TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAW3d03.yg.2.1
(557 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_469566.1| Oryza sativa (japonica cultivar-group), mRNA 236 1e-060
gb|AACV01007799.1| Oryza sativa (japonica cultivar-group) c... 130 1e-043
gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17... 130 6e-043
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 130 4e-040
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 130 2e-039
ref|XM_467688.1| Oryza sativa (japonica cultivar-group), mRNA 129 2e-034
gb|AQ160958.1|AQ160958 nbxb0006A20r CUGI Rice BAC Library O... 130 1e-028
gb|AQ259758.1|AQ259758 nbxb0023D16r CUGI Rice BAC Library O... 130 1e-028
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 130 1e-028
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 130 1e-028
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 130 1e-028
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 102 2e-026
dbj|AP005112.3| Oryza sativa (japonica cultivar-group) geno... 102 2e-026
gb|AACV01005368.1| Oryza sativa (japonica cultivar-group) c... 102 2e-026
gb|AQ272632.1|AQ272632 nbxb0028G04r CUGI Rice BAC Library O... 91 6e-025
dbj|AK121000.1| Oryza sativa (japonica cultivar-group) cDNA... 70 1e-022
ref|NM_196042.1| Oryza sativa (japonica cultivar-group) put... 70 1e-022
dbj|AK121135.1| Oryza sativa (japonica cultivar-group) cDNA... 71 4e-021
ref|XM_463649.1| Oryza sativa (japonica cultivar-group), p... 71 4e-021
>ref|XM_469566.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3042
Score = 236 bits (510), Expect = 1e-060
Identities = 109/177 (61%), Positives = 113/177 (63%)
Frame = -2 / +1
Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYH 353
AP + QE I D EE LR+ A+G TR RLMSNH VV PVY
Sbjct: 517 APVIYSQETISYIEGLDVMSGEEDRENILRARATGKAVLTRPFRLMSNHLGVVLTFPVYL 696
Query: 352 AXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMY 173
D EDR AA AG GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY
Sbjct: 697 VDLPNDTAVEDRVAATAGYLGGAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMY 876
Query: 172 XSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
SEVPL PS SH LDFGDP RKH MVCRYR HV SAI+TPSGVFVICMLVG
Sbjct: 877 GSEVPLGIPSPSHTYTLDFGDPLRKHQMVCRYRNKLHVSWSAITTPSGVFVICMLVG 1047
Score = 197 bits (425), Expect = 7e-049
Identities = 97/165 (58%), Positives = 105/165 (63%)
Frame = +3 / -2
Query: 3 PTSIHMTKTPDGVEIADXGT*GXXLYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMT 182
PTSIH+TKTPDGV IAD T* LYL TI*CFLNGSPKS++ +CD EG RGTSD Y+T
Sbjct: 1046 PTSIHITKTPDGVVIADHET*SLFLYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYIT 867
Query: 183 RGFEMFVTS*TFTTNX*LPASCLXXFXTNDSTSNAPXXXPAXAAXRSSXXXSXXXXA**T 362
RGFE FVTS*T TTN LPA+CL F T+DSTSNAP PA AA RSS S *T
Sbjct: 866 RGFEWFVTS*TLTTNSWLPANCLNKFSTSDSTSNAPPRYPAVAATRSSTAVSFGRSTR*T 687
Query: 363 GXXXTTXX*FDMSRXXRVXXXXPDAXDLXXXXXXSSXXXXSXXSM 497
G TT *FD+SR V P A L SS S SM
Sbjct: 686 GNVKTTPK*FDISRNGLVRTAFPVALALKMFSLSSSPDMTSRPSM 552
Score = 154 bits (331), Expect = 7e-036
Identities = 82/170 (48%), Positives = 92/170 (54%)
Frame = +2 / -1
Query: 5 HXHTYDKDTRWGRNCRXXDMRLXSVSAXHMMLSEWITKI*HADVR**GXXKRNF*XIHDK 184
H HTY+KD W NCR +M+L SVSA H+MLS+WITKI V *G KRN IH K
Sbjct: 1044 HQHTYNKDP*WCSNCRP*NMKLVSVSANHLMLSQWITKIQRIGV*W*GNTKRNLRSIHHK 865
Query: 185 RVRNVCDIINIYHQXLIAS*LPXXIXX**FYIKCSPXXSCXXSXTILLXXIXXXXXMIDR 364
RV VCDIINI HQ L+ S*L I ** +IKCS SC S TIL I +DR
Sbjct: 864 RV*VVCDIINIDHQFLVTS*LSQQIFY**LHIKCSSKVSCSSSNTILHRGIIWEIDEVDR 685
Query: 365 XXXYDTXVIRHEPXXSSXXXXPRCSXPQXXXXXLLAXXXVXXXDVXXXLL 514
+T VIRH+P P PQ LLA V DV LL
Sbjct: 684 KRQDNTQVIRHQPERPREDGLPCRPRPQDVLPVLLAGHDVEALDVGDGLL 535
Score = 147 bits (315), Expect = 1e-033
Identities = 80/165 (48%), Positives = 85/165 (51%)
Frame = -3 / +2
Query: 498 TSXXXTXXXARXXXXXX*GXEHRGXXXSLXXXGSCRITXVSXXXFLSIMXIXXXMXXRRI 319
TS T AR *G +G S G CRIT V FLS I + RI
Sbjct: 551 TSRASTSCPARRTGRTS*GRGRQGRPSSRGRSG*CRITWVLS*RFLSTSSISQMIPRWRI 730
Query: 318 VXLXXQDXXGEHLM*NH*XKXXXGS*LAIXNWW*MFMMSQTFRTLLSCXXQKFLLXXPHH 139
V L QD EHLM +H* K S*L NWW MFMMSQT +TLL C +FLL PHH
Sbjct: 731 VLLLLQDTLEEHLMWSH**KIC*DS*LVTRNWWSMFMMSQTTQTLL*CMDLRFLLVFPHH 910
Query: 138 RTSAC*ILVIHSESIIWXADTXXSLMSXXLQFLPHLVSLSYVCXW 4
T ILVIH ESI W ADT S M LQ L H SL YVC W
Sbjct: 911 HTPIRWILVIH*ESIRWFADTETSFMFHGLQLLHHQGSLLYVCWW 1045
Score = 143 bits (307), Expect = 1e-032
Identities = 76/170 (44%), Positives = 83/170 (48%)
Frame = -1 / +3
Query: 512 GXXXXHRXXXXXXXRGXXXXXXEVXSIGXXXXHSXXXAHVESPXCRXXXSCLSCXSXX*X 333
G HR RG E H A VES C SCL S *
Sbjct: 537 GDHLLHRGPRRHVRRGGQGEHLEGEGDREGRPHEAVPADVESLGCCLDVSCLPRRSPK*Y 716
Query: 332 XXGGSXXCXXRXXXGSI*CRIISXKXXXAASWQSXIGGKCL*CHKHFEPSCHVXIRSSSX 153
GGS C R SI*C + S K SW IGG+CL*CHK +PSC V I SS
Sbjct: 717 RGGGSCCCYCRIPWRSI*CGVTSRKFVETVSW*PGIGGQCL*CHKPLKPSCDVWI*GSSW 896
Query: 152 XPLIIAHLHARFW*SIQKASYGXQIQXXASCPXVCNFYPIWCLCHMYAXG 3
L I HL+ FW*SI+KAS G QIQ ASC VCN+Y I LC+MYA G
Sbjct: 897 YSLTITHLYVGFW*SIEKASDGLQIQKQASCFMVCNYYTIRGLCYMYAGG 1046
Score = 137 bits (293), Expect = 1e-030
Identities = 69/132 (52%), Positives = 74/132 (56%)
Frame = +1 / -3
Query: 1 TPXAYI*QRHQMG*KLQTXGHEAXXCICXPYDAF*MDHQNLACRCAMMRGXQEELLXXT* 180
+P AYI*QR M * LQT HEA CIC P DAF MDHQN RC M+R QEE T
Sbjct: 1048 SPPAYI*QRPLMV**LQTMKHEACFCICKPSDAFSMDHQNPTYRCVMVREYQEEPQIHTS 869
Query: 181 QEGSKCL*HHKHLPPIXDCQLAAXXXFXLMILHQMLPXXILXXQXXDPPXXHXXXDXHDR 360
QEG L*HHKH PPI QL F L+ HQML IL Q DPP + D R
Sbjct: 868 QEGLSGL*HHKH*PPIPGYQLTVSTNFLLVTPHQMLLQGILQ*QQHDPPPRYHLGDRRGR 689
Query: 361 QEXXXRHXGDST 396
QE +H DST
Sbjct: 688 QETSRQHPSDST 653
>gb|AACV01007799.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007799, whole
genome shotgun sequence
Length = 57179
Score = 130 bits (279), Expect(3) = 1e-043
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / +2
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 51200 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 51379
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 51380 PLRKHQMVCR 51409
Score = 123 bits (264), Expect(3) = 9e-036
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / -3
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 51414 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 51235
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 51234 KFSTSDSTSNAP 51199
Score = 85.4 bits (180), Expect(2) = 6e-022
Identities = 42/73 (57%), Positives = 45/73 (61%)
Frame = -3 / +3
Query: 300 DXXGEHLM*NH*XKXXXGS*LAIXNWW*MFMMSQTFRTLLSCXXQKFLLXXPHHRTSAC* 121
D EHLM +H* K S*L NWW MFMMSQT +TLL C +FLL PHH T
Sbjct: 51189 DTLEEHLMWSH**KIC*DS*LVTRNWWSMFMMSQTTQTLL*CMDLRFLLVFPHHHTPIRW 51368
Query: 120 ILVIHSESIIWXA 82
ILVIH ESI W A
Sbjct: 51369 ILVIH*ESIRWFA 51407
Score = 53.3 bits (110), Expect(3) = 1e-043
Identities = 26/57 (45%), Positives = 29/57 (50%)
Frame = -2 / +1
Query: 469 EEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYHAXXXXDXXXEDRXAAXAG 299
+E LR+ A+G TR RLMSNH VV PVY D EDR AA AG
Sbjct: 50719 QEDRENILRARATGKAVLTRPFRLMSNHLGVVLTFPVYLVDLPNDTAVEDRVAATAG 50889
Score = 49.6 bits (102), Expect(3) = 1e-043
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR HV SAI+TPSGVFVICMLVG
Sbjct: 51498 RYRNKLHVSWSAITTPSGVFVICMLVG 51578
Score = 46.4 bits (95), Expect(3) = 9e-036
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3 / -2
Query: 3 PTSIHMTKTPDGVEIADXGT*GXXLYL 83
PTSIH+TKTPDGV IAD T* LYL
Sbjct: 51577 PTSIHITKTPDGVVIADHET*SLFLYL 51497
Score = 42.3 bits (86), Expect(2) = 6e-022
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +2
Query: 83 QIQXXASCPXVCNFYPIWCLCHMYAXG 3
QIQ ASC VCN+Y I LC+MYA G
Sbjct: 51497 QIQKQASCFMVCNYYTIRGLCYMYAGG 51577
Score = 36.3 bits (73), Expect(3) = 9e-036
Identities = 22/49 (44%), Positives = 23/49 (46%)
Frame = +3 / -1
Query: 300 PAXAAXRSSXXXSXXXXA**TGXXXTTXX*FDMSRXXRVXXXXPDAXDL 446
PA AA RSS S *TG TT *FD+SR V P A L
Sbjct: 50888 PAVAATRSSTAVSFGRSTR*TGNVKTTPK*FDISRNGLVRTAFPVALAL 50742
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
sequence
Length = 147344
Score = 130 bits (279), Expect(3) = 6e-043
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / +1
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 66100 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 66279
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 66280 PLRKHQMVCR 66309
Score = 123 bits (264), Expect(3) = 6e-035
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / -1
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 66314 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 66135
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 66134 KFSTSDSTSNAP 66099
Score = 85.4 bits (180), Expect(2) = 5e-022
Identities = 42/73 (57%), Positives = 45/73 (61%)
Frame = -3 / +2
Query: 300 DXXGEHLM*NH*XKXXXGS*LAIXNWW*MFMMSQTFRTLLSCXXQKFLLXXPHHRTSAC* 121
D EHLM +H* K S*L NWW MFMMSQT +TLL C +FLL PHH T
Sbjct: 66089 DTLEEHLMWSH**KIC*DS*LVTRNWWSMFMMSQTTQTLL*CMDLRFLLVFPHHHTPIRW 66268
Query: 120 ILVIHSESIIWXA 82
ILVIH ESI W A
Sbjct: 66269 ILVIH*ESIRWFA 66307
Score = 53.3 bits (110), Expect(3) = 6e-043
Identities = 26/57 (45%), Positives = 29/57 (50%)
Frame = -2 / +3
Query: 469 EEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYHAXXXXDXXXEDRXAAXAG 299
+E LR+ A+G TR RLMSNH VV PVY D EDR AA AG
Sbjct: 65619 QEDRENILRARATGKAVLTRPFRLMSNHLGVVLTFPVYLVDLPNDTAVEDRVAATAG 65789
Score = 49.6 bits (102), Expect(3) = 6e-043
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / +2
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR HV SAI+TPSGVFVICMLVG
Sbjct: 66398 RYRNKLHVSWSAITTPSGVFVICMLVG 66478
Score = 46.4 bits (95), Expect(3) = 6e-035
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3 / -3
Query: 3 PTSIHMTKTPDGVEIADXGT*GXXLYL 83
PTSIH+TKTPDGV IAD T* LYL
Sbjct: 66477 PTSIHITKTPDGVVIADHET*SLFLYL 66397
Score = 42.3 bits (86), Expect(2) = 5e-022
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +1
Query: 83 QIQXXASCPXVCNFYPIWCLCHMYAXG 3
QIQ ASC VCN+Y I LC+MYA G
Sbjct: 66397 QIQKQASCFMVCNYYTIRGLCYMYAGG 66477
Score = 36.3 bits (73), Expect(3) = 6e-035
Identities = 22/49 (44%), Positives = 23/49 (46%)
Frame = +3 / -2
Query: 300 PAXAAXRSSXXXSXXXXA**TGXXXTTXX*FDMSRXXRVXXXXPDAXDL 446
PA AA RSS S *TG TT *FD+SR V P A L
Sbjct: 65788 PAVAATRSSTAVSFGRSTR*TGNVKTTPK*FDISRNGLVRTAFPVALAL 65642
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 130 bits (279), Expect(3) = 4e-040
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / +3
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 2064186 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 2064365
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 2064366 PLRKHQMVCR 2064395
Score = 123 bits (264), Expect(2) = 1e-034
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / -3
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 2064400 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 2064221
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 2064220 KFSTSDSTSNAP 2064185
Score = 85.4 bits (180), Expect(2) = 5e-022
Identities = 42/73 (57%), Positives = 45/73 (61%)
Frame = -3 / +1
Query: 300 DXXGEHLM*NH*XKXXXGS*LAIXNWW*MFMMSQTFRTLLSCXXQKFLLXXPHHRTSAC* 121
D EHLM +H* K S*L NWW MFMMSQT +TLL C +FLL PHH T
Sbjct: 2064175 DTLEEHLMWSH**KIC*DS*LVTRNWWSMFMMSQTTQTLL*CMDLRFLLVFPHHHTPIRW 2064354
Query: 120 ILVIHSESIIWXA 82
ILVIH ESI W A
Sbjct: 2064355 ILVIH*ESIRWFA 2064393
Score = 53.3 bits (110), Expect(3) = 4e-040
Identities = 26/57 (45%), Positives = 29/57 (50%)
Frame = -2 / +2
Query: 469 EEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYHAXXXXDXXXEDRXAAXAG 299
+E LR+ A+G TR RLMSNH VV PVY D EDR AA AG
Sbjct: 2063705 QEDRENILRARATGKAVLTRPFRLMSNHLGVVLTFPVYLVDLPNDTAVEDRVAATAG 2063875
Score = 49.6 bits (102), Expect(3) = 4e-040
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / +1
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR HV SAI+TPSGVFVICMLVG
Sbjct: 2064484 RYRNKLHVSWSAITTPSGVFVICMLVG 2064564
Score = 46.4 bits (95), Expect(2) = 1e-034
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3 / -2
Query: 3 PTSIHMTKTPDGVEIADXGT*GXXLYL 83
PTSIH+TKTPDGV IAD T* LYL
Sbjct: 2064563 PTSIHITKTPDGVVIADHET*SLFLYL 2064483
Score = 42.3 bits (86), Expect(2) = 5e-022
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 83 QIQXXASCPXVCNFYPIWCLCHMYAXG 3
QIQ ASC VCN+Y I LC+MYA G
Sbjct: 2064483 QIQKQASCFMVCNYYTIRGLCYMYAGG 2064563
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 130 bits (279), Expect(3) = 2e-039
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / +1
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 2548981 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 2549160
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 2549161 PLRKHQMVCR 2549190
Score = 123 bits (264), Expect(2) = 1e-034
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / -2
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 2549195 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 2549016
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 2549015 KFSTSDSTSNAP 2548980
Score = 85.4 bits (180), Expect(2) = 5e-022
Identities = 42/73 (57%), Positives = 45/73 (61%)
Frame = -3 / +2
Query: 300 DXXGEHLM*NH*XKXXXGS*LAIXNWW*MFMMSQTFRTLLSCXXQKFLLXXPHHRTSAC* 121
D EHLM +H* K S*L NWW MFMMSQT +TLL C +FLL PHH T
Sbjct: 2548970 DTLEEHLMWSH**KIC*DS*LVTRNWWSMFMMSQTTQTLL*CMDLRFLLVFPHHHTPIRW 2549149
Query: 120 ILVIHSESIIWXA 82
ILVIH ESI W A
Sbjct: 2549150 ILVIH*ESIRWFA 2549188
Score = 53.3 bits (110), Expect(3) = 2e-039
Identities = 26/57 (45%), Positives = 29/57 (50%)
Frame = -2 / +3
Query: 469 EEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYHAXXXXDXXXEDRXAAXAG 299
+E LR+ A+G TR RLMSNH VV PVY D EDR AA AG
Sbjct: 2548500 QEDRENILRARATGKAVLTRPFRLMSNHLGVVLTFPVYLVDLPNDTAVEDRVAATAG 2548670
Score = 49.6 bits (102), Expect(3) = 2e-039
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / +2
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR HV SAI+TPSGVFVICMLVG
Sbjct: 2549279 RYRNKLHVSWSAITTPSGVFVICMLVG 2549359
Score = 46.4 bits (95), Expect(2) = 1e-034
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3 / -1
Query: 3 PTSIHMTKTPDGVEIADXGT*GXXLYL 83
PTSIH+TKTPDGV IAD T* LYL
Sbjct: 2549358 PTSIHITKTPDGVVIADHET*SLFLYL 2549278
Score = 42.3 bits (86), Expect(2) = 5e-022
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +1
Query: 83 QIQXXASCPXVCNFYPIWCLCHMYAXG 3
QIQ ASC VCN+Y I LC+MYA G
Sbjct: 2549278 QIQKQASCFMVCNYYTIRGLCYMYAGG 2549358
>ref|XM_467688.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2955
Score = 129 bits (277), Expect(2) = 2e-034
Identities = 59/115 (51%), Positives = 65/115 (56%)
Frame = -2 / +1
Query: 400 LMSNHXXVVXXXPVYHAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLV 221
L SNH VV VY D E+R A AG GAFDVESLV N +LAGNQ +V
Sbjct: 568 LGSNHLGVVLTFAVYRPGLAADASVEERVEATAGYLGGAFDVESLVENLLSKLAGNQDIV 747
Query: 220 VNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGDPFRKHHMVCRYRXXPHVP 56
VNVYDVTN S P+ MY + P S H+ LDFGDPFR H M CR R P
Sbjct: 748 VNVYDVTNASEPMAMYGPQSPDGKVSLFHVSTLDFGDPFRAHEMRCRSRYRQKPP 912
Score = 86.3 bits (182), Expect(2) = 1e-021
Identities = 51/109 (46%), Positives = 55/109 (50%)
Frame = +3 / -2
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
L L I C L GSPKSS+ + G YM G E FVTS TFTT *LPAS L
Sbjct: 893 LLLHLISCALKGSPKSSVLTWKRDTLPSGL*GPYMAIGSEAFVTSYTFTTIS*LPASLLS 714
Query: 255 XFXTNDSTSNAPXXXPAXAAXRSSXXXSXXXXA**TGXXXTTXX*FDMS 401
F T+DSTS AP PA A+ RSS S T TT FD S
Sbjct: 713 KFSTSDSTSKAPPRYPAVASTRSSTDASAARPGRYTAKVRTTPKWFDPS 567
Score = 40.5 bits (82), Expect(2) = 1e-021
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3 / -2
Query: 3 PTSIHMTKTPDGVEIADXGT*GXXLYL 83
PTSIH+TK P G+ IAD G G LYL
Sbjct: 971 PTSIHITKVPKGLVIADHGRGGFCLYL 891
Score = 40.0 bits (81), Expect(2) = 2e-034
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / +1
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR P +P SAI+ P G FVI MLVG
Sbjct: 892 RYRQKPPLPWSAITNPLGTFVIWMLVG 972
>gb|AQ160958.1|AQ160958 nbxb0006A20r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0006A20r, DNA sequence
Length = 636
Score = 130 bits (279), Expect = 1e-028
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / -3
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 352 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 173
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 172 PLRKHQMVCR 143
Score = 123 bits (264), Expect = 1e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / +3
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 138 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 317
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 318 KFSTSDSTSNAP 353
>gb|AQ259758.1|AQ259758 nbxb0023D16r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0023D16r, DNA sequence
Length = 713
Score = 130 bits (279), Expect = 1e-028
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / -1
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 308 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 129
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 128 PLRKHQMVCR 99
Score = 123 bits (264), Expect = 1e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / +1
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 94 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 273
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 274 KFSTSDSTSNAP 309
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 130 bits (279), Expect = 1e-028
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / +1
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 29815144 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 29815323
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 29815324 PLRKHQMVCR 29815353
Score = 123 bits (264), Expect = 1e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / -3
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 29815358 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 29815179
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 29815178 KFSTSDSTSNAP 29815143
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 130 bits (279), Expect = 1e-028
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / +1
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 28850443 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 28850622
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 28850623 PLRKHQMVCR 28850652
Score = 123 bits (264), Expect = 1e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / -3
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 28850657 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 28850478
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 28850477 KFSTSDSTSNAP 28850442
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 130 bits (279), Expect = 1e-028
Identities = 56/70 (80%), Positives = 56/70 (80%)
Frame = -2 / +3
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N RQLAGNQ LVVNVYDVTN SNPLVMY SEVPL PS SH LDFGD
Sbjct: 28759119 GAFDVESLVENLLRQLAGNQELVVNVYDVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGD 28759298
Query: 109 PFRKHHMVCR 80
P RKH MVCR
Sbjct: 28759299 PLRKHQMVCR 28759328
Score = 123 bits (264), Expect = 1e-026
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3 / -2
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVTS*T TTN LPA+CL
Sbjct: 28759333 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTS*TLTTNSWLPANCLN 28759154
Query: 255 XFXTNDSTSNAP 290
F T+DSTSNAP
Sbjct: 28759153 KFSTSDSTSNAP 28759118
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 102 bits (217), Expect(2) = 2e-026
Identities = 43/70 (61%), Positives = 48/70 (68%)
Frame = -2 / +1
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N +LAGNQ +VVNVYDVTN S P+ MY + P S H+ LDFGD
Sbjct: 6009184 GAFDVESLVENLLSKLAGNQDIVVNVYDVTNASEPMAMYGPQSPDGKVSLFHVSTLDFGD 6009363
Query: 109 PFRKHHMVCR 80
PFR H M CR
Sbjct: 6009364 PFRAHEMRCR 6009393
Score = 40.0 bits (81), Expect(2) = 2e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / +1
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR P +P SAI+ P G FVI MLVG
Sbjct: 6009472 RYRQKPPLPWSAITNPLGTFVIWMLVG 6009552
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0684F11
Length = 147731
Score = 102 bits (217), Expect(2) = 2e-026
Identities = 43/70 (61%), Positives = 48/70 (68%)
Frame = -2 / +3
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N +LAGNQ +VVNVYDVTN S P+ MY + P S H+ LDFGD
Sbjct: 27762 GAFDVESLVENLLSKLAGNQDIVVNVYDVTNASEPMAMYGPQSPDGKVSLFHVSTLDFGD 27941
Query: 109 PFRKHHMVCR 80
PFR H M CR
Sbjct: 27942 PFRAHEMRCR 27971
Score = 40.0 bits (81), Expect(2) = 2e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / +3
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR P +P SAI+ P G FVI MLVG
Sbjct: 28050 RYRQKPPLPWSAITNPLGTFVIWMLVG 28130
>gb|AACV01005368.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005368,
whole genome shotgun sequence
Length = 22440
Score = 102 bits (217), Expect(2) = 2e-026
Identities = 43/70 (61%), Positives = 48/70 (68%)
Frame = -2 / -2
Query: 289 GAFDVESLVXNXXRQLAGNQXLVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGD 110
GAFDVESLV N +LAGNQ +VVNVYDVTN S P+ MY + P S H+ LDFGD
Sbjct: 677 GAFDVESLVENLLSKLAGNQDIVVNVYDVTNASEPMAMYGPQSPDGKVSLFHVSTLDFGD 498
Query: 109 PFRKHHMVCR 80
PFR H M CR
Sbjct: 497 PFRAHEMRCR 468
Score = 40.0 bits (81), Expect(2) = 2e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR P +P SAI+ P G FVI MLVG
Sbjct: 389 RYRQKPPLPWSAITNPLGTFVIWMLVG 309
>gb|AQ272632.1|AQ272632 nbxb0028G04r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0028G04r, DNA sequence
Length = 618
Score = 91.3 bits (193), Expect(2) = 6e-025
Identities = 41/72 (56%), Positives = 49/72 (68%)
Frame = +3 / +2
Query: 75 LYLXTI*CFLNGSPKSSMQMCDDEGXXRGTSDXYMTRGFEMFVTS*TFTTNX*LPASCLX 254
+YL TI*CFLNGSPKS++ +CD EG RGTSD Y+TRGFE FVT *T T+ + +
Sbjct: 308 IYLQTI*CFLNGSPKSNV*VCDGEGIPRGTSDPYITRGFEWFVTQ*TLDTSPGYQLTGIT 487
Query: 255 XFXTNDSTSNAP 290
DS SNAP
Sbjct: 488 NVILADSPSNAP 523
Score = 87.2 bits (184), Expect(2) = 1e-024
Identities = 37/49 (75%), Positives = 37/49 (75%)
Frame = -2 / -1
Query: 226 LVVNVYDVTNISNPLVMYXSEVPLXXPSSSHICMLDFGDPFRKHHMVCR 80
LV NVY VTN SNPLVMY SEVPL PS SH LDFGDP RKH MVCR
Sbjct: 459 LVSNVYCVTNHSNPLVMYGSEVPLGIPSPSHTYTLDFGDPLRKHQMVCR 313
Score = 49.6 bits (102), Expect(2) = 1e-024
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2 / -2
Query: 82 RYRXXPHVPXSAISTPSGVFVICMLVG 2
RYR HV SAI+TPSGVFVICMLVG
Sbjct: 224 RYRNKLHVSWSAITTPSGVFVICMLVG 144
Score = 46.4 bits (95), Expect(2) = 6e-025
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 3 PTSIHMTKTPDGVEIADXGT*GXXLYL 83
PTSIH+TKTPDGV IAD T* LYL
Sbjct: 145 PTSIHITKTPDGVVIADHET*SLFLYL 225
>dbj|AK121000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K19, full
insert sequence
Length = 4802
Score = 70.3 bits (147), Expect(2) = 1e-022
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = -2 / +2
Query: 400 LMSNHXXVVXXXPVYHAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLV 221
L SNH VV VY D E+R A G +FDV SLV QLA Q +V
Sbjct: 1784 LKSNHLGVVLTFTVYKYDLPPDATPEERIEATLGYLGASFDVPSLVERLLEQLASKQKIV 1963
Query: 220 VNVYDVTNISNPLVMYXSEV 161
V +YD+TN + P MY S+V
Sbjct: 1964 VRLYDITNHTYPTKMYDSDV 2023
Score = 59.7 bits (124), Expect(2) = 1e-022
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -2 / +2
Query: 136 HICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
HI +DFGDP RKH M CR++ P +P SAI S V +I +LVG
Sbjct: 2042 HISNIDFGDPTRKHVMHCRFKHAPSLPWSAIMISSAVAIIVLLVG 2176
>ref|NM_196042.1| Oryza sativa (japonica cultivar-group) putative histidine kinase
(OSJNBa0073L01.1), mRNA
Length = 3161
Score = 70.3 bits (147), Expect(2) = 1e-022
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = -2 / +1
Query: 400 LMSNHXXVVXXXPVYHAXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLV 221
L SNH VV VY D E+R A G +FDV SLV QLA Q +V
Sbjct: 514 LKSNHLGVVLTFTVYKYDLPPDATPEERIEATLGYLGASFDVPSLVERLLEQLASKQKIV 693
Query: 220 VNVYDVTNISNPLVMYXSEV 161
V +YD+TN + P MY S+V
Sbjct: 694 VRLYDITNHTYPTKMYDSDV 753
Score = 59.7 bits (124), Expect(2) = 1e-022
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -2 / +1
Query: 136 HICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
HI +DFGDP RKH M CR++ P +P SAI S V +I +LVG
Sbjct: 772 HISNIDFGDPTRKHVMHCRFKHAPSLPWSAIMISSAVAIIVLLVG 906
>dbj|AK121135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077D19, full
insert sequence
Length = 4044
Score = 70.7 bits (148), Expect(2) = 4e-021
Identities = 34/114 (29%), Positives = 50/114 (43%)
Frame = -2 / +3
Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYH 353
AP + Q+ + D E LR+ SG T +L++N V+ VY
Sbjct: 1104 APVIFAQDAYKHVISFDMLSGNEDRDNILRARKSGKGVLTAPFKLLNNRLGVILTYTVYK 1283
Query: 352 AXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNIS 191
+R A G G FD+++LV +QLA + ++VNVYD TN S
Sbjct: 1284 YELPAYARPHERIQAAIGYLGGIFDIQALVEKLLKQLASQESIMVNVYDTTNES 1445
Score = 54.2 bits (112), Expect(2) = 4e-021
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = -2 / +3
Query: 136 HICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
H+ +L+FGDP RKH M CR+ P P AI++ G VI +L G
Sbjct: 1488 HVSVLNFGDPSRKHEMHCRFEKKPPWPWLAITSSFGTLVIALLTG 1622
>ref|XM_463649.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3072
Score = 70.7 bits (148), Expect(2) = 4e-021
Identities = 34/114 (29%), Positives = 50/114 (43%)
Frame = -2 / +1
Query: 532 APXVXXQEXXXXIXXXDXXXXEEXXXXXLRSXASGXXXXTRXXRLMSNHXXVVXXXPVYH 353
AP + Q+ + D E LR+ SG T +L++N V+ VY
Sbjct: 697 APVIFAQDAYKHVISFDMLSGNEDRDNILRARKSGKGVLTAPFKLLNNRLGVILTYTVYK 876
Query: 352 AXXXXDXXXEDRXAAXAGXXXGAFDVESLVXNXXRQLAGNQXLVVNVYDVTNIS 191
+R A G G FD+++LV +QLA + ++VNVYD TN S
Sbjct: 877 YELPAYARPHERIQAAIGYLGGIFDIQALVEKLLKQLASQESIMVNVYDTTNES 1038
Score = 54.2 bits (112), Expect(2) = 4e-021
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = -2 / +1
Query: 136 HICMLDFGDPFRKHHMVCRYRXXPHVPXSAISTPSGVFVICMLVG 2
H+ +L+FGDP RKH M CR+ P P AI++ G VI +L G
Sbjct: 1081 HVSVLNFGDPSRKHEMHCRFEKKPPWPWLAITSSFGTLVIALLTG 1215
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,069,521,857
Number of Sequences: 438736
Number of extensions: 21560845
Number of successful extensions: 62596
Number of sequences better than 1.0e-020: 24
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 115319380359
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)