TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.160
(878 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF670504.1|CF670504 RTCNT1_50_D12.g1_A029 Root control P... 261 4e-069
gb|CO171695.1|CO171695 NDL1_23_G04.g1_A029 Needles control ... 261 4e-069
gb|CO364850.1|CO364850 RTK1_22_E03.b1_A029 Roots minus pota... 261 4e-069
gb|CO364935.1|CO364935 RTK1_22_E03.g1_A029 Roots minus pota... 261 4e-069
gb|DR745688.1|DR745688 RTCU1_31_D11.g1_A029 Roots plus adde... 261 4e-069
gb|CF478186.1|CF478186 RTWW3_19_E06.g1_A022 Well-watered lo... 260 8e-069
gb|CO175842.1|CO175842 NDL1_57_A05.g1_A029 Needles control ... 260 8e-069
gb|CO363133.1|CO363133 RTK1_7_G06.g1_A029 Roots minus potas... 260 8e-069
gb|CO363696.1|CO363696 RTK1_11_F12.b1_A029 Roots minus pota... 260 8e-069
gb|CO363785.1|CO363785 RTK1_11_F12.g1_A029 Roots minus pota... 260 8e-069
gb|CO366493.1|CO366493 RTK1_28_E02.b1_A029 Roots minus pota... 260 8e-069
gb|CX652009.1|CX652009 COLD1_56_G01.b1_A029 Root cold Pinus... 257 7e-068
gb|CX652078.1|CX652078 COLD1_56_G01.g1_A029 Root cold Pinus... 257 7e-068
gb|CF397323.1|CF397323 RTDS3_2_H02.g1_A022 Drought-stressed... 256 2e-067
gb|BX682564.1|BX682564 BX682564 Pinus pinaster differenciat... 256 2e-067
gb|DR686009.1|DR686009 EST1076086 Normalized pine embryo li... 255 3e-067
gb|DT632958.1|DT632958 EST1147889 Normalized pine embryo li... 255 3e-067
gb|CO362062.1|CO362062 NDL2_8_H12.g1_A029 Needles control 2... 212 9e-064
gb|DR101422.1|DR101422 STRR1_73_B05.b1_A033 Stem Response R... 243 1e-063
gb|CR393042.1|CR393042 CR393042 RN Pinus pinaster cDNA clon... 226 2e-058
gb|CO363046.1|CO363046 RTK1_7_G06.b1_A029 Roots minus potas... 205 4e-052
gb|CO175778.1|CO175778 NDL1_57_A05.b1_A029 Needles control ... 193 2e-048
gb|DR013966.1|DR013966 HEAT1_22_D04.g1_A029 Root at 37 C fo... 157 3e-048
gb|CF478135.1|CF478135 RTWW3_19_E06.b1_A022 Well-watered lo... 175 3e-043
gb|CO197709.1|CO197709 GEO1_8_A12.g1_A029 Root gravitropism... 170 2e-041
gb|BQ196920.1|BQ196920 NXLV107_A12_F NXLV (Nsf Xylem Late w... 162 3e-039
gb|DR013882.1|DR013882 HEAT1_22_D04.b1_A029 Root at 37 C fo... 157 8e-038
gb|CF670430.1|CF670430 RTCNT1_50_D12.b1_A029 Root control P... 136 2e-035
gb|BX250783.1|BX250783 BX250783 Pinus pinaster differenciat... 135 3e-031
gb|BM157918.1|BM157918 NXLV_027_A10_F NXLV (Nsf Xylem Late ... 129 2e-029
gb|DR094156.1|DR094156 STRR1_12_F11.g1_A033 Stem Response R... 85 5e-024
gb|DR094075.1|DR094075 STRR1_12_F11.b1_A033 Stem Response R... 85 5e-024
>gb|CF670504.1|CF670504 RTCNT1_50_D12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_50_D12_A029 5', mRNA sequence
Length = 746
Score = 261 bits (565), Expect = 4e-069
Identities = 110/140 (78%), Positives = 120/140 (85%)
Frame = -3 / +3
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKG CVIAG
Sbjct: 126 EKRKMMMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGFCVIAG 305
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 306 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 485
Query: 447 DKLKSDYDQVVTEVAEATSA 388
KLK DY++VV EV E ++
Sbjct: 486 KKLKEDYNEVVKEVRELATS 545
Score = 179 bits (386), Expect = 2e-044
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NPLFP
Sbjct: 454 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQNPLFP 275
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG A+
Sbjct: 274 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAI 155
Score = 112 bits (239), Expect = 4e-024
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1 / -1
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ ++V QF + L T+ ++ + T PLS SC RKILF* NIY+ NI F T
Sbjct: 524 FLHHFIVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSSSCTRKILF*RNIYIWNIGFFTQ 345
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FD AL+ L LG +S+ELEG LAELL E
Sbjct: 344 NRYMCDNINW*DVPSNNTKSFISPPDGLHHFFDPALQTLGLGSASNELEGSLAELLPRER 165
Query: 769 FRD 777
D
Sbjct: 164 ASD 156
>gb|CO171695.1|CO171695 NDL1_23_G04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_23_G04_A029 5', mRNA sequence
Length = 760
Score = 261 bits (565), Expect = 4e-069
Identities = 110/140 (78%), Positives = 120/140 (85%)
Frame = -3 / -2
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKG CVIAG
Sbjct: 675 EKRKMMMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGFCVIAG 496
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 495 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 316
Query: 447 DKLKSDYDQVVTEVAEATSA 388
KLK DY++VV EV E ++
Sbjct: 315 KKLKEDYNEVVKEVRELATS 256
Score = 179 bits (386), Expect = 2e-044
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / +2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NPLFP
Sbjct: 347 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQNPLFP 526
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG A+
Sbjct: 527 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAI 646
Score = 112 bits (239), Expect = 4e-024
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1 / +1
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ ++V QF + L T+ ++ + T PLS SC RKILF* NIY+ NI F T
Sbjct: 277 FLHHFIVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSSSCTRKILF*RNIYIWNIGFFTQ 456
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FD AL+ L LG +S+ELEG LAELL E
Sbjct: 457 NRYMCDNINW*DVPSNNTKSFISPPDGLHHFFDPALQTLGLGSASNELEGSLAELLPRER 636
Query: 769 FRD 777
D
Sbjct: 637 ASD 645
>gb|CO364850.1|CO364850 RTK1_22_E03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_22_E03_A029 3', mRNA sequence
Length = 860
Score = 261 bits (565), Expect = 4e-069
Identities = 110/140 (78%), Positives = 120/140 (85%)
Frame = -3 / -1
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKG CVIAG
Sbjct: 665 EKRKMMMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGFCVIAG 486
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 485 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 306
Query: 447 DKLKSDYDQVVTEVAEATSA 388
KLK DY++VV EV E ++
Sbjct: 305 KKLKEDYNEVVKEVRELATS 246
Score = 179 bits (386), Expect = 2e-044
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / +1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NPLFP
Sbjct: 337 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQNPLFP 516
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG A+
Sbjct: 517 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAI 636
Score = 112 bits (239), Expect = 4e-024
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1 / +3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ ++V QF + L T+ ++ + T PLS SC RKILF* NIY+ NI F T
Sbjct: 267 FLHHFIVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSSSCTRKILF*RNIYIWNIGFFTQ 446
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FD AL+ L LG +S+ELEG LAELL E
Sbjct: 447 NRYMCDNINW*DVPSNNTKSFISPPDGLHHFFDPALQTLGLGSASNELEGSLAELLPRER 626
Query: 769 FRD 777
D
Sbjct: 627 ASD 635
>gb|CO364935.1|CO364935 RTK1_22_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_22_E03_A029 5', mRNA sequence
Length = 857
Score = 261 bits (565), Expect = 4e-069
Identities = 110/140 (78%), Positives = 120/140 (85%)
Frame = -3 / -2
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKG CVIAG
Sbjct: 667 EKRKMMMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGFCVIAG 488
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 487 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 308
Query: 447 DKLKSDYDQVVTEVAEATSA 388
KLK DY++VV EV E ++
Sbjct: 307 KKLKEDYNEVVKEVRELATS 248
Score = 179 bits (386), Expect = 2e-044
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / +3
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NPLFP
Sbjct: 339 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQNPLFP 518
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG A+
Sbjct: 519 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAI 638
Score = 112 bits (239), Expect = 4e-024
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1 / +2
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ ++V QF + L T+ ++ + T PLS SC RKILF* NIY+ NI F T
Sbjct: 269 FLHHFIVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSSSCTRKILF*RNIYIWNIGFFTQ 448
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FD AL+ L LG +S+ELEG LAELL E
Sbjct: 449 NRYMCDNINW*DVPSNNTKSFISPPDGLHHFFDPALQTLGLGSASNELEGSLAELLPRER 628
Query: 769 FRD 777
D
Sbjct: 629 ASD 637
>gb|DR745688.1|DR745688 RTCU1_31_D11.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_31_D11_A029 5', mRNA sequence
Length = 766
Score = 261 bits (565), Expect = 4e-069
Identities = 110/140 (78%), Positives = 120/140 (85%)
Frame = -3 / +3
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKG CVIAG
Sbjct: 243 EKRKMMMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGFCVIAG 422
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 423 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 602
Query: 447 DKLKSDYDQVVTEVAEATSA 388
KLK DY++VV EV E ++
Sbjct: 603 KKLKEDYNEVVKEVRELATS 662
Score = 179 bits (386), Expect = 2e-044
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NPLFP
Sbjct: 571 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQNPLFP 392
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG A+
Sbjct: 391 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAI 272
Score = 112 bits (239), Expect = 4e-024
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1 / -3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ ++V QF + L T+ ++ + T PLS SC RKILF* NIY+ NI F T
Sbjct: 641 FLHHFIVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSSSCTRKILF*RNIYIWNIGFFTQ 462
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FD AL+ L LG +S+ELEG LAELL E
Sbjct: 461 NRYMCDNINW*DVPSNNTKSFISPPDGLHHFFDPALQTLGLGSASNELEGSLAELLPRER 282
Query: 769 FRD 777
D
Sbjct: 281 ASD 273
>gb|CF478186.1|CF478186 RTWW3_19_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_19_E06_A022 5', mRNA sequence
Length = 732
Score = 260 bits (563), Expect = 8e-069
Identities = 111/143 (77%), Positives = 119/143 (83%)
Frame = -3 / +3
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 183 EKRKMLMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 362
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 363 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 542
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 543 KKLKEDYSEVVKEVRELATPFF* 611
Score = 180 bits (387), Expect = 1e-044
Identities = 80/100 (80%), Positives = 82/100 (82%)
Frame = +2 / -3
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 511 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 332
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG AM
Sbjct: 331 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAM 212
Score = 119 bits (255), Expect = 2e-026
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1 / -2
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 581 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 402
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL E
Sbjct: 401 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELLPCER 222
Query: 769 FRD 777
D
Sbjct: 221 ASD 213
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +2
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 212 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 391
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 392 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 490
>gb|CO175842.1|CO175842 NDL1_57_A05.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_57_A05_A029 5', mRNA sequence
Length = 755
Score = 260 bits (563), Expect = 8e-069
Identities = 111/143 (77%), Positives = 119/143 (83%)
Frame = -3 / +1
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 175 EKRKMLMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 354
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 355 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 534
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 535 KKLKEDYSEVVKEVRELATPFF* 603
Score = 180 bits (387), Expect = 1e-044
Identities = 80/100 (80%), Positives = 82/100 (82%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 503 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 324
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG AM
Sbjct: 323 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAM 204
Score = 119 bits (255), Expect = 2e-026
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1 / -3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 573 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 394
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL E
Sbjct: 393 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELLPCER 214
Query: 769 FRD 777
D
Sbjct: 213 ASD 205
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 204 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 383
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 384 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 482
>gb|CO363133.1|CO363133 RTK1_7_G06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_G06_A029 5', mRNA sequence
Length = 813
Score = 260 bits (563), Expect = 8e-069
Identities = 111/143 (77%), Positives = 119/143 (83%)
Frame = -3 / +1
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 184 EKRKMLMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 363
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 364 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 543
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 544 KKLKEDYSEVVKEVRELATPFF* 612
Score = 180 bits (387), Expect = 1e-044
Identities = 80/100 (80%), Positives = 82/100 (82%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 512 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 333
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG AM
Sbjct: 332 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAM 213
Score = 119 bits (255), Expect = 2e-026
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1 / -1
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 582 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 403
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL E
Sbjct: 402 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELLPCER 223
Query: 769 FRD 777
D
Sbjct: 222 ASD 214
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 213 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 392
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 393 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 491
>gb|CO363696.1|CO363696 RTK1_11_F12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_F12_A029 3', mRNA sequence
Length = 861
Score = 260 bits (563), Expect = 8e-069
Identities = 111/143 (77%), Positives = 119/143 (83%)
Frame = -3 / +2
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 89 EKRKMLMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 268
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 269 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 448
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 449 KKLKEDYSEVVKEVRELATPFF* 517
Score = 180 bits (387), Expect = 1e-044
Identities = 80/100 (80%), Positives = 82/100 (82%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 417 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 238
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG AM
Sbjct: 237 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAM 118
Score = 119 bits (255), Expect = 2e-026
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1 / -3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 487 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 308
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL E
Sbjct: 307 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELLPCER 128
Query: 769 FRD 777
D
Sbjct: 127 ASD 119
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +1
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 118 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 297
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 298 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 396
>gb|CO363785.1|CO363785 RTK1_11_F12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_F12_A029 5', mRNA sequence
Length = 803
Score = 260 bits (563), Expect = 8e-069
Identities = 111/143 (77%), Positives = 119/143 (83%)
Frame = -3 / +2
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 275 EKRKMLMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 454
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 455 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 634
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 635 KKLKEDYSEVVKEVRELATPFF* 703
Score = 180 bits (387), Expect = 1e-044
Identities = 80/100 (80%), Positives = 82/100 (82%)
Frame = +2 / -3
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 603 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 424
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG AM
Sbjct: 423 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAM 304
Score = 119 bits (255), Expect = 2e-026
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1 / -2
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 673 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 494
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL E
Sbjct: 493 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELLPCER 314
Query: 769 FRD 777
D
Sbjct: 313 ASD 305
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +1
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 304 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 483
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 484 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 582
>gb|CO366493.1|CO366493 RTK1_28_E02.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_E02_A029 3', mRNA sequence
Length = 860
Score = 260 bits (563), Expect = 8e-069
Identities = 111/143 (77%), Positives = 119/143 (83%)
Frame = -3 / -1
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 680 EKRKMLMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 501
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 500 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 321
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 320 KKLKEDYSEVVKEVRELATPFF* 252
Score = 180 bits (387), Expect = 1e-044
Identities = 80/100 (80%), Positives = 82/100 (82%)
Frame = +2 / +1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 352 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 531
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG AM
Sbjct: 532 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAM 651
Score = 119 bits (255), Expect = 2e-026
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1 / +3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 282 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 461
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL E
Sbjct: 462 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELLPCER 641
Query: 769 FRD 777
D
Sbjct: 642 ASD 650
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / -3
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 651 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 472
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 471 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 373
>gb|CX652009.1|CX652009 COLD1_56_G01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_G01_A029 3', mRNA sequence
Length = 844
Score = 257 bits (556), Expect = 7e-068
Identities = 110/143 (76%), Positives = 118/143 (82%)
Frame = -3 / +1
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLK VRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 127 EKRKMLMLSPIARPLAGKKLCKRTLKPVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 306
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 307 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 486
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 487 KKLKEDYSEVVKEVRELATPFF* 555
Score = 178 bits (383), Expect = 5e-044
Identities = 79/100 (79%), Positives = 81/100 (81%)
Frame = +2 / -3
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 455 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 276
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRT LRV LQSFFPARG AM
Sbjct: 275 RLMDFTTSLTPRFKHLASEARRTGLRVLLQSFFPARGRAM 156
Score = 116 bits (248), Expect = 2e-025
Identities = 55/123 (44%), Positives = 77/123 (62%)
Frame = +1 / -2
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 525 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 346
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ LEG LAELL E
Sbjct: 345 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNGLEGSLAELLPCER 166
Query: 769 FRD 777
D
Sbjct: 165 ASD 157
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 156 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 335
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 336 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 434
>gb|CX652078.1|CX652078 COLD1_56_G01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_G01_A029 5', mRNA sequence
Length = 845
Score = 257 bits (556), Expect = 7e-068
Identities = 110/143 (76%), Positives = 118/143 (82%)
Frame = -3 / +3
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLK VRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 225 EKRKMLMLSPIARPLAGKKLCKRTLKPVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 404
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 405 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 584
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 585 KKLKEDYSEVVKEVRELATPFF* 653
Score = 178 bits (383), Expect = 5e-044
Identities = 79/100 (79%), Positives = 81/100 (81%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 553 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 374
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRT LRV LQSFFPARG AM
Sbjct: 373 RLMDFTTSLTPRFKHLASEARRTGLRVLLQSFFPARGRAM 254
Score = 116 bits (248), Expect = 2e-025
Identities = 55/123 (44%), Positives = 77/123 (62%)
Frame = +1 / -1
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 623 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 444
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ LEG LAELL E
Sbjct: 443 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNGLEGSLAELLPCER 264
Query: 769 FRD 777
D
Sbjct: 263 ASD 255
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +2
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 254 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 433
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 434 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 532
>gb|CF397323.1|CF397323 RTDS3_2_H02.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_H02_A022 5', mRNA sequence
Length = 754
Score = 256 bits (553), Expect = 2e-067
Identities = 109/140 (77%), Positives = 119/140 (85%)
Frame = -3 / +2
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKG CVIAG
Sbjct: 164 EKRKMMMLSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGFCVIAG 343
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPIL EEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 344 NISPIDVITHVPILREEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 523
Query: 447 DKLKSDYDQVVTEVAEATSA 388
KLK DY++VV EV E ++
Sbjct: 524 KKLKEDYNEVVKEVRELATS 583
Score = 178 bits (384), Expect = 4e-044
Identities = 80/100 (80%), Positives = 83/100 (83%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLVRTKTQ VGLLV PA ARSSFDGTY G ASS IGTCVITSIGE+FPAIT NPLFP
Sbjct: 492 GLVRTKTQHVGLLVAPAPARSSFDGTYIYGISASSRRIGTCVITSIGEMFPAITQNPLFP 313
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG A+
Sbjct: 312 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAI 193
Score = 112 bits (240), Expect = 3e-024
Identities = 54/123 (43%), Positives = 76/123 (61%)
Frame = +1 / -1
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ ++V QF + L T+ +N + T PLS SC RKILF* NIY+ NI F T
Sbjct: 562 FLHHFIVVLFQFFIFLLTKATFSRTCKN*NTTCWPLSSSCTRKILF*RNIYIWNIGFFTQ 383
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + + FD AL+ L LG +S+ELEG LAELL E
Sbjct: 382 NRYMCDNINW*DVPSNNTKSFISPPDGFHHFFDPALQTLGLGSASNELEGSLAELLPRER 203
Query: 769 FRD 777
D
Sbjct: 202 ASD 194
>gb|BX682564.1|BX682564 BX682564 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 118A06 similar to Coatomer beta' subunit,
mRNA sequence
Length = 622
Score = 256 bits (553), Expect = 2e-067
Identities = 109/136 (80%), Positives = 115/136 (84%)
Frame = -3 / +3
Query: 786 LMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDV 607
L IA+PLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAGNISPIDV
Sbjct: 9 LSPIARPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAGNISPIDV 188
Query: 606 ITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVKDKLKSDY 427
ITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E KLK DY
Sbjct: 189 ITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEEDKKLKEDY 368
Query: 426 DQVVTEVAEATSAMF* 379
+VV EV E + F*
Sbjct: 369 SEVVKEVRELATPFF* 416
Score = 178 bits (383), Expect = 5e-044
Identities = 79/100 (79%), Positives = 82/100 (82%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSF+GTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 316 GLVSTKTQHVGLLVAPAPARSSFEGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 137
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV LQSFFPARG AM
Sbjct: 136 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFPARGRAM 17
Score = 116 bits (249), Expect = 2e-025
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1 / -3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC RKILF* NIY+ N+ F T
Sbjct: 386 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTRKILF*RNIYIWNVGFFTQ 207
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL E
Sbjct: 206 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELLPCER 27
Query: 769 FRD 777
D
Sbjct: 26 ASD 18
Score = 106 bits (226), Expect = 2e-022
Identities = 47/93 (50%), Positives = 66/93 (70%)
Frame = -2 / +2
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 17 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 196
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICS KRGSC R+H*EA++L
Sbjct: 197 CTYFV*RSRHSIYICSFKRGSCGCRSH*EANML 295
>gb|DR686009.1|DR686009 EST1076086 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABB14 3' end, mRNA sequence
Length = 794
Score = 255 bits (552), Expect = 3e-067
Identities = 110/143 (76%), Positives = 118/143 (82%)
Frame = -3 / +1
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKL KRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 304 EKRKMLMLSPIARPLAGKKLYKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 483
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 484 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 663
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 664 KKLKEDYSEVVKEVRELATPFF* 732
Score = 176 bits (378), Expect = 3e-043
Identities = 79/100 (79%), Positives = 81/100 (81%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 632 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 453
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV L SFFPARG AM
Sbjct: 452 RLMDFTTSLTPRFKHLASEARRTSLRVLL*SFFPARGRAM 333
Score = 117 bits (251), Expect = 8e-026
Identities = 55/123 (44%), Positives = 77/123 (62%)
Frame = +1 / -3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 702 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 523
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG L ELL E
Sbjct: 522 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLVELLPCER 343
Query: 769 FRD 777
D
Sbjct: 342 ASD 334
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 333 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 512
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 513 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 611
>gb|DT632958.1|DT632958 EST1147889 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFP60 3' end, mRNA sequence
Length = 805
Score = 255 bits (552), Expect = 3e-067
Identities = 110/143 (76%), Positives = 118/143 (82%)
Frame = -3 / +3
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLAGKKL KRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAG
Sbjct: 312 EKRKMLMLSPIARPLAGKKLYKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAG 491
Query: 627 NISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVK 448
NISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E
Sbjct: 492 NISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEED 671
Query: 447 DKLKSDYDQVVTEVAEATSAMF* 379
KLK DY +VV EV E + F*
Sbjct: 672 KKLKEDYSEVVKEVRELATPFF* 740
Score = 176 bits (378), Expect = 3e-043
Identities = 79/100 (79%), Positives = 81/100 (81%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 640 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 461
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFPARGFAM 778
R M TTSLTPR +H ASEARRTSLRV L SFFPARG AM
Sbjct: 460 RLMDFTTSLTPRFKHLASEARRTSLRVLL*SFFPARGRAM 341
Score = 117 bits (251), Expect = 8e-026
Identities = 55/123 (44%), Positives = 77/123 (62%)
Frame = +1 / -3
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 710 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 531
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELLSSEG 768
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG L ELL E
Sbjct: 530 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLVELLPCER 351
Query: 769 FRD 777
D
Sbjct: 350 ASD 342
Score = 107 bits (229), Expect = 9e-023
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = -2 / +2
Query: 778 HRETPRWKEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYT 599
HR R +EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++T
Sbjct: 341 HRSPSRREEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHT 520
Query: 598 CSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
C+ +* S S+ ICSIKRGSC R+H*EA++L
Sbjct: 521 CTYFV*RSRHSIYICSIKRGSCRCRSH*EANML 619
>gb|CO362062.1|CO362062 NDL2_8_H12.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_H12_A029 5', mRNA sequence
Length = 806
Score = 212 bits (457), Expect(2) = 9e-064
Identities = 88/110 (80%), Positives = 95/110 (86%)
Frame = -3 / +1
Query: 717 ASEAKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKED 538
ASEAKCLKRGVKEVVKSIRRGNKG CVIAGNISPIDVITHVPILCEEA++PY+YVPSKED
Sbjct: 364 ASEAKCLKRGVKEVVKSIRRGNKGFCVIAGNISPIDVITHVPILCEEADIPYIYVPSKED 543
Query: 537 LATAGTTKRPTCCVLVLTKPNKGELSGEVKDKLKSDYDQVVTEVAEATSA 388
LA AG TKRPTCCVLVLT P KG LS E KLK DY++VV EV E ++
Sbjct: 544 LAGAGATKRPTCCVLVLTSPTKGSLSEEEDKKLKEDYNEVVKEVRELATS 693
Score = 144 bits (309), Expect(2) = 2e-039
Identities = 64/85 (75%), Positives = 66/85 (77%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NPLFP
Sbjct: 602 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQNPLFP 423
Query: 659 RRMLLTTSLTPRLRHFASEARRTSL 733
R M TTSLTPR +H ASEA L
Sbjct: 422 RLMDFTTSLTPRFKHLASEAENHEL 348
Score = 52.4 bits (108), Expect(2) = 9e-064
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / +3
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRR 718
EK+ + L IA+PLAGKKLCKRTLKLVRR
Sbjct: 186 EKRKMMMLSPIARPLAGKKLCKRTLKLVRR 275
Score = 39.1 bits (79), Expect(2) = 2e-039
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2 / -2
Query: 719 RRTSLRVRLQSFFPARGFAM 778
RRTSLRV LQSFFPARG A+
Sbjct: 274 RRTSLRVLLQSFFPARGRAI 215
>gb|DR101422.1|DR101422 STRR1_73_B05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_73_B05_A033 3', mRNA sequence
Length = 722
Score = 243 bits (526), Expect = 1e-063
Identities = 103/127 (81%), Positives = 108/127 (85%)
Frame = -3 / +3
Query: 759 GKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCE 580
GKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAGNISPIDVITHVPILCE
Sbjct: 3 GKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAGNISPIDVITHVPILCE 182
Query: 579 EANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVKDKLKSDYDQVVTEVAE 400
EA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E KLK DY +VV EV E
Sbjct: 183 EADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEEDKKLKEDYSEVVKEVRE 362
Query: 399 ATSAMF* 379
+ F*
Sbjct: 363 LATPFF* 383
Score = 170 bits (366), Expect = 1e-041
Identities = 75/94 (79%), Positives = 77/94 (81%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 283 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 104
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFP 760
R M TTSLTPR +H ASEARRTSLRV LQSFFP
Sbjct: 103 RLMDFTTSLTPRFKHLASEARRTSLRVLLQSFFP 2
Score = 117 bits (251), Expect = 8e-026
Identities = 54/116 (46%), Positives = 76/116 (65%)
Frame = +1 / -1
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC KILF*WNIY+ N+ F T
Sbjct: 353 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTCKILF*WNIYIWNVGFFTQ 174
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEGPLAELL 756
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG LAELL
Sbjct: 173 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEGSLAELL 6
Score = 101 bits (216), Expect = 6e-021
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = -2 / +2
Query: 757 KEALQADPQARATSLRGEVPQARSQRGSQEHSPREQRIVCDRWKYFSY*CDYTCSDTM*G 578
+EALQ +PQAR+TS RG V +ARSQR + H ++RI+C W++ + *C++TC+ +*
Sbjct: 5 EEALQENPQARSTSFRG*VFEARSQRSGEVHQAGKERILCYCWEHLTN*CNHTCTYFV*R 184
Query: 577 S*CSLRICSIKRGSCDRRNH*EADLL 500
S S+ ICSIKRGSC R+H*EA++L
Sbjct: 185 SRHSIYICSIKRGSCRCRSH*EANML 262
>gb|CR393042.1|CR393042 CR393042 RN Pinus pinaster cDNA clone RN51H02, mRNA sequence
Length = 548
Score = 226 bits (487), Expect = 2e-058
Identities = 96/120 (80%), Positives = 101/120 (84%)
Frame = -3 / +2
Query: 738 TLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANVPYV 559
TLKLVRRASEAKCLKRGVKEVVKSIRRG KG CVIAGNISPIDVITHVPILCEEA++PY+
Sbjct: 2 TLKLVRRASEAKCLKRGVKEVVKSIRRGKKGFCVIAGNISPIDVITHVPILCEEADIPYI 181
Query: 558 YVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVKDKLKSDYDQVVTEVAEATSAMF* 379
YVPSKEDLA AG TKRPTCCVLVLT P KG LS E KLK DY +VV EV E + F*
Sbjct: 182 YVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEEDKKLKEDYSEVVKEVRELATPFF* 361
Score = 155 bits (332), Expect = 6e-037
Identities = 68/87 (78%), Positives = 71/87 (81%)
Frame = +2 / -3
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSF+GTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 261 GLVSTKTQHVGLLVAPAPARSSFEGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 82
Query: 659 RRMLLTTSLTPRLRHFASEARRTSLRV 739
R M TTSLTPR +H ASEARRTSLRV
Sbjct: 81 RLMDFTTSLTPRFKHLASEARRTSLRV 1
Score = 105 bits (225), Expect = 3e-022
Identities = 49/110 (44%), Positives = 71/110 (64%)
Frame = +1 / -2
Query: 409 FRYNLVIVRLQFILHLSTELPLVWFGQNQDATSRPLSGSCGRKILF*WNIYVRNISFLT* 588
F ++ +V QF + L T+ ++ + T PLSGSC RKILF* NIY+ N+ F T
Sbjct: 331 FLHHFTVVLFQFFIFLLTKATFSRTCKH*NTTCWPLSGSCTRKILF*RNIYIWNVGFFTQ 152
Query: 589 YRNMCNHINRRNISSDHTQSFVPAANALDYLFDSALEALRLGGSSHELEG 738
R MC++IN ++ S++T+SF+ + L + FDSAL+ L LG SS+ELEG
Sbjct: 151 NRYMCDYINW*DVPSNNTKSFLSPPDGLHHFFDSALQTLSLGSSSNELEG 2
>gb|CO363046.1|CO363046 RTK1_7_G06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_G06_A029 3', mRNA sequence
Length = 658
Score = 205 bits (442), Expect = 4e-052
Identities = 86/110 (78%), Positives = 91/110 (82%)
Frame = -3 / +2
Query: 708 AKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLAT 529
AKCLKRGVKEVVKSIRRG KG CVIAGNISPIDVITHVPILCEEA++PY+YVPSKEDLA
Sbjct: 2 AKCLKRGVKEVVKSIRRGKKGFCVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLAG 181
Query: 528 AGTTKRPTCCVLVLTKPNKGELSGEVKDKLKSDYDQVVTEVAEATSAMF* 379
AG TKRPTCCVLVLT P KG LS E KLK DY +VV EV E + F*
Sbjct: 182 AGATKRPTCCVLVLTSPTKGSLSEEEDKKLKEDYSEVVKEVRELATPFF* 331
Score = 136 bits (291), Expect = 3e-031
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 231 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 52
Query: 659 RRMLLTTSLTPRLRHFA 709
R M TTSLTPR +H A
Sbjct: 51 RLMDFTTSLTPRFKHLA 1
>gb|CO175778.1|CO175778 NDL1_57_A05.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_57_A05_A029 3', mRNA sequence
Length = 670
Score = 193 bits (415), Expect = 2e-048
Identities = 81/105 (77%), Positives = 86/105 (81%)
Frame = -3 / +3
Query: 693 RGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTK 514
RGVKEVVKSIRRG KG CVIAGNISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TK
Sbjct: 3 RGVKEVVKSIRRGKKGFCVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATK 182
Query: 513 RPTCCVLVLTKPNKGELSGEVKDKLKSDYDQVVTEVAEATSAMF* 379
RPTCCVLVLT P KG LS E KLK DY +VV EV E + F*
Sbjct: 183 RPTCCVLVLTSPTKGSLSEEEDKKLKEDYSEVVKEVRELATPFF* 317
Score = 129 bits (277), Expect = 2e-029
Identities = 57/72 (79%), Positives = 58/72 (80%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 217 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 38
Query: 659 RRMLLTTSLTPR 694
R M TTSLTPR
Sbjct: 37 RLMDFTTSLTPR 2
>gb|DR013966.1|DR013966 HEAT1_22_D04.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_22_D04_A029 5', mRNA sequence
Length = 831
Score = 157 bits (338), Expect(2) = 3e-048
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -3 / +1
Query: 642 CVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGEL 463
CVIAGNISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG L
Sbjct: 292 CVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSL 471
Query: 462 SGEVKDKLKSDYDQVVTEVAEATSA 388
S E KLK DY++VV EV E ++
Sbjct: 472 SEEEDKKLKEDYNEVVKEVRELATS 546
Score = 102 bits (217), Expect(2) = 6e-028
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHN 646
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT N
Sbjct: 455 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQN 288
Score = 57.4 bits (119), Expect(2) = 3e-048
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3 / +2
Query: 717 ASEAKCLKRGVKEVVKSIRRGNKG 646
ASEAKCLKRGVKEVVKSIRRGNKG
Sbjct: 83 ASEAKCLKRGVKEVVKSIRRGNKG 154
Score = 45.1 bits (92), Expect(2) = 6e-028
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +2 / -1
Query: 647 PLFPRRMLLTTSLTPRLRHFASEARRTSL 733
PLFPR M TTSLTPR +H ASEA L
Sbjct: 153 PLFPRLMDFTTSLTPRFKHLASEAENHEL 67
>gb|CF478135.1|CF478135 RTWW3_19_E06.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_19_E06_A022 3', mRNA sequence
Length = 640
Score = 175 bits (377), Expect = 3e-043
Identities = 73/97 (75%), Positives = 78/97 (80%)
Frame = -3 / +3
Query: 669 SIRRGNKGLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLV 490
SIRRG KG CVIAGNISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLV
Sbjct: 3 SIRRGKKGFCVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLV 182
Query: 489 LTKPNKGELSGEVKDKLKSDYDQVVTEVAEATSAMF* 379
LT P KG LS E KLK DY +VV EV E + F*
Sbjct: 183 LTSPTKGSLSEEEDKKLKEDYSEVVKEVRELATPFF* 293
Score = 115 bits (246), Expect = 4e-025
Identities = 50/63 (79%), Positives = 51/63 (80%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFP 658
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NP FP
Sbjct: 193 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFP 14
Query: 659 RRM 667
R M
Sbjct: 13 RLM 5
>gb|CO197709.1|CO197709 GEO1_8_A12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_8_A12_A029 5', mRNA sequence
Length = 425
Score = 170 bits (365), Expect = 2e-041
Identities = 71/86 (82%), Positives = 77/86 (89%)
Frame = -3 / +2
Query: 807 EKKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAG 628
EK+ + L IA+PLA KKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRR KG CVIAG
Sbjct: 167 EKRKMLMLSPIARPLAWKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRREKKGFCVIAG 346
Query: 627 NISPIDVITHVPILCEEANVPYVYVP 550
NISPIDVITHVPILCEEA++PY+YVP
Sbjct: 347 NISPIDVITHVPILCEEADIPYIYVP 424
Score = 129 bits (277), Expect = 2e-029
Identities = 58/76 (76%), Positives = 60/76 (78%)
Frame = +2 / -3
Query: 551 GTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLFPRRMLLTTSLTPRLRHFASEARRTS 730
GTY G ASSH IGTCVITSIGE+FPAIT NP F R M TTSLTPR +H ASEARRTS
Sbjct: 423 GTYIYGMSASSHKIGTCVITSIGEMFPAITQNPFFSRLMDFTTSLTPRFKHLASEARRTS 244
Query: 731 LRVRLQSFFPARGFAM 778
LRV LQSFF ARG AM
Sbjct: 243 LRVLLQSFFHARGRAM 196
>gb|BQ196920.1|BQ196920 NXLV107_A12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV107_A12 5' similar to Arabidopsis thaliana
sequence At5g08180 nhp2-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 551
Score = 162 bits (348), Expect = 3e-039
Identities = 66/89 (74%), Positives = 73/89 (82%)
Frame = -3 / +3
Query: 654 NKGLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPN 475
NKG CVIAGNISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P
Sbjct: 21 NKGFCVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPT 200
Query: 474 KGELSGEVKDKLKSDYDQVVTEVAEATSA 388
KG S E KLK DY++VV EV E ++
Sbjct: 201 KGSPSEEEDKKLKEDYNEVVKEVRELATS 287
Score = 110 bits (234), Expect = 2e-023
Identities = 48/59 (81%), Positives = 49/59 (83%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHNPLF 655
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT NPLF
Sbjct: 196 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQNPLF 20
>gb|DR013882.1|DR013882 HEAT1_22_D04.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_22_D04_A029 3', mRNA sequence
Length = 714
Score = 157 bits (338), Expect = 8e-038
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -3 / +1
Query: 642 CVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGEL 463
CVIAGNISPIDVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG L
Sbjct: 118 CVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSL 297
Query: 462 SGEVKDKLKSDYDQVVTEVAEATSA 388
S E KLK DY++VV EV E ++
Sbjct: 298 SEEEDKKLKEDYNEVVKEVRELATS 372
Score = 102 bits (217), Expect = 4e-021
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +2 / -2
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITSIGEIFPAITHN 646
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITSIGE+FPAIT N
Sbjct: 281 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITSIGEMFPAITQN 114
>gb|CF670430.1|CF670430 RTCNT1_50_D12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_50_D12_A029 3', mRNA sequence
Length = 666
Score = 136 bits (292), Expect = 2e-031
Identities = 56/88 (63%), Positives = 65/88 (73%)
Frame = -3 / +2
Query: 651 KGLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNK 472
K ++ G DVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P K
Sbjct: 110 KDFVLLLGTSHQXDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTK 289
Query: 471 GELSGEVKDKLKSDYDQVVTEVAEATSA 388
G LS E KLK DY++VV EV E ++
Sbjct: 290 GSLSEEEDKKLKEDYNEVVKEVRELATS 373
Score = 111 bits (238), Expect(2) = 7e-032
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3 / +1
Query: 759 GKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGNISP 616
GKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKG CVIAGNISP
Sbjct: 1 GKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGFCVIAGNISP 144
Score = 89.5 bits (189), Expect(2) = 2e-035
Identities = 38/47 (80%), Positives = 40/47 (85%)
Frame = +2 / -2
Query: 617 GEIFPAITHNPLFPRRMLLTTSLTPRLRHFASEARRTSLRVRLQSFF 757
GE+FPAIT NPLFPR M TTSLTPR +H ASEARRTSLRV LQSFF
Sbjct: 143 GEMFPAITQNPLFPRLMDFTTSLTPRFKHLASEARRTSLRVLLQSFF 3
Score = 80.3 bits (169), Expect(2) = 2e-035
Identities = 36/45 (80%), Positives = 36/45 (80%)
Frame = +2 / -1
Query: 479 GLVRTKTQQVGLLVVPAVARSSFDGTYT*GTLASSHSIGTCVITS 613
GLV TKTQ VGLLV PA ARSSFDGTY G ASSH IGTCVITS
Sbjct: 282 GLVSTKTQHVGLLVAPAPARSSFDGTYIYGISASSHRIGTCVITS 148
Score = 46.0 bits (94), Expect(2) = 7e-032
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -2 / +1
Query: 613 *CDYTCSDTM*GS*CSLRICSIKRGSCDRRNH*EADLL 500
*C +TC+ ++* S S+ ICS+KRGSC R++*EA++L
Sbjct: 148 *CYHTCTYSV*RSRYSIYICSVKRGSCGCRSY*EANML 261
>gb|BX250783.1|BX250783 BX250783 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP041C01, mRNA sequence
Length = 520
Score = 135 bits (290), Expect = 3e-031
Identities = 56/78 (71%), Positives = 61/78 (78%)
Frame = -3 / +3
Query: 612 DVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKGELSGEVKDKLKS 433
DVITHVPILCEEA++PY+YVPSKEDLA AG TKRPTCCVLVLT P KG LS E KLK
Sbjct: 3 DVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVLTSPTKGSLSEEEDKKLKE 182
Query: 432 DYDQVVTEVAEATSAMF* 379
DY +VV EV E + F*
Sbjct: 183 DYSEVVKEVRELATPFF* 236
>gb|BM157918.1|BM157918 NXLV_027_A10_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_027_A10 5' similar to Arabidopsis thaliana
sequence At5g08180 nhp2-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 502
Score = 129 bits (277), Expect = 2e-029
Identities = 57/76 (75%), Positives = 61/76 (80%)
Frame = -3 / +3
Query: 804 KKASVALMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGN 625
K+ + L IA+PLAGKKLCKR LKLVRRASEAKCLKRGVK KSIRRG VIAGN
Sbjct: 273 KRKMMMLSPIARPLAGKKLCKRALKLVRRASEAKCLKRGVKXXXKSIRRGXXXXXVIAGN 452
Query: 624 ISPIDVITHVPILCEE 577
ISPID ITHVPILCE+
Sbjct: 453 ISPIDXITHVPILCEK 500
Score = 104 bits (221), Expect = 1e-021
Identities = 46/66 (69%), Positives = 49/66 (74%)
Frame = +2 / -1
Query: 581 SHSIGTCVITSIGEIFPAITHNPLFPRRMLLTTSLTPRLRHFASEARRTSLRVRLQSFFP 760
SH IGTCVI SIGE+FPAIT L PR M LTPR +H ASEARRTSLR LQSFFP
Sbjct: 496 SHRIGTCVIXSIGEMFPAITXXXLXPRLMDFXXXLTPRFKHXASEARRTSLRALLQSFFP 317
Query: 761 ARGFAM 778
ARG A+
Sbjct: 316 ARGRAI 299
>gb|DR094156.1|DR094156 STRR1_12_F11.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_F11_A033 5', mRNA sequence
Length = 850
Score = 84.9 bits (179), Expect(2) = 5e-024
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = -3 / +2
Query: 648 GLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKG 469
G+ +IAG+ISP+DVI+H+P+LCE+ NVP+++V S+ +L A TKRPT V+++ K
Sbjct: 515 GVVIIAGDISPMDVISHLPVLCEDHNVPFIFVTSRAELGAAAKTKRPTSVVMIMEKAESK 694
Query: 468 ELSGEVKDK 442
+ + DK
Sbjct: 695 KSKDKSADK 721
Score = 46.4 bits (95), Expect(2) = 5e-024
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = -3 / +2
Query: 786 LMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRR 658
++ A P+A +K K+ K +R+A++ LKRGVKEVVK++R+
Sbjct: 350 VVPFALPVADEKGMKKVYKTIRKAAKNNTLKRGVKEVVKTLRK 478
>gb|DR094075.1|DR094075 STRR1_12_F11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_F11_A033 3', mRNA sequence
Length = 821
Score = 84.9 bits (179), Expect(2) = 5e-024
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = -3 / +3
Query: 648 GLCVIAGNISPIDVITHVPILCEEANVPYVYVPSKEDLATAGTTKRPTCCVLVLTKPNKG 469
G+ +IAG+ISP+DVI+H+P+LCE+ NVP+++V S+ +L A TKRPT V+++ K
Sbjct: 246 GVVIIAGDISPMDVISHLPVLCEDHNVPFIFVTSRAELGAAAKTKRPTSVVMIMEKAESK 425
Query: 468 ELSGEVKDK 442
+ + DK
Sbjct: 426 KSKDKSADK 452
Score = 46.4 bits (95), Expect(2) = 5e-024
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = -3 / +3
Query: 786 LMSIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRR 658
++ A P+A +K K+ K +R+A++ LKRGVKEVVK++R+
Sbjct: 81 VVPFALPVADEKGMKKVYKTIRKAAKNNTLKRGVKEVVKTLRK 209
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 460,857,628
Number of Sequences: 355925
Number of extensions: 6782555
Number of successful extensions: 72430
Number of sequences better than 1.0e-020: 40
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12940234800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)