TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCA13d08.yg.2.1
(511 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK058524.1| Oryza sativa (japonica cultivar-group) cDNA... 269 1e-070
dbj|AK102045.1| Oryza sativa (japonica cultivar-group) cDNA... 269 1e-070
dbj|AK101098.1| Oryza sativa (japonica cultivar-group) cDNA... 239 1e-061
dbj|AK065096.1| Oryza sativa (japonica cultivar-group) cDNA... 223 9e-057
gb|AACV01016558.1| Oryza sativa (japonica cultivar-group) c... 95 1e-048
dbj|AP005125.3| Oryza sativa (japonica cultivar-group) geno... 95 5e-046
>dbj|AK058524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-H11, full
insert sequence
Length = 1522
Score = 269 bits (582), Expect = 1e-070
Identities = 114/158 (72%), Positives = 128/158 (81%)
Frame = +1 / +2
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRNXXXXXXXXXXXXXXXXXDVATKGHGGLGVF 216
VLT+ YQPFAFGIT I+TY+EAK+NTR RN D+ TKG GGLG F
Sbjct: 323 VLTIAYQPFAFGITCILTYHEAKLNTRKRNLIGFALFLISSFALIMLDIGTKGRGGLGPF 502
Query: 217 VGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLTSALRLVTKAAFES 396
+GVCIISA+FGTADA+ QG LVGDLS MCPEFIQSF+AGLAASGVLTSALRL+TKAAFE+
Sbjct: 503 IGVCIISALFGTADASVQGGLVGDLSFMCPEFIQSFLAGLAASGVLTSALRLITKAAFEN 682
Query: 397 SKDGLRIGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
S++GLR GAILFFSITC FELVCLLLY +VF KLPIVK
Sbjct: 683 SQNGLRNGAILFFSITCFFELVCLLLYAYVFPKLPIVK 796
Score = 242 bits (523), Expect = 2e-062
Identities = 112/158 (70%), Positives = 118/158 (74%)
Frame = -3 / -2
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMRRPSFELSKAALVTNLKADVRTPDAASP 330
FTMG+L KT RHTSS +HVIEKNSIAP+RRP E S AA V NLKADVRTPDAA P
Sbjct: 795 FTMGNLGKTYA*RSRHTSSKKHVIEKNSIAPLRRPFCEFSNAAFVINLKADVRTPDAAKP 616
Query: 329 AMKD*MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATSRIINAKEPR 150
A KD*+NSGH+KERSPT P* LASAVPN ALIM TP PSPP PLV S IINAKE
Sbjct: 615 ARKD*INSGHMKERSPTKPP*TLASAVPNKALIMQTPINGPSPPLPLVPMSSIINAKELI 436
Query: 149 KKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
KK NP RFL LV FAS YV M+VIPKAKGW* V T
Sbjct: 435 KKSANPIRFLFLVLSFASWYVRMQVIPKAKGW*AIVRT 322
Score = 194 bits (419), Expect = 4e-048
Identities = 88/161 (54%), Positives = 105/161 (65%)
Frame = +3 / +1
Query: 27 SRPRTHTSLPAFCLWNNPHHDIL*SKDEHKIEKSCRIFPFLPRFFCIDNSGCCN*RTWWA 206
S ++ SLP FCL NN H DI *SK +HK E+S I FL FFCI+N+G *R W
Sbjct: 313 SNKSSYNSLPTFCLRNNLHPDIP*SKAQHKEEESNWICTFLN*FFCINNAGHWY*RKGWT 492
Query: 207 WCFRWCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHSVLHGGTSCIRGPNISFEISYQGS 386
W C+HN IWDS*C SRR GWRPF +VP V+SV CIR NIS EI+Y+ S
Sbjct: 493 WSIYRCLHNQCLIWDS*CQCSRRFGWRPFLHVPGVYSVFPCWLGCIRSSNISLEINYKSS 672
Query: 387 F*ELKRWSSHWSYTVLFNHMPVRAGVPPAIHIRLRQTTHRE 509
*EL +WSS WSYTVLF++M +RA VP + + L Q THRE
Sbjct: 673 I*ELTKWSS*WSYTVLFDNMLLRASVPTPLCVCLSQVTHRE 795
Score = 188 bits (405), Expect = 4e-046
Identities = 91/157 (57%), Positives = 108/157 (68%)
Frame = -2 / -1
Query: 510 LHDG*FAEDECV*QEAHQLEQACD*KEQYSSNAKTIF*ALKSCLGN*SQS*C*DP*CS*S 331
LHDG* +D + + AH LE+AC KEQYSS KTI * LK C N*SQ *C*+ *CS +
Sbjct: 796 LHDG*LGKDIRIKE*AH*LEEACYRKEQYSSITKTIL*VLKCCFCN*SQG*C*NS*CSQA 617
Query: 330 RHEGLNELWAH*RKVANQCALTISISCPKYGANYAYTNENTKPTMSFSCNIQNYQCKRTE 151
E LN+L AH KVANQ AL ISCPK G +YA T++ TK T SFS N+Q+Y CKRT
Sbjct: 616 SKERLNKLRAHEGKVANQTALNTGISCPK*GTDYADTDKWTKSTPSFSTNVQHY*CKRTN 437
Query: 150 EEKGKSCKISQSCVHLCFIICHDEGYSKGKRLVN*CE 40
EK KS I CV LCF++C D GYS+GKRLV+ C+
Sbjct: 436 *EKCKSN*IPLPCVELCFMVCQDAGYSEGKRLVSYCK 326
Score = 153 bits (328), Expect = 2e-035
Identities = 88/156 (56%), Positives = 99/156 (63%)
Frame = -1 / -3
Query: 508 SRWVVCRRRMCIAGGTPARTGM*LKRTV*LQCEDHLLSSQKLPW*LISKLMLGPLMQLVP 329
SRWV R GT AR M KRTV*L EDH +SSQ L *LIS+LML LMQ
Sbjct: 794 SRWVTWERHTHKGVGTLARRSMLSKRTV*LHYEDHFVSSQMLLL*LISRLMLELLMQPSQ 615
Query: 328 P*RTE*TLGTLKKGRQPVRLDN*HQLSQIWR*LCIHQRKHQAHHVL*LQHPELSMQKNRG 149
+TE*T GT +KGRQP RL++ HQLSQI *LC H+ Q H L* Q P L MQKN
Sbjct: 614 QGKTE*TPGT*RKGRQPNRLEHWHQLSQIRH*LCRHR*MDQVHPFL*YQCPALLMQKN*L 435
Query: 148 RKGKILQDFSILCSSLLHNMS**GLFQRQKAGKLV* 41
RK +I D S LC +LLH MS LF+RQK GKL+*
Sbjct: 434 RKVQIQLDSSSLC*ALLHGMSGCRLFRRQKVGKLL* 327
Score = 86.3 bits (182), Expect(2) = 7e-025
Identities = 51/90 (56%), Positives = 54/90 (60%)
Frame = +2 / +3
Query: 89 HIMKQR*TQD*EILQDFPFSSSVLLH**FWMLQLKDMVGLVFSLVYA*LAPYLGQLMLIV 268
H MKQ TQ I D FS VLLH** W L LK+ V LV V A* PYLGQLM +
Sbjct: 375 HTMKQSSTQGRGI*LDLHFS*LVLLH**CWTLVLKEGVDLVHLSVSA*SVPYLGQLMPVF 554
Query: 269 KAHWLATFL*CAQSSFSPSWRD*LHQGS*H 358
KA WLATF CA+S FS S LHQ *H
Sbjct: 555 KAVWLATFPSCARSLFSLSLLAWLHQEF*H 644
Score = 51.0 bits (105), Expect(2) = 7e-025
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 401 KMVFALELYCSFQSHACSSWCASCYTHSSSANYPS*S 511
KMVF +ELYCSF+ HA SS CA + S +YPS*S
Sbjct: 687 KMVFVMELYCSFR*HASSS*CAYSFMRMSFPSYPS*S 797
>dbj|AK102045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081M13, full
insert sequence
Length = 1682
Score = 269 bits (582), Expect = 1e-070
Identities = 114/158 (72%), Positives = 128/158 (81%)
Frame = +1 / +1
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRNXXXXXXXXXXXXXXXXXDVATKGHGGLGVF 216
VLT+ YQPFAFGIT I+TY+EAK+NTR RN D+ TKG GGLG F
Sbjct: 328 VLTIAYQPFAFGITCILTYHEAKLNTRKRNLIGFALFLISSFALIMLDIGTKGRGGLGPF 507
Query: 217 VGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLTSALRLVTKAAFES 396
+GVCIISA+FGTADA+ QG LVGDLS MCPEFIQSF+AGLAASGVLTSALRL+TKAAFE+
Sbjct: 508 IGVCIISALFGTADASVQGGLVGDLSFMCPEFIQSFLAGLAASGVLTSALRLITKAAFEN 687
Query: 397 SKDGLRIGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
S++GLR GAILFFSITC FELVCLLLY +VF KLPIVK
Sbjct: 688 SQNGLRNGAILFFSITCFFELVCLLLYAYVFPKLPIVK 801
Score = 242 bits (523), Expect = 2e-062
Identities = 112/158 (70%), Positives = 118/158 (74%)
Frame = -3 / -1
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMRRPSFELSKAALVTNLKADVRTPDAASP 330
FTMG+L KT RHTSS +HVIEKNSIAP+RRP E S AA V NLKADVRTPDAA P
Sbjct: 800 FTMGNLGKTYA*RSRHTSSKKHVIEKNSIAPLRRPFCEFSNAAFVINLKADVRTPDAAKP 621
Query: 329 AMKD*MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATSRIINAKEPR 150
A KD*+NSGH+KERSPT P* LASAVPN ALIM TP PSPP PLV S IINAKE
Sbjct: 620 ARKD*INSGHMKERSPTKPP*TLASAVPNKALIMQTPINGPSPPLPLVPMSSIINAKELI 441
Query: 149 KKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
KK NP RFL LV FAS YV M+VIPKAKGW* V T
Sbjct: 440 KKSANPIRFLFLVLSFASWYVRMQVIPKAKGW*AIVRT 327
Score = 194 bits (419), Expect = 4e-048
Identities = 88/161 (54%), Positives = 105/161 (65%)
Frame = +3 / +3
Query: 27 SRPRTHTSLPAFCLWNNPHHDIL*SKDEHKIEKSCRIFPFLPRFFCIDNSGCCN*RTWWA 206
S ++ SLP FCL NN H DI *SK +HK E+S I FL FFCI+N+G *R W
Sbjct: 318 SNKSSYNSLPTFCLRNNLHPDIP*SKAQHKEEESNWICTFLN*FFCINNAGHWY*RKGWT 497
Query: 207 WCFRWCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHSVLHGGTSCIRGPNISFEISYQGS 386
W C+HN IWDS*C SRR GWRPF +VP V+SV CIR NIS EI+Y+ S
Sbjct: 498 WSIYRCLHNQCLIWDS*CQCSRRFGWRPFLHVPGVYSVFPCWLGCIRSSNISLEINYKSS 677
Query: 387 F*ELKRWSSHWSYTVLFNHMPVRAGVPPAIHIRLRQTTHRE 509
*EL +WSS WSYTVLF++M +RA VP + + L Q THRE
Sbjct: 678 I*ELTKWSS*WSYTVLFDNMLLRASVPTPLCVCLSQVTHRE 800
Score = 188 bits (405), Expect = 4e-046
Identities = 91/157 (57%), Positives = 108/157 (68%)
Frame = -2 / -3
Query: 510 LHDG*FAEDECV*QEAHQLEQACD*KEQYSSNAKTIF*ALKSCLGN*SQS*C*DP*CS*S 331
LHDG* +D + + AH LE+AC KEQYSS KTI * LK C N*SQ *C*+ *CS +
Sbjct: 801 LHDG*LGKDIRIKE*AH*LEEACYRKEQYSSITKTIL*VLKCCFCN*SQG*C*NS*CSQA 622
Query: 330 RHEGLNELWAH*RKVANQCALTISISCPKYGANYAYTNENTKPTMSFSCNIQNYQCKRTE 151
E LN+L AH KVANQ AL ISCPK G +YA T++ TK T SFS N+Q+Y CKRT
Sbjct: 621 SKERLNKLRAHEGKVANQTALNTGISCPK*GTDYADTDKWTKSTPSFSTNVQHY*CKRTN 442
Query: 150 EEKGKSCKISQSCVHLCFIICHDEGYSKGKRLVN*CE 40
EK KS I CV LCF++C D GYS+GKRLV+ C+
Sbjct: 441 *EKCKSN*IPLPCVELCFMVCQDAGYSEGKRLVSYCK 331
Score = 153 bits (328), Expect = 2e-035
Identities = 88/156 (56%), Positives = 99/156 (63%)
Frame = -1 / -2
Query: 508 SRWVVCRRRMCIAGGTPARTGM*LKRTV*LQCEDHLLSSQKLPW*LISKLMLGPLMQLVP 329
SRWV R GT AR M KRTV*L EDH +SSQ L *LIS+LML LMQ
Sbjct: 799 SRWVTWERHTHKGVGTLARRSMLSKRTV*LHYEDHFVSSQMLLL*LISRLMLELLMQPSQ 620
Query: 328 P*RTE*TLGTLKKGRQPVRLDN*HQLSQIWR*LCIHQRKHQAHHVL*LQHPELSMQKNRG 149
+TE*T GT +KGRQP RL++ HQLSQI *LC H+ Q H L* Q P L MQKN
Sbjct: 619 QGKTE*TPGT*RKGRQPNRLEHWHQLSQIRH*LCRHR*MDQVHPFL*YQCPALLMQKN*L 440
Query: 148 RKGKILQDFSILCSSLLHNMS**GLFQRQKAGKLV* 41
RK +I D S LC +LLH MS LF+RQK GKL+*
Sbjct: 439 RKVQIQLDSSSLC*ALLHGMSGCRLFRRQKVGKLL* 332
Score = 86.3 bits (182), Expect(2) = 7e-025
Identities = 51/90 (56%), Positives = 54/90 (60%)
Frame = +2 / +2
Query: 89 HIMKQR*TQD*EILQDFPFSSSVLLH**FWMLQLKDMVGLVFSLVYA*LAPYLGQLMLIV 268
H MKQ TQ I D FS VLLH** W L LK+ V LV V A* PYLGQLM +
Sbjct: 380 HTMKQSSTQGRGI*LDLHFS*LVLLH**CWTLVLKEGVDLVHLSVSA*SVPYLGQLMPVF 559
Query: 269 KAHWLATFL*CAQSSFSPSWRD*LHQGS*H 358
KA WLATF CA+S FS S LHQ *H
Sbjct: 560 KAVWLATFPSCARSLFSLSLLAWLHQEF*H 649
Score = 51.0 bits (105), Expect(2) = 7e-025
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 401 KMVFALELYCSFQSHACSSWCASCYTHSSSANYPS*S 511
KMVF +ELYCSF+ HA SS CA + S +YPS*S
Sbjct: 692 KMVFVMELYCSFR*HASSS*CAYSFMRMSFPSYPS*S 802
>dbj|AK101098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P16, full
insert sequence
Length = 2496
Score = 239 bits (517), Expect = 1e-061
Identities = 101/158 (63%), Positives = 118/158 (74%)
Frame = +1 / +2
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRNXXXXXXXXXXXXXXXXXDVATKGHGGLGVF 216
V+TL YQPF T I TY+EAK+NTRLRN DVAT G GG+ F
Sbjct: 1172 VVTLTYQPFVLRTTAIFTYHEAKVNTRLRNLAGYTLFFLSSFAAIVLDVATSGRGGITPF 1351
Query: 217 VGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLTSALRLVTKAAFES 396
VGVCII+A FG AD + QG + GDLSLMCPEFIQSF AGLAASG++TSALRL+TKAAFE+
Sbjct: 1352 VGVCIIAAAFGVADGHVQGGMTGDLSLMCPEFIQSFFAGLAASGMITSALRLITKAAFEN 1531
Query: 397 SKDGLRIGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
S+DGLR GA+LF SI+C FEL+C+LLY F+F KLPIVK
Sbjct: 1532 SRDGLRKGAMLFSSISCFFELLCVLLYAFIFPKLPIVK 1645
Score = 189 bits (408), Expect = 1e-046
Identities = 89/158 (56%), Positives = 106/158 (67%)
Frame = -3 / -1
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMRRPSFELSKAALVTNLKADVRTPDAASP 330
FT+GS K YSR H+SS +H IE+N+IAP+RRPS E SKAA V +L A+V PDAASP
Sbjct: 1644 FTIGSFGKMKAYSRTHSSSKKHDIEENNIAPLRRPSLEFSKAAFVISLNAEVIIPDAASP 1465
Query: 329 AMKD*MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATSRIINAKEPR 150
A KD +NSGHI+ERSP P* SA P A +MHTPT PP P VATS+ I A E +
Sbjct: 1464 AKKDWINSGHIRERSPVIPP*T*PSATPKAAAMMHTPTNGVIPPLPEVATSKTIAANELK 1285
Query: 149 KKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
KK PA+ NLV FAS*YV M V+ + G * V+T
Sbjct: 1284 KKSV*PAKLRNLVLTFAS*YVNMAVVRRTNG**VRVTT 1171
>dbj|AK065096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M14, full
insert sequence
Length = 1557
Score = 223 bits (482), Expect = 9e-057
Identities = 91/158 (57%), Positives = 114/158 (72%)
Frame = +1 / +2
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRNXXXXXXXXXXXXXXXXXDVATKGHGGLGVF 216
++TLVYQPF T + Y+EAK+NTR+RN DVA+ G GG+ F
Sbjct: 341 MITLVYQPFVLTTTALFAYHEAKINTRMRNLARYMLFFLSSFGVIVLDVASSGRGGIAPF 520
Query: 217 VGVCIISAIFGTADANCQGALVGDLSLMCPEFIQSFMAGLAASGVLTSALRLVTKAAFES 396
VG+C+I+A FG AD + QG + GDLSLMCPEFIQSF AG+AASG +TSALR +TKA FE+
Sbjct: 521 VGLCLIAAAFGVADGHVQGGMTGDLSLMCPEFIQSFFAGIAASGAITSALRFLTKAIFEN 700
Query: 397 SKDGLRIGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
SKDGLR GA++F SI C FEL+C++LY FVF KLPI+K
Sbjct: 701 SKDGLRKGAMMFSSIACFFELLCVILYAFVFPKLPIMK 814
Score = 160 bits (345), Expect = 7e-038
Identities = 81/156 (51%), Positives = 90/156 (57%)
Frame = -3 / -1
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMRRPSFELSKAALVTNLKADVRTPDAASP 330
F +GS KT S H SS +H IE+N IAP+RRPS E SK A V NL A+V PDAA P
Sbjct: 813 FMIGSFGKTKA*SMTHRSSKKHAIEENIIAPLRRPSLEFSKIAFVKNLNAEVIAPDAAMP 634
Query: 329 AMKD*MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATSRIINAKEPR 150
A D MNSGHIK+RSP P* SA P A I H PT PP P ATSR I E R
Sbjct: 633 AKNDWMNSGHIKDRSPVIPP*TWPSATPKAAAIRHKPTNGAIPPLPEDATSRTITPNELR 454
Query: 149 KKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSV 42
K A+ LV IFAS*Y V+ + G *T V
Sbjct: 453 KNSIYLAKLRILVLIFAS*YANRAVVVRTNG**TRV 346
>gb|AACV01016558.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016558, whole
genome shotgun sequence
Length = 19815
Score = 95.5 bits (202), Expect(4) = 1e-048
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1 / -1
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQ 318
D+ TKG GGLG F+GVCIISA+FGTADA+ QG LVGDLS MCPEFIQ
Sbjct: 4875 DIGTKGRGGLGPFIGVCIISALFGTADASVQGGLVGDLSFMCPEFIQ 4735
Score = 83.5 bits (176), Expect(4) = 2e-045
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +1 / -1
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQ 318
DVAT G GG+ FVGVCII+A FG AD + QG + GDLSLMCPEFIQ
Sbjct: 10554 DVATSGRGGITPFVGVCIIAAAFGVADGHVQGGMTGDLSLMCPEFIQ 10414
Score = 80.3 bits (169), Expect(4) = 5e-042
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +1 / -1
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQ 318
DVA+ G GG+ FVG+C+I+A FG AD + QG + GDLSLMCPEFIQ
Sbjct: 17595 DVASSGRGGIAPFVGLCLIAAAFGVADGHVQGGMTGDLSLMCPEFIQ 17455
Score = 77.6 bits (163), Expect(4) = 1e-045
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -3 / +2
Query: 317 *MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATS 177
*+NSGH+KERSPT P* LASAVPN ALIM TP PSPP PLV S
Sbjct: 4736 *INSGHMKERSPTKPP*TLASAVPNKALIMQTPINGPSPPLPLVPMS 4876
Score = 71.2 bits (149), Expect(3) = 1e-035
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +1 / -3
Query: 316 QSFMAGLAASGVLTSALRLVTKAAFESSKDGLRIGAILFFSITCLFELVCLLLYTFVFGK 495
QSF+AGLAASGVLTSALRL+TKAAFE+S++GLR GA + ++ ++ VF K
Sbjct: 4630 QSFLAGLAASGVLTSALRLITKAAFENSQNGLRNGASKYLQRFFQSHILIFSAFSNVFHK 4451
Query: 496 L 498
L
Sbjct: 4450 L 4448
Score = 67.0 bits (140), Expect(4) = 1e-048
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1 / -2
Query: 415 IGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
+GA+LFFSITC FELVCLLLY +VF KLPIVK
Sbjct: 4400 LGAVLFFSITCFFELVCLLLYAYVFPKLPIVK 4305
Score = 66.6 bits (139), Expect(4) = 1e-045
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -3 / +2
Query: 173 IINAKEPRKKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
IINAKE KK NP RFL LV FAS YV M+VIPKAKGW* V T
Sbjct: 4958 IINAKELIKKSANPIRFLFLVLSFASWYVRMQVIPKAKGW*AIVRT 5095
Score = 66.1 bits (138), Expect(4) = 2e-045
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1 / -3
Query: 319 SFMAGLAASGVLTSALRLVTKAAFESSKDGLRIGA 423
SF AGLAASG++TSALRL+TKAAFE+S+DGLR GA
Sbjct: 10324 SFFAGLAASGMITSALRLITKAAFENSRDGLRKGA 10220
Score = 65.7 bits (137), Expect(4) = 5e-042
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +1 / -1
Query: 316 QSFMAGLAASGVLTSALRLVTKAAFESSKDGLRIGAILFFSI 441
QSF AG+AASG +TSALR +TKA FE+SKDGLR GA F +I
Sbjct: 17331 QSFFAGIAASGAITSALRFLTKAIFENSKDGLRKGASKFSNI 17206
Score = 63.4 bits (132), Expect(3) = 2e-028
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = -2 / +1
Query: 174 NYQCKRTEEEKGKSCKISQSCVHLCFIICHDEGYSKGKRLVN*CE 40
+Y CKRT EK KS I CV LCF++C D GYS+GKRLV+ C+
Sbjct: 4957 HY*CKRTN*EKCKSN*IPLPCVELCFMVCQDAGYSEGKRLVSYCK 5091
Score = 62.9 bits (131), Expect(3) = 1e-035
Identities = 25/43 (58%), Positives = 28/43 (65%)
Frame = +3 / -3
Query: 189 *RTWWAWCFRWCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHS 317
*R W W C+HN IWDS*C SRR GWRPF +VP V+S
Sbjct: 4864 *RKGWTWSIYRCLHNQCLIWDS*CQCSRRFGWRPFLHVPGVYS 4736
Score = 62.5 bits (130), Expect(3) = 2e-028
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2 / +1
Query: 318 LNELWAH*RKVANQCALTISISCPKYGANYAYTNENTKPTMSFSCNIQ 175
LN+L AH KVANQ AL ISCPK G +YA T++ TK T SFS N+Q
Sbjct: 4735 LNKLRAHEGKVANQTALNTGISCPK*GTDYADTDKWTKSTPSFSTNVQ 4878
Score = 62.5 bits (130), Expect(4) = 1e-045
Identities = 27/37 (72%), Positives = 29/37 (78%)
Frame = -3 / +3
Query: 425 IAPMRRPSFELSKAALVTNLKADVRTPDAASPAMKD* 315
+AP+RRP E S AA V NLKADVRTPDAA PA KD*
Sbjct: 4521 LAPLRRPFCEFSNAAFVINLKADVRTPDAAKPARKD* 4631
Score = 61.1 bits (127), Expect(4) = 4e-034
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -3 / +2
Query: 314 MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATS 177
+NSGHI+ERSP P* SA P A +MHTPT PP P VATS
Sbjct: 10418 INSGHIRERSPVIPP*T*PSATPKAAAMMHTPTNGVIPPLPEVATS 10555
Score = 60.2 bits (125), Expect(4) = 1e-048
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1 / -1
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRN 126
VLT+ YQPFAFGIT I+TY+EAK+NTR RN
Sbjct: 5094 VLTIAYQPFAFGITCILTYHEAKLNTRKRN 5005
Score = 59.3 bits (123), Expect(4) = 4e-034
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -3 / +3
Query: 425 IAPMRRPSFELSKAALVTNLKADVRTPDAASPAMKD*MNSGHIKE 291
+AP+RRPS E SKAA V +L A+V PDAASPA KD* ++ I E
Sbjct: 10218 LAPLRRPSLEFSKAAFVISLNAEVIIPDAASPAKKD*KSNK*ISE 10352
Score = 57.4 bits (119), Expect(3) = 1e-035
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +3 / -3
Query: 27 SRPRTHTSLPAFCLWNNPHHDIL*SKDEHKIEKSCRIFPFLPRFFCIDN 173
S ++ SLP FCL NN H DI *SK +HK E+S I FL FFCI+N
Sbjct: 5104 SNKSSYNSLPTFCLRNNLHPDIP*SKAQHKEEESNWICTFLN*FFCINN 4958
Score = 57.4 bits (119), Expect(4) = 2e-045
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1 / -3
Query: 415 IGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
I A+LF SI+C FEL+C+LLY F+F KLPIVK
Sbjct: 10150 IDAVLFSSISCFFELLCVLLYAFIFPKLPIVK 10055
Score = 52.8 bits (109), Expect(4) = 5e-042
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +1 / -1
Query: 421 AILFFSITCLFELVCLLLYTFVFGKLPIVK 510
A++F SI C FEL+C++LY FVF KLPI+K
Sbjct: 17085 AVMFSSIACFFELLCVILYAFVFPKLPIMK 16996
Score = 52.4 bits (108), Expect(3) = 2e-028
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -3 / +1
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMRRPSFELSKAAL 378
FTMG+L KT RHTSS +HVIEKNS AP + S + + L
Sbjct: 4306 FTMGNLGKTYA*RSRHTSSKKHVIEKNSTAPSNQTSIVMQEKTL 4437
Score = 50.6 bits (104), Expect(4) = 2e-045
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / -3
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRN 126
V+TL YQPF T I TY+EAK+NTRLRN
Sbjct: 10780 VVTLTYQPFVLRTTAIFTYHEAKVNTRLRN 10691
Score = 47.3 bits (97), Expect(4) = 5e-042
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / -2
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRN 126
++TLVYQPF T + Y+EAK+NTR+RN
Sbjct: 17819 MITLVYQPFVLTTTALFAYHEAKINTRMRN 17730
Score = 46.0 bits (94), Expect(4) = 1e-048
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3 / -2
Query: 339 CIRGPNISFEISYQGSF*ELKRWSSHWS 422
CIR NIS EI+Y+ S *EL +WSS WS
Sbjct: 4607 CIRSSNISLEINYKSSI*ELTKWSS*WS 4524
Score = 41.8 bits (85), Expect(4) = 4e-034
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3 / +3
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMR 411
FT+GS K YSR H+SS +H IE+N+ A ++
Sbjct: 10056 FTIGSFGKMKAYSRTHSSSKKHDIEENNTASIK 10154
Score = 41.4 bits (84), Expect(4) = 4e-034
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -3 / +3
Query: 170 INAKEPRKKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
I A E +KK PA+ NLV FAS*YV M V+ + G * V+T
Sbjct: 10647 IAANELKKKSV*PAKLRNLVLTFAS*YVNMAVVRRTNG**VRVTT 10781
Score = 36.3 bits (73), Expect(4) = 1e-045
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2 / +3
Query: 510 LHDG*FAEDECV*QEAHQLEQACD*KEQYSSNAKTI 403
LHDG* +D + + AH LE+AC KEQY + I
Sbjct: 4305 LHDG*LGKDIRIKE*AH*LEEACYRKEQYCTEQSNI 4412
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0058I18
Length = 151453
Score = 95.5 bits (202), Expect(4) = 5e-046
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1 / -1
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQ 318
D+ TKG GGLG F+GVCIISA+FGTADA+ QG LVGDLS MCPEFIQ
Sbjct: 132874 DIGTKGRGGLGPFIGVCIISALFGTADASVQGGLVGDLSFMCPEFIQ 132734
Score = 83.5 bits (176), Expect(4) = 8e-043
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +1 / -1
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQ 318
DVAT G GG+ FVGVCII+A FG AD + QG + GDLSLMCPEFIQ
Sbjct: 138553 DVATSGRGGITPFVGVCIIAAAFGVADGHVQGGMTGDLSLMCPEFIQ 138413
Score = 80.3 bits (169), Expect(4) = 2e-039
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +1 / -2
Query: 178 DVATKGHGGLGVFVGVCIISAIFGTADANCQGALVGDLSLMCPEFIQ 318
DVA+ G GG+ FVG+C+I+A FG AD + QG + GDLSLMCPEFIQ
Sbjct: 145593 DVASSGRGGIAPFVGLCLIAAAFGVADGHVQGGMTGDLSLMCPEFIQ 145453
Score = 77.6 bits (163), Expect(4) = 1e-045
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -3 / +3
Query: 317 *MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATS 177
*+NSGH+KERSPT P* LASAVPN ALIM TP PSPP PLV S
Sbjct: 132735 *INSGHMKERSPTKPP*TLASAVPNKALIMQTPINGPSPPLPLVPMS 132875
Score = 71.2 bits (149), Expect(3) = 1e-035
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +1 / -3
Query: 316 QSFMAGLAASGVLTSALRLVTKAAFESSKDGLRIGAILFFSITCLFELVCLLLYTFVFGK 495
QSF+AGLAASGVLTSALRL+TKAAFE+S++GLR GA + ++ ++ VF K
Sbjct: 132629 QSFLAGLAASGVLTSALRLITKAAFENSQNGLRNGASKYLQRFFQSHILIFSAFSNVFHK 132450
Query: 496 L 498
L
Sbjct: 132449 L 132447
Score = 67.0 bits (140), Expect(4) = 5e-046
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1 / -2
Query: 415 IGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
+GA+LFFSITC FELVCLLLY +VF KLPIVK
Sbjct: 132399 LGAVLFFSITCFFELVCLLLYAYVFPKLPIVK 132304
Score = 66.6 bits (139), Expect(4) = 1e-045
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = -3 / +3
Query: 173 IINAKEPRKKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
IINAKE KK NP RFL LV FAS YV M+VIPKAKGW* V T
Sbjct: 132957 IINAKELIKKSANPIRFLFLVLSFASWYVRMQVIPKAKGW*AIVRT 133094
Score = 66.1 bits (138), Expect(4) = 8e-043
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1 / -3
Query: 319 SFMAGLAASGVLTSALRLVTKAAFESSKDGLRIGA 423
SF AGLAASG++TSALRL+TKAAFE+S+DGLR GA
Sbjct: 138323 SFFAGLAASGMITSALRLITKAAFENSRDGLRKGA 138219
Score = 65.7 bits (137), Expect(4) = 2e-039
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +1 / -2
Query: 316 QSFMAGLAASGVLTSALRLVTKAAFESSKDGLRIGAILFFSI 441
QSF AG+AASG +TSALR +TKA FE+SKDGLR GA F +I
Sbjct: 145329 QSFFAGIAASGAITSALRFLTKAIFENSKDGLRKGASKFSNI 145204
Score = 63.4 bits (132), Expect(3) = 1e-027
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = -2 / +2
Query: 174 NYQCKRTEEEKGKSCKISQSCVHLCFIICHDEGYSKGKRLVN*CE 40
+Y CKRT EK KS I CV LCF++C D GYS+GKRLV+ C+
Sbjct: 132956 HY*CKRTN*EKCKSN*IPLPCVELCFMVCQDAGYSEGKRLVSYCK 133090
Score = 62.9 bits (131), Expect(3) = 1e-035
Identities = 25/43 (58%), Positives = 28/43 (65%)
Frame = +3 / -3
Query: 189 *RTWWAWCFRWCMHN*RHIWDS*C*LSRRTGWRPFFNVPRVHS 317
*R W W C+HN IWDS*C SRR GWRPF +VP V+S
Sbjct: 132863 *RKGWTWSIYRCLHNQCLIWDS*CQCSRRFGWRPFLHVPGVYS 132735
Score = 62.5 bits (130), Expect(3) = 1e-027
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2 / +2
Query: 318 LNELWAH*RKVANQCALTISISCPKYGANYAYTNENTKPTMSFSCNIQ 175
LN+L AH KVANQ AL ISCPK G +YA T++ TK T SFS N+Q
Sbjct: 132734 LNKLRAHEGKVANQTALNTGISCPK*GTDYADTDKWTKSTPSFSTNVQ 132877
Score = 62.5 bits (130), Expect(4) = 1e-045
Identities = 27/37 (72%), Positives = 29/37 (78%)
Frame = -3 / +1
Query: 425 IAPMRRPSFELSKAALVTNLKADVRTPDAASPAMKD* 315
+AP+RRP E S AA V NLKADVRTPDAA PA KD*
Sbjct: 132520 LAPLRRPFCEFSNAAFVINLKADVRTPDAAKPARKD* 132630
Score = 61.1 bits (127), Expect(4) = 4e-034
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 314 MNSGHIKERSPTSAP*QLASAVPNMALIMHTPTKTPSPPCPLVATS 177
+NSGHI+ERSP P* SA P A +MHTPT PP P VATS
Sbjct: 138417 INSGHIRERSPVIPP*T*PSATPKAAAMMHTPTNGVIPPLPEVATS 138554
Score = 60.2 bits (125), Expect(4) = 5e-046
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1 / -1
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRN 126
VLT+ YQPFAFGIT I+TY+EAK+NTR RN
Sbjct: 133093 VLTIAYQPFAFGITCILTYHEAKLNTRKRN 133004
Score = 59.3 bits (123), Expect(4) = 4e-034
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -3 / +1
Query: 425 IAPMRRPSFELSKAALVTNLKADVRTPDAASPAMKD*MNSGHIKE 291
+AP+RRPS E SKAA V +L A+V PDAASPA KD* ++ I E
Sbjct: 138217 LAPLRRPSLEFSKAAFVISLNAEVIIPDAASPAKKD*KSNK*ISE 138351
Score = 57.4 bits (119), Expect(3) = 1e-035
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +3 / -3
Query: 27 SRPRTHTSLPAFCLWNNPHHDIL*SKDEHKIEKSCRIFPFLPRFFCIDN 173
S ++ SLP FCL NN H DI *SK +HK E+S I FL FFCI+N
Sbjct: 133103 SNKSSYNSLPTFCLRNNLHPDIP*SKAQHKEEESNWICTFLN*FFCINN 132957
Score = 57.4 bits (119), Expect(4) = 8e-043
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1 / -3
Query: 415 IGAILFFSITCLFELVCLLLYTFVFGKLPIVK 510
I A+LF SI+C FEL+C+LLY F+F KLPIVK
Sbjct: 138149 IDAVLFSSISCFFELLCVLLYAFIFPKLPIVK 138054
Score = 52.8 bits (109), Expect(4) = 2e-039
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +1 / -2
Query: 421 AILFFSITCLFELVCLLLYTFVFGKLPIVK 510
A++F SI C FEL+C++LY FVF KLPI+K
Sbjct: 145083 AVMFSSIACFFELLCVILYAFVFPKLPIMK 144994
Score = 50.6 bits (104), Expect(4) = 8e-043
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / -3
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRN 126
V+TL YQPF T I TY+EAK+NTRLRN
Sbjct: 138779 VVTLTYQPFVLRTTAIFTYHEAKVNTRLRN 138690
Score = 47.3 bits (97), Expect(4) = 2e-039
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / -3
Query: 37 VLTLVYQPFAFGITLIMTYYEAKMNTRLRN 126
++TLVYQPF T + Y+EAK+NTR+RN
Sbjct: 145817 MITLVYQPFVLTTTALFAYHEAKINTRMRN 145728
Score = 46.0 bits (94), Expect(4) = 5e-046
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3 / -2
Query: 339 CIRGPNISFEISYQGSF*ELKRWSSHWS 422
CIR NIS EI+Y+ S *EL +WSS WS
Sbjct: 132606 CIRSSNISLEINYKSSI*ELTKWSS*WS 132523
Score = 41.8 bits (85), Expect(4) = 4e-034
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3 / +1
Query: 509 FTMGSLPKTNVYSRRHTSSNRHVIEKNSIAPMR 411
FT+GS K YSR H+SS +H IE+N+ A ++
Sbjct: 138055 FTIGSFGKMKAYSRTHSSSKKHDIEENNTASIK 138153
Score = 41.4 bits (84), Expect(4) = 4e-034
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -3 / +1
Query: 170 INAKEPRKKRENPARFLNLVFIFAS*YVMMRVIPKAKGW*TSVST 36
I A E +KK PA+ NLV FAS*YV M V+ + G * V+T
Sbjct: 138646 IAANELKKKSV*PAKLRNLVLTFAS*YVNMAVVRRTNG**VRVTT 138780
Score = 38.2 bits (77), Expect(3) = 1e-027
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 423 SSNAKTIF*ALKSCLGN*SQS*C*DP*CS*SRHEGL 316
SS KTI * LK C N*SQ *C*+ *CS + E L
Sbjct: 132522 SSITKTIL*VLKCCFCN*SQG*C*NS*CSQASKERL 132629
Score = 36.3 bits (73), Expect(4) = 1e-045
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2 / +1
Query: 510 LHDG*FAEDECV*QEAHQLEQACD*KEQYSSNAKTI 403
LHDG* +D + + AH LE+AC KEQY + I
Sbjct: 132304 LHDG*LGKDIRIKE*AH*LEEACYRKEQYCTEQSNI 132411
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,721,289,089
Number of Sequences: 438736
Number of extensions: 59229155
Number of successful extensions: 425364
Number of sequences better than 1.0e-020: 6
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 100790954487
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)