TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBN21e06.xg.2.1
(704 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA... 319 2e-085
dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA... 319 2e-085
gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeo... 319 2e-085
ref|NM_197030.1| Oryza sativa (japonica cultivar-group) put... 319 2e-085
dbj|AK059498.1| Oryza sativa (japonica cultivar-group) cDNA... 307 8e-082
dbj|AK102378.1| Oryza sativa (japonica cultivar-group) cDNA... 307 8e-082
gb|AY425991.1| Oryza sativa (japonica cultivar-group) homeo... 307 8e-082
ref|XM_468564.1| Oryza sativa (japonica cultivar-group), p... 307 8e-082
emb|AJ556802.1|OSA556802 Oryza sativa (japonica cultivar-gr... 265 3e-069
dbj|AK060584.1| Oryza sativa (japonica cultivar-group) cDNA... 252 3e-065
dbj|AK101425.1| Oryza sativa (japonica cultivar-group) cDNA... 252 3e-065
dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA... 252 3e-065
dbj|AK061741.1| Oryza sativa (japonica cultivar-group) cDNA... 204 6e-065
gb|CV152400.1|CV152400 LS11-S.SEQ Cold stressed rice cDNA l... 204 2e-057
dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA... 223 2e-056
dbj|AK058915.1| Oryza sativa (japonica cultivar-group) cDNA... 221 7e-056
gb|AACV01021807.1| Oryza sativa (japonica cultivar-group) c... 123 5e-053
ref|NM_188279.1| Oryza sativa (japonica cultivar-group), p... 159 5e-052
dbj|AK112091.1| Oryza sativa (japonica cultivar-group) cDNA... 159 5e-052
gb|AACV01005752.1| Oryza sativa (japonica cultivar-group) c... 112 1e-051
gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11... 123 3e-051
gb|AC105733.2| Oryza sativa (japonica cultivar-group) chrom... 112 2e-050
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 112 5e-048
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 123 4e-047
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 112 3e-046
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 123 4e-046
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 90 8e-045
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 90 8e-045
emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC O... 90 9e-045
emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Parti... 90 9e-045
gb|AACV01025516.1| Oryza sativa (japonica cultivar-group) c... 90 9e-045
gb|CB654750.1|CB654750 OSJNEc07I06.r OSJNEc Oryza sativa (j... 125 1e-041
gb|AY554037.1| Oryza sativa (japonica cultivar-group) clone... 152 3e-035
gb|CG206831.1|CG206831 TOS0452 TAMU Rice Japonica Nipponbar... 123 6e-035
gb|AACV01007440.1| Oryza sativa (japonica cultivar-group) c... 100 1e-034
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 100 2e-033
ref|NT_079918.2| Oryza sativa (japonica cultivar-group) 100 2e-033
gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic ... 100 3e-033
dbj|AP003197.4| Oryza sativa (japonica cultivar-group) geno... 83 5e-031
gb|AU181084.1|AU181084 AU181084 Rice green shoot Oryza sati... 104 8e-030
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-026
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 123 2e-026
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 123 2e-026
gb|AU173356.1|AU173356 AU173356 Rice root Oryza sativa (jap... 103 2e-025
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 83 2e-024
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 83 4e-024
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 112 5e-023
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 112 5e-023
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 112 5e-023
gb|AACV01000374.1| Oryza sativa (japonica cultivar-group) c... 83 2e-021
>dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098N12, full
insert sequence
Length = 3227
Score = 319 bits (692), Expect = 2e-085
Identities = 124/158 (78%), Positives = 142/158 (89%)
Frame = +3 / +2
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQK+ISG PEA TL RWICQSY++HLG +L+ +D AGE+LL M WD++DA+LCCSFKE
Sbjct: 2402 AGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKE 2581
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQGY YLP GVCL
Sbjct: 2582 KPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCL 2761
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 2762 SGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2875
Score = 244 bits (528), Expect = 6e-063
Identities = 112/157 (71%), Positives = 120/157 (76%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *PCSI+FG S A
Sbjct: 2871 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*PCSINFGISLYRA 2692
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
FLP SS ILS RS RAT+ VS+M +PI L KVNTGFSLKEQHK AS S +I S SPA
Sbjct: 2691 FLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFSLKEQHKIASS*SHSIFNSASPA 2512
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S L+ S PK *LWQIQR SV ASG+PEI FCPA
Sbjct: 2511 SSACLSNSTPKWNW*LWQIQRASVGASGKPEIIFCPA 2401
Score = 185 bits (399), Expect = 4e-045
Identities = 90/158 (56%), Positives = 111/158 (70%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + LFHQFR+L +*
Sbjct: 2875 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTLFHQFRDLVV* 2696
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFLER AQ+SV ++P H Q FP
Sbjct: 2695 GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLERTAQNSVFVIP*HFQ*CFP 2516
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN*LLPS 12
S+I + + PQ+ VALANP + FR A N LLPS
Sbjct: 2515 SIICLPK*LHPQMELVALANPTS*RWGFREA*NYLLPS 2402
Score = 166 bits (358), Expect = 2e-039
Identities = 80/147 (54%), Positives = 91/147 (61%)
Frame = +1 / +3
Query: 10 LLGRS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
+LGR *F A LK GFAKAT WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 2400 MLGRR*FQASLKPQR*LVGFAKATSSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 2579
Query: 190 KSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCA 369
KSLCLL TRW+ TC*K L SL KIS TR L V R Y R RN*WNR TC + CA
Sbjct: 2580 KSLCLLLPTRWD*TC*KHLSSLSKISHWTRYLMKPVGRPYTTRSRN*WNRVTCTCLVECA 2759
Query: 370 CLGWAAMSPTSKLLLGKFSVRTATCTA 450
C GW AM +SKL G+ S +T CTA
Sbjct: 2760 CPGWGAMFLSSKL*HGRCSEKTTMCTA 2840
Score = 143 bits (306), Expect(2) = 5e-042
Identities = 68/120 (56%), Positives = 78/120 (65%)
Frame = +2 / +1
Query: 125 WGITFDNVLGPSRRCLVLLFQGKACVYFRQPDGS*HVRNDFSRSARSHP*QDL*RAW*KG 304
WG T +N +G RR VL FQGKACVYF Q DG+ H RN RS RS QD+* + *+G
Sbjct: 2515 WGSTIENAMGLRRRYFVLFFQGKACVYFCQRDGTKHARNISRRSPRSLTGQDI**SR*EG 2694
Query: 305 TTCGGSETDGTGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
E DGTGL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 2695 PIQRDPEIDGTGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 2874
Score = 52.4 bits (108), Expect(2) = 5e-042
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVSLGGG 100
CWAE NF LP*S SLDLPKLPV GGG
Sbjct: 2401 CWAEDNFRLP*SPNASSLDLPKLPVPFGGG 2490
>dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109G06, full
insert sequence
Length = 3000
Score = 319 bits (692), Expect = 2e-085
Identities = 124/158 (78%), Positives = 142/158 (89%)
Frame = +3 / +3
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQK+ISG PEA TL RWICQSY++HLG +L+ +D AGE+LL M WD++DA+LCCSFKE
Sbjct: 2178 AGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKE 2357
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQGY YLP GVCL
Sbjct: 2358 KPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCL 2537
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 2538 SGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2651
Score = 244 bits (528), Expect = 6e-063
Identities = 112/157 (71%), Positives = 120/157 (76%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *PCSI+FG S A
Sbjct: 2647 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*PCSINFGISLYRA 2468
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
FLP SS ILS RS RAT+ VS+M +PI L KVNTGFSLKEQHK AS S +I S SPA
Sbjct: 2467 FLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFSLKEQHKIASS*SHSIFNSASPA 2288
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S L+ S PK *LWQIQR SV ASG+PEI FCPA
Sbjct: 2287 SSACLSNSTPKWNW*LWQIQRASVGASGKPEIIFCPA 2177
Score = 185 bits (399), Expect = 4e-045
Identities = 90/158 (56%), Positives = 111/158 (70%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + LFHQFR+L +*
Sbjct: 2651 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTLFHQFRDLVV* 2472
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFLER AQ+SV ++P H Q FP
Sbjct: 2471 GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLERTAQNSVFVIP*HFQ*CFP 2292
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN*LLPS 12
S+I + + PQ+ VALANP + FR A N LLPS
Sbjct: 2291 SIICLPK*LHPQMELVALANPTS*RWGFREA*NYLLPS 2178
Score = 166 bits (358), Expect = 2e-039
Identities = 80/147 (54%), Positives = 91/147 (61%)
Frame = +1 / +1
Query: 10 LLGRS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
+LGR *F A LK GFAKAT WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 2176 MLGRR*FQASLKPQR*LVGFAKATSSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 2355
Query: 190 KSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCA 369
KSLCLL TRW+ TC*K L SL KIS TR L V R Y R RN*WNR TC + CA
Sbjct: 2356 KSLCLLLPTRWD*TC*KHLSSLSKISHWTRYLMKPVGRPYTTRSRN*WNRVTCTCLVECA 2535
Query: 370 CLGWAAMSPTSKLLLGKFSVRTATCTA 450
C GW AM +SKL G+ S +T CTA
Sbjct: 2536 CPGWGAMFLSSKL*HGRCSEKTTMCTA 2616
Score = 143 bits (306), Expect(2) = 5e-042
Identities = 68/120 (56%), Positives = 78/120 (65%)
Frame = +2 / +2
Query: 125 WGITFDNVLGPSRRCLVLLFQGKACVYFRQPDGS*HVRNDFSRSARSHP*QDL*RAW*KG 304
WG T +N +G RR VL FQGKACVYF Q DG+ H RN RS RS QD+* + *+G
Sbjct: 2291 WGSTIENAMGLRRRYFVLFFQGKACVYFCQRDGTKHARNISRRSPRSLTGQDI**SR*EG 2470
Query: 305 TTCGGSETDGTGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
E DGTGL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 2471 PIQRDPEIDGTGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 2650
Score = 52.4 bits (108), Expect(2) = 5e-042
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2 / +2
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVSLGGG 100
CWAE NF LP*S SLDLPKLPV GGG
Sbjct: 2177 CWAEDNFRLP*SPNASSLDLPKLPVPFGGG 2266
>gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper
protein Hox9 mRNA, complete cds
Length = 3174
Score = 319 bits (692), Expect = 2e-085
Identities = 124/158 (78%), Positives = 142/158 (89%)
Frame = +3 / +3
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQK+ISG PEA TL RWICQSY++HLG +L+ +D AGE+LL M WD++DA+LCCSFKE
Sbjct: 2331 AGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKE 2510
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQGY YLP GVCL
Sbjct: 2511 KPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCL 2690
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 2691 SGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2804
Score = 244 bits (528), Expect = 6e-063
Identities = 112/157 (71%), Positives = 120/157 (76%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *PCSI+FG S A
Sbjct: 2800 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*PCSINFGISLYRA 2621
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
FLP SS ILS RS RAT+ VS+M +PI L KVNTGFSLKEQHK AS S +I S SPA
Sbjct: 2620 FLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFSLKEQHKIASS*SHSIFNSASPA 2441
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S L+ S PK *LWQIQR SV ASG+PEI FCPA
Sbjct: 2440 SSACLSNSTPKWNW*LWQIQRASVGASGKPEIIFCPA 2330
Score = 185 bits (399), Expect = 4e-045
Identities = 90/158 (56%), Positives = 111/158 (70%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + LFHQFR+L +*
Sbjct: 2804 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTLFHQFRDLVV* 2625
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFLER AQ+SV ++P H Q FP
Sbjct: 2624 GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLERTAQNSVFVIP*HFQ*CFP 2445
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN*LLPS 12
S+I + + PQ+ VALANP + FR A N LLPS
Sbjct: 2444 SIICLPK*LHPQMELVALANPTS*RWGFREA*NYLLPS 2331
Score = 166 bits (358), Expect = 2e-039
Identities = 80/147 (54%), Positives = 91/147 (61%)
Frame = +1 / +1
Query: 10 LLGRS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
+LGR *F A LK GFAKAT WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 2329 MLGRR*FQASLKPQR*LVGFAKATSSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 2508
Query: 190 KSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCA 369
KSLCLL TRW+ TC*K L SL KIS TR L V R Y R RN*WNR TC + CA
Sbjct: 2509 KSLCLLLPTRWD*TC*KHLSSLSKISHWTRYLMKPVGRPYTTRSRN*WNRVTCTCLVECA 2688
Query: 370 CLGWAAMSPTSKLLLGKFSVRTATCTA 450
C GW AM +SKL G+ S +T CTA
Sbjct: 2689 CPGWGAMFLSSKL*HGRCSEKTTMCTA 2769
Score = 143 bits (306), Expect(2) = 5e-042
Identities = 68/120 (56%), Positives = 78/120 (65%)
Frame = +2 / +2
Query: 125 WGITFDNVLGPSRRCLVLLFQGKACVYFRQPDGS*HVRNDFSRSARSHP*QDL*RAW*KG 304
WG T +N +G RR VL FQGKACVYF Q DG+ H RN RS RS QD+* + *+G
Sbjct: 2444 WGSTIENAMGLRRRYFVLFFQGKACVYFCQRDGTKHARNISRRSPRSLTGQDI**SR*EG 2623
Query: 305 TTCGGSETDGTGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
E DGTGL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 2624 PIQRDPEIDGTGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 2803
Score = 52.4 bits (108), Expect(2) = 5e-042
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2 / +2
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVSLGGG 100
CWAE NF LP*S SLDLPKLPV GGG
Sbjct: 2330 CWAEDNFRLP*SPNASSLDLPKLPVPFGGG 2419
>ref|NM_197030.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine
zipper protein (OSJNBa0093B11.11), mRNA
Length = 2523
Score = 319 bits (692), Expect = 2e-085
Identities = 124/158 (78%), Positives = 142/158 (89%)
Frame = +3 / +1
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQK+ISG PEA TL RWICQSY++HLG +L+ +D AGE+LL M WD++DA+LCCSFKE
Sbjct: 2050 AGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKE 2229
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQGY YLP GVCL
Sbjct: 2230 KPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCL 2409
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 2410 SGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 2523
Score = 244 bits (528), Expect = 6e-063
Identities = 112/157 (71%), Positives = 120/157 (76%)
Frame = -2 / -2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *PCSI+FG S A
Sbjct: 2519 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*PCSINFGISLYRA 2340
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
FLP SS ILS RS RAT+ VS+M +PI L KVNTGFSLKEQHK AS S +I S SPA
Sbjct: 2339 FLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFSLKEQHKIASS*SHSIFNSASPA 2160
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S L+ S PK *LWQIQR SV ASG+PEI FCPA
Sbjct: 2159 SSACLSNSTPKWNW*LWQIQRASVGASGKPEIIFCPA 2049
Score = 185 bits (399), Expect = 4e-045
Identities = 90/158 (56%), Positives = 111/158 (70%)
Frame = -1 / -1
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + LFHQFR+L +*
Sbjct: 2523 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTLFHQFRDLVV* 2344
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFLER AQ+SV ++P H Q FP
Sbjct: 2343 GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLERTAQNSVFVIP*HFQ*CFP 2164
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN*LLPS 12
S+I + + PQ+ VALANP + FR A N LLPS
Sbjct: 2163 SIICLPK*LHPQMELVALANPTS*RWGFREA*NYLLPS 2050
Score = 166 bits (358), Expect = 2e-039
Identities = 80/147 (54%), Positives = 91/147 (61%)
Frame = +1 / +2
Query: 10 LLGRS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
+LGR *F A LK GFAKAT WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 2048 MLGRR*FQASLKPQR*LVGFAKATSSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 2227
Query: 190 KSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCA 369
KSLCLL TRW+ TC*K L SL KIS TR L V R Y R RN*WNR TC + CA
Sbjct: 2228 KSLCLLLPTRWD*TC*KHLSSLSKISHWTRYLMKPVGRPYTTRSRN*WNRVTCTCLVECA 2407
Query: 370 CLGWAAMSPTSKLLLGKFSVRTATCTA 450
C GW AM +SKL G+ S +T CTA
Sbjct: 2408 CPGWGAMFLSSKL*HGRCSEKTTMCTA 2488
Score = 143 bits (306), Expect(2) = 5e-042
Identities = 68/120 (56%), Positives = 78/120 (65%)
Frame = +2 / +3
Query: 125 WGITFDNVLGPSRRCLVLLFQGKACVYFRQPDGS*HVRNDFSRSARSHP*QDL*RAW*KG 304
WG T +N +G RR VL FQGKACVYF Q DG+ H RN RS RS QD+* + *+G
Sbjct: 2163 WGSTIENAMGLRRRYFVLFFQGKACVYFCQRDGTKHARNISRRSPRSLTGQDI**SR*EG 2342
Query: 305 TTCGGSETDGTGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
E DGTGL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 2343 PIQRDPEIDGTGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 2522
Score = 52.4 bits (108), Expect(2) = 5e-042
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2 / +3
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVSLGGG 100
CWAE NF LP*S SLDLPKLPV GGG
Sbjct: 2049 CWAEDNFRLP*SPNASSLDLPKLPVPFGGG 2138
>dbj|AK059498.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H11, full
insert sequence
Length = 1573
Score = 307 bits (665), Expect = 8e-082
Identities = 118/158 (74%), Positives = 138/158 (87%)
Frame = +3 / +2
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQ++ISG PEAATL RW+CQSY YHLG +L+S SD E LL M W +QDA+LCCSFKE
Sbjct: 794 AGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKE 973
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQG+ YLP+GVC+
Sbjct: 974 KPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCM 1153
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 1154 SGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 1267
Score = 193 bits (417), Expect = 1e-047
Identities = 95/157 (60%), Positives = 109/157 (69%)
Frame = -2 / -2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR PCSI+ G +A
Sbjct: 1263 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR*TWPCSINLGMFENNA 1084
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFSL EQHK AS +I + S +
Sbjct: 1083 SFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFSLNEQHKIASW*CHSIFNNCSAS 904
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S+ L+ S P+ *LWQ R VAASG+PEI CPA
Sbjct: 903 PSD*LSNSTPRW*W*LWQTHRARVAASGKPEIILCPA 793
Score = 144 bits (309), Expect = 1e-032
Identities = 70/153 (45%), Positives = 100/153 (65%)
Frame = -1 / -1
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S +GPVDETEG+AV++A+L ++FPS+ L+ +M H AH QV +AL HQF N+
Sbjct: 1267 SHKGPVDETEGQAVNIAILGKHFPSHGLIERNMPTHS*HAHA*WQVDMALLHQFGNV*EQ 1088
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
C +RL++D V+ E+L D F*HV S V + KHR FLE AAQ+S+L++P H Q+ F
Sbjct: 1087 CFFSRLIKDPVQCEVL*GDKGSF*HVQSCFVGKCKHRFFLE*AAQNSILVMP*HLQQLFC 908
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN 27
I + + P ++ VALANP++K FR R+
Sbjct: 907 ISI*LTK*LYP*MVMVALANPSSKGCCFRETRD 809
Score = 106 bits (226), Expect = 3e-021
Identities = 60/144 (41%), Positives = 78/144 (54%)
Frame = +1 / +3
Query: 19 RS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSRKSL 198
R * L LK L GFA+AT G + ++++ N+ *+C G K L CAA SRK+
Sbjct: 801 RG*SLVSLKQQPLLDGFARATITI*G*SYLVNQMEMQNNC*RCYGITKMLFCAAHSRKNR 980
Query: 199 CLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCACLG 378
CL T+ + TC*K S + S T SL SL ++H + F N*W+RAM TC CAC
Sbjct: 981 CLHLPTKQDWTC*KLPLSPYRTSHWTGSLMSLEKKHCSQTFPN*WSRAMSTCHQACACQE 1160
Query: 379 WAAMSPTSKLLLGKFSVRTATCTA 450
W M + + LGK R A TA
Sbjct: 1161 WVGMFLSIRPWLGKCLPRIAMFTA 1232
>dbj|AK102378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091P14, full
insert sequence
Length = 3252
Score = 307 bits (665), Expect = 8e-082
Identities = 118/158 (74%), Positives = 138/158 (87%)
Frame = +3 / +3
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQ++ISG PEAATL RW+CQSY YHLG +L+S SD E LL M W +QDA+LCCSFKE
Sbjct: 2457 AGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKE 2636
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQG+ YLP+GVC+
Sbjct: 2637 KPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCM 2816
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 2817 SGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 2930
Score = 193 bits (417), Expect = 1e-047
Identities = 95/157 (60%), Positives = 109/157 (69%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR PCSI+ G +A
Sbjct: 2926 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR*TWPCSINLGMFENNA 2747
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFSL EQHK AS +I + S +
Sbjct: 2746 SFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFSLNEQHKIASW*CHSIFNNCSAS 2567
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S+ L+ S P+ *LWQ R VAASG+PEI CPA
Sbjct: 2566 PSD*LSNSTPRW*W*LWQTHRARVAASGKPEIILCPA 2456
Score = 144 bits (309), Expect = 1e-032
Identities = 70/153 (45%), Positives = 100/153 (65%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S +GPVDETEG+AV++A+L ++FPS+ L+ +M H AH QV +AL HQF N+
Sbjct: 2930 SHKGPVDETEGQAVNIAILGKHFPSHGLIERNMPTHS*HAHA*WQVDMALLHQFGNV*EQ 2751
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
C +RL++D V+ E+L D F*HV S V + KHR FLE AAQ+S+L++P H Q+ F
Sbjct: 2750 CFFSRLIKDPVQCEVL*GDKGSF*HVQSCFVGKCKHRFFLE*AAQNSILVMP*HLQQLFC 2571
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN 27
I + + P ++ VALANP++K FR R+
Sbjct: 2570 ISI*LTK*LYP*MVMVALANPSSKGCCFRETRD 2472
Score = 106 bits (226), Expect = 3e-021
Identities = 60/144 (41%), Positives = 78/144 (54%)
Frame = +1 / +1
Query: 19 RS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSRKSL 198
R * L LK L GFA+AT G + ++++ N+ *+C G K L CAA SRK+
Sbjct: 2464 RG*SLVSLKQQPLLDGFARATITI*G*SYLVNQMEMQNNC*RCYGITKMLFCAAHSRKNR 2643
Query: 199 CLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCACLG 378
CL T+ + TC*K S + S T SL SL ++H + F N*W+RAM TC CAC
Sbjct: 2644 CLHLPTKQDWTC*KLPLSPYRTSHWTGSLMSLEKKHCSQTFPN*WSRAMSTCHQACACQE 2823
Query: 379 WAAMSPTSKLLLGKFSVRTATCTA 450
W M + + LGK R A TA
Sbjct: 2824 WVGMFLSIRPWLGKCLPRIAMFTA 2895
>gb|AY425991.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper
protein Hox10 mRNA, complete cds
Length = 3252
Score = 307 bits (665), Expect = 8e-082
Identities = 118/158 (74%), Positives = 138/158 (87%)
Frame = +3 / +3
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQ++ISG PEAATL RW+CQSY YHLG +L+S SD E LL M W +QDA+LCCSFKE
Sbjct: 2457 AGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKE 2636
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQG+ YLP+GVC+
Sbjct: 2637 KPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCM 2816
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 2817 SGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 2930
Score = 193 bits (417), Expect = 1e-047
Identities = 95/157 (60%), Positives = 109/157 (69%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR PCSI+ G +A
Sbjct: 2926 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR*TWPCSINLGMFENNA 2747
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFSL EQHK AS +I + S +
Sbjct: 2746 SFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFSLNEQHKIASW*CHSIFNNCSAS 2567
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S+ L+ S P+ *LWQ R VAASG+PEI CPA
Sbjct: 2566 PSD*LSNSTPRW*W*LWQTHRARVAASGKPEIILCPA 2456
Score = 144 bits (309), Expect = 1e-032
Identities = 70/153 (45%), Positives = 100/153 (65%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S +GPVDETEG+AV++A+L ++FPS+ L+ +M H AH QV +AL HQF N+
Sbjct: 2930 SHKGPVDETEGQAVNIAILGKHFPSHGLIERNMPTHS*HAHA*WQVDMALLHQFGNV*EQ 2751
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
C +RL++D V+ E+L D F*HV S V + KHR FLE AAQ+S+L++P H Q+ F
Sbjct: 2750 CFFSRLIKDPVQCEVL*GDKGSF*HVQSCFVGKCKHRFFLE*AAQNSILVMP*HLQQLFC 2571
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN 27
I + + P ++ VALANP++K FR R+
Sbjct: 2570 ISI*LTK*LYP*MVMVALANPSSKGCCFRETRD 2472
Score = 106 bits (226), Expect = 3e-021
Identities = 60/144 (41%), Positives = 78/144 (54%)
Frame = +1 / +1
Query: 19 RS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSRKSL 198
R * L LK L GFA+AT G + ++++ N+ *+C G K L CAA SRK+
Sbjct: 2464 RG*SLVSLKQQPLLDGFARATITI*G*SYLVNQMEMQNNC*RCYGITKMLFCAAHSRKNR 2643
Query: 199 CLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCACLG 378
CL T+ + TC*K S + S T SL SL ++H + F N*W+RAM TC CAC
Sbjct: 2644 CLHLPTKQDWTC*KLPLSPYRTSHWTGSLMSLEKKHCSQTFPN*WSRAMSTCHQACACQE 2823
Query: 379 WAAMSPTSKLLLGKFSVRTATCTA 450
W M + + LGK R A TA
Sbjct: 2824 WVGMFLSIRPWLGKCLPRIAMFTA 2895
>ref|XM_468564.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2574
Score = 307 bits (665), Expect = 8e-082
Identities = 118/158 (74%), Positives = 138/158 (87%)
Frame = +3 / +1
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQ++ISG PEAATL RW+CQSY YHLG +L+S SD E LL M W +QDA+LCCSFKE
Sbjct: 2101 AGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKE 2280
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQG+ YLP+GVC+
Sbjct: 2281 KPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCM 2460
Query: 372 SGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 2461 SGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 2574
Score = 193 bits (417), Expect = 1e-047
Identities = 95/157 (60%), Positives = 109/157 (69%)
Frame = -2 / -2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR PCSI+ G +A
Sbjct: 2570 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR*TWPCSINLGMFENNA 2391
Query: 301 FLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA 122
PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFSL EQHK AS +I + S +
Sbjct: 2390 SFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFSLNEQHKIASW*CHSIFNNCSAS 2211
Query: 121 *SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S+ L+ S P+ *LWQ R VAASG+PEI CPA
Sbjct: 2210 PSD*LSNSTPRW*W*LWQTHRARVAASGKPEIILCPA 2100
Score = 144 bits (309), Expect = 1e-032
Identities = 70/153 (45%), Positives = 100/153 (65%)
Frame = -1 / -1
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
S +GPVDETEG+AV++A+L ++FPS+ L+ +M H AH QV +AL HQF N+
Sbjct: 2574 SHKGPVDETEGQAVNIAILGKHFPSHGLIERNMPTHS*HAHA*WQVDMALLHQFGNV*EQ 2395
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
C +RL++D V+ E+L D F*HV S V + KHR FLE AAQ+S+L++P H Q+ F
Sbjct: 2394 CFFSRLIKDPVQCEVL*GDKGSF*HVQSCFVGKCKHRFFLE*AAQNSILVMP*HLQQLFC 2215
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFRGARN 27
I + + P ++ VALANP++K FR R+
Sbjct: 2214 ISI*LTK*LYP*MVMVALANPSSKGCCFRETRD 2116
Score = 106 bits (226), Expect = 3e-021
Identities = 60/144 (41%), Positives = 78/144 (54%)
Frame = +1 / +2
Query: 19 RS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSRKSL 198
R * L LK L GFA+AT G + ++++ N+ *+C G K L CAA SRK+
Sbjct: 2108 RG*SLVSLKQQPLLDGFARATITI*G*SYLVNQMEMQNNC*RCYGITKMLFCAAHSRKNR 2287
Query: 199 CLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCACLG 378
CL T+ + TC*K S + S T SL SL ++H + F N*W+RAM TC CAC
Sbjct: 2288 CLHLPTKQDWTC*KLPLSPYRTSHWTGSLMSLEKKHCSQTFPN*WSRAMSTCHQACACQE 2467
Query: 379 WAAMSPTSKLLLGKFSVRTATCTA 450
W M + + LGK R A TA
Sbjct: 2468 WVGMFLSIRPWLGKCLPRIAMFTA 2539
>emb|AJ556802.1|OSA556802 Oryza sativa (japonica cultivar-group) partial mRNA for HD-ZIP
protein (hb1 gene)
Length = 1354
Score = 265 bits (574), Expect = 3e-069
Identities = 103/141 (73%), Positives = 122/141 (86%)
Frame = +3 / +1
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQ++ISG PEAATL RW+CQSY YHLG +L+S SD E LL M W +QDA+LCCSFKE
Sbjct: 928 AGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKE 1107
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCL 371
KPVFTF N+ G+DMLET+LVALQDLTLD+I DEPGR+AL + +PKLMEQG+ YLP+GVC+
Sbjct: 1108 KPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGREALFSNIPKLMEQGHVYLPSGVCM 1287
Query: 372 SGMGRHVSYEQAVAWKVLGED 434
SGMGRHVS++QAVAWKVL ED
Sbjct: 1288 SGMGRHVSFDQAVAWKVLTED 1350
Score = 167 bits (359), Expect = 1e-039
Identities = 82/141 (58%), Positives = 96/141 (68%)
Frame = -2 / -3
Query: 433 SSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSCR 254
SS TFQATA S ET RPIPD HTP GR PCSI+ G +A LPGSS+ILS VRSC+
Sbjct: 1349 SSVSTFQATA*SKETCRPIPDMHTPDGR*TWPCSINLGMFENNASLPGSSKILSNVRSCK 1170
Query: 253 ATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSAPK*YR*L 74
AT+ VS+MS+P L VNTGFSL EQHK AS +I + S + S+ L+ S P+ *L
Sbjct: 1169 ATREVSSMSSPALLANVNTGFSLNEQHKIASW*CHSIFNNCSASPSD*LSNSTPRW*W*L 990
Query: 73 WQIQRTSVAASGEPEISFCPA 11
WQ R VAASG+PEI CPA
Sbjct: 989 WQTHRARVAASGKPEIILCPA 927
Score = 117 bits (250), Expect = 1e-024
Identities = 59/137 (43%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 437 AVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM*CLSTRLVRDLVKGEIL 258
+VL ++FPS+ L+ +M H AH QV +AL HQF N+ C S+RL++D V+ E+L
Sbjct: 1353 SVLGKHFPSHGLIERNMPTHS*HAHA*WQVDMALLHQFGNV*EQCFSSRLIKDPVQCEVL 1174
Query: 257 QSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FPSLIRVADQIRPQVIPV 78
D F*HV S V + KHR FLE AAQ+S+L++P H Q+ F + + + P ++ V
Sbjct: 1173 *GDKGSF*HVQSCFVGKCKHRFFLE*AAQNSILVMP*HLQQLFCISV*LTK*LYP*MVMV 994
Query: 77 ALANPANKCSSFRGARN 27
ALANP++K FR R+
Sbjct: 993 ALANPSSKGCCFRETRD 943
Score = 105 bits (224), Expect = 5e-021
Identities = 59/139 (42%), Positives = 75/139 (53%)
Frame = +1 / +2
Query: 19 RS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSRKSL 198
R * L LK L GFA+AT G + + ++ N+ *+C G K L CAA SRK+
Sbjct: 935 RG*SLVSLKQQPLLDGFARATITI*G*SYLVNQTEMQNNC*RCYGITKMLFCAAHSRKNR 1114
Query: 199 CLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRLGCACLG 378
CL T+ + TC*K S + S T SL SL E+H + F N*W+RAM TC CAC
Sbjct: 1115 CLHLPTKQDWTC*KLPLSPYRTSHWTGSLMSLEEKHCSQTFPN*WSRAMSTCHQACACQE 1294
Query: 379 WAAMSPTSKLLLGKFSVRT 435
W M + + LGK RT
Sbjct: 1295 WVGMFLSIRPWLGKCLPRT 1351
>dbj|AK060584.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H08, full
insert sequence
Length = 1875
Score = 252 bits (545), Expect = 3e-065
Identities = 100/154 (64%), Positives = 119/154 (77%)
Frame = +3 / +2
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
GSPEA TL RWI +SYR+H GADL+ Q+ +S L W H D+++CCS K PVFTF
Sbjct: 1259 GSPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFA 1438
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTL+ALQD++L+KI D+ GRKAL E PK+M+QG+AYLP GVC+S MGR V
Sbjct: 1439 NQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPV 1618
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV*CDP 494
SYEQAVAWKVL +D HCLAF FVNWSFV* P
Sbjct: 1619 SYEQAVAWKVLSDDDTPHCLAFMFVNWSFV*EPP 1720
Score = 154 bits (331), Expect = 9e-036
Identities = 79/154 (51%), Positives = 89/154 (57%)
Frame = -2 / -1
Query: 493 GSHQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTS 314
G QT DQLT KARQC + SS RTF ATACS +T RP+ D HTP GR A PC + G S
Sbjct: 1719 GGSQTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPCCMILGNS 1540
Query: 313 ACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKS 134
SAF P SS I S S RA VVS+MS P WL KVNTG + +EQH S K
Sbjct: 1539 VHSAFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHIAFKE 1360
Query: 133 DSPA*SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S +SAP R*L I SV ASG+P
Sbjct: 1359 ESVLCESVRRRSAPVWNR*LLPIHLASVWASGDP 1258
Score = 108 bits (230), Expect = 8e-022
Identities = 58/149 (38%), Positives = 81/149 (54%)
Frame = -1 / -3
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
SDE PVDE EGEAV V+ ++ P + LLV H R AH +R+V L H L *
Sbjct: 1711 SDE*PVDEHEGEAVRRVVVAQDLPRHRLLVRHRPPHARHAHAAREVGETLLHDLGELCT* 1532
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
CL +++DL++ ++L+S+ R HV + LV E +HR L+ AA D + ++P Q
Sbjct: 1531 CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRSSLQGAAHD*IRVLPHCFQGRIR 1352
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFR 39
+L A +IR V VA NP K R
Sbjct: 1351 AL*VCAKEIRSSVESVAPPNPPCKRMGLR 1265
>dbj|AK101425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038E17, full
insert sequence
Length = 1165
Score = 252 bits (545), Expect = 3e-065
Identities = 100/154 (64%), Positives = 119/154 (77%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
GSPEA TL RWI +SYR+H GADL+ Q+ +S L W H D+++CCS K PVFTF
Sbjct: 574 GSPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFA 753
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTL+ALQD++L+KI D+ GRKAL E PK+M+QG+AYLP GVC+S MGR V
Sbjct: 754 NQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPV 933
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV*CDP 494
SYEQAVAWKVL +D HCLAF FVNWSFV* P
Sbjct: 934 SYEQAVAWKVLSDDDTPHCLAFMFVNWSFV*EPP 1035
Score = 154 bits (331), Expect = 9e-036
Identities = 79/154 (51%), Positives = 89/154 (57%)
Frame = -2 / -3
Query: 493 GSHQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTS 314
G QT DQLT KARQC + SS RTF ATACS +T RP+ D HTP GR A PC + G S
Sbjct: 1034 GGSQTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPCCMILGNS 855
Query: 313 ACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKS 134
SAF P SS I S S RA VVS+MS P WL KVNTG + +EQH S K
Sbjct: 854 VHSAFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHIAFKE 675
Query: 133 DSPA*SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S +SAP R*L I SV ASG+P
Sbjct: 674 ESVLCESVRRRSAPVWNR*LLPIHLASVWASGDP 573
Score = 108 bits (230), Expect = 8e-022
Identities = 58/149 (38%), Positives = 81/149 (54%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
SDE PVDE EGEAV V+ ++ P + LLV H R AH +R+V L H L *
Sbjct: 1026 SDE*PVDEHEGEAVRRVVVAQDLPRHRLLVRHRPPHARHAHAAREVGETLLHDLGELCT* 847
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
CL +++DL++ ++L+S+ R HV + LV E +HR L+ AA D + ++P Q
Sbjct: 846 CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRSSLQGAAHD*IRVLPHCFQGRIR 667
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFR 39
+L A +IR V VA NP K R
Sbjct: 666 AL*VCAKEIRSSVESVAPPNPPCKRMGLR 580
>dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M18, full
insert sequence
Length = 3082
Score = 252 bits (545), Expect = 3e-065
Identities = 100/154 (64%), Positives = 119/154 (77%)
Frame = +3 / +1
Query: 33 GSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFG 212
GSPEA TL RWI +SYR+H GADL+ Q+ +S L W H D+++CCS K PVFTF
Sbjct: 2473 GSPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFA 2652
Query: 213 NQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHV 392
NQ G+DMLETTL+ALQD++L+KI D+ GRKAL E PK+M+QG+AYLP GVC+S MGR V
Sbjct: 2653 NQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPV 2832
Query: 393 SYEQAVAWKVLGEDGNVHCLAFCFVNWSFV*CDP 494
SYEQAVAWKVL +D HCLAF FVNWSFV* P
Sbjct: 2833 SYEQAVAWKVLSDDDTPHCLAFMFVNWSFV*EPP 2934
Score = 154 bits (331), Expect = 9e-036
Identities = 79/154 (51%), Positives = 89/154 (57%)
Frame = -2 / -3
Query: 493 GSHQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTS 314
G QT DQLT KARQC + SS RTF ATACS +T RP+ D HTP GR A PC + G S
Sbjct: 2933 GGSQTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPCCMILGNS 2754
Query: 313 ACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKS 134
SAF P SS I S S RA VVS+MS P WL KVNTG + +EQH S K
Sbjct: 2753 VHSAFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHIAFKE 2574
Query: 133 DSPA*SEWLTKSAPK*YR*LWQIQRTSVAASGEP 32
+S +SAP R*L I SV ASG+P
Sbjct: 2573 ESVLCESVRRRSAPVWNR*LLPIHLASVWASGDP 2472
Score = 108 bits (230), Expect = 8e-022
Identities = 58/149 (38%), Positives = 81/149 (54%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIALFHQFRNLRM* 306
SDE PVDE EGEAV V+ ++ P + LLV H R AH +R+V L H L *
Sbjct: 2925 SDE*PVDEHEGEAVRRVVVAQDLPRHRLLVRHRPPHARHAHAAREVGETLLHDLGELCT* 2746
Query: 305 CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAAQDSVLMVPEHCQK*FP 126
CL +++DL++ ++L+S+ R HV + LV E +HR L+ AA D + ++P Q
Sbjct: 2745 CLPAIIIKDLLERDVLESNQRRLQHVEAGLVGEGEHRSSLQGAAHD*IRVLPHCFQGRIR 2566
Query: 125 SLIRVADQIRPQVIPVALANPANKCSSFR 39
+L A +IR V VA NP K R
Sbjct: 2565 AL*VCAKEIRSSVESVAPPNPPCKRMGLR 2479
>dbj|AK061741.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E12, full
insert sequence
Length = 1481
Score = 204 bits (440), Expect(2) = 6e-065
Identities = 80/114 (70%), Positives = 99/114 (86%)
Frame = +3 / +2
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQK+ISG PEA TL RWICQSY++HLG +L+ +D AGE+LL M WD++DA+LCCSFKE
Sbjct: 590 AGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKE 769
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYL 353
KPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQ ++L
Sbjct: 770 KPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQVESHL 931
Score = 144 bits (310), Expect(2) = 1e-056
Identities = 71/109 (65%), Positives = 78/109 (71%)
Frame = -2 / -3
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS* 158
CSI+FG S AFLP SS ILS RS RAT+ VS+M +PI L KVNTGFSLKEQHK AS
Sbjct: 915 CSINFGISLYRAFLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFSLKEQHKIASS 736
Query: 157 WSQNIVKSDSPA*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S +I S SPA S L+ S PK *LWQIQR SV ASG+PEI FCPA
Sbjct: 735 *SHSIFNSASPASSACLSNSTPKWNW*LWQIQRASVGASGKPEIIFCPA 589
Score = 133 bits (284), Expect(2) = 9e-036
Identities = 64/117 (54%), Positives = 73/117 (62%)
Frame = +1 / +3
Query: 10 LLGRS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
+LGR *F A LK GFAKAT WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 588 MLGRR*FQASLKPQR*LVGFAKATSSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 767
Query: 190 KSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNRAMRTCRL 360
KSLCLL TRW+ TC*K L SL KIS TR L V R Y R RN*WNR TC++
Sbjct: 768 KSLCLLLPTRWD*TC*KHLSSLSKISHWTRYLMKPVGRPYTTRSRN*WNR*RATCKI 938
Score = 123 bits (264), Expect(2) = 2e-035
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / +2
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 1034 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 1213
Score = 120 bits (257), Expect(2) = 1e-040
Identities = 63/114 (55%), Positives = 79/114 (69%)
Frame = -1 / -2
Query: 353 QVRIALFHQFRNLRM*CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLERAA 174
QV + LFHQFR+L +* L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFLER A
Sbjct: 931 QVALYLFHQFRDLVV*GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLERTA 752
Query: 173 QDSVLMVPEHCQK*FPSLIRVADQIRPQVIPVALANPANKCSSFRGARN*LLPS 12
Q+SV ++P H Q FPS+I + + PQ+ VALANP + FR A N LLPS
Sbjct: 751 QNSVFVIP*HFQ*CFPSIICLPK*LHPQMELVALANPTS*RWGFREA*NYLLPS 590
Score = 102 bits (218), Expect(2) = 1e-056
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*P 338
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *P
Sbjct: 1209 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*P 1066
Score = 73.5 bits (154), Expect(2) = 1e-040
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIAL 336
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + L
Sbjct: 1213 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTL 1064
Score = 70.7 bits (148), Expect(2) = 6e-065
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2 / +1
Query: 335 TGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
+GL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 1063 SGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 1212
Score = 52.4 bits (108), Expect(2) = 2e-035
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVSLGGG 100
CWAE NF LP*S SLDLPKLPV GGG
Sbjct: 589 CWAEDNFRLP*SPNASSLDLPKLPVPFGGG 678
Score = 44.6 bits (91), Expect(2) = 9e-036
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1 / +3
Query: 337 RAMRTCRLGCACLGWAAMSPTSKLLLGKFSVRTATCTA 450
R TC + CAC GW AM +SKL G+ S +T CTA
Sbjct: 1065 RVTCTCLVECACPGWGAMFLSSKL*HGRCSEKTTMCTA 1178
>gb|CV152400.1|CV152400 LS11-S.SEQ Cold stressed rice cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 637
Score = 204 bits (440), Expect(2) = 2e-057
Identities = 80/111 (72%), Positives = 97/111 (87%)
Frame = +3 / +2
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKE 191
AGQK+ISG PEA TL RWICQSY++HLG +L+ +D AGE+LL M WD++DA+LC SFKE
Sbjct: 239 AGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCXSFKE 418
Query: 192 KPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGY 344
KPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQGY
Sbjct: 419 KPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGY 571
Score = 145 bits (311), Expect(2) = 3e-039
Identities = 71/110 (64%), Positives = 78/110 (70%)
Frame = -2 / -2
Query: 340 PCSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS 161
PCSI+FG S AFLP SS ILS RS RAT+ VS+M +PI L KVNTGFSLK QHK AS
Sbjct: 567 PCSINFGISLYRAFLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFSLKXQHKIAS 388
Query: 160 *WSQNIVKSDSPA*SEWLTKSAPK*YR*LWQIQRTSVAASGEPEISFCPA 11
S +I S SPA S L+ S PK *LWQIQR SV ASG+PEI FCPA
Sbjct: 387 S*SHSIFNSASPASSACLSNSTPKWNW*LWQIQRASVGASGKPEIIFCPA 238
Score = 127 bits (272), Expect(2) = 5e-030
Identities = 62/110 (56%), Positives = 69/110 (62%)
Frame = +1 / +3
Query: 10 LLGRS*FLAPLKLLHLFAGFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
+LGR *F A LK GFAKAT WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 237 MLGRR*FQASLKPQR*LVGFAKATSSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAXLSR 416
Query: 190 KSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMRRFRN*WNR 339
KSLCLL TRW+ TC*K L SL KIS TR L V R Y R RN*WNR
Sbjct: 417 KSLCLLLPTRWD*TC*KHLSSLSKISHWTRYLMKPVGRPYTTRSRN*WNR 566
Score = 119 bits (254), Expect(2) = 3e-028
Identities = 62/117 (52%), Positives = 79/117 (67%)
Frame = -1 / -1
Query: 362 PSRQVRIALFHQFRNLRM*CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLE 183
P + + LFHQFR+L +* L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFLE
Sbjct: 589 PPGRYTVPLFHQFRDLVV*GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLE 410
Query: 182 RAAQDSVLMVPEHCQK*FPSLIRVADQIRPQVIPVALANPANKCSSFRGARN*LLPS 12
R AQ+SV ++P H Q FPS+I + + PQ+ VALANP + FR A N LLPS
Sbjct: 409 RXAQNSVFVIP*HFQ*CFPSIICLPK*LHPQMELVALANPTS*RWGFREA*NYLLPS 239
Score = 78.5 bits (165), Expect(3) = 5e-025
Identities = 38/73 (52%), Positives = 45/73 (61%)
Frame = +2 / +1
Query: 125 WGITFDNVLGPSRRCLVLLFQGKACVYFRQPDGS*HVRNDFSRSARSHP*QDL*RAW*KG 304
WG T +N +G RR VL FQGKACVYF Q DG+ H RN RS RS QD+* + *+G
Sbjct: 352 WGSTIENAMGLRRRYFVLXFQGKACVYFCQRDGTKHARNISRRSPRSLTGQDI**SR*EG 531
Query: 305 TTCGGSETDGTGL 343
E DGTG+
Sbjct: 532 PIQRDPEIDGTGV 570
Score = 52.4 bits (108), Expect(3) = 5e-025
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVSLGGG 100
CWAE NF LP*S SLDLPKLPV GGG
Sbjct: 238 CWAEDNFRLP*SPNASSLDLPKLPVPFGGG 327
Score = 42.8 bits (87), Expect(2) = 2e-057
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3 / +3
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQA 407
+G YLP GVCL+ MGRH S+EQA
Sbjct: 564 RGTVYLPGGVCLARMGRHGSFEQA 635
Score = 40.9 bits (83), Expect(2) = 3e-039
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 409 TACS*ETWRPIPDRHTPAGRYA*P 338
+ACS E WRPI +HTP GRY P
Sbjct: 637 SACSKEPWRPIRAKHTPPGRYTVP 566
Score = 29.9 bits (59), Expect(2) = 3e-028
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1 / -3
Query: 407 SLLVGDMAAHPRQAHPSRQV 348
SLL MA HP QAH +RQV
Sbjct: 635 SLLERTMAPHPGQAHSTRQV 576
Score = 27.6 bits (54), Expect(2) = 5e-030
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 349 TCRLGCACLGWAAMSPTSKL 408
TC + CA GW AM +SKL
Sbjct: 577 TCLVECAWPGWGAMVLSSKL 636
Score = 25.4 bits (49), Expect(3) = 5e-025
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2 / +2
Query: 338 GLCVPAGWGVPVWDGPPCLLRAS 406
G VPA W V DG P RAS
Sbjct: 566 GYRVPAWWSVLGPDGAPWFFRAS 634
>dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M14, full
insert sequence
Length = 3140
Score = 223 bits (481), Expect = 2e-056
Identities = 90/157 (57%), Positives = 110/157 (70%)
Frame = +3 / +3
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G K SPEA TL WI +SYR H GAD+ + +S L + W H DA+LCCS K
Sbjct: 2370 GMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLKPA 2549
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
P+FTF N G+D+LETTLV LQD++L+ I D+ GRKAL +E PK+M+QG+ YLP GVC S
Sbjct: 2550 PMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKS 2729
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SYEQAVAWKVL +D HCLAF VNW+F+*
Sbjct: 2730 SMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM* 2840
Score = 116 bits (247), Expect(2) = 3e-026
Identities = 57/106 (53%), Positives = 62/106 (58%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
K QLT KARQC SS RTF ATACS + RP+ D TP GR PC + G S SAF
Sbjct: 2833 KVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKPCCMILGNSEHSAF 2654
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS 161
P SS I+S S R T VVS MS P L KVN G +EQH AS
Sbjct: 2653 RPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAGFREQHSIAS 2516
Score = 26.3 bits (51), Expect(2) = 3e-026
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -2 / -2
Query: 100 SAPK*YR*LWQIQRTSVAASGEPEISFCP 14
SAP * *L IQ SV+ASGE F P
Sbjct: 2455 SAPV*AL*LLPIQLASVSASGEAGGCFIP 2369
>dbj|AK058915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A07, full
insert sequence
Length = 1011
Score = 221 bits (477), Expect = 7e-056
Identities = 89/157 (56%), Positives = 109/157 (69%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEK 194
G K SPEA TL WI +SYR H GAD+ + +S L + W H DA+LCCS K
Sbjct: 292 GMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLKPA 471
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLS 374
P+FTF N G+D+LETTLV LQD++L+ I D+ GRK L +E PK+M+QG+ YLP GVC S
Sbjct: 472 PMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKTLCSEFPKIMQQGFTYLPGGVCKS 651
Query: 375 GMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
MGR SYEQAVAWKVL +D HCLAF VNW+F+*
Sbjct: 652 SMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM* 762
Score = 114 bits (243), Expect(2) = 1e-025
Identities = 56/106 (52%), Positives = 61/106 (57%)
Frame = -2 / -2
Query: 478 KDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAF 299
K QLT KARQC SS RTF ATACS + RP+ D TP GR PC + G S S F
Sbjct: 755 KVQLTSMKARQCGASSSLRTFHATACSYDACRPMLDLQTPPGR*VKPCCMILGNSEHSVF 576
Query: 298 LPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS 161
P SS I+S S R T VVS MS P L KVN G +EQH AS
Sbjct: 575 RPSSSRIISSEMSWRLTSVVSRMSRPALLAKVNIGAGFREQHSIAS 438
Score = 26.3 bits (51), Expect(2) = 1e-025
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -2 / -2
Query: 100 SAPK*YR*LWQIQRTSVAASGEPEISFCP 14
SAP * *L IQ SV+ASGE F P
Sbjct: 377 SAPV*AL*LLPIQLASVSASGEAGGCFIP 291
>gb|AACV01021807.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021807, whole
genome shotgun sequence
Length = 45064
Score = 123 bits (264), Expect(3) = 2e-038
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / -2
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 28347 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 28168
Score = 102 bits (218), Expect(4) = 3e-046
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -2 / +2
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*P 338
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *P
Sbjct: 28172 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*P 28315
Score = 99.1 bits (210), Expect(4) = 5e-053
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +3 / -2
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYL 353
F+EKPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQ ++L
Sbjct: 28620 FQEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQVESHL 28450
Score = 73.5 bits (154), Expect(4) = 5e-032
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1 / +1
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIAL 336
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + L
Sbjct: 28168 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTL 28317
Score = 70.7 bits (148), Expect(4) = 3e-046
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = -2 / +2
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLK 182
CSI+FG S AFLP SS ILS RS RAT+ VS+M +PI L KVNTGFS K
Sbjct: 28466 CSINFGISLYRAFLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFS*K 28621
Score = 70.7 bits (148), Expect(4) = 5e-053
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2 / -1
Query: 335 TGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
+GL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 28318 SGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 28169
Score = 69.8 bits (146), Expect(4) = 5e-032
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1 / +1
Query: 353 QVRIALFHQFRNLRM*CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLE 183
QV + LFHQFR+L +* L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFL+
Sbjct: 28450 QVALYLFHQFRDLVV*GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLK 28620
Score = 69.3 bits (145), Expect(4) = 5e-053
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3 / -3
Query: 66 ICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
IC R+HLG +L+ +D AGE+LL M WD++DA+LCCSFK
Sbjct: 28862 ICGVCRFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFK 28740
Score = 50.6 bits (104), Expect(4) = 5e-053
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / -1
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQK+ISG PEA TL RWICQSY+
Sbjct: 29089 AGQKIISGFPEAPTLARWICQSYQ 29018
Score = 49.6 bits (102), Expect(4) = 3e-046
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -2 / +3
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQIQR SV ASG+PEI FCPA
Sbjct: 29016 YW*LWQIQRASVGASGKPEIIFCPA 29090
Score = 46.4 bits (95), Expect(3) = 2e-038
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1 / -1
Query: 64 GFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
GF G WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 28864 GFVVFAGSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 28739
Score = 46.4 bits (95), Expect(3) = 2e-038
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2 / -3
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVS 88
CWAE NF LP*S SLDLPKLPVS
Sbjct: 29090 CWAEDNFRLP*SPNASSLDLPKLPVS 29013
Score = 43.7 bits (89), Expect(4) = 3e-046
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1 / +3
Query: 191 FLERAAQDSVLMVPEHCQK*FPSLIRVADQIRPQVIPVALANP 63
+LER AQ+SV ++P H Q FPS+I + + PQ+ P NP
Sbjct: 28737 YLERTAQNSVFVIP*HFQ*CFPSIICLPK*LHPQMEPANTTNP 28865
Score = 37.7 bits (76), Expect(4) = 5e-032
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / +1
Query: 84 TGSFGKSSEQV*QLQGSQKLASAQQYS 4
TGSFGKS+E LQGS KL+SAQ S
Sbjct: 29017 TGSFGKSNELALGLQGSLKLSSAQHSS 29097
Score = 37.3 bits (75), Expect(4) = 5e-032
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2 / +1
Query: 190 SLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSAPK 89
+LKEQHK AS S +I S SPA S L+ S PK
Sbjct: 28738 TLKEQHKIASS*SHSIFNSASPASSACLSNSTPK 28839
>ref|NM_188279.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2697
Score = 159 bits (342), Expect(3) = 5e-052
Identities = 63/108 (58%), Positives = 80/108 (74%)
Frame = +3 / +1
Query: 114 SDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEP 293
++ + ES+L W H A+LCCS K PVFTF NQ G+DMLETTLVALQD+TL+K+ D+
Sbjct: 2323 ANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQ 2502
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDG 437
GRK L E+P +MEQG A + GVC+S +GR SYE+AVAWKV+ DG
Sbjct: 2503 GRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDG 2646
Score = 93.2 bits (197), Expect(3) = 7e-024
Identities = 47/103 (45%), Positives = 57/103 (55%)
Frame = -2 / -2
Query: 436 PSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSC 257
PS TF ATA S + P D HTP +A PCS+ G+S FLP SS+ S V S
Sbjct: 2645 PSPSTTFHATAFSYDAALPTLDTHTPPSMHAIPCSMMLGSSVHRFFLP*SSKTFSSVMSW 2466
Query: 256 RATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
AT+VVS+MS P W VNTG +L+EQ A Q + DS
Sbjct: 2465 SATRVVSSMSRPDWFANVNTGIALREQQSMALG*CQTAFRIDS 2337
Score = 51.9 bits (107), Expect(3) = 5e-052
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3 / +1
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSD 119
A +L +PEAATL RWICQSYR+H G +L+ D
Sbjct: 2215 AAAQLSPVTPEAATLPRWICQSYRFHFGDELIKSVD 2322
Score = 35.9 bits (72), Expect(3) = 5e-052
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3 / +1
Query: 426 GEDGNVHCLAFCFVNWSFV* 485
G+ G HC+ F F+NW+F+*
Sbjct: 2638 GDGGGAHCICFMFINWTFL* 2697
Score = 32.2 bits (64), Expect(3) = 7e-024
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -2 / -2
Query: 109 LTKSAPK*YR*LWQIQRTSVAASG 38
L S+PK* *LWQI SVAASG
Sbjct: 2312 LMSSSPK*NL*LWQIHLGSVAASG 2241
Score = 26.7 bits (52), Expect(3) = 7e-024
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / -1
Query: 485 SDEGPVDETEGEAVHVAVL 429
S EGPVDE E +AV A +
Sbjct: 2697 SKEGPVDEHEADAVGAAAV 2641
>dbj|AK112091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A01, full
insert sequence
Length = 1429
Score = 159 bits (342), Expect(3) = 5e-052
Identities = 63/108 (58%), Positives = 80/108 (74%)
Frame = +3 / +3
Query: 114 SDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEP 293
++ + ES+L W H A+LCCS K PVFTF NQ G+DMLETTLVALQD+TL+K+ D+
Sbjct: 924 ANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQ 1103
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDG 437
GRK L E+P +MEQG A + GVC+S +GR SYE+AVAWKV+ DG
Sbjct: 1104 GRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDG 1247
Score = 93.2 bits (197), Expect(3) = 8e-024
Identities = 47/103 (45%), Positives = 57/103 (55%)
Frame = -2 / -1
Query: 436 PSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSAFLPGSSEILSRVRSC 257
PS TF ATA S + P D HTP +A PCS+ G+S FLP SS+ S V S
Sbjct: 1246 PSPSTTFHATAFSYDAALPTLDTHTPPSMHAIPCSMMLGSSVHRFFLP*SSKTFSSVMSW 1067
Query: 256 RATKVVSNMSTPIWLPKVNTGFSLKEQHKTAS*WSQNIVKSDS 128
AT+VVS+MS P W VNTG +L+EQ A Q + DS
Sbjct: 1066 SATRVVSSMSRPDWFANVNTGIALREQQSMALG*CQTAFRIDS 938
Score = 51.9 bits (107), Expect(3) = 5e-052
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3 / +3
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSD 119
A +L +PEAATL RWICQSYR+H G +L+ D
Sbjct: 816 AAAQLSPVTPEAATLPRWICQSYRFHFGDELIKSVD 923
Score = 35.9 bits (72), Expect(3) = 5e-052
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3 / +3
Query: 426 GEDGNVHCLAFCFVNWSFV* 485
G+ G HC+ F F+NW+F+*
Sbjct: 1239 GDGGGAHCICFMFINWTFL* 1298
Score = 32.2 bits (64), Expect(3) = 8e-024
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 109 LTKSAPK*YR*LWQIQRTSVAASG 38
L S+PK* *LWQI SVAASG
Sbjct: 913 LMSSSPK*NL*LWQIHLGSVAASG 842
Score = 26.7 bits (52), Expect(3) = 8e-024
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / -3
Query: 485 SDEGPVDETEGEAVHVAVL 429
S EGPVDE E +AV A +
Sbjct: 1298 SKEGPVDEHEADAVGAAAV 1242
>gb|AACV01005752.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005752, whole
genome shotgun sequence
Length = 45615
Score = 112 bits (239), Expect(4) = 1e-051
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / -3
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+ YLP+GVC+SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 24841 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 24695
Score = 95.9 bits (203), Expect(4) = 1e-051
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = +3 / -1
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
F+EKPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQ
Sbjct: 25119 FQEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQ 24964
Score = 74.8 bits (157), Expect(3) = 1e-029
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = -2 / +3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGR 350
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR
Sbjct: 24699 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR 24830
Score = 69.8 bits (146), Expect(3) = 1e-029
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -2 / +2
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKE 179
CSI+ G +A PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFS K+
Sbjct: 24965 CSINLGMFENNASFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFS*KK 25123
Score = 51.0 bits (105), Expect(4) = 1e-051
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3 / -2
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQ++ISG PEAATL RW+CQSY+
Sbjct: 25865 AGQRIISGFPEAATLARWVCQSYQ 25794
Score = 41.8 bits (85), Expect(3) = 1e-029
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQ R VAASG+PEI CPA
Sbjct: 25792 YW*LWQTHRARVAASGKPEIILCPA 25866
Score = 25.8 bits (50), Expect(4) = 1e-051
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1 / -1
Query: 115 RIKLGNHF*QCSGTIKTLSCAALSR 189
++++ N+ *+C G K L CAA SR
Sbjct: 25647 QMEMQNNC*RCYGITKMLFCAAHSR 25573
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete
sequence
Length = 178692
Score = 123 bits (264), Expect(3) = 2e-037
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / -3
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 97630 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 97451
Score = 102 bits (218), Expect(4) = 1e-044
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -2 / +3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*P 338
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *P
Sbjct: 97455 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*P 97598
Score = 99.1 bits (210), Expect(4) = 3e-051
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +3 / -3
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYL 353
F+EKPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQ ++L
Sbjct: 97903 FQEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQVESHL 97733
Score = 73.5 bits (154), Expect(4) = 2e-030
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1 / +2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIAL 336
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + L
Sbjct: 97451 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTL 97600
Score = 70.7 bits (148), Expect(4) = 1e-044
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = -2 / +3
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLK 182
CSI+FG S AFLP SS ILS RS RAT+ VS+M +PI L KVNTGFS K
Sbjct: 97749 CSINFGISLYRAFLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFS*K 97904
Score = 70.7 bits (148), Expect(4) = 3e-051
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2 / -2
Query: 335 TGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
+GL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 97601 SGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 97452
Score = 69.8 bits (146), Expect(4) = 2e-030
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1 / +2
Query: 353 QVRIALFHQFRNLRM*CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLE 183
QV + LFHQFR+L +* L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFL+
Sbjct: 97733 QVALYLFHQFRDLVV*GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLK 97903
Score = 69.3 bits (145), Expect(4) = 3e-051
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3 / -1
Query: 66 ICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
IC R+HLG +L+ +D AGE+LL M WD++DA+LCCSFK
Sbjct: 98145 ICGVCRFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFK 98023
Score = 50.6 bits (104), Expect(4) = 3e-051
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / -2
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQK+ISG PEA TL RWICQSY+
Sbjct: 98372 AGQKIISGFPEAPTLARWICQSYQ 98301
Score = 49.6 bits (102), Expect(4) = 1e-044
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQIQR SV ASG+PEI FCPA
Sbjct: 98299 YW*LWQIQRASVGASGKPEIIFCPA 98373
Score = 46.4 bits (95), Expect(3) = 2e-037
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1 / -2
Query: 64 GFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
GF G WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 98147 GFVVFAGSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 98022
Score = 46.4 bits (95), Expect(3) = 2e-037
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2 / -1
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVS 88
CWAE NF LP*S SLDLPKLPVS
Sbjct: 98373 CWAEDNFRLP*SPNASSLDLPKLPVS 98296
Score = 43.7 bits (89), Expect(4) = 1e-044
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1 / +1
Query: 191 FLERAAQDSVLMVPEHCQK*FPSLIRVADQIRPQVIPVALANP 63
+LER AQ+SV ++P H Q FPS+I + + PQ+ P NP
Sbjct: 98020 YLERTAQNSVFVIP*HFQ*CFPSIICLPK*LHPQMEPANTTNP 98148
Score = 37.7 bits (76), Expect(4) = 2e-030
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / +2
Query: 84 TGSFGKSSEQV*QLQGSQKLASAQQYS 4
TGSFGKS+E LQGS KL+SAQ S
Sbjct: 98300 TGSFGKSNELALGLQGSLKLSSAQHSS 98380
Score = 37.3 bits (75), Expect(4) = 2e-030
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2 / +2
Query: 190 SLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSAPK 89
+LKEQHK AS S +I S SPA S L+ S PK
Sbjct: 98021 TLKEQHKIASS*SHSIFNSASPASSACLSNSTPK 98122
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBb0043C10, complete sequence
Length = 108688
Score = 112 bits (239), Expect(3) = 2e-050
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / -3
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+ YLP+GVC+SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 80153 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 80007
Score = 95.9 bits (203), Expect(3) = 2e-050
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = +3 / -1
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
F+EKPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQ
Sbjct: 80431 FQEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQ 80276
Score = 74.8 bits (157), Expect(3) = 7e-029
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = -2 / +1
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGR 350
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR
Sbjct: 80011 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR 80142
Score = 69.8 bits (146), Expect(3) = 7e-029
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -2 / +3
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKE 179
CSI+ G +A PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFS K+
Sbjct: 80277 CSINLGMFENNASFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFS*KK 80435
Score = 51.0 bits (105), Expect(3) = 2e-050
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3 / -2
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQ++ISG PEAATL RW+CQSY+
Sbjct: 81177 AGQRIISGFPEAATLARWVCQSYQ 81106
Score = 41.8 bits (85), Expect(3) = 7e-029
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / +2
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQ R VAASG+PEI CPA
Sbjct: 81104 YW*LWQTHRARVAASGKPEIILCPA 81178
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 112 bits (239), Expect(3) = 5e-048
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / +2
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+ YLP+GVC+SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 535763 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 535909
Score = 95.9 bits (203), Expect(3) = 5e-048
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = +3 / +3
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
F+EKPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQ
Sbjct: 535485 FQEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQ 535640
Score = 74.8 bits (157), Expect(3) = 1e-026
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = -2 / -1
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGR 350
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR
Sbjct: 535905 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR 535774
Score = 69.8 bits (146), Expect(3) = 1e-026
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -2 / -3
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKE 179
CSI+ G +A PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFS K+
Sbjct: 535639 CSINLGMFENNASFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFS*KK 535481
Score = 51.0 bits (105), Expect(3) = 5e-048
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3 / +1
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQ++ISG PEAATL RW+CQSY+
Sbjct: 534739 AGQRIISGFPEAATLARWVCQSYQ 534810
Score = 41.8 bits (85), Expect(3) = 1e-026
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / -2
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQ R VAASG+PEI CPA
Sbjct: 534812 YW*LWQTHRARVAASGKPEIILCPA 534738
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 123 bits (264), Expect(3) = 1e-034
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / +1
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 4309432 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 4309611
Score = 102 bits (218), Expect(4) = 2e-040
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*P 338
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *P
Sbjct: 4309607 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*P 4309464
Score = 99.1 bits (210), Expect(4) = 4e-047
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +3 / +1
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYL 353
F+EKPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQ ++L
Sbjct: 4309159 FQEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQVESHL 4309329
Score = 73.5 bits (154), Expect(4) = 3e-026
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIAL 336
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + L
Sbjct: 4309611 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTL 4309462
Score = 70.7 bits (148), Expect(4) = 4e-047
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 335 TGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
+GL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 4309461 SGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 4309610
Score = 70.7 bits (148), Expect(4) = 2e-040
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = -2 / -3
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLK 182
CSI+FG S AFLP SS ILS RS RAT+ VS+M +PI L KVNTGFS K
Sbjct: 4309313 CSINFGISLYRAFLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFS*K 4309158
Score = 69.8 bits (146), Expect(4) = 3e-026
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1 / -2
Query: 353 QVRIALFHQFRNLRM*CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLE 183
QV + LFHQFR+L +* L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFL+
Sbjct: 4309329 QVALYLFHQFRDLVV*GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLK 4309159
Score = 69.3 bits (145), Expect(4) = 4e-047
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3 / +2
Query: 66 ICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
IC R+HLG +L+ +D AGE+LL M WD++DA+LCCSFK
Sbjct: 4308917 ICGVCRFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFK 4309039
Score = 50.6 bits (104), Expect(4) = 4e-047
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / +3
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQK+ISG PEA TL RWICQSY+
Sbjct: 4308690 AGQKIISGFPEAPTLARWICQSYQ 4308761
Score = 49.6 bits (102), Expect(4) = 2e-040
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -2 / -1
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQIQR SV ASG+PEI FCPA
Sbjct: 4308763 YW*LWQIQRASVGASGKPEIIFCPA 4308689
Score = 46.4 bits (95), Expect(3) = 1e-034
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1 / +3
Query: 64 GFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
GF G WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 4308915 GFVVFAGSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 4309040
Score = 46.4 bits (95), Expect(3) = 1e-034
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVS 88
CWAE NF LP*S SLDLPKLPVS
Sbjct: 4308689 CWAEDNFRLP*SPNASSLDLPKLPVS 4308766
Score = 43.7 bits (89), Expect(4) = 2e-040
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1 / -1
Query: 191 FLERAAQDSVLMVPEHCQK*FPSLIRVADQIRPQVIPVALANP 63
+LER AQ+SV ++P H Q FPS+I + + PQ+ P NP
Sbjct: 4309042 YLERTAQNSVFVIP*HFQ*CFPSIICLPK*LHPQMEPANTTNP 4308914
Score = 37.7 bits (76), Expect(4) = 3e-026
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 84 TGSFGKSSEQV*QLQGSQKLASAQQYS 4
TGSFGKS+E LQGS KL+SAQ S
Sbjct: 4308762 TGSFGKSNELALGLQGSLKLSSAQHSS 4308682
Score = 37.3 bits (75), Expect(4) = 3e-026
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 190 SLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSAPK 89
+LKEQHK AS S +I S SPA S L+ S PK
Sbjct: 4309041 TLKEQHKIASS*SHSIFNSASPASSACLSNSTPK 4308940
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 112 bits (239), Expect(3) = 3e-046
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / +3
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+ YLP+GVC+SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 549591 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 549737
Score = 95.9 bits (203), Expect(3) = 3e-046
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = +3 / +1
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
F+EKPVFTF N+ G+DMLET+LVALQDLTLD+I DEPG++AL + +PKLMEQ
Sbjct: 549313 FQEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQ 549468
Score = 74.8 bits (157), Expect(3) = 8e-025
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGR 350
TKDQLTKQKARQ TL SS TFQATA S ET RPIPD HTP GR
Sbjct: 549733 TKDQLTKQKARQ*TLLSSASTFQATA*SKETCRPIPDMHTPDGR 549602
Score = 69.8 bits (146), Expect(3) = 8e-025
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -2 / -2
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLKE 179
CSI+ G +A PGSS+ILS VRSC+AT+ VS+MS+P L VNTGFS K+
Sbjct: 549467 CSINLGMFENNASFPGSSKILSNVRSCKATREVSSMSSPALLANVNTGFS*KK 549309
Score = 51.0 bits (105), Expect(3) = 3e-046
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3 / +2
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQ++ISG PEAATL RW+CQSY+
Sbjct: 548567 AGQRIISGFPEAATLARWVCQSYQ 548638
Score = 41.8 bits (85), Expect(3) = 8e-025
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / -1
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQ R VAASG+PEI CPA
Sbjct: 548640 YW*LWQTHRARVAASGKPEIILCPA 548566
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 123 bits (264), Expect(3) = 6e-034
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / +1
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 5523073 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 5523252
Score = 102 bits (218), Expect(4) = 2e-039
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*P 338
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *P
Sbjct: 5523248 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*P 5523105
Score = 99.1 bits (210), Expect(4) = 4e-046
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +3 / +1
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYL 353
F+EKPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQ ++L
Sbjct: 5522800 FQEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQVESHL 5522970
Score = 73.5 bits (154), Expect(4) = 3e-025
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1 / -2
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIAL 336
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + L
Sbjct: 5523252 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTL 5523103
Score = 70.7 bits (148), Expect(4) = 4e-046
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 335 TGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
+GL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 5523102 SGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 5523251
Score = 70.7 bits (148), Expect(4) = 2e-039
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = -2 / -3
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLK 182
CSI+FG S AFLP SS ILS RS RAT+ VS+M +PI L KVNTGFS K
Sbjct: 5522954 CSINFGISLYRAFLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFS*K 5522799
Score = 69.8 bits (146), Expect(4) = 3e-025
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1 / -2
Query: 353 QVRIALFHQFRNLRM*CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLE 183
QV + LFHQFR+L +* L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFL+
Sbjct: 5522970 QVALYLFHQFRDLVV*GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLK 5522800
Score = 69.3 bits (145), Expect(4) = 4e-046
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3 / +2
Query: 66 ICQSYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
IC R+HLG +L+ +D AGE+LL M WD++DA+LCCSFK
Sbjct: 5522558 ICGVCRFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFK 5522680
Score = 50.6 bits (104), Expect(4) = 4e-046
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / +3
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
AGQK+ISG PEA TL RWICQSY+
Sbjct: 5522331 AGQKIISGFPEAPTLARWICQSYQ 5522402
Score = 49.6 bits (102), Expect(4) = 2e-039
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -2 / -1
Query: 85 YR*LWQIQRTSVAASGEPEISFCPA 11
Y *LWQIQR SV ASG+PEI FCPA
Sbjct: 5522404 YW*LWQIQRASVGASGKPEIIFCPA 5522330
Score = 46.4 bits (95), Expect(3) = 6e-034
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1 / +3
Query: 64 GFAKATGITWGRIWSATRIKLGNHF*QCSGTIKTLSCAALSR 189
GF G WG + ++ LG H+*+C G KTL CA LSR
Sbjct: 5522556 GFVVFAGSIWGWSYLGRQMMLGKHY*KCYGITKTLFCAVLSR 5522681
Score = 46.4 bits (95), Expect(3) = 6e-034
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 11 CWAEANFWLP*SCYTCSLDLPKLPVS 88
CWAE NF LP*S SLDLPKLPVS
Sbjct: 5522330 CWAEDNFRLP*SPNASSLDLPKLPVS 5522407
Score = 43.7 bits (89), Expect(4) = 2e-039
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1 / -1
Query: 191 FLERAAQDSVLMVPEHCQK*FPSLIRVADQIRPQVIPVALANP 63
+LER AQ+SV ++P H Q FPS+I + + PQ+ P NP
Sbjct: 5522683 YLERTAQNSVFVIP*HFQ*CFPSIICLPK*LHPQMEPANTTNP 5522555
Score = 37.7 bits (76), Expect(4) = 3e-025
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3 / -2
Query: 84 TGSFGKSSEQV*QLQGSQKLASAQQYS 4
TGSFGKS+E LQGS KL+SAQ S
Sbjct: 5522403 TGSFGKSNELALGLQGSLKLSSAQHSS 5522323
Score = 37.3 bits (75), Expect(4) = 3e-025
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 190 SLKEQHKTAS*WSQNIVKSDSPA*SEWLTKSAPK 89
+LKEQHK AS S +I S SPA S L+ S PK
Sbjct: 5522682 TLKEQHKIASS*SHSIFNSASPASSACLSNSTPK 5522581
>gb|CH401282.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000119 genomic
scaffold, whole genome shotgun sequence
Length = 4546750
Score = 89.5 bits (189), Expect(4) = 8e-045
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +3 / -1
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QG+ YLP GVC S MGR SYEQAVAWKVL +D HCLAF VNW+F+*
Sbjct: 2976970 QGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM* 2976821
Score = 73.0 bits (153), Expect(4) = 8e-045
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3 / -2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
P+FTF N G+D+LETTLV LQD++L+ I D+ GRKAL +E PK+M+Q
Sbjct: 2977227 PMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 2977084
Score = 47.8 bits (98), Expect(4) = 8e-045
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / -3
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
S+R H GAD+ + +S L + W H DA+LCCS K
Sbjct: 2977439 SFRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 2977326
Score = 30.4 bits (60), Expect(4) = 8e-045
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -2
Query: 15 GQKLISGSPEAATLVRWICQSYR 83
G K SPEA TL WI +SYR
Sbjct: 2977629 GMKHPPASPEALTLASWIGRSYR 2977561
>ref|NT_107152.1| Oryza sativa (japonica cultivar-group)
Length = 2853905
Score = 89.5 bits (189), Expect(4) = 8e-045
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +3 / -3
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QG+ YLP GVC S MGR SYEQAVAWKVL +D HCLAF VNW+F+*
Sbjct: 2126253 QGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM* 2126104
Score = 73.0 bits (153), Expect(4) = 8e-045
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3 / -1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
P+FTF N G+D+LETTLV LQD++L+ I D+ GRKAL +E PK+M+Q
Sbjct: 2126510 PMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 2126367
Score = 47.8 bits (98), Expect(4) = 8e-045
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / -2
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
S+R H GAD+ + +S L + W H DA+LCCS K
Sbjct: 2126722 SFRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 2126609
Score = 30.4 bits (60), Expect(4) = 8e-045
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 15 GQKLISGSPEAATLVRWICQSYR 83
G K SPEA TL WI +SYR
Sbjct: 2126912 GMKHPPASPEALTLASWIGRSYR 2126844
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 161806
Score = 89.5 bits (189), Expect(4) = 9e-045
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +3 / +3
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QG+ YLP GVC S MGR SYEQAVAWKVL +D HCLAF VNW+F+*
Sbjct: 157014 QGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM* 157163
Score = 73.0 bits (153), Expect(4) = 9e-045
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
P+FTF N G+D+LETTLV LQD++L+ I D+ GRKAL +E PK+M+Q
Sbjct: 156757 PMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 156900
Score = 47.8 bits (98), Expect(4) = 9e-045
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
S+R H GAD+ + +S L + W H DA+LCCS K
Sbjct: 156545 SFRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 156658
Score = 30.4 bits (60), Expect(4) = 9e-045
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYR 83
G K SPEA TL WI +SYR
Sbjct: 156355 GMKHPPASPEALTLASWIGRSYR 156423
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of
library Monsanto from chromosome 12 of cultivar Nipponbare
of ssp. japonica of Oryza sativa (rice), complete sequence
Length = 61296
Score = 89.5 bits (189), Expect(4) = 9e-045
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +3 / +3
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QG+ YLP GVC S MGR SYEQAVAWKVL +D HCLAF VNW+F+*
Sbjct: 20634 QGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM* 20783
Score = 73.0 bits (153), Expect(4) = 9e-045
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3 / +1
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
P+FTF N G+D+LETTLV LQD++L+ I D+ GRKAL +E PK+M+Q
Sbjct: 20377 PMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 20520
Score = 47.8 bits (98), Expect(4) = 9e-045
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
S+R H GAD+ + +S L + W H DA+LCCS K
Sbjct: 20165 SFRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 20278
Score = 30.4 bits (60), Expect(4) = 9e-045
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / +1
Query: 15 GQKLISGSPEAATLVRWICQSYR 83
G K SPEA TL WI +SYR
Sbjct: 19975 GMKHPPASPEALTLASWIGRSYR 20043
>gb|AACV01025516.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025516, whole
genome shotgun sequence
Length = 38783
Score = 89.5 bits (189), Expect(4) = 9e-045
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +3 / +1
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
QG+ YLP GVC S MGR SYEQAVAWKVL +D HCLAF VNW+F+*
Sbjct: 24697 QGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM* 24846
Score = 73.0 bits (153), Expect(4) = 9e-045
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3 / +2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQ 338
P+FTF N G+D+LETTLV LQD++L+ I D+ GRKAL +E PK+M+Q
Sbjct: 24440 PMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQ 24583
Score = 47.8 bits (98), Expect(4) = 9e-045
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / +3
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFK 188
S+R H GAD+ + +S L + W H DA+LCCS K
Sbjct: 24228 SFRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLK 24341
Score = 30.4 bits (60), Expect(4) = 9e-045
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / +2
Query: 15 GQKLISGSPEAATLVRWICQSYR 83
G K SPEA TL WI +SYR
Sbjct: 24038 GMKHPPASPEALTLASWIGRSYR 24106
>gb|CB654750.1|CB654750 OSJNEc07I06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07I06 3', mRNA sequence
Length = 766
Score = 125 bits (268), Expect(3) = 1e-041
Identities = 49/91 (53%), Positives = 66/91 (72%)
Frame = +3 / -2
Query: 114 SDQAGESLLTMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEP 293
++ + ES+L W H A+LCCS K PVFTF NQ G+DMLE+T+VALQD+TL+K+ D+
Sbjct: 438 ANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLESTMVALQDMTLEKVFDDQ 259
Query: 294 GRKALHAEVPKLMEQGYAYLPAGVCLSGMGR 386
GRK L +E+P +MEQG A GVC+ +GR
Sbjct: 258 GRKTLCSELPIIMEQGMACTEGGVCV*SVGR 166
Score = 51.5 bits (106), Expect(3) = 1e-041
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3 / -2
Query: 12 AGQKLISGSPEAATLVRWICQSYRYHLGADLVSHSD 119
A +L +PEAATL RWICQSYR+H G +L+ D
Sbjct: 546 AAVQLSPVTPEAATLPRWICQSYRFHFGDELIKSVD 439
Score = 35.4 bits (71), Expect(3) = 1e-041
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 426 GEDGNVHCLAFCFVNWSFV 482
G+ G HC+ F F+NW+F+
Sbjct: 122 GDGGGAHCICFMFINWTFL 66
>gb|AY554037.1| Oryza sativa (japonica cultivar-group) clone S10307 Hox9 (hox9)
mRNA, partial cds
Length = 562
Score = 152 bits (327), Expect = 3e-035
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +3 / +1
Query: 285 DEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCF 464
DE GRKAL+ E+PKLMEQGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCF
Sbjct: 1 DEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCF 180
Query: 465 VNWSFV* 485
VNWSFV*
Sbjct: 181 VNWSFV* 201
Score = 127 bits (272), Expect = 1e-027
Identities = 52/65 (80%), Positives = 54/65 (83%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCSISFGTSACSA 302
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *PCSI+FG S A
Sbjct: 197 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*PCSINFGISLYRA 18
Query: 301 FLPGS 287
FLP S
Sbjct: 17 FLPAS 3
>gb|CG206831.1|CG206831 TOS0452 TAMU Rice Japonica Nipponbare BAC Library (Hind III) Oryza
sativa (japonica cultivar-group) genomic clone
TOSJNBh018O04h, DNA sequence
Length = 643
Score = 123 bits (264), Expect = 2e-026
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / +3
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 318 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 497
Score = 102 bits (218), Expect(2) = 6e-035
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -2 / -1
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*P 338
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP GRY *P
Sbjct: 493 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTPPGRYT*P 350
Score = 99.1 bits (210), Expect(3) = 1e-034
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +3 / +3
Query: 183 FKEKPVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYL 353
F+EKPVFTF N+MG++MLET+LVALQDL+LDKI DE GRKAL+ E+PKLMEQ ++L
Sbjct: 45 FQEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQVESHL 215
Score = 73.5 bits (154), Expect(2) = 6e-026
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -1 / -3
Query: 485 SDEGPVDETEGEAVHVAVLTENFPSNSLLVGDMAAHPRQAHPSRQVRIAL 336
S EGPVDE EGEAVH+ V +E+ P SLL +MA HP QAH +RQV + L
Sbjct: 497 SHEGPVDEAEGEAVHIVVFSEHLPCYSLLERNMAPHPGQAHSTRQVHVTL 348
Score = 70.7 bits (148), Expect(2) = 6e-035
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = -2 / -1
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTGFSLK 182
CSI+FG S AFLP SS ILS RS RAT+ VS+M +PI L KVNTGFS K
Sbjct: 199 CSINFGISLYRAFLPASSNILSSERSWRATRDVSSMFSPISLAKVNTGFS*K 44
Score = 70.7 bits (148), Expect(3) = 1e-034
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2 / +2
Query: 335 TGLCVPAGWGVPVWDGPPCLLRASCCLESSR*GRQRALPRLLFRQLVLRL 484
+GL VPA W V V DG PC RASC +E +R +Q ALPRLL RQLVLR+
Sbjct: 347 SGLRVPAWWSVLVRDGAPCFFRASCSMEGARRRQQCALPRLLLRQLVLRV 496
Score = 69.8 bits (146), Expect(2) = 6e-026
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1 / -3
Query: 353 QVRIALFHQFRNLRM*CLSTRLVRDLVKGEILQSD*SRF*HVNSHLVAESKHRLFLE 183
QV + LFHQFR+L +* L T ++ LV+ EIL+SD F*HV SHLV +SKHRLFL+
Sbjct: 215 QVALYLFHQFRDLVV*GLPTGFIKYLVQ*EILESDERCF*HV*SHLVGKSKHRLFLK 45
Score = 21.7 bits (41), Expect(3) = 1e-034
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1 / +3
Query: 520 SVHFCILCRRE 552
S FC LCRRE
Sbjct: 546 SPFFCNLCRRE 578
>gb|AACV01007440.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007440, whole
genome shotgun sequence
Length = 11259
Score = 100 bits (214), Expect(4) = 1e-034
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = +3 / +2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV*CDP 494
QG+AYLP GVC+S MGR VSYEQAVAWKVL +D HCLAF FVNWSFV* P
Sbjct: 4982 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV*EPP 5140
Score = 75.8 bits (159), Expect(2) = 7e-024
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -2 / -1
Query: 493 GSHQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCS 332
G QT DQLT KARQC + SS RTF ATACS +T RP+ D HTP GR A P S
Sbjct: 5139 GGSQTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPWS 4978
Score = 58.8 bits (122), Expect(2) = 7e-024
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / -2
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
C + G S SAF P SS I S S RA VVS+MS P WL KVNTG
Sbjct: 4892 CCMILGNSVHSAFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTG 4749
Score = 51.9 bits (107), Expect(4) = 1e-034
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3 / +3
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTF 209
++R+H GADL+ Q+ +S L W H D+++CCS K V F
Sbjct: 4533 NFRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKVSVVRLF 4667
Score = 36.8 bits (74), Expect(4) = 1e-034
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3 / +3
Query: 33 GSPEAATLVRWICQSYRY 86
GSPEA TL RWI +SYRY
Sbjct: 4290 GSPEAHTLARWIGRSYRY 4343
Score = 31.3 bits (62), Expect(4) = 1e-034
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1 / +2
Query: 187 RKSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMR 315
R LC S T+ TC +R * L + S RSL + RHY++
Sbjct: 4742 RLLLCSPSPTKPASTCWRRR*LLSRTSRSRRSLMMMAGRHYVQ 4870
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 100 bits (214), Expect(3) = 2e-033
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = +3 / -2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV*CDP 494
QG+AYLP GVC+S MGR VSYEQAVAWKVL +D HCLAF FVNWSFV* P
Sbjct: 10968827 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV*EPP 10968669
Score = 75.8 bits (159), Expect(2) = 6e-024
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -2 / +1
Query: 493 GSHQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCS 332
G QT DQLT KARQC + SS RTF ATACS +T RP+ D HTP GR A P S
Sbjct: 10968670 GGSQTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPWS 10968831
Score = 58.8 bits (122), Expect(2) = 6e-024
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / +2
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
C + G S SAF P SS I S S RA VVS+MS P WL KVNTG
Sbjct: 10968917 CCMILGNSVHSAFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTG 10969060
Score = 51.9 bits (107), Expect(3) = 2e-033
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3 / -3
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTF 209
++R+H GADL+ Q+ +S L W H D+++CCS K V F
Sbjct: 10969276 NFRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKVSVVRLF 10969142
Score = 31.3 bits (62), Expect(3) = 2e-033
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1 / -2
Query: 187 RKSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMR 315
R LC S T+ TC +R * L + S RSL + RHY++
Sbjct: 10969067 RLLLCSPSPTKPASTCWRRR*LLSRTSRSRRSLMMMAGRHYVQ 10968939
>ref|NT_079918.2| Oryza sativa (japonica cultivar-group)
Length = 553008
Score = 100 bits (214), Expect(3) = 2e-033
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = +3 / -2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV*CDP 494
QG+AYLP GVC+S MGR VSYEQAVAWKVL +D HCLAF FVNWSFV* P
Sbjct: 456752 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV*EPP 456594
Score = 75.8 bits (159), Expect(2) = 7e-024
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -2 / +1
Query: 493 GSHQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCS 332
G QT DQLT KARQC + SS RTF ATACS +T RP+ D HTP GR A P S
Sbjct: 456595 GGSQTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPWS 456756
Score = 58.8 bits (122), Expect(2) = 7e-024
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / +2
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
C + G S SAF P SS I S S RA VVS+MS P WL KVNTG
Sbjct: 456842 CCMILGNSVHSAFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTG 456985
Score = 51.9 bits (107), Expect(3) = 2e-033
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3 / -3
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTF 209
++R+H GADL+ Q+ +S L W H D+++CCS K V F
Sbjct: 457201 NFRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKVSVVRLF 457067
Score = 31.3 bits (62), Expect(3) = 2e-033
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1 / -2
Query: 187 RKSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMR 315
R LC S T+ TC +R * L + S RSL + RHY++
Sbjct: 456992 RLLLCSPSPTKPASTCWRRR*LLSRTSRSRRSLMMMAGRHYVQ 456864
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence
Length = 175704
Score = 100 bits (214), Expect(3) = 3e-033
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = +3 / +2
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV*CDP 494
QG+AYLP GVC+S MGR VSYEQAVAWKVL +D HCLAF FVNWSFV* P
Sbjct: 96257 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV*EPP 96415
Score = 75.8 bits (159), Expect(2) = 7e-024
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -2 / -1
Query: 493 GSHQTKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTPAGRYA*PCS 332
G QT DQLT KARQC + SS RTF ATACS +T RP+ D HTP GR A P S
Sbjct: 96414 GGSQTNDQLTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGR*AKPWS 96253
Score = 58.8 bits (122), Expect(2) = 7e-024
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -2 / -2
Query: 337 CSISFGTSACSAFLPGSSEILSRVRSCRATKVVSNMSTPIWLPKVNTG 194
C + G S SAF P SS I S S RA VVS+MS P WL KVNTG
Sbjct: 96167 CCMILGNSVHSAFRPSSSRIFSSEMSWRAISVVSSMSRPAWLAKVNTG 96024
Score = 51.9 bits (107), Expect(3) = 3e-033
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3 / +3
Query: 75 SYRYHLGADLVSHSDQAGESLLTMFWDHQDAVLCCSFKEKPVFTF 209
++R+H GADL+ Q+ +S L W H D+++CCS K V F
Sbjct: 95808 NFRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKVSVVRLF 95942
Score = 31.3 bits (62), Expect(3) = 3e-033
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1 / +2
Query: 187 RKSLCLLSATRWELTC*KRL*SLCKISPLTRSLTSLVERHYMR 315
R LC S T+ TC +R * L + S RSL + RHY++
Sbjct: 96017 RLLLCSPSPTKPASTCWRRR*LLSRTSRSRRSLMMMAGRHYVQ 96145
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1015E06
Length = 164583
Score = 82.6 bits (174), Expect(5) = 5e-031
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = +3 / -2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAY 350
PVFTF NQ G+DMLETTLVALQD+TL+K+ D+ GRK L E+P +MEQ +Y
Sbjct: 23285 PVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQV*SY 23130
Score = 51.5 bits (106), Expect(5) = 5e-031
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3 / -3
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDG 437
QG A + GVC+S +GR SYE+AVAWKV+ DG
Sbjct: 22705 QGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDG 22604
Score = 39.6 bits (80), Expect(5) = 5e-031
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -1
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
A +L +PEAATL RWICQSYR
Sbjct: 24030 AAAQLSPVTPEAATLPRWICQSYR 23959
Score = 35.9 bits (72), Expect(5) = 5e-031
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 426 GEDGNVHCLAFCFVNWSFV* 485
G+ G HC+ F F+NW+F+*
Sbjct: 22612 GDGGGAHCICFMFINWTFL* 22553
Score = 35.0 bits (70), Expect(5) = 5e-031
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3 / -3
Query: 114 SDQAGESLLTMFWDHQDAVLCCSFK 188
++ + ES+L W H A+LCCS K
Sbjct: 23767 ANSSNESILKAVWHHPSAILCCSLK 23693
>gb|AU181084.1|AU181084 AU181084 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10307, mRNA sequence
Length = 346
Score = 104 bits (222), Expect(2) = 8e-030
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3 / +1
Query: 360 GVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV 482
GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV
Sbjct: 112 GVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 234
Score = 91.3 bits (193), Expect(2) = 9e-023
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = -2 / -3
Query: 481 TKDQLTKQKARQCTLPSSPRTFQATACS*ETWRPIPDRHTP 359
TKDQLTKQKARQCTL SSP TF ATACS ETWRPIPD+HTP
Sbjct: 233 TKDQLTKQKARQCTLLSSPSTFHATACSKETWRPIPDKHTP 111
Score = 50.1 bits (103), Expect(2) = 8e-030
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +3 / +3
Query: 276 KISDEPGRKALHAEVPKLMEQGYAYLP 356
++ +E GRKAL+ E+PKLMEQGY YLP
Sbjct: 27 RVRNEAGRKALYNEIPKLMEQGYVYLP 107
Score = 39.6 bits (80), Expect(2) = 9e-023
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -1
Query: 355 GRYA*PCSISFGTSACSAFLPGS 287
GRY *PCSI+FG S AFLP S
Sbjct: 106 GRYT*PCSINFGISLYRAFLPAS 38
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 123 bits (264), Expect = 2e-026
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / +2
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 16388867 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 16389046
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 123 bits (264), Expect = 2e-026
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / +1
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 17577001 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 17577180
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 123 bits (264), Expect = 2e-026
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3 / +2
Query: 306 LHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
L + ++ QGY YLP GVCLSGMGRHVS+EQAVAWKVLGED NVHCLAFCFVNWSFV*
Sbjct: 17586041 LSISIQSVLVQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV* 17586220
>gb|AU173356.1|AU173356 AU173356 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2413, mRNA sequence
Length = 449
Score = 103 bits (220), Expect(2) = 2e-025
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +3 / +2
Query: 234 LETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAYLPAGVCLSGMGRHVSYEQAVA 413
LETTLVALQD+TL+K+ D+ GRK L E+P +MEQG A + GVC+S +GR SYE+AVA
Sbjct: 2 LETTLVALQDMTLEKVXDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVA 181
Query: 414 WKVLGEDG 437
WKV+ DG
Sbjct: 182 WKVVDGDG 205
Score = 35.9 bits (72), Expect(2) = 2e-025
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 426 GEDGNVHCLAFCFVNWSFV* 485
G+ G HC+ F F+NW+F+*
Sbjct: 197 GDGGGAHCICFMFINWTFL* 256
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 82.6 bits (174), Expect(5) = 2e-024
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = +3 / -2
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAY 350
PVFTF NQ G+DMLETTLVALQD+TL+K+ D+ GRK L E+P +MEQ +Y
Sbjct: 5424067 PVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQV*SY 5423912
Score = 51.5 bits (106), Expect(5) = 2e-024
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3 / -3
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDG 437
QG A + GVC+S +GR SYE+AVAWKV+ DG
Sbjct: 5423487 QGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDG 5423386
Score = 39.6 bits (80), Expect(5) = 2e-024
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -1
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
A +L +PEAATL RWICQSYR
Sbjct: 5424812 AAAQLSPVTPEAATLPRWICQSYR 5424741
Score = 35.9 bits (72), Expect(5) = 2e-024
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 426 GEDGNVHCLAFCFVNWSFV* 485
G+ G HC+ F F+NW+F+*
Sbjct: 5423394 GDGGGAHCICFMFINWTFL* 5423335
Score = 35.0 bits (70), Expect(5) = 2e-024
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3 / -3
Query: 114 SDQAGESLLTMFWDHQDAVLCCSFK 188
++ + ES+L W H A+LCCS K
Sbjct: 5424549 ANSSNESILKAVWHHPSAILCCSLK 5424475
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 82.6 bits (174), Expect(5) = 4e-024
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = +3 / -3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAY 350
PVFTF NQ G+DMLETTLVALQD+TL+K+ D+ GRK L E+P +MEQ +Y
Sbjct: 5426049 PVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQV*SY 5425894
Score = 51.5 bits (106), Expect(5) = 4e-024
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3 / -3
Query: 336 QGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDG 437
QG A + GVC+S +GR SYE+AVAWKV+ DG
Sbjct: 5424567 QGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDG 5424466
Score = 39.6 bits (80), Expect(5) = 4e-024
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
A +L +PEAATL RWICQSYR
Sbjct: 5426794 AAAQLSPVTPEAATLPRWICQSYR 5426723
Score = 35.9 bits (72), Expect(5) = 4e-024
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 426 GEDGNVHCLAFCFVNWSFV* 485
G+ G HC+ F F+NW+F+*
Sbjct: 5424474 GDGGGAHCICFMFINWTFL* 5424415
Score = 35.0 bits (70), Expect(5) = 4e-024
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 114 SDQAGESLLTMFWDHQDAVLCCSFK 188
++ + ES+L W H A+LCCS K
Sbjct: 5426531 ANSSNESILKAVWHHPSAILCCSLK 5426457
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 112 bits (239), Expect = 5e-023
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / +2
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+ YLP+GVC+SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 741953 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 742099
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
complete sequence
Length = 36192742
Score = 112 bits (239), Expect = 5e-023
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / +2
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+ YLP+GVC+SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 535763 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 535909
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 112 bits (239), Expect = 5e-023
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3 / +1
Query: 339 GYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFV* 485
G+ YLP+GVC+SGMGRHVS++QAVAWKVL ED NVHCLAFCFVNWSFV*
Sbjct: 535765 GHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV* 535911
>gb|AACV01000374.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000374, whole
genome shotgun sequence
Length = 23420
Score = 82.6 bits (174), Expect(3) = 2e-021
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = +3 / +3
Query: 195 PVFTFGNQMGVDMLETTLVALQDLTLDKISDEPGRKALHAEVPKLMEQGYAY 350
PVFTF NQ G+DMLETTLVALQD+TL+K+ D+ GRK L E+P +MEQ +Y
Sbjct: 23088 PVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQV*SY 23243
Score = 39.6 bits (80), Expect(3) = 2e-021
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 12 AGQKLISGSPEAATLVRWICQSYR 83
A +L +PEAATL RWICQSYR
Sbjct: 22343 AAAQLSPVTPEAATLPRWICQSYR 22414
Score = 35.0 bits (70), Expect(3) = 2e-021
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3 / +1
Query: 114 SDQAGESLLTMFWDHQDAVLCCSFK 188
++ + ES+L W H A+LCCS K
Sbjct: 22606 ANSSNESILKAVWHHPSAILCCSLK 22680
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,924,819,711
Number of Sequences: 438736
Number of extensions: 79250826
Number of successful extensions: 332179
Number of sequences better than 1.0e-020: 67
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 158827879175
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)