TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCA17a05.yg.2.1
(548 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK111213.1| Oryza sativa (japonica cultivar-group) cDNA... 203 2e-050
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 171 3e-046
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 171 3e-046
emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC O... 171 3e-046
gb|AACV01025522.1| Oryza sativa (japonica cultivar-group) c... 171 3e-046
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 171 7e-041
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 171 7e-041
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 171 7e-041
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 158 1e-039
dbj|AP005250.3| Oryza sativa (japonica cultivar-group) geno... 158 1e-039
dbj|AP004591.3| Oryza sativa (japonica cultivar-group) geno... 158 1e-039
gb|AACV01017194.1| Oryza sativa (japonica cultivar-group) c... 158 1e-039
gb|CB669055.1|CB669055 OSJNEe01E07.f OSJNEe Oryza sativa (j... 165 4e-039
gb|CB681747.1|CB681747 OSJNEf08G03.r OSJNEf Oryza sativa (j... 161 6e-038
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 158 4e-037
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 158 4e-037
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 158 4e-037
dbj|AK120963.1| Oryza sativa (japonica cultivar-group) cDNA... 153 1e-035
gb|CF308544.1|CF308544 ABF--02-G13.g1 ABF3-overexpressing t... 151 6e-035
ref|XM_476980.1| Oryza sativa (japonica cultivar-group), mRNA 151 6e-035
gb|C27582.1|C27582 C27582 Rice callus cDNA Oryza sativa (ja... 128 3e-034
gb|CB650947.1|CB650947 OSJNEb15L03.r OSJNEb Oryza sativa (j... 148 6e-034
gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 ... 146 2e-033
gb|AACV01008116.1| Oryza sativa (japonica cultivar-group) c... 146 2e-033
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 146 2e-033
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 146 2e-033
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 146 2e-033
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 146 2e-033
gb|AACV01015343.1| Oryza sativa (japonica cultivar-group) c... 139 2e-031
dbj|AP003848.3| Oryza sativa (japonica cultivar-group) geno... 139 2e-031
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 139 2e-031
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 139 2e-031
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 139 2e-031
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 139 2e-031
gb|CA999061.1|CA999061 S234M_G10 Rice cold stress germinati... 108 3e-029
dbj|AK100100.1| Oryza sativa (japonica cultivar-group) cDNA... 89 2e-028
ref|XM_506213.1| PREDICTED Oryza sativa (japonica cultivar-... 89 2e-028
ref|XM_476977.1| Oryza sativa (japonica cultivar-group), mRNA 89 2e-028
ref|XM_506214.1| PREDICTED Oryza sativa (japonica cultivar-... 89 2e-028
dbj|AK064329.1| Oryza sativa (japonica cultivar-group) cDNA... 89 2e-028
gb|CV730758.1|CV730758 FLO--04-H15.b1 Rice flower lambda ph... 89 2e-028
dbj|AK101244.1| Oryza sativa (japonica cultivar-group) cDNA... 87 8e-028
ref|XM_469993.1| Oryza sativa (japonica cultivar-group), mRNA 87 1e-027
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 103 2e-026
gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 ... 103 2e-026
gb|AACV01007692.1| Oryza sativa (japonica cultivar-group) c... 103 2e-026
dbj|AP003743.4| Oryza sativa (japonica cultivar-group) geno... 89 3e-024
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 88 6e-023
gb|AACV01008115.1| Oryza sativa (japonica cultivar-group) c... 88 6e-023
gb|CB651517.1|CB651517 OSJNEb16I04.r OSJNEb Oryza sativa (j... 110 1e-022
>dbj|AK111213.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-A12, full
insert sequence
Length = 2495
Score = 203 bits (437), Expect = 2e-050
Identities = 76/89 (85%), Positives = 81/89 (91%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYF 367
VIS IARD+ SRH NHSLRLFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYF
Sbjct: 1801 VISIDIARDIVSRHANHSLRLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYF 1980
Query: 366 TAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
TAHYQSP QMLCLW KLS+GRAHCCNYR*
Sbjct: 1981 TAHYQSPWQMLCLWNKLSSGRAHCCNYR* 2067
Score = 148 bits (317), Expect = 6e-034
Identities = 67/89 (75%), Positives = 70/89 (78%)
Frame = +2 / -1
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 2066 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 1887
Query: 461 MLTSSILNSRREWFVCRDATSLAMPAEIT 547
MLTSSILN+ RE F RD SLAM EIT
Sbjct: 1886 MLTSSILNNLRE*FAWRDTMSLAMSIEIT 1800
>gb|CH401282.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000119 genomic
scaffold, whole genome shotgun sequence
Length = 4546750
Score = 171 bits (367), Expect(2) = 3e-046
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3 / +1
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
+L+LFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KL
Sbjct: 3074308 ALQLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKL 3074487
Query: 315 SAGRAHCCNYR* 280
S+GRAHCCNYR*
Sbjct: 3074488 SSGRAHCCNYR* 3074523
Score = 126 bits (270), Expect(2) = 3e-029
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +2 / -3
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 3074522 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 3074343
Query: 461 MLTSSILNS 487
MLTSSILN+
Sbjct: 3074342 MLTSSILNN 3074316
Score = 38.2 bits (77), Expect(2) = 3e-046
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IARD+ SRH NHSLR+
Sbjct: 3074169 VISIDIARDIVSRHANHSLRV 3074231
Score = 25.4 bits (49), Expect(2) = 3e-029
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2 / -1
Query: 491 REWFVCRDATSLAMPAEIT 547
RE F RD SLAM EIT
Sbjct: 3074224 RE*FAWRDTMSLAMSIEIT 3074168
>ref|NT_107152.1| Oryza sativa (japonica cultivar-group)
Length = 2853905
Score = 171 bits (367), Expect(2) = 3e-046
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3 / +1
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
+L+LFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KL
Sbjct: 2225119 ALQLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKL 2225298
Query: 315 SAGRAHCCNYR* 280
S+GRAHCCNYR*
Sbjct: 2225299 SSGRAHCCNYR* 2225334
Score = 126 bits (270), Expect(2) = 3e-029
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +2 / -1
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 2225333 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 2225154
Query: 461 MLTSSILNS 487
MLTSSILN+
Sbjct: 2225153 MLTSSILNN 2225127
Score = 38.2 bits (77), Expect(2) = 3e-046
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IARD+ SRH NHSLR+
Sbjct: 2224980 VISIDIARDIVSRHANHSLRV 2225042
Score = 25.4 bits (49), Expect(2) = 3e-029
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2 / -2
Query: 491 REWFVCRDATSLAMPAEIT 547
RE F RD SLAM EIT
Sbjct: 2225035 RE*FAWRDTMSLAMSIEIT 2224979
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 161806
Score = 171 bits (367), Expect(2) = 3e-046
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3 / -1
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
+L+LFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KL
Sbjct: 58150 ALQLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKL 57971
Query: 315 SAGRAHCCNYR* 280
S+GRAHCCNYR*
Sbjct: 57970 SSGRAHCCNYR* 57935
Score = 126 bits (270), Expect(2) = 3e-029
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +2 / +3
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 57936 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 58115
Query: 461 MLTSSILNS 487
MLTSSILN+
Sbjct: 58116 MLTSSILNN 58142
Score = 38.2 bits (77), Expect(2) = 3e-046
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IARD+ SRH NHSLR+
Sbjct: 58289 VISIDIARDIVSRHANHSLRV 58227
Score = 25.4 bits (49), Expect(2) = 3e-029
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 491 REWFVCRDATSLAMPAEIT 547
RE F RD SLAM EIT
Sbjct: 58234 RE*FAWRDTMSLAMSIEIT 58290
>gb|AACV01025522.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025522, whole
genome shotgun sequence
Length = 26935
Score = 171 bits (367), Expect(2) = 3e-046
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3 / -2
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
+L+LFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KL
Sbjct: 20454 ALQLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKL 20275
Query: 315 SAGRAHCCNYR* 280
S+GRAHCCNYR*
Sbjct: 20274 SSGRAHCCNYR* 20239
Score = 126 bits (270), Expect(2) = 3e-029
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +2 / +2
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 20240 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 20419
Query: 461 MLTSSILNS 487
MLTSSILN+
Sbjct: 20420 MLTSSILNN 20446
Score = 38.2 bits (77), Expect(2) = 3e-046
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IARD+ SRH NHSLR+
Sbjct: 20593 VISIDIARDIVSRHANHSLRV 20531
Score = 25.4 bits (49), Expect(2) = 3e-029
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2 / +3
Query: 491 REWFVCRDATSLAMPAEIT 547
RE F RD SLAM EIT
Sbjct: 20538 RE*FAWRDTMSLAMSIEIT 20594
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 171 bits (367), Expect = 7e-041
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3 / +3
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
+L+LFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KL
Sbjct: 22257954 ALQLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKL 22258133
Query: 315 SAGRAHCCNYR* 280
S+GRAHCCNYR*
Sbjct: 22258134 SSGRAHCCNYR* 22258169
Score = 126 bits (270), Expect = 2e-027
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +2 / -3
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 22258168 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 22257989
Query: 461 MLTSSILNS 487
MLTSSILN+
Sbjct: 22257988 MLTSSILNN 22257962
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 171 bits (367), Expect = 7e-041
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3 / +3
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
+L+LFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KL
Sbjct: 26053521 ALQLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKL 26053700
Query: 315 SAGRAHCCNYR* 280
S+GRAHCCNYR*
Sbjct: 26053701 SSGRAHCCNYR* 26053736
Score = 126 bits (270), Expect = 2e-027
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +2 / -2
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 26053735 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 26053556
Query: 461 MLTSSILNS 487
MLTSSILN+
Sbjct: 26053555 MLTSSILNN 26053529
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 171 bits (367), Expect = 7e-041
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3 / +2
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
+L+LFKMEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KL
Sbjct: 25981697 ALQLFKMEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKL 25981876
Query: 315 SAGRAHCCNYR* 280
S+GRAHCCNYR*
Sbjct: 25981877 SSGRAHCCNYR* 25981912
Score = 126 bits (270), Expect = 2e-027
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +2 / -3
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 25981911 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 25981732
Query: 461 MLTSSILNS 487
MLTSSILN+
Sbjct: 25981731 MLTSSILNN 25981705
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065 genomic
scaffold, whole genome shotgun sequence
Length = 5026603
Score = 158 bits (340), Expect(2) = 1e-039
Identities = 54/75 (72%), Positives = 69/75 (92%)
Frame = -3 / +3
Query: 498 HSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEK 319
H+L+LFKMEDVSMG+WVE +N+++PV+Y HSW+FCQ+GC++NY+TAHYQSPRQMLCLW+K
Sbjct: 1715763 HALQLFKMEDVSMGLWVEKFNSTSPVKYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDK 1715942
Query: 318 LSAGRAHCCNYR*HE 274
L GRA CCNYR* +
Sbjct: 1715943 LVQGRASCCNYR*RD 1715987
Score = 115 bits (245), Expect = 5e-024
Identities = 52/72 (72%), Positives = 54/72 (75%)
Frame = +2 / -1
Query: 272 ASCYL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SST 451
+S YL*LQQ A P S SQRHSICLGDW*CAV * S QP WQN QLW Y TG + L ST
Sbjct: 1715989 SSRYL*LQQDARPWTSLSQRHSICLGDW*CAV**FSRQPYWQNFQLWEYLTGDVELNFST 1715810
Query: 452 HMPMLTSSILNS 487
H PMLTSSILNS
Sbjct: 1715809 HSPMLTSSILNS 1715774
Score = 28.1 bits (55), Expect(2) = 1e-039
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IA+ V S+H N SLR+
Sbjct: 1715633 VISGDIAKFVVSQHANQSLRV 1715695
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBb0009H02
Length = 155388
Score = 158 bits (340), Expect(2) = 1e-039
Identities = 54/75 (72%), Positives = 69/75 (92%)
Frame = -3 / +2
Query: 498 HSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEK 319
H+L+LFKMEDVSMG+WVE +N+++PV+Y HSW+FCQ+GC++NY+TAHYQSPRQMLCLW+K
Sbjct: 24422 HALQLFKMEDVSMGLWVEKFNSTSPVKYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDK 24601
Query: 318 LSAGRAHCCNYR*HE 274
L GRA CCNYR* +
Sbjct: 24602 LVQGRASCCNYR*RD 24646
Score = 115 bits (245), Expect = 5e-024
Identities = 52/72 (72%), Positives = 54/72 (75%)
Frame = +2 / -1
Query: 272 ASCYL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SST 451
+S YL*LQQ A P S SQRHSICLGDW*CAV * S QP WQN QLW Y TG + L ST
Sbjct: 24648 SSRYL*LQQDARPWTSLSQRHSICLGDW*CAV**FSRQPYWQNFQLWEYLTGDVELNFST 24469
Query: 452 HMPMLTSSILNS 487
H PMLTSSILNS
Sbjct: 24468 HSPMLTSSILNS 24433
Score = 28.1 bits (55), Expect(2) = 1e-039
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IA+ V S+H N SLR+
Sbjct: 24292 VISGDIAKFVVSQHANQSLRV 24354
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0582D05
Length = 150483
Score = 158 bits (340), Expect(2) = 1e-039
Identities = 54/75 (72%), Positives = 69/75 (92%)
Frame = -3 / +3
Query: 498 HSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEK 319
H+L+LFKMEDVSMG+WVE +N+++PV+Y HSW+FCQ+GC++NY+TAHYQSPRQMLCLW+K
Sbjct: 141561 HALQLFKMEDVSMGLWVEKFNSTSPVKYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDK 141740
Query: 318 LSAGRAHCCNYR*HE 274
L GRA CCNYR* +
Sbjct: 141741 LVQGRASCCNYR*RD 141785
Score = 115 bits (245), Expect = 5e-024
Identities = 52/72 (72%), Positives = 54/72 (75%)
Frame = +2 / -3
Query: 272 ASCYL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SST 451
+S YL*LQQ A P S SQRHSICLGDW*CAV * S QP WQN QLW Y TG + L ST
Sbjct: 141787 SSRYL*LQQDARPWTSLSQRHSICLGDW*CAV**FSRQPYWQNFQLWEYLTGDVELNFST 141608
Query: 452 HMPMLTSSILNS 487
H PMLTSSILNS
Sbjct: 141607 HSPMLTSSILNS 141572
Score = 28.1 bits (55), Expect(2) = 1e-039
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IA+ V S+H N SLR+
Sbjct: 141431 VISGDIAKFVVSQHANQSLRV 141493
>gb|AACV01017194.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017194, whole
genome shotgun sequence
Length = 26448
Score = 158 bits (340), Expect(2) = 1e-039
Identities = 54/75 (72%), Positives = 69/75 (92%)
Frame = -3 / +3
Query: 498 HSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEK 319
H+L+LFKMEDVSMG+WVE +N+++PV+Y HSW+FCQ+GC++NY+TAHYQSPRQMLCLW+K
Sbjct: 6768 HALQLFKMEDVSMGLWVEKFNSTSPVKYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDK 6947
Query: 318 LSAGRAHCCNYR*HE 274
L GRA CCNYR* +
Sbjct: 6948 LVQGRASCCNYR*RD 6992
Score = 115 bits (245), Expect = 5e-024
Identities = 52/72 (72%), Positives = 54/72 (75%)
Frame = +2 / -3
Query: 272 ASCYL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SST 451
+S YL*LQQ A P S SQRHSICLGDW*CAV * S QP WQN QLW Y TG + L ST
Sbjct: 6994 SSRYL*LQQDARPWTSLSQRHSICLGDW*CAV**FSRQPYWQNFQLWEYLTGDVELNFST 6815
Query: 452 HMPMLTSSILNS 487
H PMLTSSILNS
Sbjct: 6814 HSPMLTSSILNS 6779
Score = 28.1 bits (55), Expect(2) = 1e-039
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRL 484
VIS IA+ V S+H N SLR+
Sbjct: 6638 VISGDIAKFVVSQHANQSLRV 6700
>gb|CB669055.1|CB669055 OSJNEe01E07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E07 5', mRNA sequence
Length = 753
Score = 165 bits (354), Expect = 4e-039
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYF 367
VIS+ IA + S T H LRLFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+
Sbjct: 148 VISSDIAASIVSEFTAHKLRLFKMEDVSMGMWVERFNNTTHVQYVHSIKFCQFGCIDDYY 327
Query: 366 TAHYQSPRQMLCLWEKLSAGRAHCCNYR*HE 274
TAHYQSPRQMLCLW+KL +G+A CCN R* +
Sbjct: 328 TAHYQSPRQMLCLWDKLQSGKAQCCNMR*RQ 420
Score = 105 bits (224), Expect = 4e-021
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = +2 / -2
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
YL LQ CA P S S +HSICLGDW*CAV * S PNWQNL L TY T + L STHMP
Sbjct: 413 YLILQHCAFPDCSLSHKHSICLGDW*CAV**SSMHPNWQNLIL*TY*TCVVLLNRSTHMP 234
Query: 461 MLTSSILNSRREWFVCRDATSLAMPAEIT 547
MLTSSIL S V D A+ +IT
Sbjct: 233 MLTSSILKSLNL*AVNSDTMEAAISEDIT 147
>gb|CB681747.1|CB681747 OSJNEf08G03.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08G03 3', mRNA sequence
Length = 710
Score = 161 bits (346), Expect = 6e-038
Identities = 58/66 (87%), Positives = 62/66 (93%)
Frame = -3 / -2
Query: 477 MEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAH 298
MEDVSMGMWVED+N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLCLW KLS+GRAH
Sbjct: 709 MEDVSMGMWVEDFNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLCLWNKLSSGRAH 530
Query: 297 CCNYR* 280
CCNYR*
Sbjct: 529 CCNYR* 512
Score = 121 bits (259), Expect = 6e-026
Identities = 53/66 (80%), Positives = 55/66 (83%)
Frame = +2 / +3
Query: 281 YL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMP 460
+L*LQQCA P DS QRHSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L SSTHMP
Sbjct: 513 HL*LQQCARPDDSLFQRHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLKSSTHMP 692
Query: 461 MLTSSI 478
MLTSSI
Sbjct: 693 MLTSSI 710
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 158 bits (340), Expect = 4e-037
Identities = 54/75 (72%), Positives = 69/75 (92%)
Frame = -3 / +2
Query: 498 HSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEK 319
H+L+LFKMEDVSMG+WVE +N+++PV+Y HSW+FCQ+GC++NY+TAHYQSPRQMLCLW+K
Sbjct: 1509587 HALQLFKMEDVSMGLWVEKFNSTSPVKYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDK 1509766
Query: 318 LSAGRAHCCNYR*HE 274
L GRA CCNYR* +
Sbjct: 1509767 LVQGRASCCNYR*RD 1509811
Score = 115 bits (245), Expect = 5e-024
Identities = 52/72 (72%), Positives = 54/72 (75%)
Frame = +2 / -3
Query: 272 ASCYL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SST 451
+S YL*LQQ A P S SQRHSICLGDW*CAV * S QP WQN QLW Y TG + L ST
Sbjct: 1509813 SSRYL*LQQDARPWTSLSQRHSICLGDW*CAV**FSRQPYWQNFQLWEYLTGDVELNFST 1509634
Query: 452 HMPMLTSSILNS 487
H PMLTSSILNS
Sbjct: 1509633 HSPMLTSSILNS 1509598
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 158 bits (340), Expect = 4e-037
Identities = 54/75 (72%), Positives = 69/75 (92%)
Frame = -3 / +3
Query: 498 HSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEK 319
H+L+LFKMEDVSMG+WVE +N+++PV+Y HSW+FCQ+GC++NY+TAHYQSPRQMLCLW+K
Sbjct: 1715763 HALQLFKMEDVSMGLWVEKFNSTSPVKYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDK 1715942
Query: 318 LSAGRAHCCNYR*HE 274
L GRA CCNYR* +
Sbjct: 1715943 LVQGRASCCNYR*RD 1715987
Score = 115 bits (245), Expect = 5e-024
Identities = 52/72 (72%), Positives = 54/72 (75%)
Frame = +2 / -1
Query: 272 ASCYL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SST 451
+S YL*LQQ A P S SQRHSICLGDW*CAV * S QP WQN QLW Y TG + L ST
Sbjct: 1715989 SSRYL*LQQDARPWTSLSQRHSICLGDW*CAV**FSRQPYWQNFQLWEYLTGDVELNFST 1715810
Query: 452 HMPMLTSSILNS 487
H PMLTSSILNS
Sbjct: 1715809 HSPMLTSSILNS 1715774
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 158 bits (340), Expect = 4e-037
Identities = 54/75 (72%), Positives = 69/75 (92%)
Frame = -3 / +3
Query: 498 HSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEK 319
H+L+LFKMEDVSMG+WVE +N+++PV+Y HSW+FCQ+GC++NY+TAHYQSPRQMLCLW+K
Sbjct: 1742061 HALQLFKMEDVSMGLWVEKFNSTSPVKYSHSWKFCQYGCLENYYTAHYQSPRQMLCLWDK 1742240
Query: 318 LSAGRAHCCNYR*HE 274
L GRA CCNYR* +
Sbjct: 1742241 LVQGRASCCNYR*RD 1742285
Score = 115 bits (245), Expect = 5e-024
Identities = 52/72 (72%), Positives = 54/72 (75%)
Frame = +2 / -3
Query: 272 ASCYL*LQQCALPADSFSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SST 451
+S YL*LQQ A P S SQRHSICLGDW*CAV * S QP WQN QLW Y TG + L ST
Sbjct: 1742287 SSRYL*LQQDARPWTSLSQRHSICLGDW*CAV**FSRQPYWQNFQLWEYLTGDVELNFST 1742108
Query: 452 HMPMLTSSILNS 487
H PMLTSSILNS
Sbjct: 1742107 HSPMLTSSILNS 1742072
>dbj|AK120963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039P07, full
insert sequence
Length = 2736
Score = 153 bits (329), Expect = 1e-035
Identities = 58/89 (65%), Positives = 70/89 (78%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYF 367
VIS+ IA + S + LRLFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVDNY+
Sbjct: 1927 VISSDIAGAIVSEFRDQKLRLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDNYY 2106
Query: 366 TAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
TAHYQSPR MLCLW+KL G+ CCN R*
Sbjct: 2107 TAHYQSPRLMLCLWQKLLDGKPQCCNMR* 2193
>gb|CF308544.1|CF308544 ABF--02-G13.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-G13, mRNA sequence
Length = 507
Score = 151 bits (324), Expect = 6e-035
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = -3 / -2
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYF 367
VIS+ IA + S + LRLFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+
Sbjct: 344 VISSDIAGAIVSEFRDQKLRLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYY 165
Query: 366 TAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
TAHYQSPR MLCLW+KL G+ CCN R*
Sbjct: 164 TAHYQSPRLMLCLWQKLLDGKPQCCNMR* 78
>ref|XM_476980.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1992
Score = 151 bits (324), Expect = 6e-035
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYF 367
VIS+ IA + S + LRLFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+
Sbjct: 1726 VISSDIAGAIVSEFRDQKLRLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYY 1905
Query: 366 TAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
TAHYQSPR MLCLW+KL G+ CCN R*
Sbjct: 1906 TAHYQSPRLMLCLWQKLLDGKPQCCNMR* 1992
>gb|C27582.1|C27582 C27582 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52276_1A, mRNA sequence
Length = 249
Score = 128 bits (275), Expect(2) = 3e-034
Identities = 49/57 (85%), Positives = 51/57 (89%)
Frame = -3 / +3
Query: 501 NHSLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLC 331
NHSLRLFKMEDVSMGM VE N +APVQY+HSWRFCQFGCV NYFTAHYQSP QMLC
Sbjct: 9 NHSLRLFKMEDVSMGMXVEXVNTTAPVQYIHSWRFCQFGCVHNYFTAHYQSPWQMLC 179
Score = 101 bits (215), Expect(2) = 1e-021
Identities = 45/61 (73%), Positives = 47/61 (77%)
Frame = +2 / -3
Query: 320 FSQRHSICLGDW*CAVK*LSTQPNWQNLQLWTYCTGALAL*SSTHMPMLTSSILNSRREW 499
F HSIC GDW*CAVK*L TQPNWQNLQL Y TGA+ L ST MPMLTSSILN+ RE
Sbjct: 190 FVPEHSICQGDW*CAVK*LCTQPNWQNLQL*MY*TGAVVLTXSTXMPMLTSSILNNLRE* 11
Query: 500 F 502
F
Sbjct: 10 F 8
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / +2
Query: 330 LWEKLSAGRAHCCNYR* 280
LW KLS+GRAH CNYR*
Sbjct: 179 LWNKLSSGRAHFCNYR* 229
Score = 24.0 bits (46), Expect(2) = 1e-021
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 281 YL*LQQCALPADSFSQ 328
+L*LQ+CA P DS Q
Sbjct: 228 HL*LQKCARPDDSLFQ 181
>gb|CB650947.1|CB650947 OSJNEb15L03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15L03 3', mRNA sequence
Length = 803
Score = 148 bits (317), Expect = 6e-034
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = -3 / -3
Query: 492 LRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLS 313
LRLFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL
Sbjct: 798 LRLFKMEDVSMGMWVERFNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQ 619
Query: 312 AGRAHCCNYR*HE 274
+G+A CCN R* +
Sbjct: 618 SGKAQCCNMR*RQ 580
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence,
complete sequence
Length = 144487
Score = 146 bits (313), Expect = 2e-033
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = -3 / +1
Query: 492 LRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLS 313
L+LFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL
Sbjct: 1219 LQLFKMEDVSMGMWVERFNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQ 1398
Query: 312 AGRAHCCNYR*HE 274
+G+A CCN R* +
Sbjct: 1399 SGKAQCCNMR*RQ 1437
Score = 87.7 bits (185), Expect(2) = 6e-023
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -3 / +3
Query: 426 PVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*H 277
PV+Y H +F Q GC D Y+TAHYQSP+QM+CLW KL G A CCN R*+
Sbjct: 22476 PVKYSHDVKFFQSGCFDGYYTAHYQSPQQMICLWRKLQFGSAQCCNMR*Y 22625
Score = 43.2 bits (88), Expect(2) = 6e-023
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -3 / +3
Query: 492 LRLFKMEDVSMGMWVEDYNAS 430
++LFKMEDVSMGMWVE +N++
Sbjct: 22407 MQLFKMEDVSMGMWVEKFNST 22469
>gb|AACV01008116.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008116, whole
genome shotgun sequence
Length = 6612
Score = 146 bits (313), Expect = 2e-033
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = -3 / -3
Query: 492 LRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLS 313
L+LFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL
Sbjct: 1663 LQLFKMEDVSMGMWVERFNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQ 1484
Query: 312 AGRAHCCNYR*HE 274
+G+A CCN R* +
Sbjct: 1483 SGKAQCCNMR*RQ 1445
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 146 bits (313), Expect = 2e-033
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = -3 / -1
Query: 492 LRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLS 313
L+LFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL
Sbjct: 6965913 LQLFKMEDVSMGMWVERFNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQ 6965734
Query: 312 AGRAHCCNYR*HE 274
+G+A CCN R* +
Sbjct: 6965733 SGKAQCCNMR*RQ 6965695
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -3 / -3
Query: 423 VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*HEA 271
V Y+HS RFCQFGCVD+Y TAHYQSP QM CLW+KL+ GR CCN R*H A
Sbjct: 1174021 VDYIHSLRFCQFGCVDDYLTAHYQSPGQMACLWDKLAQGRPQCCNPR*HRA 1173869
Score = 87.7 bits (185), Expect(2) = 6e-023
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -3 / -3
Query: 426 PVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*H 277
PV+Y H +F Q GC D Y+TAHYQSP+QM+CLW KL G A CCN R*+
Sbjct: 6943942 PVKYSHDVKFFQSGCFDGYYTAHYQSPQQMICLWRKLQFGSAQCCNMR*Y 6943793
Score = 43.2 bits (88), Expect(2) = 6e-023
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -3 / -3
Query: 492 LRLFKMEDVSMGMWVEDYNAS 430
++LFKMEDVSMGMWVE +N++
Sbjct: 6944011 MQLFKMEDVSMGMWVEKFNST 6943949
Score = 39.6 bits (80), Expect(2) = 2e-026
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 485 CSRWRT*AWACGWRTTT 435
CSRWR *AWACGW +++
Sbjct: 1174086 CSRWRM*AWACGWGSSS 1174036
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 146 bits (313), Expect = 2e-033
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = -3 / -2
Query: 492 LRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLS 313
L+LFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL
Sbjct: 34232076 LQLFKMEDVSMGMWVERFNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQ 34231897
Query: 312 AGRAHCCNYR*HE 274
+G+A CCN R* +
Sbjct: 34231896 SGKAQCCNMR*RQ 34231858
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 146 bits (313), Expect = 2e-033
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = -3 / -2
Query: 492 LRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLS 313
L+LFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL
Sbjct: 33333846 LQLFKMEDVSMGMWVERFNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQ 33333667
Query: 312 AGRAHCCNYR*HE 274
+G+A CCN R* +
Sbjct: 33333666 SGKAQCCNMR*RQ 33333628
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 146 bits (313), Expect = 2e-033
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = -3 / -3
Query: 492 LRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLS 313
L+LFKMEDVSMGMWVE +N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL
Sbjct: 33243336 LQLFKMEDVSMGMWVERFNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQ 33243157
Query: 312 AGRAHCCNYR*HE 274
+G+A CCN R* +
Sbjct: 33243156 SGKAQCCNMR*RQ 33243118
>gb|AACV01015343.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015343, whole
genome shotgun sequence
Length = 76647
Score = 139 bits (299), Expect = 2e-031
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3 / +3
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
S++LFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+TAHYQSPR MLCLW+KL
Sbjct: 16350 SVQLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYYTAHYQSPRLMLCLWQKL 16529
Query: 315 SAGRAHCCNYR* 280
G+ CCN R*
Sbjct: 16530 LDGKPQCCNMR* 16565
Score = 88.6 bits (187), Expect(3) = 3e-024
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / +2
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 39251 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 39409
Score = 40.0 bits (81), Expect(3) = 3e-024
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -3 / +2
Query: 489 RLFKMEDVSMGMWVEDYN 436
+LFKMEDV+MGMWVE +N
Sbjct: 39197 QLFKMEDVNMGMWVEKFN 39250
Score = 24.4 bits (47), Expect(3) = 3e-024
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRL 484
VISA IAR + S N +LR+
Sbjct: 39059 VISADIARYIVSEFDNQTLRV 39121
>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1715_A07
Length = 130907
Score = 139 bits (299), Expect = 2e-031
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3 / -1
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
S++LFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+TAHYQSPR MLCLW+KL
Sbjct: 50990 SVQLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYYTAHYQSPRLMLCLWQKL 50811
Query: 315 SAGRAHCCNYR* 280
G+ CCN R*
Sbjct: 50810 LDGKPQCCNMR* 50775
Score = 88.6 bits (187), Expect(3) = 3e-024
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / -2
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 28090 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 27932
Score = 40.0 bits (81), Expect(3) = 3e-024
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -3 / -2
Query: 489 RLFKMEDVSMGMWVEDYN 436
+LFKMEDV+MGMWVE +N
Sbjct: 28144 QLFKMEDVNMGMWVEKFN 28091
Score = 24.4 bits (47), Expect(3) = 3e-024
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 546 VISAGIARDVASRHTNHSLRL 484
VISA IAR + S N +LR+
Sbjct: 28282 VISADIARYIVSEFDNQTLRV 28220
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 139 bits (299), Expect = 2e-031
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3 / -3
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
S++LFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+TAHYQSPR MLCLW+KL
Sbjct: 5140348 SVQLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYYTAHYQSPRLMLCLWQKL 5140169
Query: 315 SAGRAHCCNYR* 280
G+ CCN R*
Sbjct: 5140168 LDGKPQCCNMR* 5140133
Score = 88.6 bits (187), Expect(2) = 3e-022
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / -1
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 5117448 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 5117290
Score = 40.0 bits (81), Expect(2) = 3e-022
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -3 / -1
Query: 489 RLFKMEDVSMGMWVEDYN 436
+LFKMEDV+MGMWVE +N
Sbjct: 5117502 QLFKMEDVNMGMWVEKFN 5117449
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057 genomic
scaffold, whole genome shotgun sequence
Length = 3236776
Score = 139 bits (299), Expect = 2e-031
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3 / -2
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
S++LFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+TAHYQSPR MLCLW+KL
Sbjct: 2252514 SVQLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYYTAHYQSPRLMLCLWQKL 2252335
Query: 315 SAGRAHCCNYR* 280
G+ CCN R*
Sbjct: 2252334 LDGKPQCCNMR* 2252299
Score = 88.6 bits (187), Expect(3) = 2e-024
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / -1
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 2229613 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 2229455
Score = 40.0 bits (81), Expect(3) = 2e-024
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -3 / -1
Query: 489 RLFKMEDVSMGMWVEDYN 436
+LFKMEDV+MGMWVE +N
Sbjct: 2229667 QLFKMEDVNMGMWVEKFN 2229614
Score = 24.4 bits (47), Expect(3) = 2e-024
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 546 VISAGIARDVASRHTNHSLRL 484
VISA IAR + S N +LR+
Sbjct: 2229805 VISADIARYIVSEFDNQTLRV 2229743
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 139 bits (299), Expect = 2e-031
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3 / -2
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
S++LFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+TAHYQSPR MLCLW+KL
Sbjct: 5069263 SVQLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYYTAHYQSPRLMLCLWQKL 5069084
Query: 315 SAGRAHCCNYR* 280
G+ CCN R*
Sbjct: 5069083 LDGKPQCCNMR* 5069048
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 139 bits (299), Expect = 2e-031
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3 / -3
Query: 495 SLRLFKMEDVSMGMWVEDYNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKL 316
S++LFKMEDVSMG+WVE +N + PV++VHS +FCQFGCVD+Y+TAHYQSPR MLCLW+KL
Sbjct: 5184276 SVQLFKMEDVSMGLWVEQFNRTRPVEFVHSTKFCQFGCVDDYYTAHYQSPRLMLCLWQKL 5184097
Query: 315 SAGRAHCCNYR* 280
G+ CCN R*
Sbjct: 5184096 LDGKPQCCNMR* 5184061
>gb|CA999061.1|CA999061 S234M_G10 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 651
Score = 108 bits (230), Expect(2) = 3e-029
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = -3 / +2
Query: 423 VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*HE 274
VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL +G+A CCN R* +
Sbjct: 77 VQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQSGKAQCCNMR*RQ 226
Score = 44.1 bits (90), Expect(2) = 3e-029
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3 / +1
Query: 498 HSLRLFKMEDVSMGMWVEDY 439
H LRLFKMEDVSMGMW+E +
Sbjct: 1 HKLRLFKMEDVSMGMWLERF 60
>dbj|AK100100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004E20, full
insert sequence
Length = 2443
Score = 88.6 bits (187), Expect(2) = 2e-028
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / +2
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 1871 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 2029
Score = 60.6 bits (126), Expect(2) = 2e-028
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
VISA IAR + S N +LRLFKMEDV+MGMWVE +N
Sbjct: 1760 VISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1870
>ref|XM_506213.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_A07.12 mRNA
Length = 2443
Score = 88.6 bits (187), Expect(2) = 2e-028
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / +2
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 1871 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 2029
Score = 60.6 bits (126), Expect(2) = 2e-028
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
VISA IAR + S N +LRLFKMEDV+MGMWVE +N
Sbjct: 1760 VISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1870
>ref|XM_476977.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2439
Score = 88.6 bits (187), Expect(2) = 2e-028
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / +1
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 1867 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 2025
Score = 60.6 bits (126), Expect(2) = 2e-028
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
VISA IAR + S N +LRLFKMEDV+MGMWVE +N
Sbjct: 1756 VISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1866
>ref|XM_506214.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_A07.12 mRNA
Length = 1935
Score = 88.6 bits (187), Expect(2) = 2e-028
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / +2
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 1340 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 1498
Score = 60.6 bits (126), Expect(2) = 2e-028
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
VISA IAR + S N +LRLFKMEDV+MGMWVE +N
Sbjct: 1229 VISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1339
>dbj|AK064329.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F09, full
insert sequence
Length = 1932
Score = 88.6 bits (187), Expect(2) = 2e-028
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / +2
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 1337 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 1495
Score = 60.6 bits (126), Expect(2) = 2e-028
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +2
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
VISA IAR + S N +LRLFKMEDV+MGMWVE +N
Sbjct: 1226 VISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1336
>gb|CV730758.1|CV730758 FLO--04-H15.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-H15,
mRNA sequence
Length = 497
Score = 88.6 bits (187), Expect(2) = 2e-028
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / +1
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 283 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 441
Score = 60.6 bits (126), Expect(2) = 2e-028
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
VISA IAR + S N +LRLFKMEDV+MGMWVE +N
Sbjct: 172 VISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 282
>dbj|AK101244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032A07, full
insert sequence
Length = 2439
Score = 86.8 bits (183), Expect(2) = 8e-028
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -3 / +1
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV++ H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 1867 NTLRPVEFRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 2025
Score = 60.6 bits (126), Expect(2) = 8e-028
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYN 436
VISA IAR + S N +LRLFKMEDV+MGMWVE +N
Sbjct: 1756 VISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1866
>ref|XM_469993.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1956
Score = 86.8 bits (183), Expect(2) = 1e-027
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -3 / +1
Query: 426 PVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
PV+Y H +F Q GC D Y+TAHYQSP+QM+CLW KL G A CCN R*
Sbjct: 1810 PVKYSHDVKFFQSGCFDGYYTAHYQSPQQMICLWRKLQFGSAQCCNMR* 1956
Score = 59.7 bits (124), Expect(2) = 1e-027
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -3 / +1
Query: 546 VISAGIARDVASRHTNHSLRLFKMEDVSMGMWVEDYNAS 430
VIS+ IA+ + S N +LRLFKMEDVSMGMWVE +N++
Sbjct: 1687 VISSDIAQYIVSEFDNQTLRLFKMEDVSMGMWVEKFNST 1803
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -3 / -2
Query: 423 VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*HEA 271
V Y+HS RFCQFGCVD+Y TAHYQSP QM CLW+KL+ GR CCN R*H A
Sbjct: 725981 VDYIHSLRFCQFGCVDDYLTAHYQSPGQMACLWDKLAQGRPQCCNPR*HRA 725829
Score = 39.6 bits (80), Expect(2) = 2e-026
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / -3
Query: 485 CSRWRT*AWACGWRTTT 435
CSRWR *AWACGW +++
Sbjct: 726046 CSRWRM*AWACGWGSSS 725996
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
sequence
Length = 138345
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -3 / -3
Query: 423 VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*HEA 271
V Y+HS RFCQFGCVD+Y TAHYQSP QM CLW+KL+ GR CCN R*H A
Sbjct: 124468 VDYIHSLRFCQFGCVDDYLTAHYQSPGQMACLWDKLAQGRPQCCNPR*HRA 124316
Score = 39.6 bits (80), Expect(2) = 2e-026
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 485 CSRWRT*AWACGWRTTT 435
CSRWR *AWACGW +++
Sbjct: 124533 CSRWRM*AWACGWGSSS 124483
>gb|AACV01007692.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007692, whole
genome shotgun sequence
Length = 30512
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -3 / +1
Query: 423 VQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*HEA 271
V Y+HS RFCQFGCVD+Y TAHYQSP QM CLW+KL+ GR CCN R*H A
Sbjct: 25441 VDYIHSLRFCQFGCVDDYLTAHYQSPGQMACLWDKLAQGRPQCCNPR*HRA 25593
Score = 39.6 bits (80), Expect(2) = 2e-026
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / +2
Query: 485 CSRWRT*AWACGWRTTT 435
CSRWR *AWACGW +++
Sbjct: 25376 CSRWRM*AWACGWGSSS 25426
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1118_E12
Length = 119691
Score = 88.6 bits (187), Expect(3) = 3e-024
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -3 / -1
Query: 438 NASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR* 280
N PV+Y H RF Q GC D YFTAHYQSP+ M+CLW KL +G + CCN R*
Sbjct: 117543 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR* 117385
Score = 40.0 bits (81), Expect(3) = 3e-024
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -3 / -1
Query: 489 RLFKMEDVSMGMWVEDYN 436
+LFKMEDV+MGMWVE +N
Sbjct: 117597 QLFKMEDVNMGMWVEKFN 117544
Score = 24.4 bits (47), Expect(3) = 3e-024
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 546 VISAGIARDVASRHTNHSLRL 484
VISA IAR + S N +LR+
Sbjct: 117735 VISADIARYIVSEFDNQTLRV 117673
>ref|NT_107187.1| Oryza sativa (japonica cultivar-group)
Length = 2541880
Score = 87.7 bits (185), Expect(2) = 6e-023
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -3 / -3
Query: 426 PVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*H 277
PV+Y H +F Q GC D Y+TAHYQSP+QM+CLW KL G A CCN R*+
Sbjct: 2401463 PVKYSHDVKFFQSGCFDGYYTAHYQSPQQMICLWRKLQFGSAQCCNMR*Y 2401314
Score = 43.2 bits (88), Expect(2) = 6e-023
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -3 / -3
Query: 492 LRLFKMEDVSMGMWVEDYNAS 430
++LFKMEDVSMGMWVE +N++
Sbjct: 2401532 MQLFKMEDVSMGMWVEKFNST 2401470
>gb|AACV01008115.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008115, whole
genome shotgun sequence
Length = 32704
Score = 87.7 bits (185), Expect(2) = 6e-023
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -3 / -3
Query: 426 PVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*H 277
PV+Y H +F Q GC D Y+TAHYQSP+QM+CLW KL G A CCN R*+
Sbjct: 12446 PVKYSHDVKFFQSGCFDGYYTAHYQSPQQMICLWRKLQFGSAQCCNMR*Y 12297
Score = 43.2 bits (88), Expect(2) = 6e-023
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -3 / -3
Query: 492 LRLFKMEDVSMGMWVEDYNAS 430
++LFKMEDVSMGMWVE +N++
Sbjct: 12515 MQLFKMEDVSMGMWVEKFNST 12453
>gb|CB651517.1|CB651517 OSJNEb16I04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I04 3', mRNA sequence
Length = 692
Score = 110 bits (235), Expect = 1e-022
Identities = 38/56 (67%), Positives = 48/56 (85%)
Frame = -3 / -3
Query: 441 YNASAPVQYVHSWRFCQFGCVDNYFTAHYQSPRQMLCLWEKLSAGRAHCCNYR*HE 274
+N + VQYVHS +FCQFGC+D+Y+TAHYQSPRQMLCLW+KL +G+A CCN R* +
Sbjct: 687 FNNTRHVQYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQSGKAQCCNMR*RQ 520
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,126,975,277
Number of Sequences: 438736
Number of extensions: 72970188
Number of successful extensions: 447537
Number of sequences better than 1.0e-020: 68
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 112595300508
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)