPXXWYCAQHLQNRLLHLCQLLITALHLLLGVLPKIG*HHTPFHQ*QASSPCCNC 250
Query: 540 AWPP 551
A P
Sbjct: 249 AQRP 238
>gb|BX678446.1|BX678446 BX678446 RS Pinus pinaster cDNA clone RS09C03, mRNA sequence
Length = 513
Score = 120 bits (256), Expect(2) = 5e-036
Identities = 44/68 (64%), Positives = 56/68 (82%)
Frame = -1 / +1
Query: 525 DCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEI 346
DCWL+I GKVY+VT +LE+HPGGD+VLL +T KDATDDFED GHS+TAR M+EY +G+
Sbjct: 1 DCWLIIDGKVYDVTNYLEEHPGGDEVLLLATGKDATDDFEDAGHSNTARETMEEYYIGDF 180
Query: 345 DAATIPTK 322
D ++I K
Sbjct: 181 DPSSISLK 204
Score = 65.7 bits (137), Expect(2) = 4e-014
Identities = 35/64 (54%), Positives = 37/64 (57%)
Frame = +2 / -2
Query: 332 IVAASISPTKYSSIIARAVLLCPTSSKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPM 511
I S SP YSSI++ AVLLCP SSKSSVASL V LVT YTLP M
Sbjct: 194 IEEGSKSPM*YSSIVSLAVLLCPASSKSSVASLPVAKSNTSSPPGCSSK*LVTSYTLPSM 15
Query: 512 TSQQ 523
SQQ
Sbjct: 14 ISQQ 3
Score = 51.0 bits (105), Expect(2) = 5e-036
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = -1 / +1
Query: 309 PPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
P KQ H N KT + V KIL F +PLA LGLA+ V +Y K
Sbjct: 208 PVKQAHNNSGKTVDSVSKILPFAIPLAFLGLAIVVCIYVK 327
Score = 50.6 bits (104), Expect = 1e-005
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +1 / -1
Query: 343 INLTH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
I +++ + H S + IF+II + S +Q+ I+S ++LQ +GHI++LA DD+PA
Sbjct: 183 IEISNVIFFHSFPCSVTMSGIFKIIRCVFASC*KQHFISSWMLLQVIGHIIYLAIDDKPA 4
Score = 50.1 bits (103), Expect = 2e-005
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = -3 / +3
Query: 523 LLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQQHCPCNDGRVL 359
LLA HR QG+ CDQ+ GG+ RR* A + Q *F RC HC N GR+L
Sbjct: 3 LLAYHRWQGI*CDQLLGGASRRR*SVAFSNWQRRNG*F*RCRT**HCKGNYGRIL 167
Score = 43.7 bits (89), Expect = 0.001
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3 / -3
Query: 384 QCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
QC HL+NH Q A H L PP WSH PC R* AS+
Sbjct: 142 QCYYVRHLQNHPLRLCQLLKATLHLLLDAPPSNWSHHIPCHR**ASN 2
Score = 34.1 bits (68), Expect = 1.1
Identities = 21/51 (41%), Positives = 23/51 (45%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*W 369
AG SS AR M*P WR E M C L + MI KM L + W
Sbjct: 5 AGLSSMARYMM*PITWRSIQEEMKCCF*QLAKTQRMILKMPDIVTLQGKLW 157
Score = 31.8 bits (63), Expect(2) = 4e-014
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGG 310
T A+P A+G N +I T S V L C CL G
Sbjct: 311 TTIAKPRKAKGIANGKIFDTESTVFPELLCACLTG 207
>gb|DR688731.1|DR688731 EST1078816 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC989 3' end, mRNA sequence
Length = 782
Score = 121 bits (259), Expect(2) = 1e-032
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 305 MEEIKVVTMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 484
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YLVG ++
Sbjct: 485 VGHSIAAQGMMETYLVGVLE 544
Score = 39.6 bits (80), Expect(2) = 4e-005
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 405 LVTS*TLPPMTNQQSALLLWVETSFMVTTL 316
Score = 38.6 bits (78), Expect(2) = 1e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +2
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 638 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 733
Score = 27.2 bits (53), Expect(2) = 4e-005
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +PT+ SI+ A +L PT SKS VAS
Sbjct: 543 SRTPTR*VSIMPCAAML*PTLSKSWVAS 460
>gb|CO366825.1|CO366825 RTK1_30_H02.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_H02_A029 3', mRNA sequence
Length = 820
Score = 121 bits (258), Expect(2) = 1e-032
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 71 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 250
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 251 VGHSIAAQGMMETYLIGVLE 310
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -2
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 171 LVTS*TLPPMTNQQSALLLWVETSFMVITL 82
Score = 38.6 bits (78), Expect(2) = 1e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +2
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 404 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 499
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 309 SRTPIR*VSIMPCAAML*PTLSKSWVAS 226
>gb|DR684189.1|DR684189 EST1074266 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP87 3' end, mRNA sequence
Length = 820
Score = 121 bits (258), Expect(2) = 1e-032
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 331 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 510
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 511 VGHSIAAQGMMETYLIGVLE 570
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 431 LVTS*TLPPMTNQQSALLLWVETSFMVITL 342
Score = 38.6 bits (78), Expect(2) = 1e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +1
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 664 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 759
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -3
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 569 SRTPIR*VSIMPCAAML*PTLSKSWVAS 486
>gb|DR693720.1|DR693720 EST1083810 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE337 3' end, mRNA sequence
Length = 787
Score = 121 bits (258), Expect(2) = 1e-032
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 305 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 484
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 485 VGHSIAAQGMMETYLIGVLE 544
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -2
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 405 LVTS*TLPPMTNQQSALLLWVETSFMVITL 316
Score = 38.6 bits (78), Expect(2) = 1e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +2
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 638 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 733
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 543 SRTPIR*VSIMPCAAML*PTLSKSWVAS 460
>gb|CO366902.1|CO366902 RTK1_30_H02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_H02_A029 5', mRNA sequence
Length = 776
Score = 121 bits (258), Expect(2) = 1e-032
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 47 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 226
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 227 VGHSIAAQGMMETYLIGVLE 286
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 147 LVTS*TLPPMTNQQSALLLWVETSFMVITL 58
Score = 38.6 bits (78), Expect(2) = 1e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +2
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 380 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 475
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -3
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 285 SRTPIR*VSIMPCAAML*PTLSKSWVAS 202
>gb|CX652496.1|CX652496 COLD1_59_A12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_A12_A029 5', mRNA sequence
Length = 714
Score = 121 bits (258), Expect(2) = 1e-032
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +3
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 36 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 215
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 216 VGHSIAAQGMMETYLIGVLE 275
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 136 LVTS*TLPPMTNQQSALLLWVETSFMVITL 47
Score = 38.6 bits (78), Expect(2) = 1e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 369 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 464
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -3
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 274 SRTPIR*VSIMPCAAML*PTLSKSWVAS 191
>gb|DR120495.1|DR120495 RTMG1_30_C12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_30_C12_A029 3', mRNA sequence
Length = 631
Score = 119 bits (255), Expect(2) = 4e-032
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = -1 / +3
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 18 MEEIKVITMNEVFTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 197
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 198 VGHSIAAQGMMETYLIGVLE 257
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 118 LVTS*TLPPMTNQQSALLLWVKTSFMVITL 29
Score = 38.6 bits (78), Expect(2) = 4e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 351 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 446
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -1
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 256 SRTPIR*VSIMPCAAML*PTLSKSWVAS 173
>gb|DR689284.1|DR689284 EST1079370 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACG50 3' end, mRNA sequence
Length = 695
Score = 119 bits (254), Expect(2) = 5e-032
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = -1 / +3
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++ L+ ++ DAT DFE
Sbjct: 78 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEALIEASGGDATQDFES 257
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 258 VGHSIAAQGMMETYLIGVLE 317
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -2
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 178 LVTS*TLPPMTNQQSALLLWVETSFMVITL 89
Score = 38.6 bits (78), Expect(2) = 5e-032
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 411 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 506
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 316 SRTPIR*VSIMPCAAML*PTLSKSWVAS 233
>gb|DR119465.1|DR119465 RTMG1_23_A05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_A05_A029 5', mRNA sequence
Length = 652
Score = 121 bits (258), Expect(2) = 5e-032
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 226 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 405
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 406 VGHSIAAQGMMETYLIGVLE 465
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 326 LVTS*TLPPMTNQQSALLLWVETSFMVITL 237
Score = 36.8 bits (74), Expect(2) = 5e-032
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMY 196
+D F K+LQFLVPL I+G+A +R +
Sbjct: 559 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSF 648
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -3
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 464 SRTPIR*VSIMPCAAML*PTLSKSWVAS 381
>gb|CF474235.1|CF474235 RTWW2_17_A03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_17_A03_A021 5', mRNA sequence
Length = 731
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +2
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 29 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 208
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 209 DATRDFEDVGHSPAAKGMLDNYLVGVLE 292
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -2
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 280 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 113
Score = 52.8 bits (109), Expect(3) = 5e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -3
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 156 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 37
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 114 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 290
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 155 TWSRCTPCHR*QTSNPPCSCGQKP 84
Score = 35.0 bits (70), Expect(3) = 5e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 318 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 208
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 64 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 156
Score = 23.1 bits (44), Expect(3) = 5e-013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 471 LNRKVAPTITRGTRNSIILM 412
>gb|CO366873.1|CO366873 RTK1_30_E06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_E06_A029 5', mRNA sequence
Length = 736
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +2
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 29 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 208
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 209 DATRDFEDVGHSPAAKGMLDNYLVGVLE 292
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 280 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 113
Score = 52.8 bits (109), Expect(3) = 5e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 156 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 37
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 114 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 290
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 155 TWSRCTPCHR*QTSNPPCSCGQKP 84
Score = 35.0 bits (70), Expect(3) = 5e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 318 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 208
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 64 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 156
Score = 23.1 bits (44), Expect(3) = 5e-013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 471 LNRKVAPTITRGTRNSIILM 412
>gb|CV036477.1|CV036477 RTNACL1_59_B12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_B12_A029 5', mRNA sequence
Length = 786
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +2
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 29 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 208
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 209 DATRDFEDVGHSPAAKGMLDNYLVGVLE 292
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 280 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 113
Score = 52.8 bits (109), Expect(3) = 1e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 156 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 37
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 114 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 290
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -2
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 155 TWSRCTPCHR*QTSNPPCSCGQKP 84
Score = 35.0 bits (70), Expect(3) = 1e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 318 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 208
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 64 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 156
Score = 24.9 bits (48), Expect(3) = 1e-013
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 471 LNRKAAPTITRGTRNSIILM 412
>gb|CV036651.1|CV036651 RTNACL1_60_F04.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_60_F04_A029 5', mRNA sequence
Length = 721
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +2
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 29 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 208
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 209 DATRDFEDVGHSPAAKGMLDNYLVGVLE 292
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 280 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 113
Score = 52.8 bits (109), Expect(3) = 1e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 156 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 37
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 114 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 290
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 155 TWSRCTPCHR*QTSNPPCSCGQKP 84
Score = 35.0 bits (70), Expect(3) = 1e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 318 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 208
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 64 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 156
Score = 24.9 bits (48), Expect(3) = 1e-013
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 471 LNRKAAPTITRGTRNSIILM 412
>gb|DR011689.1|DR011689 HEAT1_7_F11.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_7_F11_A029 3', mRNA sequence
Length = 645
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +1
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 46 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 225
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 226 DATRDFEDVGHSPAAKGMLDNYLVGVLE 309
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 297 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 130
Score = 52.8 bits (109), Expect(3) = 5e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 173 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 54
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 131 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 307
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 172 TWSRCTPCHR*QTSNPPCSCGQKP 101
Score = 35.0 bits (70), Expect(3) = 5e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 335 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 225
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 81 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 173
Score = 23.1 bits (44), Expect(3) = 5e-013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 488 LNRKVAPTITRGTRNSIILM 429
>gb|DR011768.1|DR011768 HEAT1_7_F11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_7_F11_A029 5', mRNA sequence
Length = 615
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +1
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 16 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 195
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 196 DATRDFEDVGHSPAAKGMLDNYLVGVLE 279
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 267 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 100
Score = 52.8 bits (109), Expect(3) = 5e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 143 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 24
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 101 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 277
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 142 TWSRCTPCHR*QTSNPPCSCGQKP 71
Score = 35.0 bits (70), Expect(3) = 5e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 305 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 195
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 51 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 143
Score = 23.1 bits (44), Expect(3) = 5e-013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 458 LNRKVAPTITRGTRNSIILM 399
>gb|DR019319.1|DR019319 STRS1_29_E04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_29_E04_A034 3', mRNA sequence
Length = 892
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / -1
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 844 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 665
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 664 DATRDFEDVGHSPAAKGMLDNYLVGVLE 581
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / +2
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 593 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 760
Score = 52.8 bits (109), Expect(3) = 1e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / +3
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 717 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 836
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / -2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 759 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 583
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / +1
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 718 TWSRCTPCHR*QTSNPPCSCGQKP 789
Score = 35.0 bits (70), Expect(3) = 1e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / +3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 555 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 665
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 809 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 717
Score = 24.9 bits (48), Expect(3) = 1e-013
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 402 LNRKAAPTITRGTRNSIILM 461
>gb|DR054781.1|DR054781 RTCA1_19_C01.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_19_C01_A029 5', mRNA sequence
Length = 724
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +3
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 39 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 218
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 219 DATRDFEDVGHSPAAKGMLDNYLVGVLE 302
Score = 68.9 bits (144), Expect = 3e-011
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S V LQ+LGH+VHLA DD+PA
Sbjct: 290 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWVFLQELGHVVHLATDDKPA 123
Score = 52.8 bits (109), Expect(3) = 1e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 166 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 47
Score = 49.2 bits (101), Expect = 3e-005
Identities = 26/69 (37%), Positives = 31/69 (44%)
Frame = +3 / -2
Query: 345 QSHPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
Q P S+ P+ CA L+N HP E L G TWS CTPC R*+ S+
Sbjct: 300 QERPPSSYPASPWPLGCAQRLQNPWWHPVLRPPPELPPLLGVLAGTWSRCTPCHR*QTSN 121
Query: 525 RPWCCAWPP 551
P C P
Sbjct: 120 PPCSCGQKP 94
Score = 47.3 bits (97), Expect = 1e-004
Identities = 27/59 (45%), Positives = 29/59 (49%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + T E F P M P I K GTA P W +T W L
Sbjct: 124 AGLSSVARCTT*PSSCKNTQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 300
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = -3 / +2
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWR 458
Q V + G Q QG LL HR QGVQ DQV +P R
Sbjct: 74 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQVPARTPRR 187
Score = 35.0 bits (70), Expect(3) = 1e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 328 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 218
Score = 24.9 bits (48), Expect(3) = 1e-013
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 481 LNRKAAPTITRGTRNSIILM 422
>gb|DR059746.1|DR059746 RTNIT1_19_C01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_19_C01_A029 5', mRNA sequence
Length = 660
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +1
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 13 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 192
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 193 DATRDFEDVGHSPAAKGMLDNYLVGVLE 276
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 264 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 97
Score = 52.8 bits (109), Expect(3) = 5e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 140 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 21
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 98 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 274
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 139 TWSRCTPCHR*QTSNPPCSCGQKP 68
Score = 35.0 bits (70), Expect(3) = 5e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 302 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 192
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 48 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 140
Score = 23.1 bits (44), Expect(3) = 5e-013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 455 LNRKVAPTITRGTRNSIILM 396
>gb|DR089772.1|DR089772 RTAL1_10_E10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_E10_A029 5', mRNA sequence
Length = 607
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +3
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 57 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 236
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 237 DATRDFEDVGHSPAAKGMLDNYLVGVLE 320
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 308 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 141
Score = 52.8 bits (109), Expect(3) = 5e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 184 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 65
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 142 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 318
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -2
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 183 TWSRCTPCHR*QTSNPPCSCGQKP 112
Score = 35.0 bits (70), Expect(3) = 5e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 346 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 236
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +2
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 92 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 184
Score = 23.1 bits (44), Expect(3) = 5e-013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -1
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 499 LNRKVAPTITRGTRNSIILM 440
>gb|DR119693.1|DR119693 RTMG1_24_G10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_24_G10_A029 5', mRNA sequence
Length = 683
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / +3
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 42 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 221
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 222 DATRDFEDVGHSPAAKGMLDNYLVGVLE 305
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 293 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 126
Score = 52.8 bits (109), Expect(3) = 1e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 169 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 50
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 127 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 303
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 168 TWSRCTPCHR*QTSNPPCSCGQKP 97
Score = 35.0 bits (70), Expect(3) = 1e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 331 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 221
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +2
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 77 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 169
Score = 24.9 bits (48), Expect(3) = 1e-013
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 484 LNRKAAPTITRGTRNSIILM 425
>gb|DR743961.1|DR743961 RTCU1_19_G03.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_G03_A029 3', mRNA sequence
Length = 789
Score = 133 bits (284), Expect = 2e-030
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = -1 / -2
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +
Sbjct: 740 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGR 561
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 560 DATRDFEDVGHSPAAKGMLDNYLVGVLE 477
Score = 67.5 bits (141), Expect = 9e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / +3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 489 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 656
Score = 52.8 bits (109), Expect(3) = 5e-013
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / +1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 613 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 732
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / -3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 655 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 479
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / +2
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 614 TWSRCTPCHR*QTSNPPCSCGQKP 685
Score = 35.0 bits (70), Expect(3) = 5e-013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 451 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 561
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 705 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 613
Score = 23.1 bits (44), Expect(3) = 5e-013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 298 LNRKVAPTITRGTRNSIILM 357
>gb|CF668107.1|CF668107 RTCNT1_34_A04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_34_A04_A029 5', mRNA sequence
Length = 677
Score = 113 bits (242), Expect(2) = 2e-030
Identities = 41/70 (58%), Positives = 56/70 (80%)
Frame = -1 / +3
Query: 552 EVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAM 373
EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE VGHS A+ M
Sbjct: 6 EVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFESVGHSIAAQGM 185
Query: 372 MDEYLVGEID 343
M+ YL+G ++
Sbjct: 186 METYLIGVLE 215
Score = 38.6 bits (78), Expect(2) = 2e-030
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 309 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 404
Score = 35.9 bits (72), Expect(2) = 0.003
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 482 LVTLYTLPPMTSQQSSLVLCLATS 553
LVT TLPPMT+QQS+L+L + TS
Sbjct: 76 LVTS*TLPPMTNQQSALLLWVETS 5
Score = 24.4 bits (47), Expect(2) = 0.003
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 214 SRTPIR*VSIMPCAAML*PTLSKSWVAS 131
>gb|CD027369.1|CD027369 NXNV046A05 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046A05 5' similar to Arabidopsis thaliana sequence
At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 509
Score = 121 bits (258), Expect(2) = 2e-030
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 19 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 198
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 199 VGHSIAAQGMMETYLIGVLE 258
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 119 LVTS*TLPPMTNQQSALLLWVETSFMVITL 30
Score = 31.3 bits (62), Expect(2) = 2e-030
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1 / +1
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+L FLVPL I+G+A + K
Sbjct: 352 KDNQPSFFTKLLXFLVPLLIVGVAFGXXXFLK 447
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -1
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 257 SRTPIR*VSIMPCAAML*PTLSKSWVAS 174
>gb|DR094669.1|DR094669 STRR1_16_B04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_16_B04_A033 3', mRNA sequence
Length = 669
Score = 132 bits (282), Expect = 3e-030
Identities = 47/87 (54%), Positives = 69/87 (79%)
Frame = -1 / -1
Query: 603 RQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKD 424
+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +D
Sbjct: 606 KAQASIAMADLRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGRD 427
Query: 423 ATDDFEDVGHSSTARAMMDEYLVGEID 343
AT DFEDVGHS A+ M+D YLVG ++
Sbjct: 426 ATRDFEDVGHSPAAKGMLDNYLVGVLE 346
Score = 65.2 bits (136), Expect = 4e-010
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / +1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G N + S V LQ+LGH+VHLA DD+PA
Sbjct: 358 HQVIIQHPLGRWAVPNVFKIPGGIPS*GLH*NFLPSWVFLQELGHVVHLATDDKPA 525
Score = 51.5 bits (106), Expect(2) = 3e-010
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / +2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I + C
Sbjct: 482 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLRSAIAMEAC 601
Score = 47.3 bits (97), Expect = 1e-004
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = +3 / +3
Query: 345 QSHPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
Q P S P+ CA L+N HP E L G TWS CTPC R*+ S+
Sbjct: 348 QERPPSNYPASPWPLGCAQRLQNPWWHPVLRPPLELPPLLGVLAGTWSRCTPCHR*QTSN 527
Query: 525 RPWCCAWPP 551
P C P
Sbjct: 528 PPCSCGPRP 554
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/59 (45%), Positives = 28/59 (47%)
Frame = -2 / -2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + T E F P M P I K GTA P W T W L
Sbjct: 524 AGLSSVARCTT*PSSCKNTQEGRKF*WRPQDGMPPGILKTLGTAQRPRGCWIITWWAFL 348
Score = 43.7 bits (89), Expect = 0.001
Identities = 29/73 (39%), Positives = 36/73 (49%)
Frame = -3 / -3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQ 392
Q V + G Q QG LL HR QGVQ DQV +P R S+ GC++ F R AQ
Sbjct: 574 QSVQSQAGLGPQEQGGLLVCHRWQGVQRDQVPARTPRRGGSSSGGLRTGCHQGF*RRWAQ 395
Query: 391 QHCPCNDGRVLSG 353
+ G +L G
Sbjct: 394 PSGQGDAG*LLGG 356
Score = 35.0 bits (70), Expect(2) = 3e-010
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / +2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 320 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 430
>gb|DR094743.1|DR094743 STRR1_16_B04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_16_B04_A033 5', mRNA sequence
Length = 661
Score = 132 bits (282), Expect = 3e-030
Identities = 47/87 (54%), Positives = 69/87 (79%)
Frame = -1 / -1
Query: 603 RQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKD 424
+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +D
Sbjct: 592 KAQASIAMADLRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGRD 413
Query: 423 ATDDFEDVGHSSTARAMMDEYLVGEID 343
AT DFEDVGHS A+ M+D YLVG ++
Sbjct: 412 ATRDFEDVGHSPAAKGMLDNYLVGVLE 332
Score = 65.2 bits (136), Expect = 4e-010
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / +2
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G N + S V LQ+LGH+VHLA DD+PA
Sbjct: 344 HQVIIQHPLGRWAVPNVFKIPGGIPS*GLH*NFLPSWVFLQELGHVVHLATDDKPA 511
Score = 51.5 bits (106), Expect(2) = 3e-010
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / +3
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I + C
Sbjct: 468 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLRSAIAMEAC 587
Score = 47.3 bits (97), Expect = 1e-004
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = +3 / +1
Query: 345 QSHPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
Q P S P+ CA L+N HP E L G TWS CTPC R*+ S+
Sbjct: 334 QERPPSNYPASPWPLGCAQRLQNPWWHPVLRPPLELPPLLGVLAGTWSRCTPCHR*QTSN 513
Query: 525 RPWCCAWPP 551
P C P
Sbjct: 514 PPCSCGPRP 540
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/59 (45%), Positives = 28/59 (47%)
Frame = -2 / -2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + T E F P M P I K GTA P W T W L
Sbjct: 510 AGLSSVARCTT*PSSCKNTQEGRKF*WRPQDGMPPGILKTLGTAQRPRGCWIITWWAFL 334
Score = 43.7 bits (89), Expect = 0.001
Identities = 29/73 (39%), Positives = 36/73 (49%)
Frame = -3 / -3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQ 392
Q V + G Q QG LL HR QGVQ DQV +P R S+ GC++ F R AQ
Sbjct: 560 QSVQSQAGLGPQEQGGLLVCHRWQGVQRDQVPARTPRRGGSSSGGLRTGCHQGF*RRWAQ 381
Query: 391 QHCPCNDGRVLSG 353
+ G +L G
Sbjct: 380 PSGQGDAG*LLGG 342
Score = 35.0 bits (70), Expect(2) = 3e-010
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / +3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 306 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 416
>gb|CX649684.1|CX649684 COLD1_36_G06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_G06_A029 5', mRNA sequence
Length = 434
Score = 131 bits (281), Expect = 4e-030
Identities = 48/88 (54%), Positives = 69/88 (78%)
Frame = -1 / +3
Query: 606 DRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAK 427
D+ Q M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++
Sbjct: 12 DQ*QASVTMAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGX 191
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 192 DATRDFEDVGHSPAAKGMLDNYLVGVLE 275
Score = 68.4 bits (143), Expect = 5e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 263 HQVVIQHPLGRWAVPNVFKIPGGIXS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 96
Score = 52.8 bits (109), Expect(2) = 3e-011
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDILVFLC 598
NLVTLYTLPPMT+QQSSL+L T R+ TL I+ C
Sbjct: 139 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIVTEAC 20
Score = 45.5 bits (93), Expect = 4e-004
Identities = 27/63 (42%), Positives = 29/63 (46%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRLM 342
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 97 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDXMPPGILKTLGTAQRPRGCWITTWWAFLK 276
Query: 341 QPR 333
R
Sbjct: 277 VSR 285
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 138 TWSRCTPCHR*QTSNPPCSCGQKP 67
Score = 35.0 bits (70), Expect(2) = 3e-011
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 301 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 191
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +2
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 47 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQV 139
>gb|DR020199.1|DR020199 STRS1_35_G03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_35_G03_A034 3', mRNA sequence
Length = 720
Score = 130 bits (279), Expect = 8e-030
Identities = 46/80 (57%), Positives = 67/80 (83%)
Frame = -1 / -2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +DAT DFED
Sbjct: 644 MADLRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFED 465
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ M+D YLVG ++
Sbjct: 464 VGHSPAAKGMLDNYLVGVLE 405
Score = 65.2 bits (136), Expect = 4e-010
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / +3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G N + S V LQ+LGH+VHLA DD+PA
Sbjct: 417 HQVIIQHPLGRWAVPNVFKIPGGIPS*GLH*NFLPSWVFLQELGHVVHLATDDKPA 584
Score = 49.6 bits (102), Expect(2) = 5e-010
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
NLVTLYTLPPMT+QQSSL+L T R+ TL
Sbjct: 541 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTL 633
Score = 47.3 bits (97), Expect = 1e-004
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = +3 / +2
Query: 345 QSHPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
Q P S P+ CA L+N HP E L G TWS CTPC R*+ S+
Sbjct: 407 QERPPSNYPASPWPLGCAQRLQNPWWHPVLRPPLELPPLLGVLAGTWSRCTPCHR*QTSN 586
Query: 525 RPWCCAWPP 551
P C P
Sbjct: 587 PPCSCGPRP 613
Score = 45.1 bits (92), Expect = 5e-004
Identities = 27/59 (45%), Positives = 28/59 (47%)
Frame = -2 / -3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + T E F P M P I K GTA P W T W L
Sbjct: 583 AGLSSVARCTT*PSSCKNTQEGRKF*WRPQDGMPPGILKTLGTAQRPRGCWIITWWAFL 407
Score = 43.7 bits (89), Expect = 0.001
Identities = 29/73 (39%), Positives = 36/73 (49%)
Frame = -3 / -1
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCGAQ 392
Q V + G Q QG LL HR QGVQ DQV +P R S+ GC++ F R AQ
Sbjct: 633 QSVQSQAGLGPQEQGGLLVCHRWQGVQRDQVPARTPRRGGSSSGGLRTGCHQGF*RRWAQ 454
Query: 391 QHCPCNDGRVLSG 353
+ G +L G
Sbjct: 453 PSGQGDAG*LLGG 415
Score = 34.1 bits (68), Expect(2) = 5e-010
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +PTK S I A LCPTSSKS VAS
Sbjct: 406 SRTPTK*LSSIPLAAGLCPTSSKSLVAS 489
>gb|DR120575.1|DR120575 RTMG1_30_C12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_30_C12_A029 5', mRNA sequence
Length = 618
Score = 111 bits (237), Expect(2) = 1e-029
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = -1 / +2
Query: 558 LEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTAR 379
+ EV H++K DCW VIGG+VY+VT FLE+HPGG++VL+ ++ DAT DFE VGHS A+
Sbjct: 2 MNEVFTHSSKADCWFVIGGEVYDVTNFLEEHPGGEEVLIEASGGDATQDFESVGHSIAAQ 181
Query: 378 AMMDEYLVGEID 343
MM+ YL+G ++
Sbjct: 182 GMMETYLIGVLE 217
Score = 38.6 bits (78), Expect(2) = 1e-029
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +2
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 311 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 406
Score = 33.1 bits (66), Expect(2) = 0.018
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / -1
Query: 482 LVTLYTLPPMTSQQSSLVLCLATS 553
LVT T PPMT+QQS+L+L + TS
Sbjct: 78 LVTS*TSPPMTNQQSALLLWVKTS 7
Score = 24.4 bits (47), Expect(2) = 0.018
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -1
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 216 SRTPIR*VSIMPCAAML*PTLSKSWVAS 133
>gb|CF670782.1|CF670782 RTCNT1_52_B12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_52_B12_A029 5', mRNA sequence
Length = 690
Score = 130 bits (278), Expect = 1e-029
Identities = 46/80 (57%), Positives = 67/80 (83%)
Frame = -1 / +1
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M+ +V++L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +DAT DFED
Sbjct: 13 MAELRVFSLKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFED 192
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ M+D YLVG ++
Sbjct: 193 VGHSPAAKGMLDNYLVGVLE 252
Score = 68.9 bits (144), Expect(2) = 2e-012
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S V LQ+LGH+VHLA DD+PA
Sbjct: 240 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWVFLQELGHVVHLATDDKPA 73
Score = 50.6 bits (104), Expect(2) = 1e-010
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPDIL 586
NLVTLYTLPPMT+QQSSL+L T R+ TL I+
Sbjct: 116 NLVTLYTLPPMTNQQSSLLLWAETCLRLNTLSSAIV 9
Score = 49.2 bits (101), Expect = 3e-005
Identities = 26/69 (37%), Positives = 31/69 (44%)
Frame = +3 / -3
Query: 345 QSHPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
Q P S+ P+ CA L+N HP E L G TWS CTPC R*+ S+
Sbjct: 250 QERPPSSYPASPWPLGCAQRLQNPWWHPVLRPPPELPPLLGVLAGTWSRCTPCHR*QTSN 71
Query: 525 RPWCCAWPP 551
P C P
Sbjct: 70 PPCSCGQKP 44
Score = 47.3 bits (97), Expect = 1e-004
Identities = 27/59 (45%), Positives = 29/59 (49%)
Frame = -2 / +2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + T E F P M P I K GTA P W +T W L
Sbjct: 74 AGLSSVARCTT*PSSCKNTQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 250
Score = 37.7 bits (76), Expect = 0.083
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = -3 / +3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWR 458
Q V + G Q QG LL HR QGVQ DQV +P R
Sbjct: 24 QSVQSQAGFCPQEQGGLLVCHRWQGVQRDQVPARTPRR 137
Score = 35.0 bits (70), Expect(2) = 1e-010
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 278 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 168
Score = 24.9 bits (48), Expect(2) = 2e-012
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 431 LNRKAAPTITRGTRNSIILM 372
>gb|BQ633910.1|BQ633910 NXRV062_D01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV062_D01 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 560
Score = 129 bits (276), Expect = 2e-029
Identities = 52/72 (72%), Positives = 60/72 (83%)
Frame = -1 / +2
Query: 402 VGHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAIL 223
VGHS+TAR MMD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAIL
Sbjct: 11 VGHSTTAREMMDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAIL 190
Query: 222 GLAVAVRMYTKS 187
GLAVAVR YTK+
Sbjct: 191 GLAVAVRFYTKT 226
Score = 85.8 bits (181), Expect = 3e-016
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = +2 / -3
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIARA 385
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y SII+ A
Sbjct: 207 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWSIISLA 28
Query: 386 VLLCPT 403
V+LCPT
Sbjct: 27 VVLCPT 10
>gb|CO366800.1|CO366800 RTK1_30_E06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_E06_A029 3', mRNA sequence
Length = 864
Score = 128 bits (275), Expect = 3e-029
Identities = 45/76 (59%), Positives = 65/76 (85%)
Frame = -1 / +2
Query: 570 KVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 391
+V++L++V+ H +K+DCWL IGGKVYNVTKFL++HPGG++VL+ ++ +DAT DFEDVGHS
Sbjct: 8 RVFSLKQVSAHKSKEDCWLFIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFEDVGHS 187
Query: 390 STARAMMDEYLVGEID 343
A+ M+D YLVG ++
Sbjct: 188 PAAKGMLDNYLVGVLE 235
Score = 66.1 bits (138), Expect(2) = 5e-011
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA D++PA
Sbjct: 223 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDEQPA 56
Score = 47.3 bits (97), Expect(2) = 1e-009
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
NLVTLYTLPPM +QQSSL+L T R+ TL
Sbjct: 99 NLVTLYTLPPMNNQQSSLLLWAETCLRLNTL 7
Score = 45.1 bits (92), Expect = 5e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 57 AGCSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 233
Score = 37.3 bits (75), Expect = 0.11
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3 / -2
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R* S+ P C P
Sbjct: 98 TWSRCTPCHR*TTSNPPCSCGQKP 27
Score = 35.0 bits (70), Expect(2) = 1e-009
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 261 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 151
Score = 34.5 bits (69), Expect = 0.77
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQV 479
Q V + G Q QG LL HR QGVQ DQV
Sbjct: 7 QSVQSQAGFCPQEQGGLLVVHRWQGVQRDQV 99
Score = 23.1 bits (44), Expect(2) = 5e-011
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -1
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 414 LNRKVAPTITRGTRNSIILM 355
>gb|CF671366.1|CF671366 RTCNT1_56_D01.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_56_D01_A029 5', mRNA sequence
Length = 562
Score = 124 bits (266), Expect = 5e-028
Identities = 44/72 (61%), Positives = 61/72 (84%)
Frame = -1 / +3
Query: 558 LEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTAR 379
L++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +DAT DFEDVGHS A+
Sbjct: 3 LKQVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFEDVGHSPAAK 182
Query: 378 AMMDEYLVGEID 343
M+D YLVG ++
Sbjct: 183 GMLDNYLVGVLE 218
Score = 67.5 bits (141), Expect(2) = 4e-012
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 206 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDKPA 39
Score = 46.0 bits (94), Expect(2) = 3e-009
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSR 559
NLVTLYTLPPMT+QQSSL+L T R
Sbjct: 82 NLVTLYTLPPMTNQQSSLLLWAETCLR 2
Score = 44.6 bits (91), Expect = 7e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 40 AGLSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 216
Score = 38.2 bits (77), Expect = 0.061
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -2
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R*+ S+ P C P
Sbjct: 81 TWSRCTPCHR*QTSNPPCSCGQKP 10
Score = 35.0 bits (70), Expect(2) = 3e-009
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 244 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 134
Score = 30.9 bits (61), Expect = 9.7
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / +2
Query: 538 QHQGRLLARHRRQGVQCDQV 479
Q QG LL HR QGVQ DQV
Sbjct: 23 QEQGGLLVCHRWQGVQRDQV 82
Score = 24.9 bits (48), Expect(2) = 4e-012
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 397 LNRKAAPTITRGTRNSIILM 338
>gb|BX251663.1|BX251663 BX251663 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP053F11, mRNA sequence
Length = 708
Score = 123 bits (264), Expect = 1e-027
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = -1 / +3
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VTKFLE+HPGG++VL+ ++ DAT DFE
Sbjct: 285 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTKFLEEHPGGEEVLIEASGGDATQDFES 464
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YLVG ++
Sbjct: 465 VGHSIAAQGMMETYLVGVLE 524
Score = 51.0 bits (105), Expect = 8e-006
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +1 / -2
Query: 352 TH*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
T+ V HH S A+ + F+I+G + G +N+++S V+ QKL +I+ LA D+PA
Sbjct: 515 TNQVGFHHALCSYAMTYTFKILGCVSSRGLYENLLSSWVLFQKLSNIIDLATYDKPA 345
Score = 42.3 bits (86), Expect(2) = 7e-006
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
NLVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 388 NLVTS*TLPPMTNQQSALLLWVDTSFMVITL 296
Score = 27.2 bits (53), Expect(2) = 7e-006
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +PT+ SI+ A +L PT SKS VAS
Sbjct: 523 SRTPTR*VSIMPCAAML*PTLSKSWVAS 440
>gb|CV036580.1|CV036580 RTNACL1_60_F04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_60_F04_A029 3', mRNA sequence
Length = 860
Score = 122 bits (261), Expect = 3e-027
Identities = 43/71 (60%), Positives = 60/71 (84%)
Frame = -1 / +2
Query: 555 EEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARA 376
++V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +DAT DFEDVGHS A+
Sbjct: 2 KQVSAHKSKEDCWXVIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFEDVGHSPAAKG 181
Query: 375 MMDEYLVGEID 343
M+D YLVG ++
Sbjct: 182 MLDNYLVGVLE 214
Score = 66.6 bits (139), Expect(2) = 1e-011
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1 / -2
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD PA
Sbjct: 202 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDXPA 35
Score = 45.5 bits (93), Expect = 4e-004
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 36 AGXSSVARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 212
Score = 45.1 bits (92), Expect(2) = 6e-009
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 479 NLVTLYTLPPMTSQQSSLVLCLAT 550
NLVTLYTLPPMT+QQSSL+L T
Sbjct: 78 NLVTLYTLPPMTNQQSSLLLWAET 7
Score = 37.3 bits (75), Expect = 0.11
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3 / -1
Query: 480 TWSHCTPCRR*RASSRPWCCAWPP 551
TWS CTPC R* S+ P C P
Sbjct: 77 TWSRCTPCHR*XTSNPPCSCGQKP 6
Score = 35.0 bits (70), Expect(2) = 6e-009
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 240 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 130
Score = 31.8 bits (63), Expect = 5.2
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / +1
Query: 538 QHQGRLLARHRRQGVQCDQV 479
Q QG LL HR QGVQ DQV
Sbjct: 19 QEQGGLLVXHRWQGVQRDQV 78
Score = 24.9 bits (48), Expect(2) = 1e-011
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 393 LNRKAAPTITRGTRNSIILM 334
>gb|CX645400.1|CX645400 COLD1_2_B07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_2_B07_A029 5', mRNA sequence
Length = 752
Score = 122 bits (261), Expect = 3e-027
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = -1 / +3
Query: 552 EVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAM 373
+V+ H +K+DCW VIGGKVYNVTKFL++HPGG++VL+ ++ +DAT DFEDVGHS A+ M
Sbjct: 3 QVSAHKSKEDCWFVIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFEDVGHSPAAKGM 182
Query: 372 MDEYLVGEID 343
+D YLVG ++
Sbjct: 183 LDNYLVGVLE 212
Score = 68.9 bits (144), Expect(2) = 2e-012
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S V LQ+LGH+VHLA DD+PA
Sbjct: 200 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWVFLQELGHVVHLATDDKPA 33
Score = 49.2 bits (101), Expect = 3e-005
Identities = 26/69 (37%), Positives = 31/69 (44%)
Frame = +3 / -3
Query: 345 QSHPLSTRPSLHGQCCCAPHLRNHR*HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASS 524
Q P S+ P+ CA L+N HP E L G TWS CTPC R*+ S+
Sbjct: 210 QERPPSSYPASPWPLGCAQRLQNPWWHPVLRPPPELPPLLGVLAGTWSRCTPCHR*QTSN 31
Query: 525 RPWCCAWPP 551
P C P
Sbjct: 30 PPCSCGQKP 4
Score = 47.3 bits (97), Expect = 1e-004
Identities = 27/59 (45%), Positives = 29/59 (49%)
Frame = -2 / +1
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + T E F P M P I K GTA P W +T W L
Sbjct: 34 AGLSSVARCTT*PSSCKNTQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 210
Score = 45.1 bits (92), Expect(2) = 6e-009
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLAT 550
NLVTLYTLPPMT+QQSSL+L T
Sbjct: 76 NLVTLYTLPPMTNQQSSLLLWAET 5
Score = 35.0 bits (70), Expect(2) = 6e-009
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 238 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 128
Score = 34.1 bits (68), Expect = 1.1
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3 / +2
Query: 538 QHQGRLLARHRRQGVQCDQVSGGSPWR 458
Q QG LL HR QGVQ DQV +P R
Sbjct: 17 QEQGGLLVCHRWQGVQRDQVPARTPRR 97
Score = 24.9 bits (48), Expect(2) = 2e-012
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 391 LNRKAAPTITRGTRNSIILM 332
>gb|AW290709.1|AW290709 NXNV046A05F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046A05 5', mRNA sequence
Length = 509
Score = 121 bits (258), Expect = 7e-027
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE
Sbjct: 19 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFES 198
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGHS A+ MM+ YL+G ++
Sbjct: 199 VGHSIAAQGMMETYLIGVLE 258
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 119 LVTS*TLPPMTNQQSALLLWVETSFMVITL 30
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -1
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 257 SRTPIR*VSIMPCAAML*PTLSKSWVAS 174
>gb|DR019591.1|DR019591 STRS1_31_C08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_C08_A034 3', mRNA sequence
Length = 838
Score = 115 bits (246), Expect = 3e-025
Identities = 41/66 (62%), Positives = 55/66 (83%)
Frame = -1 / +2
Query: 540 HNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEY 361
H +K+DCW VI GKVYNVTKFL++HPGG++VL+ ++ +DAT DFEDVGHS A+ M+D Y
Sbjct: 2 HKSKEDCWFVIVGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFEDVGHSPAAKGMLDNY 181
Query: 360 LVGEID 343
LVG ++
Sbjct: 182 LVGVLE 199
Score = 66.6 bits (139), Expect(2) = 1e-011
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1 / -1
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA DD+PA
Sbjct: 187 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLAHDDKPA 20
Score = 43.2 bits (88), Expect = 0.002
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
AG SS ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 21 AGLSSWARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 197
Score = 40.9 bits (83), Expect(2) = 9e-008
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVL 538
NLVTLYTLP MT+QQSSL+L
Sbjct: 63 NLVTLYTLPTMTNQQSSLLL 4
Score = 35.4 bits (71), Expect = 0.41
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 480 TWSHCTPCRR*RASSRPWCC 539
TWS CTPC R*+ S+ P C
Sbjct: 62 TWSRCTPCPR*QTSNPPCSC 3
Score = 35.0 bits (70), Expect(2) = 9e-008
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 225 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 115
Score = 31.3 bits (62), Expect = 7.1
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / +1
Query: 538 QHQGRLLARHRRQGVQCDQV 479
Q QG LL HR QGVQ DQV
Sbjct: 4 QEQGGLLVCHRGQGVQRDQV 63
Score = 24.9 bits (48), Expect(2) = 1e-011
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 378 LNRKAAPTITRGTRNSIILM 319
>gb|AW495779.1|AW495779 NXNV_065_C10_FF Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_065_C10_F 5', mRNA sequence
Length = 303
Score = 114 bits (244), Expect = 6e-025
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ + T DFE
Sbjct: 50 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIXXSGGXXTQDFES 229
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGH A+ MM+ YL+G ++
Sbjct: 230 VGHXXXAQGMMETYLIGVLE 289
Score = 40.0 bits (81), Expect = 0.017
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 150 LVTS*TLPPMTNQQSALLLWVETSFMVITL 61
>gb|CD027737.1|CD027737 NXNV_065_C10_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_065_C10 5' similar to Arabidopsis thaliana
sequence At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 303
Score = 114 bits (244), Expect = 6e-025
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL+ + T DFE
Sbjct: 50 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLIXXSGGXXTQDFES 229
Query: 402 VGHSSTARAMMDEYLVGEID 343
VGH A+ MM+ YL+G ++
Sbjct: 230 VGHXXXAQGMMETYLIGVLE 289
Score = 40.0 bits (81), Expect = 0.017
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 150 LVTS*TLPPMTNQQSALLLWVETSFMVITL 61
>gb|CF665787.1|CF665787 RTCNT1_18_A07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_18_A07_A029 5', mRNA sequence
Length = 662
Score = 110 bits (235), Expect = 1e-023
Identities = 44/62 (70%), Positives = 51/62 (82%)
Frame = -1 / -1
Query: 372 MDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYT 193
MD+Y +GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILGLAVAVR YT
Sbjct: 662 MDQYYIGEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILGLAVAVRFYT 483
Query: 192 KS 187
K+
Sbjct: 482 KT 477
Score = 67.0 bits (140), Expect = 1e-010
Identities = 32/55 (58%), Positives = 36/55 (65%)
Frame = +2 / +1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSS 370
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP Y S
Sbjct: 496 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISPM*YWS 660
>gb|BQ107699.1|BQ107699 NXLV103_C05_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV103_C05 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 481
Score = 100 bits (213), Expect = 1e-020
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = -1 / +2
Query: 354 GEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
GEID +T P K Y P KQ HY+QDKT EF+I+ILQFLVPLAILGLAVAVR YTK+
Sbjct: 20 GEIDPSTFPKKATYKPAKQAHYDQDKTSEFIIRILQFLVPLAILGLAVAVRFYTKT 187
Score = 65.7 bits (137), Expect = 3e-010
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISP 355
TATA P IA GTKN +IL+ NS VLS *C CL G+Y +G V SISP
Sbjct: 168 TATANPRIANGTKNCKILIINSEVLS*S*CACLAGLYVAFLGNVEGSISP 19
>gb|DR694156.1|DR694156 EST1084246 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE876 3' end, mRNA sequence
Length = 355
Score = 96.8 bits (205), Expect = 1e-019
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = -1 / +2
Query: 519 WLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
W VIGGKVY+VT FLE+HPGG++VL+ ++ DAT DFE VGHS A+ MM+ YL+G ++
Sbjct: 2 WFVIGGKVYDVTNFLEEHPGGEEVLIEASGGDATQDFESVGHSIAAQGMMETYLIGVLE 178
Score = 24.4 bits (47), Expect(2) = 7.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 344 SISPTKYSSIIARAVLLCPTSSKSSVAS 427
S +P + SI+ A +L PT SKS VAS
Sbjct: 177 SRTPIR*VSIMPCAAML*PTLSKSWVAS 94
Score = 24.0 bits (46), Expect(2) = 7.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 482 LVTLYTLPPMTSQ 520
LVT TLPPMT+Q
Sbjct: 39 LVTS*TLPPMTNQ 1
>gb|BF778171.1|BF778171 NXSI_080_A01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_080_A01 5' similar to Arabidopsis thaliana
sequence At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 220
Score = 95.5 bits (202), Expect = 3e-019
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW VIGGKVY+VT FLE+HPGG++VL + DAT DFE
Sbjct: 32 MEEIKVITMNEVSTHSSKADCWFVIGGKVYDVTNFLEEHPGGEEVLXXXSGGDATQDFES 211
Query: 402 VGH 394
H
Sbjct: 212 XXH 220
Score = 41.8 bits (85), Expect = 0.005
Identities = 25/55 (45%), Positives = 29/55 (52%)
Frame = +2 / -2
Query: 407 SKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
SKS VAS LVT TLPPMT+QQS+L+L + TS V TL
Sbjct: 207 SKSWVASPPEXXMRTSSPPGCSSRKLVTS*TLPPMTNQQSALLLWVETSFMVITL 43
>gb|CF399489.1|CF399489 RTDS3_26_F04.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_26_F04_A022 3', mRNA sequence
Length = 525
Score = 94.1 bits (199), Expect = 9e-019
Identities = 34/54 (62%), Positives = 46/54 (85%)
Frame = -1 / +2
Query: 504 GKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
GKVYNVTKFL++HPGG++VL+ ++ +DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 2 GKVYNVTKFLQEHPGGEEVLVEASGRDATRDFEDVGHSPAAKGMLDNYLVGVLE 163
Score = 56.5 bits (117), Expect = 2e-007
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLA 504
H V++ H G AVP++F+I G I G QN + S + LQ+LGH+VHLA
Sbjct: 151 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLA 2
Score = 37.3 bits (75), Expect = 0.11
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -2 / +3
Query: 503 ARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMWGTAALPVQ*WTST*WVRL 345
ARCT *PS + E F P M P I K GTA P W +T W L
Sbjct: 3 ARCTT*PSSCKNIQEGRKFWWRPQDGMPPGILKTLGTAQRPRGCWITTWWAFL 161
Score = 35.0 bits (70), Expect(2) = 0.002
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 189 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 79
Score = 25.8 bits (50), Expect(2) = 0.002
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / -2
Query: 480 TWSHCTPC 503
TWS CTPC
Sbjct: 26 TWSRCTPC 3
>gb|BM492433.1|BM492433 NXRV_025_C11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_025_C11 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 209
Score = 92.3 bits (195), Expect = 3e-018
Identities = 39/65 (60%), Positives = 44/65 (67%)
Frame = -1 / +1
Query: 381 RAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVR 202
R MMD Y +GE +T P K Y P KQ HY+QDKT EF+ ILQFLVP AI GL VA R
Sbjct: 4 REMMDHYYIGEXXPSTFPKKATYRPAKQAHYDQDKTSEFMNIILQFLVPXAIPGLXVAXR 183
Query: 201 MYTKS 187
YTK+
Sbjct: 184 FYTKT 198
Score = 57.9 bits (120), Expect = 7e-008
Identities = 29/57 (50%), Positives = 33/57 (57%)
Frame = +2 / -1
Query: 209 ATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASISPTKYSSIIA 379
AT P IA GTKN +I+ NS VLS *C CL G+Y G V ISP SII+
Sbjct: 176 ATXNPGIAXGTKNCKIMFINSEVLS*S*CACLAGLYVAFFGNVEGXISPM**WSIIS 6
>gb|BQ700460.1|BQ700460 NXRV105_H12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV105_H12 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 542
Score = 92.3 bits (195), Expect = 3e-018
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
S Y+L EV++HN DCWLVIGGKVY+VT+FLE+HP D+VLLS+T ATDDF
Sbjct: 365 SDPXXYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPXXDEVLLSATGXXATDDF 535
Score = 57.0 bits (118), Expect = 1e-007
Identities = 30/51 (58%), Positives = 31/51 (60%)
Frame = +2 / -3
Query: 407 SKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSR 559
SKSSVA L V D N VT YT PPMTSQQS L LC TS+R
Sbjct: 537 SKSSVAXLPVADNSTSSXXGCSSKNWVTSYTFPPMTSQQSLL*LCSETSAR 385
Score = 36.3 bits (73), Expect = 0.22
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1 / -2
Query: 445 QNIIASRVILQKLGHIVHLAADDEPA 522
Q+ I V QKLG+I+HL+ +D+PA
Sbjct: 499 QHFIXXXVFFQKLGNIIHLSTNDKPA 422
Score = 32.7 bits (65), Expect = 2.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2 / +3
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKM 402
AG S RC M P+FW+ T M C L M I M
Sbjct: 423 AGLSLVERCMMLPNFWKNTXXXMKCCYQQLAXMQQTILXM 542
>gb|AW758904.1|AW758904 NXNV_094_D06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_094_D06 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 276
Score = 90.4 bits (191), Expect = 1e-017
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = -1 / +2
Query: 351 EIDAATIPTKVKYTPPKQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTKS 187
EID +T P K Y P HY+QDKT EF+I+ILQFLVPLAILGL VAVR YTK+
Sbjct: 2 EIDPSTFPKKATYKPAXXAHYDQDKTSEFIIRILQFLVPLAILGLTVAVRFYTKT 166
Score = 53.3 bits (110), Expect = 2e-006
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = +2 / -1
Query: 206 TATARPSIARGTKNWRILMTNSWVLSWL*CGCLGGVYFTLVGIVAASIS 352
TAT P IA GTKN +IL+ NS VLS *C G+Y +G V SIS
Sbjct: 147 TATVNPRIANGTKNCKILIINSEVLS*S*CAXXAGLYVAFLGNVEGSIS 1
>gb|DR102773.1|DR102773 STRR1_83_F05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_83_F05_A033 5', mRNA sequence
Length = 465
Score = 90.4 bits (191), Expect = 1e-017
Identities = 32/64 (50%), Positives = 51/64 (79%)
Frame = -1 / -1
Query: 570 KVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 391
+V++L++V+ H +K+DC VIGGKVYNVTKFL++HPGG++VL+ ++ +DAT D + +G +
Sbjct: 462 RVFSLKQVSAHKSKEDCRFVIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDLKTLGTA 283
Query: 390 STAR 379
R
Sbjct: 282 QRPR 271
Score = 46.4 bits (95), Expect(2) = 8e-007
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2 / +2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
NLVTLYTLPPMT+ QSSL+L T R+ TL
Sbjct: 371 NLVTLYTLPPMTNLQSSLLLWAETCLRLNTL 463
Score = 45.5 bits (93), Expect = 4e-004
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 409 EIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDEPA 522
+I G I G N + S V LQ+LGH+VHLA DD+PA
Sbjct: 301 QIPGGIPS*GLH*NFLPSWVFLQELGHVVHLATDDKPA 414
Score = 39.6 bits (80), Expect(2) = 2e-008
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 411 FEDVGHSSTARAMMDEYLVGEID 343
FEDVGHS A+ M+D YLVG ++
Sbjct: 304 FEDVGHSPAAKGMLDNYLVGVLE 236
Score = 38.6 bits (78), Expect(2) = 2e-008
Identities = 23/58 (39%), Positives = 28/58 (48%)
Frame = -3 / -3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR*CSAVFHCQGCYR*FRRCG 398
Q V + G Q QG L HR QGVQ DQV +P R S+ GC++ F G
Sbjct: 463 QSVQSQAGLGPQEQGGLQVCHRWQGVQRDQVPARTPRRGGSSSGGLRTGCHQGFEDVG 290
Score = 35.0 bits (70), Expect = 0.56
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3 / +3
Query: 423 HPWQWKTAEHHRLQGDPPETWSHCTPCRR*RASSRPWCCAWPP 551
HP E L G TWS CTPC R*+ + P C P
Sbjct: 315 HPVLRPPLELPPLLGVLAGTWSRCTPCHR*QTCNPPCSCGPRP 443
Score = 34.5 bits (69), Expect = 0.77
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = -2 / -2
Query: 521 AGSSSAARCTM*PSFWRITLEAMMFCCLPLPRMLPMISKMW 399
AG SS ARCT *PS + T E F P M P I + W
Sbjct: 413 AGLSSVARCTT*PSSCKNTQEGRKF*WRPQDGMPPGI*RRW 291
Score = 26.3 bits (51), Expect(2) = 8e-007
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2 / +3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSS 409
FT + S +PTK S I A LCPTSS
Sbjct: 210 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSS 302
>gb|BF777925.1|BF777925 NXSI_078_H08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_078_H08 5' similar to Arabidopsis thaliana
sequence At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 257
Score = 88.6 bits (187), Expect = 4e-017
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = -1 / +2
Query: 582 MSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
M KV T+ EV+ H++K DCW V GKVY+VT FLE+HPGG++VL+ + D T DFE
Sbjct: 71 MEEIKVITMNEVSTHSSKADCWFVXXGKVYDVTNFLEEHPGGEEVLIXXSGGDXTQDFES 250
Query: 402 V 400
V
Sbjct: 251 V 253
Score = 35.9 bits (72), Expect = 0.30
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
LVT TLP MT+QQS+L+L + TS V TL
Sbjct: 171 LVTS*TLPXMTNQQSALLLWVETSFMVITL 82
>gb|CD020774.1|CD020774 NXNV_075_G03_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_075_G03 5' similar to Arabidopsis thaliana
sequence At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 160
Score = 85.8 bits (181), Expect = 3e-016
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSST 433
S KVY+L EV++HN DCWLVI GKVY+VT FLE+HPGGD+VL S+T
Sbjct: 14 SDPKVYSLAEVSEHNYSKDCWLVIXGKVYDVTHFLEEHPGGDEVLXSAT 160
Score = 37.3 bits (75), Expect = 0.11
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 485 VTLYTLPPMTSQQSSLVLCLATSSR 559
VT YT P MTSQQS L LC TS+R
Sbjct: 108 VTSYTFPXMTSQQSLL*LCSETSAR 34
Score = 31.8 bits (63), Expect = 5.2
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +1 / -1
Query: 448 NIIASRVILQKLGHIVHLAADDEPA 522
+ I+S V QK+G+I++L+ +D+PA
Sbjct: 145 HFISSWVFFQKMGNIIYLSXNDKPA 71
>gb|DR162242.1|DR162242 RTFE1_16_D02.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_16_D02_A029 5', mRNA sequence
Length = 550
Score = 84.0 bits (177), Expect = 1e-015
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = -1 / -1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
+G+K +TL+EVAKH KDD W+V+ G+V +VT FL DHPGG+ ++ +DAT++F
Sbjct: 367 AGAKAFTLDEVAKHTKKDDIWVVVNGQVLDVTSFLPDHPGGEKAIMLYAGRDATEEF 197
Score = 38.2 bits (77), Expect = 0.061
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2 / +3
Query: 485 VTLYTLPPMTSQQSSLVLCLATSSRVYTLDP 577
VT T P T+Q SS +CLATSSRV L P
Sbjct: 273 VTSRTCPLTTTQMSSFFVCLATSSRVKALAP 365
Score = 35.4 bits (71), Expect = 0.41
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3 / -3
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWR 458
QG H R G QA + R L R +R +C+ + GSP R
Sbjct: 359 QGFHSR*GCQAHEERRHLGRRQRTSPRCNFLPAGSPRR 246
>gb|CO160016.1|CO160016 FLD1_17_E05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_17_E05_A029 5', mRNA sequence
Length = 433
Score = 83.1 bits (175), Expect = 2e-015
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = -1 / +2
Query: 564 YTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSST 385
+T +VA H +K D +LVI +VYN + F+++ PGG++VL +DAT+ FEDVGH+
Sbjct: 92 FTYLDVAAHASKKDLYLVIHDEVYNTSSFVDEXPGGEEVLXDVGGQDATEAFEDVGHNDE 271
Query: 384 ARAMMDEYLVGEI 346
AR ++D LVG +
Sbjct: 272 AREILDGLLVGTL 310
Score = 32.2 bits (64), Expect = 3.8
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 353 PTKYSSIIARAVLLCPTSSKSSVAS 427
PT S I+RA L PTSSK+SVAS
Sbjct: 303 PTSRPSKISRASSLWPTSSKASVAS 229
>gb|DR098767.1|DR098767 STRR1_47_F01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_47_F01_A033 5', mRNA sequence
Length = 614
Score = 79.0 bits (166), Expect(2) = 2e-015
Identities = 29/45 (64%), Positives = 40/45 (88%)
Frame = -1 / +2
Query: 513 VIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTAR 379
VIGGKVYNVTKFL++HPGG++VL+ ++ +DAT DFEDVG+ S+ +
Sbjct: 5 VIGGKVYNVTKFLQEHPGGEEVLVEASGRDATRDFEDVGYFSSGQ 139
Score = 52.4 bits (108), Expect(2) = 1e-007
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1 / -2
Query: 394 VPHIFEIIGSILGSGRQQNIIASRVILQKLGHIVHLAADDE 516
VP++F+I G I G QN + S + LQ+LGH+VHLA DD+
Sbjct: 124 VPNVFKIPGGIPS*GLHQNFLPSWMFLQELGHVVHLATDDK 2
Score = 32.2 bits (64), Expect = 3.8
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / -3
Query: 479 NLVTLYTLPPMTS 517
NLVTLYTLPPMT+
Sbjct: 39 NLVTLYTLPPMTN 1
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 355 LNRKAAPTITRGTRNSIILM 296
Score = 23.1 bits (44), Expect(2) = 2e-015
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1 / +3
Query: 402 VGHSSTARAMMDEYLVGEID 343
+G A+ M+D YLVG ++
Sbjct: 117 LGTFPAAKGMLDNYLVGVLE 176
>gb|BE241325.1|BE241325 NXNV_185_H01_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_185_H01 5' similar to Arabidopsis thaliana
sequence At2g32720 putative cytochrome b5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 245
Score = 82.2 bits (173), Expect = 3e-015
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSS 436
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HP G VLLS+
Sbjct: 100 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPXGXXVLLSA 243
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSR 559
N VT YT PPMTSQQS L LC TS+R
Sbjct: 200 NWVTSYTFPPMTSQQSLL*LCSETSAR 120
Score = 34.1 bits (68), Expect = 1.1
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1 / -3
Query: 445 QNIIASRVILQKLGHIVHLAADDEPA 522
Q+ + V QKLG+I+HL+ +D+PA
Sbjct: 234 QHXXSXXVFFQKLGNIIHLSTNDKPA 157
>gb|DR161803.1|DR161803 RTFE1_14_B07.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_14_B07_A029 3', mRNA sequence
Length = 443
Score = 82.2 bits (173), Expect = 3e-015
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = -1 / +3
Query: 555 EEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARA 376
+EVA HNT +D W++I G+VY+VT++ HPGGD +L KDA+D F V HS A
Sbjct: 111 DEVALHNTPEDLWIIIYGRVYDVTEWQHQHPGGDFILQEHGGKDASDMFRSVQHSPDANG 290
Query: 375 MMDEYLVGEIDAATIPTKVKYTP 307
+ ++V + T K P
Sbjct: 291 IRPNFMVARLKKKTPKPAAKSAP 359
>gb|DR161888.1|DR161888 RTFE1_14_B07.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_14_B07_A029 5', mRNA sequence
Length = 430
Score = 82.2 bits (173), Expect = 3e-015
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = -1 / +1
Query: 555 EEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARA 376
+EVA HNT +D W++I G+VY+VT++ HPGGD +L KDA+D F V HS A
Sbjct: 85 DEVALHNTPEDLWIIIYGRVYDVTEWQHQHPGGDFILQEHGGKDASDMFRSVQHSPDANG 264
Query: 375 MMDEYLVGEIDAATIPTKVKYTP 307
+ ++V + T K P
Sbjct: 265 IRPNFMVARLKKKTPKPAAKSAP 333
>gb|CV036403.1|CV036403 RTNACL1_59_B12.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_B12_A029 3', mRNA sequence
Length = 779
Score = 81.3 bits (171), Expect = 7e-015
Identities = 29/49 (59%), Positives = 41/49 (83%)
Frame = -1 / +2
Query: 489 VTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
VTKFL++HPGG++VL+ ++ +DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 2 VTKFLQEHPGGEEVLVEASGRDATRDFEDVGHSPAAKGMLDNYLVGVLE 148
Score = 46.0 bits (94), Expect(2) = 1e-005
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1 / -2
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNIIASRVILQKLGH 489
H V++ H G AVP++F+I G I G QN + S + LQ+LGH
Sbjct: 136 HQVVIQHPLGRWAVPNVFKIPGGIPS*GLHQNFLPSWMFLQELGH 2
Score = 35.0 bits (70), Expect = 0.56
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 174 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 64
Score = 24.9 bits (48), Expect(2) = 1e-005
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 327 LNRKAAPTITRGTRNSIILM 268
>gb|CD025023.1|CD025023 NXSI_004_G12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_004_G12 5' similar to Arabidopsis thaliana
sequence At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 134
Score = 80.8 bits (170), Expect = 9e-015
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGD 454
S +KVY LE+V++HNT DCW+VIGGK Y+VTKFL HPGGD
Sbjct: 7 SDAKVYKLEDVSRHNTHQDCWIVIGGKXYDVTKFLXXHPGGD 132
Score = 42.3 bits (86), Expect = 0.003
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTL 571
NLVT Y PP+T QQS VLCL TSS + TL
Sbjct: 107 NLVTSYXFPPITIQQS**VLCLETSSSL*TL 15
>gb|DR089687.1|DR089687 RTAL1_10_E10.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_E10_A029 3', mRNA sequence
Length = 788
Score = 79.4 bits (167), Expect = 2e-014
Identities = 28/48 (58%), Positives = 40/48 (83%)
Frame = -1 / +3
Query: 486 TKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
TKFL++HPGG++VL+ ++ +DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 3 TKFLQEHPGGEEVLVEASGRDATRDFEDVGHSPAAKGMLDNYLVGVLE 146
Score = 35.0 bits (70), Expect(2) = 0.013
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 172 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 62
Score = 23.1 bits (44), Expect(2) = 0.013
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L P+I RGT+N ILM
Sbjct: 325 LNRKVAPTITRGTRNSIILM 266
>gb|CO162594.1|CO162594 FLD1_36_G06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_36_G06_A029 3', mRNA sequence
Length = 615
Score = 79.0 bits (166), Expect = 3e-014
Identities = 28/75 (37%), Positives = 49/75 (65%)
Frame = -1 / +3
Query: 570 KVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 391
K +T+EE+AKHNTKD+ W+V+ G V +++ +LE+HPGG +L+ +DAT++FE +
Sbjct: 174 KEFTMEEIAKHNTKDNVWVVVKGVVMDLSNWLEEHPGGVQAILNFMGRDATEEFEMLHDD 353
Query: 390 STARAMMDEYLVGEI 346
+ ++G +
Sbjct: 354 EVIPKYAPQQVIGRV 398
Score = 35.9 bits (72), Expect = 0.30
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -3 / +2
Query: 571 QGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR 455
+GVH G QAQHQG+ L R + Q++ G+P RR
Sbjct: 173 EGVHHGGDRQAQHQGQRLGRRQGCRHGPQQLARGAPRRR 289
Score = 34.1 bits (68), Expect = 1.1
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = +2 / -3
Query: 407 SKSSVASLAVEDXXXXXXXXXXXXNLVTLYTLPPMTSQQSSLVLCLATSSRV 562
S SSVAS ++ L+ T P T+Q SLVLCLA SS V
Sbjct: 337 SNSSVASRPMKFRMACTPPGCSSSQLLRSMTTPLTTTQTLSLVLCLAISSMV 182
>gb|DR069237.1|DR069237 RTDK1_5_G02.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_5_G02_A029 5', mRNA sequence
Length = 878
Score = 75.8 bits (159), Expect = 3e-013
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -1 / +1
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S+ TL E+ KHNT D CW+V+ VY+ T+FL+DHPGG D +L + D T++F+ +
Sbjct: 85 SRHITLSELQKHNTADSCWIVVHHHVYDCTRFLKDHPGGMDSILINAGLDCTEEFDAI 258
>gb|DR098847.1|DR098847 STRR1_48_F10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_48_F10_A033 3', mRNA sequence
Length = 751
Score = 75.8 bits (159), Expect = 3e-013
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -1 / -2
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S+ TL E+ KHNT D CW+V+ VY+ T+FL+DHPGG D +L + D T++F+ +
Sbjct: 408 SRHITLSELQKHNTADSCWIVVHHHVYDCTRFLKDHPGGMDSILINAGLDCTEEFDAI 235
>gb|DR164430.1|DR164430 RTFE1_48_H04.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_H04_A029 5', mRNA sequence
Length = 731
Score = 75.8 bits (159), Expect = 3e-013
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -1 / +2
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S+ TL E+ KHNT D CW+V+ VY+ T+FL+DHPGG D +L + D T++F+ +
Sbjct: 164 SRHITLSELQKHNTADSCWIVVHHHVYDCTRFLKDHPGGMDSILINAGLDCTEEFDAI 337
>gb|DR057580.1|DR057580 RTNIT1_6_D05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_D05_A029 5', mRNA sequence
Length = 895
Score = 75.3 bits (158), Expect = 4e-013
Identities = 27/82 (32%), Positives = 53/82 (64%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S ++ +++EV +H ++ D W V+ G+VYN++ +++ HPGG+D+L+ ++ KD + F
Sbjct: 546 SNKRLISMDEVKQHKSEGDIWTVLKGRVYNISPYMKFHPGGEDMLMKASGKDCSALFNKY 725
Query: 399 GHSSTARAMMDEYLVGEIDAAT 334
A ++++ LVG +DA T
Sbjct: 726 HAWVNAEFLLEKCLVGFLDAPT 791
>gb|DR080185.1|DR080185 RTFEPL1_21_A05.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_A05_A029 3', mRNA sequence
Length = 701
Score = 75.3 bits (158), Expect = 4e-013
Identities = 27/82 (32%), Positives = 53/82 (64%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
S ++ +++EV +H ++ D W V+ G+VYN++ +++ HPGG+D+L+ ++ KD + F
Sbjct: 178 SNKRLISMDEVKQHKSEGDIWTVLKGRVYNISPYMKFHPGGEDMLMKASGKDCSALFNKY 357
Query: 399 GHSSTARAMMDEYLVGEIDAAT 334
A ++++ LVG +DA T
Sbjct: 358 HAWVNAEFLLEKCLVGFLDAPT 423
>gb|CD020409.1|CD020409 NXNV068A08 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV068A08 5' similar to Arabidopsis thaliana sequence
At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 157
Score = 74.8 bits (157), Expect = 6e-013
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGD 454
S KVY+L EV++HN DCWLVIGGKVY+VT+FLE+HP D
Sbjct: 30 SDPKVYSLAEVSEHNYSKDCWLVIGGKVYDVTQFLEEHPXXD 155
Score = 43.2 bits (88), Expect = 0.002
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSR 559
N VT YT PPMTSQQS L LC TS+R
Sbjct: 130 NWVTSYTFPPMTSQQSLL*LCSETSAR 50
Score = 34.1 bits (68), Expect = 1.1
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1 / -3
Query: 454 IASRVILQKLGHIVHLAADDEPA 522
I+ V QKLG+I+HL+ +D+PA
Sbjct: 155 ISXXVFFQKLGNIIHLSTNDKPA 87
>gb|DR059027.1|DR059027 RTNIT1_15_G01.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_15_G01_A029 3', mRNA sequence
Length = 346
Score = 73.5 bits (154), Expect = 1e-012
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = -1 / -1
Query: 633 SPRLRLLHPDRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGD 454
SP L++ D T+ + + E+ H+ DD W+ I GKVY+VTK+L++HPGGD
Sbjct: 280 SPALKMTAMDDLSSPTKSPSWRKISTAELKTHDKPDDLWISISGKVYDVTKWLDNHPGGD 101
Query: 453 DVLLSSTAKDATDDF 409
LL+ +D TD F
Sbjct: 100 MPLLNLAGQDVTDSF 56
>gb|DT628737.1|DT628737 EST1155307 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMD142 5' end, mRNA sequence
Length = 648
Score = 72.5 bits (152), Expect = 3e-012
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = -1 / +1
Query: 633 SPRLRLLHPDRQQRKTRMSGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGD 454
SP L++ D T+ + + E+ H+ DD W+ I GKVY+VTK+L++HPGGD
Sbjct: 94 SPALKMTAMDDLSSPTKSPSWRKISPAELKTHDKPDDLWISISGKVYDVTKWLDNHPGGD 273
Query: 453 DVLLSSTAKDATDDF 409
LL+ +D TD F
Sbjct: 274 MPLLNLAGQDVTDSF 318
>gb|AA566948.1|AA566948 1002 Loblolly pine C Pinus taeda cDNA clone 5c11a, mRNA sequence
Length = 130
Score = 72.5 bits (152), Expect = 3e-012
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1 / +2
Query: 564 YTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSS 436
Y+L EV++HN DCWLVIGGKVY+VT FL HPG D +LL S
Sbjct: 2 YSLAEVSEHNYSKDCWLVIGGKVYDVTHFLXQHPG*DXLLLXS 130
Score = 41.4 bits (84), Expect = 0.007
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +2 / -2
Query: 485 VTLYTLPPMTSQQSSLVLCLATSSR 559
VT YT PPMTSQQS L LC TS+R
Sbjct: 81 VTSYTFPPMTSQQSLL*LCSETSAR 7
Score = 31.8 bits (63), Expect = 5.2
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +1 / -1
Query: 454 IASRVILQKLGHIVHLAADDEPA 522
I+S V+ QK+G+I++L+ +D+PA
Sbjct: 112 ISSWVLXQKMGNIIYLSTNDKPA 44
>gb|BF778002.1|BF778002 NXSI_079_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_079_G09 5' similar to Arabidopsis thaliana
sequence At1g60660 Putative Cytochrome B5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 560
Score = 70.7 bits (148), Expect = 1e-011
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVL 445
S KVY EVA+HN + DCW+VI KVY+VT ++++HPGGD +L
Sbjct: 148 STQKVYGKSEVAQHNKRTDCWIVIKNKVYDVTSYVDEHPGGDAIL 282
Score = 35.0 bits (70), Expect = 0.56
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1 / +1
Query: 471 DHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEI 346
D G D +L+ D+T+ F H+S M+DE+ +GE+
Sbjct: 253 DEHPGGDAILAHAGDDSTEXFYGPQHASRVFDMVDEFYLGEL 378
>gb|BE496340.1|BE496340 NXCI_019_A12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_019_A12 5' similar to Arabidopsis
thaliana sequence At1g26340 cytochrome b5 like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 266
Score = 69.8 bits (146), Expect = 2e-011
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = -1 / +3
Query: 570 KVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSS 436
K Y++E V+KHNT +DCWL+I GKVY+VT ++ HPGG +LL +
Sbjct: 66 KRYSMEAVSKHNTPNDCWLIIWGKVYDVTSWVPRHPGGSLILLKA 200
Score = 40.9 bits (83), Expect = 0.009
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3 / +2
Query: 574 IQGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR 455
++ + GG QAQH RLLA + QG++C + S WR+
Sbjct: 62 LEKIQHGGGEQAQHSERLLAHNMGQGLRCY*LGSSSSWRK 181
Score = 35.0 bits (70), Expect = 0.56
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / -2
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVY 565
LVT TLP + SQQS VLCL T+S +Y
Sbjct: 154 LVTS*TLPHIMSQQSFGVLCLLTASMLY 71
>gb|DR742709.1|DR742709 RTCU1_6_B05.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_6_B05_A029 5', mRNA sequence
Length = 757
Score = 69.3 bits (145), Expect = 3e-011
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = -1 / -3
Query: 471 DHPGGDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
+HPGG++VL+ ++ +DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 755 EHPGGEEVLVEASGRDATRDFEDVGHSPAAKGMLDNYLVGVLE 627
Score = 35.0 bits (70), Expect(2) = 0.004
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 601 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 711
Score = 24.9 bits (48), Expect(2) = 0.004
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / +1
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 448 LNRKAAPTITRGTRNSIILM 507
>gb|BX252025.1|BX252025 BX252025 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP058F12 similar to NITRATE REDUCTASE, mRNA
sequence
Length = 565
Score = 67.5 bits (141), Expect = 9e-011
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = -1 / +3
Query: 552 EVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
E+ H+ DD W+ I GKVY+VTK+L++HPGGD LLS +D TD F
Sbjct: 36 ELKTHDKPDDLWISISGKVYDVTKWLDNHPGGDLPLLSLAGQDVTDAF 179
>gb|BX254589.1|BX254589 BX254589 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP100G10 similar to NITRATE REDUCTASE, mRNA
sequence
Length = 677
Score = 67.5 bits (141), Expect = 9e-011
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = -1 / +2
Query: 552 EVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
E+ H+ DD W+ I GKVY+VTK+L++HPGGD LLS +D TD F
Sbjct: 155 ELKTHDKPDDLWISISGKVYDVTKWLDNHPGGDLPLLSLAGQDVTDAF 298
>gb|BE582204.1|BE582204 NXCI_026_C06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_026_C06 5' similar to Arabidopsis
thaliana sequence At1g60660 Putative Cytochrome B5 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 318
Score = 67.5 bits (141), Expect = 9e-011
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVL 445
S KVY EVA+HN + DCW+VI KVY+VT ++++HPG D +L
Sbjct: 148 SPQKVYGKSEVAQHNKRTDCWIVIKNKVYDVTSYVDEHPGXDAIL 282
>gb|DN613232.1|DN613232 EST966282 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABP71, mRNA sequence
Length = 811
Score = 67.5 bits (141), Expect = 9e-011
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = -1 / -2
Query: 552 EVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
E+ H+ DD W+ I GKVY+VTK+L++HPGGD LL+ +D TD F
Sbjct: 810 ELKTHDKPDDLWISISGKVYDVTKWLDNHPGGDMPLLNLAGQDVTDSF 667
>gb|CF392576.1|CF392576 RTDR3_6_B11.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_6_B11_A022 5', mRNA
sequence
Length = 668
Score = 65.7 bits (137), Expect = 3e-010
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1 / +2
Query: 564 YTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLL 442
YT E V+KHN +DCWL+I G+VY+VT ++ HPGG +LL
Sbjct: 98 YTTEAVSKHNATNDCWLIIWGRVYDVTSWVPHHPGGSLILL 220
Score = 35.4 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3 / +1
Query: 574 IQGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR 455
++ VH GG QAQ RLLA + G++C + S WR+
Sbjct: 88 LRKVHYGGGEQAQCD*RLLAHNMGPGLRCY*LGSSSSWRK 207
Score = 33.1 bits (66), Expect = 2.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVY 565
LVT T P + SQQS + LCL T+S VY
Sbjct: 180 LVTS*TRPHIMSQQSLVALCLLTASVVY 97
>gb|DR080257.1|DR080257 RTFEPL1_21_A05.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_A05_A029 5', mRNA sequence
Length = 742
Score = 65.7 bits (137), Expect = 3e-010
Identities = 20/54 (37%), Positives = 40/54 (74%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDAT 418
S ++ +L+EV +H ++ D W V+ G+VYN++ +++ HPGG+D+L+ ++ KD +
Sbjct: 573 SNKRLISLDEVKQHKSEGDIWTVLKGRVYNISPYMKFHPGGEDMLMKASGKDCS 734
>gb|DR687524.1|DR687524 EST1077606 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABT54 3' end, mRNA sequence
Length = 822
Score = 65.7 bits (137), Expect = 3e-010
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1 / +3
Query: 564 YTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLL 442
YT E V+KHN +DCWL+I G+VY+VT ++ HPGG +LL
Sbjct: 312 YTTEAVSKHNATNDCWLIIWGRVYDVTSWVPHHPGGSLILL 434
Score = 35.4 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3 / +2
Query: 574 IQGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR 455
++ VH GG QAQ RLLA + G++C + S WR+
Sbjct: 302 LRKVHYGGGEQAQCD*RLLAHNMGPGLRCY*LGSSSSWRK 421
Score = 33.1 bits (66), Expect = 2.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVY 565
LVT T P + SQQS + LCL T+S VY
Sbjct: 394 LVTS*TRPHIMSQQSLVALCLLTASVVY 311
>gb|DR689305.1|DR689305 EST1079391 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACG83 3' end, mRNA sequence
Length = 745
Score = 65.7 bits (137), Expect = 3e-010
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1 / +1
Query: 564 YTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLL 442
YT E V+KHN +DCWL+I G+VY+VT ++ HPGG +LL
Sbjct: 250 YTTEAVSKHNATNDCWLIIWGRVYDVTSWVPHHPGGSLILL 372
Score = 35.4 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3 / +3
Query: 574 IQGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR 455
++ VH GG QAQ RLLA + G++C + S WR+
Sbjct: 240 LRKVHYGGGEQAQCD*RLLAHNMGPGLRCY*LGSSSSWRK 359
Score = 33.1 bits (66), Expect = 2.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVY 565
LVT T P + SQQS + LCL T+S VY
Sbjct: 332 LVTS*TRPHIMSQQSLVALCLLTASVVY 249
>gb|DR689444.1|DR689444 EST1079530 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACI74 3' end, mRNA sequence
Length = 870
Score = 65.7 bits (137), Expect = 3e-010
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1 / +3
Query: 564 YTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLL 442
YT E V+KHN +DCWL+I G+VY+VT ++ HPGG +LL
Sbjct: 186 YTTEAVSKHNATNDCWLIIWGRVYDVTSWVPHHPGGSLILL 308
Score = 35.4 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3 / +2
Query: 574 IQGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR 455
++ VH GG QAQ RLLA + G++C + S WR+
Sbjct: 176 LRKVHYGGGEQAQCD*RLLAHNMGPGLRCY*LGSSSSWRK 295
Score = 33.1 bits (66), Expect = 2.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVY 565
LVT T P + SQQS + LCL T+S VY
Sbjct: 268 LVTS*TRPHIMSQQSLVALCLLTASVVY 185
>gb|DR690439.1|DR690439 EST1080525 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACV08 3' end, mRNA sequence
Length = 917
Score = 65.7 bits (137), Expect = 3e-010
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1 / +2
Query: 564 YTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLL 442
YT E V+KHN +DCWL+I G+VY+VT ++ HPGG +LL
Sbjct: 209 YTTEAVSKHNATNDCWLIIWGRVYDVTSWVPHHPGGSLILL 331
Score = 35.4 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3 / +1
Query: 574 IQGVHPRGGGQAQHQGRLLARHRRQGVQCDQVSGGSPWRR 455
++ VH GG QAQ RLLA + G++C + S WR+
Sbjct: 199 LRKVHYGGGEQAQCD*RLLAHNMGPGLRCY*LGSSSSWRK 318
Score = 33.1 bits (66), Expect = 2.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 482 LVTLYTLPPMTSQQSSLVLCLATSSRVY 565
LVT T P + SQQS + LCL T+S VY
Sbjct: 291 LVTS*TRPHIMSQQSLVALCLLTASVVY 208
>gb|DT632889.1|DT632889 EST1147820 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFO83 3' end, mRNA sequence
Length = 818
Score = 64.8 bits (135), Expect = 6e-010
Identities = 19/54 (35%), Positives = 40/54 (74%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDAT 418
S ++ +++EV +H ++ D W V+ G+VYN++ +++ HPGG+D+L+ ++ KD +
Sbjct: 625 SNKRLISMDEVKQHKSEGDIWTVLKGRVYNISPYMKFHPGGEDMLMKASGKDCS 786
>gb|DR119390.1|DR119390 RTMG1_23_A05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_A05_A029 3', mRNA sequence
Length = 668
Score = 44.1 bits (90), Expect(2) = 9e-010
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -1 / +3
Query: 426 DATDDFEDVGHSSTARAMMDEYLVGEID 343
DAT DFE VGHS A+ MM+ YL+G ++
Sbjct: 18 DATQDFESVGHSIAAQGMMETYLIGVLE 101
Score = 38.6 bits (78), Expect(2) = 9e-010
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 195 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 290
>gb|CV144790.1|CV144790 EST855999 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDA32 5' end, mRNA sequence
Length = 944
Score = 62.9 bits (131), Expect = 2e-009
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -1 / +1
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
S+ +LEE+ H+ + D W+ I GKVY+VT++L HPGGD +L+ +D TD F
Sbjct: 133 SRKISLEELKTHDKEGDLWVSIHGKVYDVTEWLHKHPGGDLPILNLGGQDVTDAF 297
>gb|DR687885.1|DR687885 EST1077968 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX72 3' end, mRNA sequence
Length = 806
Score = 62.9 bits (131), Expect = 2e-009
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -1 / +2
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
S+ +LEE+ H+ + D W+ I GKVY+VT++L HPGGD +L+ +D TD F
Sbjct: 239 SRKISLEELKTHDKEGDLWVSIHGKVYDVTEWLHKHPGGDLPILNLGGQDVTDAF 403
>gb|DT624715.1|DT624715 EST1159050 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAI32 5' end, mRNA sequence
Length = 682
Score = 62.9 bits (131), Expect = 2e-009
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -1 / +3
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
S+ +LEE+ H+ + D W+ I GKVY+VT++L HPGGD +L+ +D TD F
Sbjct: 87 SRKISLEELKTHDKEGDLWVSIHGKVYDVTEWLHKHPGGDLPILNLGGQDVTDAF 251
>gb|BQ106809.1|BQ106809 NXLV089_F02_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV089_F02 5' similar to Arabidopsis thaliana
sequence At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 460
Score = 62.5 bits (130), Expect = 3e-009
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = -1 / +3
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPG 460
S Y+L EV++HN DCWLVIGGKV++VT+F HPG
Sbjct: 327 SDPXXYSLAEVSEHNYSKDCWLVIGGKVFDVTQFXXXHPG 446
Score = 39.1 bits (79), Expect = 0.032
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2 / -1
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSR 559
N VT T PPMTSQQS L LC TS+R
Sbjct: 427 NWVTSNTFPPMTSQQSLL*LCSETSAR 347
>gb|CO201458.1|CO201458 RTCNT2_5_H07.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_5_H07_A029 5', mRNA sequence
Length = 358
Score = 62.0 bits (129), Expect = 4e-009
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = -1 / +1
Query: 573 SKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDD 451
S+ TL E+ KHNT + CW+V+ VY+ T+FL+DHPGG D
Sbjct: 235 SRHITLSELQKHNTANSCWIVVHHHVYDCTRFLKDHPGGMD 357
>gb|CO158724.1|CO158724 FLD1_8_G08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_G08_A029 5', mRNA sequence
Length = 802
Score = 61.6 bits (128), Expect = 6e-009
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 552 EVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 403
EVA HNT C++ +G +V++VT F+E HPGG +++L KD T +D
Sbjct: 159 EVAAHNTAKSCYVTMGNRVFDVTDFIESHPGGGELVLEYGGKDVTKILKD 308
>gb|DN614213.1|DN614213 EST967263 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAC143, mRNA sequence
Length = 785
Score = 59.7 bits (124), Expect = 2e-008
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = -1 / -3
Query: 525 DCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
D W+ I GKVY+VTK+L++HPGGD LL+ +D TD F
Sbjct: 783 DLWISISGKVYDVTKWLDNHPGGDMPLLNLAGQDVTDSF 667
>gb|DR088678.1|DR088678 RTAL1_3_E10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_3_E10_A029 5', mRNA sequence
Length = 744
Score = 57.9 bits (120), Expect = 7e-008
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = -1 / +3
Query: 528 DDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 400
D CW+V+ VY+ T+FL+DHPGG D +L + D T++F+ +
Sbjct: 6 DSCWIVVHHHVYDCTRFLKDHPGGMDSILINAGLDCTEEFDAI 134
>gb|BQ654423.1|BQ654423 NXRV080_B03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV080_B03 5', mRNA sequence
Length = 385
Score = 56.5 bits (117), Expect = 2e-007
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = -1 / +2
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYT 193
++KT EF+I LQFLVPLAILGLAVAVR YT
Sbjct: 83 RNKTSEFIIXXLQFLVPLAILGLAVAVRFYT 175
Score = 33.6 bits (67), Expect = 1.4
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 206 TATARPSIARGTKNWRILMTNSWVL 280
TATA P IA GTKN + + NS VL
Sbjct: 162 TATANPRIANGTKNCKXXIINSEVL 88
>gb|BX677606.1|BX677606 BX677606 RN Pinus pinaster cDNA clone RN41H06, mRNA sequence
Length = 589
Score = 56.1 bits (116), Expect = 3e-007
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -1 / +3
Query: 456 DDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
++VL+ ++ +DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 3 EEVLVEASGRDATRDFEDVGHSPAAKGMLDNYLVGVLE 116
Score = 35.0 bits (70), Expect = 0.56
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 142 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 32
Score = 34.5 bits (69), Expect = 0.77
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 355 H*VLVHHCTGSAAVPHIFEIIGSILGSGRQQNII 456
H V++ H G AVP++F+I G I G QN++
Sbjct: 104 HQVIIQHPLGRWAVPNVFKISGGIPS*GLHQNLL 3
>gb|DN456267.1|DN456267 EST952066 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGN18 5' end, mRNA sequence
Length = 914
Score = 55.1 bits (114), Expect = 5e-007
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -1 / +2
Query: 540 HNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
H+ + D W+ I GKVY+VT++L HPGGD +L+ +D TD F
Sbjct: 8 HDKEGDLWVSIHGKVYDVTEWLHKHPGGDLPILNLGGQDVTDAF 139
>gb|DT625319.1|DT625319 EST1159594 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAO25 5' end, mRNA sequence
Length = 968
Score = 55.1 bits (114), Expect = 5e-007
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -1 / +2
Query: 540 HNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
H+ + D W+ I GKVY+VT++L HPGGD +L+ +D TD F
Sbjct: 8 HDKEGDLWVSIHGKVYDVTEWLHKHPGGDLPILNLGGQDVTDAF 139
>gb|CD025813.1|CD025813 NXSI_080_B08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_080_B08 5' similar to Arabidopsis thaliana
sequence At5g48810 cytochrome b5 (dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 195
Score = 52.4 bits (108), Expect = 3e-006
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKFL 475
S K Y+L EV++HN CWLVIGG Y+VT+FL
Sbjct: 91 SDPKXYSLAEVSEHNYSKXCWLVIGGXXYDVTQFL 195
Score = 39.1 bits (79), Expect = 0.032
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2 / -2
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSR 559
N VT Y PPMTSQQ L LC TS+R
Sbjct: 191 NWVTSYXFPPMTSQQXLL*LCSETSAR 111
>gb|CD022521.1|CD022521 NXPV_058_H05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_058_H05 5', mRNA sequence
Length = 122
Score = 51.0 bits (105), Expect = 8e-006
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1 / +2
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYNVTKF 478
S SKVY+L EV++HN CWLV GGK +VT+F
Sbjct: 20 SDSKVYSLAEVSEHNYNKXCWLVNGGKXXDVTQF 121
Score = 35.0 bits (70), Expect = 0.56
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2 / -3
Query: 479 NLVTLYTLPPMTSQQSSLVLCLATSSRVYTLDPD 580
N VT PP+TSQQ L LC TS+R T + +
Sbjct: 120 NWVTSXXFPPLTSQQXLL*LCSETSARE*TFESE 19
>gb|BQ700459.1|BQ700459 NXRV105_H11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV105_H11 5', mRNA sequence
Length = 540
Score = 50.1 bits (103), Expect = 2e-005
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = -1 / +1
Query: 567 VYTLEEVAKHNTKDDCWLVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDD 412
VY L V++ N + DC LVIGGKVY+ T++ E P G ++L T A D
Sbjct: 382 VYCLATVSELNDRTDC*LVIGGKVYDDTQYSEXLPIGXELLXXXTVXXAIXD 537
>gb|CX645336.1|CX645336 COLD1_2_B07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_2_B07_A029 3', mRNA sequence
Length = 728
Score = 50.1 bits (103), Expect = 2e-005
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -1 / +2
Query: 438 STAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
++ +DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 2 ASGRDATRDFEDVGHSPAAKGMLDNYLVGVLE 97
Score = 35.0 bits (70), Expect(2) = 0.004
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 123 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 13
Score = 24.9 bits (48), Expect(2) = 0.004
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 276 LNRKAAPTITRGTRNSIILM 217
>gb|DR098688.1|DR098688 STRR1_47_F01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_47_F01_A033 3', mRNA sequence
Length = 743
Score = 50.1 bits (103), Expect = 2e-005
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -1 / +3
Query: 438 STAKDATDDFEDVGHSSTARAMMDEYLVGEID 343
++ +DAT DFEDVGHS A+ M+D YLVG ++
Sbjct: 6 ASGRDATRDFEDVGHSPAAKGMLDNYLVGVLE 101
Score = 35.0 bits (70), Expect(2) = 0.004
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSKSSVAS 427
FT + S +PTK S I A LCPTSSKS VAS
Sbjct: 127 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSKSLVAS 17
Score = 24.9 bits (48), Expect(2) = 0.004
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 280 LNRKAAPTITRGTRNSIILM 221
>gb|DN611322.1|DN611322 EST964372 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB063, mRNA sequence
Length = 653
Score = 49.6 bits (102), Expect = 2e-005
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -1 / +1
Query: 528 DDCWLVIGGKVYNVTKFLEDHPGGDDVLLSS 436
+DCWL+I GKVY+VT ++ HPGG +LL +
Sbjct: 13 NDCWLIIWGKVYDVTSWVPRHPGGSLILLKA 105
>gb|DN611615.1|DN611615 EST964665 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB459, mRNA sequence
Length = 653
Score = 49.6 bits (102), Expect = 2e-005
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -1 / +1
Query: 528 DDCWLVIGGKVYNVTKFLEDHPGGDDVLLSS 436
+DCWL+I GKVY+VT ++ HPGG +LL +
Sbjct: 13 NDCWLIIWGKVYDVTSWVPRHPGGSLILLKA 105
>gb|CD022474.1|CD022474 NXPV_056_E03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_056_E03 5' similar to Arabidopsis
thaliana sequence At5g48810 cytochrome b5
(dbj|BAA74840.1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 160
Score = 48.7 bits (100), Expect = 4e-005
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -1 / +1
Query: 579 SGSKVYTLEEVAKHNTKDDCWLVIGGKVYN 490
S KVY+L EV++HN DCWLVIGG Y+
Sbjct: 70 SDPKVYSLAEVSEHNYSKDCWLVIGGXXYD 159
Score = 35.4 bits (71), Expect = 0.41
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 494 YTLPPMTSQQSSLVLCLATSSR 559
Y PPMTSQQS L LC TS+R
Sbjct: 155 YXXPPMTSQQSLL*LCSETSAR 90
>gb|DR013942.1|DR013942 HEAT1_22_A11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_22_A11_A029 5', mRNA sequence
Length = 749
Score = 48.7 bits (100), Expect = 4e-005
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -1 / +3
Query: 303 KQPHYNQDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
KQ H N KT + V KIL F +PLA LGLA+ V +Y K
Sbjct: 81 KQAHNNSGKTVDSVSKILPFAIPLAFLGLAIVVCIYVK 194
>gb|BQ701432.1|BQ701432 NXSI_064_B03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_064_B03 5', mRNA sequence
Length = 367
Score = 48.3 bits (99), Expect = 6e-005
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -1 / +1
Query: 255 ILQFLVPLAILGLAVAVRMYTKS 187
ILQFLVPLAILGLAVAVR YTK+
Sbjct: 1 ILQFLVPLAILGLAVAVRFYTKT 69
>gb|BF518246.1|BF518246 NXSI_036_G07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_036_G07 5', mRNA sequence
Length = 482
Score = 38.6 bits (78), Expect(2) = 2e-004
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -1 / +1
Query: 426 DATDDFEDVGHSSTARAMMDEYLVG 352
DAT+ FE VGHS ARA++ Y +G
Sbjct: 160 DATEKFEKVGHSDNARALLKPYCIG 234
Score = 25.8 bits (50), Expect(2) = 2e-004
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -1 / +2
Query: 471 DHPGGDDVLLSSTAKDA 421
+HPGG D+LL+++ + A
Sbjct: 2 EHPGGYDILLNASGEKA 52
>gb|BQ702085.1|BQ702085 NXSI_124_D10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_124_D10 5', mRNA sequence
Length = 236
Score = 44.1 bits (90), Expect = 0.001
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -1 / +2
Query: 264 VIKILQFLVPLAILGLAVAVRMYTKS 187
+I+ILQFLVPLAI GL VAVR TK+
Sbjct: 2 IIRILQFLVPLAIXGLXVAVRXXTKT 79
>gb|DR054712.1|DR054712 RTCA1_19_C01.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_19_C01_A029 3', mRNA sequence
Length = 715
Score = 42.3 bits (86), Expect = 0.003
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1 / +1
Query: 414 DFEDVGHSSTARAMMDEYLVGEID 343
DFEDVGHS A+ M+D YLVG ++
Sbjct: 1 DFEDVGHSPAAKGMLDNYLVGVLE 72
Score = 28.6 bits (56), Expect(2) = 0.27
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2 / -3
Query: 317 FTLVGIVAASISPTKYSSIIARAVLLCPTSSK 412
FT + S +PTK S I A LCPTSSK
Sbjct: 98 FTETTPLKPSRTPTK*LSSIPLAAGLCPTSSK 3
Score = 24.9 bits (48), Expect(2) = 0.27
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / -3
Query: 203 LTATARPSIARGTKNWRILM 262
L A P+I RGT+N ILM
Sbjct: 251 LNRKAAPTITRGTRNSIILM 192
>gb|CF473042.1|CF473042 RTDS1_1_D01.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_1_D01_A015 3', mRNA sequence
Length = 563
Score = 41.4 bits (84), Expect = 0.007
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -1 / +1
Query: 516 LVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
++I G +++V+KF+++HPGG ++ KDAT F
Sbjct: 40 VLIAGFIHDVSKFMDEHPGGRHLIAKMIGKDATTAF 147
>gb|CF473108.1|CF473108 RTDS1_1_D01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_1_D01_A015 5', mRNA sequence
Length = 717
Score = 41.4 bits (84), Expect = 0.007
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -1 / +3
Query: 516 LVIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 409
++I G +++V+KF+++HPGG ++ KDAT F
Sbjct: 234 VLIAGFIHDVSKFMDEHPGGRHLIAKMIGKDATTAF 341
>gb|CF474657.1|CF474657 RTWW2_7_H02.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_7_H02_A021 3', mRNA sequence
Length = 557
Score = 38.6 bits (78), Expect = 0.044
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +3
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 72 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 167
>gb|CX652425.1|CX652425 COLD1_59_A12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_A12_A029 3', mRNA sequence
Length = 510
Score = 38.6 bits (78), Expect = 0.044
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1 / +1
Query: 285 QDKTQEFVIKILQFLVPLAILGLAVAVRMYTK 190
+D F K+LQFLVPL I+G+A +R + K
Sbjct: 79 KDNQPSFFTKLLQFLVPLLIVGVAFGIRSFLK 174
>gb|CF665517.1|CF665517 RTCNT1_16_B05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_16_B05_A029 5', mRNA sequence
Length = 548
Score = 29.5 bits (58), Expect(2) = 0.51
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1 / +2
Query: 453 DVLLSSTAKDATDDFEDVGHSSTAR 379
++ ++ T TDD DVGHSS AR
Sbjct: 350 NIAVAHTPDVVTDDVADVGHSSHAR 424
Score = 23.1 bits (44), Expect(2) = 0.51
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 574 IQGVHPRGGGQAQHQ 530
I+ +HPRGG Q Q +
Sbjct: 205 IRALHPRGGLQRQRR 249
>gb|CO411541.1|CO411541 EST841926 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALL58 5' end, mRNA sequence
Length = 797
Score = 34.1 bits (68), Expect = 1.1
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 519 SSRPWCCAWPPP 554
SSRPW C WPPP
Sbjct: 702 SSRPWPCPWPPP 667
>gb|CO412261.1|CO412261 EST842646 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALV03 5' end, mRNA sequence
Length = 884
Score = 34.1 bits (68), Expect = 1.1
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 519 SSRPWCCAWPPP 554
SSRPW C WPPP
Sbjct: 702 SSRPWPCPWPPP 667
>gb|CX649765.1|CX649765 COLD1_41_H03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_H03_A029 3', mRNA sequence
Length = 780
Score = 34.1 bits (68), Expect = 1.1
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +3 / -3
Query: 495 TPCRR*RASSRPWCCAWPPPR 557
TP R *RAS R W C PPPR
Sbjct: 523 TPARC*RASRRRWFC*TPPPR 461
Score = 30.9 bits (61), Expect = 9.7
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3 / +3
Query: 556 RGGGQAQHQGRLLARHRRQGVQ 491
RGGG Q+Q R LAR +R GV+
Sbjct: 462 RGGGVQQNQRRRLARQQRAGVR 527
>gb|DR013562.1|DR013562 HEAT1_20_C09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_C09_A029 3', mRNA sequence
Length = 775
Score = 34.1 bits (68), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3 / +1
Query: 474 PETWSHCTPCRR*RASSRPWCCAWPPP 554
P WS CT R RAS RP PPP
Sbjct: 13 PRPWSRCT*ANRSRASPRPRPATSPPP 93
>gb|DR013639.1|DR013639 HEAT1_20_C09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_C09_A029 5', mRNA sequence
Length = 825
Score = 34.1 bits (68), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3 / +1
Query: 474 PETWSHCTPCRR*RASSRPWCCAWPPP 554
P WS CT R RAS RP PPP
Sbjct: 88 PRPWSRCT*ANRSRASPRPRPATSPPP 168
>gb|DR166017.1|DR166017 RTPHOS1_8_F09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_F09_A029 5', mRNA sequence
Length = 860
Score = 34.1 bits (68), Expect = 1.1
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 519 SSRPWCCAWPPP 554
SSRPW C WPPP
Sbjct: 540 SSRPWPCPWPPP 505
>gb|DT625884.1|DT625884 EST1157808 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA474 5' end, mRNA sequence
Length = 937
Score = 34.1 bits (68), Expect = 1.1
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -2
Query: 519 SSRPWCCAWPPP 554
SSRPW C WPPP
Sbjct: 702 SSRPWPCPWPPP 667
>gb|DN615491.1|DN615491 EST968541 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSACG69, mRNA sequence
Length = 547
Score = 33.6 bits (67), Expect = 1.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1 / +3
Query: 492 NVTKFLEDHPGGDDVLLSSTAKDATDDF 409
+VT++L HPGGD +L+ +D TD F
Sbjct: 3 DVTEWLHKHPGGDLPILNLGGQDVTDAF 86
>gb|CO164717.1|CO164717 FLD1_49_G08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_49_G08_A029 5', mRNA sequence
Length = 840
Score = 33.1 bits (66), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3 / +1
Query: 477 ETWSHCTPCRR*RASSRPWCCAWPP 551
E +SH + CRR + +R C +WPP
Sbjct: 277 EGFSHMSSCRRRQGKARSLCRSWPP 351
>gb|CX650657.1|CX650657 COLD1_47_E09.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_E09_A029 3', mRNA sequence
Length = 729
Score = 33.1 bits (66), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 477 ETWSHCTPCRR*RASSRPWCCAWPP 551
E +SH + CRR + +R C +WPP
Sbjct: 159 EGFSHMSSCRRRQGKARSLCRSWPP 85
>gb|DR692349.1|DR692349 EST1082437 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADL15 3' end, mRNA sequence
Length = 849
Score = 33.1 bits (66), Expect = 2.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3 / -1
Query: 270 PGSCPGCSAAAWGACTSPWWVSWLH 344
PG C + G C+ WW S+LH
Sbjct: 615 PGECQCILGSTSGCCSKKWWPSYLH 541
>gb|DT637231.1|DT637231 EST1152162 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH120 3' end, mRNA sequence
Length = 886
Score = 33.1 bits (66), Expect = 2.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3 / -3
Query: 270 PGSCPGCSAAAWGACTSPWWVSWLH 344
PG C + G C+ WW S+LH
Sbjct: 623 PGECQCILGSTSGCCSKKWWPSYLH 549
>gb|DR109995.1|DR109995 RTS1_1_E12.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_1_E12_A029 3', mRNA sequence
Length = 720
Score = 26.7 bits (52), Expect(2) = 2.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3 / +2
Query: 271 GVRHQDPPVFGPPRNTGSGRRCKDV 197
G+R DP P R S RR KDV
Sbjct: 143 GIRSLDPSTLKPSRTAESLRRDKDV 217
Score = 23.5 bits (45), Expect(2) = 2.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / +1
Query: 322 GEVHAPQAAALQPGQDPGVRH 260
G H Q+ AL PG G RH
Sbjct: 55 GPRHGAQSLALGPGHRRGGRH 117
>gb|DR109397.1|DR109397 RTS1_1_E12.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_1_E12_A029 5', mRNA sequence
Length = 688
Score = 26.7 bits (52), Expect(2) = 2.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3 / +1
Query: 271 GVRHQDPPVFGPPRNTGSGRRCKDV 197
G+R DP P R S RR KDV
Sbjct: 436 GIRSLDPSTLKPSRTAESLRRDKDV 510
Score = 23.5 bits (45), Expect(2) = 2.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / +3
Query: 322 GEVHAPQAAALQPGQDPGVRH 260
G H Q+ AL PG G RH
Sbjct: 348 GPRHGAQSLALGPGHRRGGRH 410
>gb|DR071442.1|DR071442 RTDK1_19_H08.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_H08_A029 5', mRNA sequence
Length = 420
Score = 25.4 bits (49), Expect(2) = 2.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3 / +1
Query: 486 SHCTPCRR*RASSRPWCCAWPPPRGCTP 569
S C+ R R S W PP GC+P
Sbjct: 187 SCCSSSRTKRPS*TKWWSLAPPSLGCSP 270
Score = 24.9 bits (48), Expect(2) = 2.3
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3 / +1
Query: 336 WLHQSHPLSTRPSLHGQCCCAPHLRNHR 419
WL HP R S + C +P HR
Sbjct: 34 WLQDPHPTGYRYSCNSSLCYSPPHCFHR 117
>gb|CO362292.1|CO362292 RTK1_2_D06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_2_D06_A029 5', mRNA sequence
Length = 765
Score = 28.6 bits (56), Expect(2) = 2.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1 / -2
Query: 397 PHIFEIIGSILGSGRQQNIIASRVILQKL 483
PH+ ++ + G+GR+Q + + V+LQ L
Sbjct: 236 PHLARVLQELGGAGRRQAVALAVVVLQAL 150
Score = 23.5 bits (45), Expect(2) = 2.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3 / -1
Query: 207 QRRPDPVLRGGPKTGGS**RTPGSCPGC 290
+RR P R GP GS* G+ P C
Sbjct: 651 RRRCAPRWRAGPTRPGS*RCRAGTWPSC 568
>gb|CX713112.1|CX713112 RTPQ1_7_C07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_7_C07_A032 3', mRNA sequence
Length = 859
Score = 32.7 bits (65), Expect = 2.7
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -1 / -1
Query: 459 GDDVLLSSTAKDATDDFEDVGHSSTARAMMDEYLVGEIDAATIPTKVKYTPPKQPHYNQD 280
GD V + S A+ + + V ++STAR + + + +DA P P Y
Sbjct: 505 GDQVQVVSNARFKSVEHRAVTNASTARISIPTFFIPAMDAFVSPASSLVDEQHPPMYRGY 326
Query: 279 KTQEF 265
K +EF
Sbjct: 325 KFEEF 311
>gb|DR119695.1|DR119695 RTMG1_24_G12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_24_G12_A029 5', mRNA sequence
Length = 715
Score = 29.9 bits (59), Expect(2) = 3.2
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 6 FFFFF*RKNRSDFILIDVR 62
FFFFF* K R D IL VR
Sbjct: 714 FFFFF*SKQRIDIILTGVR 658
Score = 21.7 bits (41), Expect(2) = 3.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2 / -3
Query: 515 SQQSSLVLCLATSSR 559
S QSSLVL +A +SR
Sbjct: 98 SFQSSLVLAMACASR 54
>gb|CF387735.1|CF387735 RTDR1_19_H02.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_H02_A015 5', mRNA
sequence
Length = 513
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 510 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 403
>gb|CF401707.1|CF401707 RTWW1_14_G08.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_G08_A015 5', mRNA sequence
Length = 729
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 590 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 483
>gb|CF472298.1|CF472298 RTDS1_9_D09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_D09_A015 3', mRNA sequence
Length = 612
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 227 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 120
>gb|CF669922.1|CF669922 RTCNT1_46_H11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_46_H11_A029 5', mRNA sequence
Length = 802
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 213 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 106
>gb|CN783675.1|CN783675 EST782366 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAB68 5' end, mRNA sequence
Length = 767
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 513 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 406
>gb|CO409161.1|CO409161 EST839546 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKM22 5' end, mRNA sequence
Length = 919
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 322 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 215
>gb|CO409238.1|CO409238 EST839623 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKN23 5' end, mRNA sequence
Length = 958
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 585 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 478
>gb|CO409288.1|CO409288 EST839673 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKN83 5' end, mRNA sequence
Length = 922
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 585 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 478
>gb|CO409721.1|CO409721 EST840106 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKT67 5' end, mRNA sequence
Length = 922
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 585 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 478
>gb|CO409876.1|CO409876 EST840261 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKV67 5' end, mRNA sequence
Length = 911
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 585 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 478
>gb|CO410010.1|CO410010 EST840395 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKX55 5' end, mRNA sequence
Length = 856
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 584 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 477
>gb|CO410259.1|CO410259 EST840644 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAL073 5' end, mRNA sequence
Length = 769
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 185 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 78
>gb|CO410364.1|CO410364 EST840749 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAL217 5' end, mRNA sequence
Length = 846
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 574 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 467
>gb|CO410846.1|CO410846 EST841231 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALC59 5' end, mRNA sequence
Length = 713
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 441 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 334
>gb|CO411307.1|CO411307 EST841692 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALI52 5' end, mRNA sequence
Length = 772
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 191 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 84
>gb|CO412517.1|CO412517 EST842902 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALY34 5' end, mRNA sequence
Length = 781
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 509 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 402
>gb|CO412934.1|CO412934 EST843319 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAM395 5' end, mRNA sequence
Length = 743
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 322 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 215
>gb|CO413743.1|CO413743 EST844128 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAME80 5' end, mRNA sequence
Length = 857
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 585 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 478
>gb|CO414220.1|CO414220 EST844605 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAML47 5' end, mRNA sequence
Length = 894
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 322 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 215
>gb|CO363396.1|CO363396 RTK1_9_B05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_9_B05_A029 5', mRNA sequence
Length = 637
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 528 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 421
>gb|CO363563.1|CO363563 RTK1_10_B05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_B05_A029 5', mRNA sequence
Length = 764
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 547 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 440
>gb|CV134769.1|CV134769 EST845978 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICCF22 5' end, mRNA sequence
Length = 788
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 517 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 410
>gb|CV136880.1|CV136880 EST848089 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAH48 5' end, mRNA sequence
Length = 717
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 549 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 442
>gb|CV137817.1|CV137817 EST849026 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAV03 5' end, mRNA sequence
Length = 808
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 594 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 487
>gb|CV138341.1|CV138341 EST849550 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB202 5' end, mRNA sequence
Length = 789
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 526 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 419
>gb|CV138786.1|CV138786 EST849995 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB726 5' end, mRNA sequence
Length = 834
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 558 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 451
>gb|CV138923.1|CV138923 EST850132 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB890 5' end, mRNA sequence
Length = 777
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 582 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 475
>gb|CV145279.1|CV145279 EST856488 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDG50 5' end, mRNA sequence
Length = 801
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 529 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 422
>gb|CV145623.1|CV145623 EST856832 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDK78 5' end, mRNA sequence
Length = 801
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 529 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 422
>gb|CV146172.1|CV146172 EST857381 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDT38 5' end, mRNA sequence
Length = 803
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 527 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 420
>gb|CV146612.1|CV146612 EST857821 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDY35 5' end, mRNA sequence
Length = 757
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 543 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 436
>gb|CV146774.1|CV146774 EST857983 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIE015 5' end, mRNA sequence
Length = 771
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 586 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 479
>gb|CV146811.1|CV146811 EST858020 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIE056 5' end, mRNA sequence
Length = 818
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 546 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 439
>gb|CV147876.1|CV147876 EST859085 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEC07 5' end, mRNA sequence
Length = 738
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 563 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 456
>gb|CV147911.1|CV147911 EST859120 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEC48 5' end, mRNA sequence
Length = 842
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 570 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 463
>gb|CV147964.1|CV147964 EST859173 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIED07 5' end, mRNA sequence
Length = 764
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 492 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 385
>gb|CX651907.1|CX651907 COLD1_55_D04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_55_D04_A029 5', mRNA sequence
Length = 744
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 196 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 89
>gb|DN446236.1|DN446236 EST942035 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBF47 5' end, mRNA sequence
Length = 605
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 393 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 286
>gb|DN446368.1|DN446368 EST942167 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBG88 5' end, mRNA sequence
Length = 921
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 322 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 215
>gb|DN446627.1|DN446627 EST942426 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBJ77 5' end, mRNA sequence
Length = 772
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 191 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 84
>gb|DN446863.1|DN446863 EST942662 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBM50 5' end, mRNA sequence
Length = 920
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 322 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 215
>gb|DN447460.1|DN447460 EST943259 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBT23 5' end, mRNA sequence
Length = 573
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 509 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 402
>gb|DN447570.1|DN447570 EST943369 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBU44 5' end, mRNA sequence
Length = 848
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 576 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 469
>gb|DN449490.1|DN449490 EST945289 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPICI36 5' end, mRNA sequence
Length = 610
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 585 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 478
>gb|DN450288.1|DN450288 EST946087 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEO06 5' end, mRNA sequence
Length = 796
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 526 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 419
>gb|DN450697.1|DN450697 EST946496 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIES90 5' end, mRNA sequence
Length = 767
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 553 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 446
>gb|DN451323.1|DN451323 EST947122 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIF254 5' end, mRNA sequence
Length = 868
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 596 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 489
>gb|DN452655.1|DN452655 EST948454 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFK44 5' end, mRNA sequence
Length = 872
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 567 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 460
>gb|DN453015.1|DN453015 EST948814 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFO38 5' end, mRNA sequence
Length = 935
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 502 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 395
>gb|DN455255.1|DN455255 EST951054 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGC32 5' end, mRNA sequence
Length = 874
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 567 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 460
>gb|DN455593.1|DN455593 EST951392 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGF91 5' end, mRNA sequence
Length = 799
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 527 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 420
>gb|DN456475.1|DN456475 EST952274 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGP40 5' end, mRNA sequence
Length = 742
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 567 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 460
>gb|DN456499.1|DN456499 EST952298 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGP64 5' end, mRNA sequence
Length = 856
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 579 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 472
>gb|DN456902.1|DN456902 EST952701 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGU06 5' end, mRNA sequence
Length = 712
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 544 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 437
>gb|DN458208.1|DN458208 EST954007 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIH930 5' end, mRNA sequence
Length = 854
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 549 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 442
>gb|DN459666.1|DN459666 EST955465 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHP68 5' end, mRNA sequence
Length = 839
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 567 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 460
>gb|DN460666.1|DN460666 EST956465 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII117 5' end, mRNA sequence
Length = 855
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 583 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 476
>gb|DN460883.1|DN460883 EST956682 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII367 5' end, mRNA sequence
Length = 834
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -3
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 565 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 458
>gb|DN461056.1|DN461056 EST956855 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII582 5' end, mRNA sequence
Length = 815
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 545 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 438
>gb|DN461758.1|DN461758 EST957557 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIIE06 5' end, mRNA sequence
Length = 848
Score = 32.2 bits (64), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 322 GEVHAPQAAALQPGQDPGVRHQDPPVFGPPRNTGSG 215
G++H + A G + + H+ PP P+N+G G
Sbjct: 634 GQIHGEEKAEEIEGPEHKIGHRQPPAEAEPQNSGRG 527
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 394,973,484
Number of Sequences: 355925
Number of extensions: 6625269
Number of successful extensions: 67781
Number of sequences better than 10.0: 390
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9435587875
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)