TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF31c07.yg.2.1
(352 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_188637.1| Oryza sativa (japonica cultivar-group), Oz... 112 3e-042
gb|CB669698.1|CB669698 OSJNEe02G06.f OSJNEe Oryza sativa (j... 112 2e-040
gb|AU091748.1|AU091748 AU091748 Rice callus Oryza sativa (j... 112 9e-038
gb|AACV01000520.1| Oryza sativa (japonica cultivar-group) c... 112 9e-037
dbj|AP002481.1| Oryza sativa (japonica cultivar-group) geno... 112 8e-036
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 112 5e-034
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 112 6e-034
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 112 2e-033
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 112 2e-033
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 112 2e-033
dbj|AK060522.1| Oryza sativa (japonica cultivar-group) cDNA... 82 1e-031
gb|CB669080.1|CB669080 OSJNEe01E24.f OSJNEe Oryza sativa (j... 112 4e-030
gb|AACV01008784.1| Oryza sativa (japonica cultivar-group) c... 82 4e-025
gb|CH401185.1| Oryza sativa (japonica cultivar-group) chrom... 82 1e-023
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 82 2e-022
gb|AU091600.1|AU091600 AU091600 Rice callus Oryza sativa (j... 98 2e-020
>ref|NM_188637.1| Oryza sativa (japonica cultivar-group), Ozsa8240 predicted mRNA
Length = 1671
Score = 112 bits (240), Expect(2) = 3e-042
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / +1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 418 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 567
Score = 108 bits (231), Expect(2) = 1e-034
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / -2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 563 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 417
Score = 81.7 bits (172), Expect(2) = 3e-042
Identities = 37/61 (60%), Positives = 37/61 (60%)
Frame = +1 / +1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET AG FYKP YEL Q LNMEM IIM RDA MD I TD I RE
Sbjct: 619 SRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMARDAGMDWIIHLDTDELIHPAGARE 798
Query: 331 Y 333
Y
Sbjct: 799 Y 801
Score = 80.3 bits (169), Expect(2) = 1e-025
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / -1
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 564 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 418
Score = 77.6 bits (163), Expect(2) = 1e-022
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / +2
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 416 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 565
Score = 76.2 bits (160), Expect(2) = 6e-021
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 417 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 566
Score = 60.6 bits (126), Expect(2) = 1e-034
Identities = 33/61 (54%), Positives = 35/61 (57%)
Frame = -3 / -2
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YSR SSV M S+ ASL I+ ISMF C SS* GL* PA QVSFQMR
Sbjct: 800 YSRAPAG*ISSSVSR*MIQSMPASLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMR 621
Query: 152 L 150
L
Sbjct: 620 L 618
Score = 58.8 bits (122), Expect(2) = 1e-025
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = -2 / -1
Query: 333 VLSXXXXXNXXISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNA 154
VL N I D +H+SIP HN+ HFHV L F+ VK TC SLIPNA
Sbjct: 801 VLPGTSWMN*LIGIKMNDPVHASIPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNA 622
Score = 51.9 bits (107), Expect(2) = 1e-014
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / -3
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 505 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 416
Score = 51.0 bits (105), Expect(2) = 1e-022
Identities = 27/60 (45%), Positives = 29/60 (48%)
Frame = +2 / +2
Query: 155 AFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXFXXXXXEST 334
AFGMRL QV FT+ I N + *TWK L GML W S I M F ST
Sbjct: 623 AFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQGMLAWTGSFILIPMS*FIQLVPGST 802
Score = 49.6 bits (102), Expect(2) = 1e-014
Identities = 25/59 (42%), Positives = 27/59 (45%)
Frame = -1 / -3
Query: 331 TLGXXXXEXXHQYXXX*XNPF*HPXX**XXFPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
T G E H+Y * +P HP ** FPC V N CK L KSHSKC
Sbjct: 799 TPGHQLDELAHRYQDE*SSPCQHPLP***PFPCSATV*QIVHNCTVCKRNLPAKSHSKC 623
Score = 46.9 bits (96), Expect(2) = 6e-021
Identities = 24/59 (40%), Positives = 27/59 (45%)
Frame = +3 / +3
Query: 156 HLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NGXXHXXXY**XXSXXXXPRV 332
HLE*DL R LQ L T +HGN +Y GC +G H Y * S P V
Sbjct: 624 HLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKGCWHGLDHSS*YR*ANSSSWCPGV 800
>gb|CB669698.1|CB669698 OSJNEe02G06.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02G06 5', mRNA sequence
Length = 772
Score = 112 bits (240), Expect(2) = 2e-040
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 413 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 562
Score = 108 bits (231), Expect(2) = 1e-033
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / -2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 558 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 412
Score = 80.3 bits (169), Expect(2) = 4e-025
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / -1
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 559 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 413
Score = 77.6 bits (163), Expect(2) = 4e-022
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / +3
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 411 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 560
Score = 76.2 bits (160), Expect(2) = 3e-020
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / +1
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 412 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 561
Score = 75.8 bits (159), Expect(2) = 2e-040
Identities = 34/53 (64%), Positives = 34/53 (64%)
Frame = +1 / +2
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXI 309
SRIWNET AG FYKP YEL Q LNMEM IIM RDA MD I TD I
Sbjct: 614 SRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMARDAGMDWIIHLDTDELI 772
Score = 57.4 bits (119), Expect(2) = 1e-033
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = -2 / -1
Query: 309 NXXISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNA 154
N I D +H+SIP HN+ HFHV L F+ VK TC SLIPNA
Sbjct: 772 N*LIGIKMNDPVHASIPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNA 617
Score = 57.0 bits (118), Expect(2) = 4e-025
Identities = 30/51 (58%), Positives = 32/51 (62%)
Frame = -3 / -2
Query: 302 SSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
SSV M S+ ASL I+ ISMF C SS* GL* PA QVSFQMRL
Sbjct: 765 SSVSR*MIQSMPASLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRL 613
Score = 51.9 bits (107), Expect(2) = 2e-013
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / -3
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 500 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 411
Score = 49.6 bits (102), Expect(2) = 4e-022
Identities = 24/49 (48%), Positives = 26/49 (53%)
Frame = +2 / +3
Query: 155 AFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILM 301
AFGMRL QV FT+ I N + *TWK L GML W S I M
Sbjct: 618 AFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQGMLAWTGSFILIPM 764
Score = 46.0 bits (94), Expect(2) = 2e-013
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = -1 / -3
Query: 301 HQYXXX*XNPF*HPXX**XXFPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
H+Y * +P HP ** FPC V N CK L KSHSKC
Sbjct: 764 HRYQDE*SSPCQHPLP***PFPCSATV*QIVHNCTVCKRNLPAKSHSKC 618
Score = 44.6 bits (91), Expect(2) = 3e-020
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +3 / +1
Query: 156 HLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*NGXXHXXXY 296
HLE*DL R LQ L T +HGN +Y GC +G H Y
Sbjct: 619 HLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKGCWHGLDHSS*Y 759
>gb|AU091748.1|AU091748 AU091748 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11808, mRNA sequence
Length = 639
Score = 112 bits (240), Expect(3) = 9e-038
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 107 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 256
Score = 108 bits (231), Expect(3) = 8e-032
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / -1
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 252 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 106
Score = 80.3 bits (169), Expect(3) = 9e-021
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / -3
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 253 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 107
Score = 77.6 bits (163), Expect(2) = 2e-019
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / +3
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 105 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 254
Score = 76.2 bits (160), Expect(2) = 6e-017
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / +1
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 106 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 255
Score = 62.0 bits (129), Expect(3) = 9e-038
Identities = 29/52 (55%), Positives = 29/52 (55%)
Frame = +1 / +3
Query: 178 AGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXREY 333
A FYKP YEL Q LNMEM IIM RDA MD I TD I REY
Sbjct: 336 ASFFYKPCNYELFVKQSLNMEMAIIMARDAGMDWIIHLDTDELIHPAGAREY 491
Score = 51.9 bits (107), Expect(2) = 2e-010
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / -2
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 194 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 105
Score = 46.9 bits (96), Expect(3) = 8e-032
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = -2 / -2
Query: 333 VLSXXXXXNXXISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTC 178
VL N I D +H+SIP HN+ HFHV L F+ VK TC
Sbjct: 491 VLPGTSWMN*LIGIKMNDPVHASIPCHNDSHFHVQRLFDK*FIIARFVKETC 336
Score = 40.0 bits (81), Expect(2) = 2e-019
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = +2 / +1
Query: 170 LXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILMXXFXXXXXEST 334
L QV FT+ I N + *TWK L GML W S I M F ST
Sbjct: 328 LAGQVSFTNRAIMNYLSNSR*TWKWLSLWQGMLAWTGSFILIPMS*FIQLVPGST 492
Score = 39.1 bits (79), Expect(3) = 9e-021
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = -3 / -3
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL* 189
YSR SSV M S+ ASL I+ ISMF C SS* GL*
Sbjct: 490 YSRAPAG*ISSSVSR*MIQSMPASLAIMIAISMFSDCLTNSS*LHGL* 347
Score = 35.0 bits (70), Expect(2) = 2e-010
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -1 / -1
Query: 331 TLGXXXXEXXHQYXXX*XNPF*HPXX**XXFPCLXXAXXXVRNXXACKXXL 179
T G E H+Y * +P HP ** FPC V N CK L
Sbjct: 489 TPGHQLDELAHRYQDE*SSPCQHPLP***PFPCSATV*QIVHNCTVCKRNL 337
Score = 32.7 bits (65), Expect(2) = 6e-017
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +3 / +2
Query: 189 LQAXXLRTXXXAXXKHGNXXYYXXGC*NGXXHXXXY**XXSXXXXPRV 332
LQ L T +HGN +Y GC +G H Y * S P V
Sbjct: 347 LQTVQL*TICQTVAEHGNGYHYGKGCWHGLDHSS*YR*ANSSSWCPGV 490
Score = 21.2 bits (40), Expect(3) = 9e-038
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +2
Query: 151 SRIWNET 171
SRIWNET
Sbjct: 308 SRIWNET 328
Score = 20.3 bits (38), Expect(3) = 8e-032
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -1
Query: 173 QVSFQMRL 150
QVSFQMRL
Sbjct: 330 QVSFQMRL 307
Score = 18.9 bits (35), Expect(3) = 9e-021
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1 / -2
Query: 172 KSHSKC 155
KSHSKC
Sbjct: 329 KSHSKC 312
>gb|AACV01000520.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000520, whole
genome shotgun sequence
Length = 15554
Score = 112 bits (240), Expect(2) = 9e-037
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / -2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 9235 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 9086
Score = 108 bits (231), Expect(2) = 2e-030
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / +3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 9090 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 9236
Score = 80.3 bits (169), Expect(2) = 9e-022
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / +2
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 9089 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 9235
Score = 77.6 bits (163), Expect(2) = 2e-018
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / -3
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 9237 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 9088
Score = 76.2 bits (160), Expect(2) = 4e-017
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -1
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 9236 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 9087
Score = 68.4 bits (143), Expect(2) = 9e-037
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +1 / -1
Query: 142 NLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
N+FSRIWNET AG FYKP YEL Q LNMEM IIM R
Sbjct: 8552 NIFSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMAR 8433
Score = 51.9 bits (107), Expect(2) = 8e-009
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / +1
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 9148 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 9237
Score = 51.5 bits (106), Expect(2) = 2e-030
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / +3
Query: 270 SSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
SS P HN+ HFHV L F+ VK TC SLIPNA E
Sbjct: 8424 SSYPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNATE 8546
Score = 50.6 bits (104), Expect(2) = 9e-022
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / +1
Query: 263 SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRLNRF 141
+L I+ ISMF C SS* GL* PA QVSFQMRL F
Sbjct: 8431 TLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRLKMF 8553
Score = 41.8 bits (85), Expect(2) = 2e-018
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2 / -2
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+S AFGMRL QV FT+ I N + *TWK L G
Sbjct: 8548 FSVAFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQG 8432
Score = 39.1 bits (79), Expect(2) = 4e-017
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / -3
Query: 135 VLESIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
+L+ Q HLE*DL R LQ L T +HGN +Y G
Sbjct: 8559 LLKHFQSHLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKG 8431
Score = 35.0 bits (70), Expect(2) = 8e-009
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / +2
Query: 241 FPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
FPC V N CK L KSHSKC
Sbjct: 8453 FPCSATV*QIVHNCTVCKRNLPAKSHSKC 8539
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0702F03
Length = 141111
Score = 112 bits (240), Expect(2) = 8e-036
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / -3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 16345 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 16196
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / +3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 16200 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 16346
Score = 80.3 bits (169), Expect(2) = 8e-021
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / +2
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 16199 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 16345
Score = 77.6 bits (163), Expect(2) = 2e-017
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / -1
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 16347 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 16198
Score = 76.2 bits (160), Expect(2) = 3e-016
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 16346 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 16197
Score = 68.4 bits (143), Expect(2) = 8e-036
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +1 / -2
Query: 142 NLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
N+FSRIWNET AG FYKP YEL Q LNMEM IIM R
Sbjct: 15662 NIFSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMAR 15543
Score = 51.9 bits (107), Expect(2) = 7e-008
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / +1
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 16258 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 16347
Score = 51.9 bits (107), Expect(2) = 1e-029
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -2 / +3
Query: 273 HSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
+SS P HN+ HFHV L F+ VK TC SLIPNA E
Sbjct: 15531 NSSYPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNATE 15656
Score = 50.6 bits (104), Expect(2) = 8e-021
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / +1
Query: 263 SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRLNRF 141
+L I+ ISMF C SS* GL* PA QVSFQMRL F
Sbjct: 15541 TLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRLKMF 15663
Score = 41.8 bits (85), Expect(2) = 2e-017
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2 / -3
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+S AFGMRL QV FT+ I N + *TWK L G
Sbjct: 15658 FSVAFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQG 15542
Score = 39.1 bits (79), Expect(2) = 3e-016
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / -1
Query: 135 VLESIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
+L+ Q HLE*DL R LQ L T +HGN +Y G
Sbjct: 15669 LLKHFQSHLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKG 15541
Score = 35.0 bits (70), Expect(2) = 7e-008
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / +2
Query: 241 FPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
FPC V N CK L KSHSKC
Sbjct: 15563 FPCSATV*QIVHNCTVCKRNLPAKSHSKC 15649
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 112 bits (240), Expect(2) = 5e-034
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / -1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 7352939 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 7352790
Score = 108 bits (231), Expect(2) = 7e-028
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / +1
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 7352794 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 7352940
Score = 80.3 bits (169), Expect(2) = 5e-019
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / +3
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 7352793 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 7352939
Score = 77.6 bits (163), Expect(2) = 1e-015
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / -2
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 7352941 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 7352792
Score = 76.2 bits (160), Expect(2) = 2e-014
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 7352940 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 7352791
Score = 68.4 bits (143), Expect(2) = 5e-034
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +1 / -3
Query: 142 NLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
N+FSRIWNET AG FYKP YEL Q LNMEM IIM R
Sbjct: 7352256 NIFSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMAR 7352137
Score = 51.9 bits (107), Expect(2) = 3e-006
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / +2
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 7352852 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 7352941
Score = 51.9 bits (107), Expect(2) = 7e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -2 / +1
Query: 273 HSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
+SS P HN+ HFHV L F+ VK TC SLIPNA E
Sbjct: 7352125 NSSYPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNATE 7352250
Score = 50.6 bits (104), Expect(2) = 5e-019
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / +2
Query: 263 SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRLNRF 141
+L I+ ISMF C SS* GL* PA QVSFQMRL F
Sbjct: 7352135 TLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRLKMF 7352257
Score = 41.8 bits (85), Expect(2) = 1e-015
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2 / -1
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+S AFGMRL QV FT+ I N + *TWK L G
Sbjct: 7352252 FSVAFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQG 7352136
Score = 39.1 bits (79), Expect(2) = 2e-014
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / -2
Query: 135 VLESIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
+L+ Q HLE*DL R LQ L T +HGN +Y G
Sbjct: 7352263 LLKHFQSHLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKG 7352135
Score = 35.0 bits (70), Expect(2) = 3e-006
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / +3
Query: 241 FPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
FPC V N CK L KSHSKC
Sbjct: 7352157 FPCSATV*QIVHNCTVCKRNLPAKSHSKC 7352243
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 112 bits (240), Expect(2) = 6e-034
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / -3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 7432278 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 7432129
Score = 108 bits (231), Expect(2) = 1e-027
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / +2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 7432133 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 7432279
Score = 80.3 bits (169), Expect(2) = 5e-019
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / +1
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 7432132 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 7432278
Score = 77.6 bits (163), Expect(2) = 1e-015
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / -1
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 7432280 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 7432131
Score = 76.2 bits (160), Expect(2) = 2e-014
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 7432279 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 7432130
Score = 68.4 bits (143), Expect(2) = 6e-034
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +1 / -2
Query: 142 NLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
N+FSRIWNET AG FYKP YEL Q LNMEM IIM R
Sbjct: 7431595 NIFSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMAR 7431476
Score = 51.9 bits (107), Expect(2) = 4e-006
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / +3
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 7432191 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 7432280
Score = 51.5 bits (106), Expect(2) = 1e-027
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / +2
Query: 270 SSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
SS P HN+ HFHV L F+ VK TC SLIPNA E
Sbjct: 7431467 SSYPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNATE 7431589
Score = 50.6 bits (104), Expect(2) = 5e-019
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / +3
Query: 263 SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRLNRF 141
+L I+ ISMF C SS* GL* PA QVSFQMRL F
Sbjct: 7431474 TLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRLKMF 7431596
Score = 41.8 bits (85), Expect(2) = 1e-015
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2 / -3
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+S AFGMRL QV FT+ I N + *TWK L G
Sbjct: 7431591 FSVAFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQG 7431475
Score = 39.1 bits (79), Expect(2) = 2e-014
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / -1
Query: 135 VLESIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
+L+ Q HLE*DL R LQ L T +HGN +Y G
Sbjct: 7431602 LLKHFQSHLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKG 7431474
Score = 35.0 bits (70), Expect(2) = 4e-006
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / +1
Query: 241 FPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
FPC V N CK L KSHSKC
Sbjct: 7431496 FPCSATV*QIVHNCTVCKRNLPAKSHSKC 7431582
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 112 bits (240), Expect(2) = 2e-033
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / -1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 7432278 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 7432129
Score = 108 bits (231), Expect(2) = 4e-027
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / +2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 7432133 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 7432279
Score = 80.3 bits (169), Expect(2) = 2e-018
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / +1
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 7432132 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 7432278
Score = 77.6 bits (163), Expect(2) = 4e-015
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / -2
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 7432280 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 7432131
Score = 76.2 bits (160), Expect(2) = 7e-014
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 7432279 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 7432130
Score = 68.4 bits (143), Expect(2) = 2e-033
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +1 / -3
Query: 142 NLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
N+FSRIWNET AG FYKP YEL Q LNMEM IIM R
Sbjct: 7431595 NIFSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMAR 7431476
Score = 51.9 bits (107), Expect(2) = 1e-005
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / +3
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 7432191 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 7432280
Score = 51.5 bits (106), Expect(2) = 4e-027
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / +2
Query: 270 SSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
SS P HN+ HFHV L F+ VK TC SLIPNA E
Sbjct: 7431467 SSYPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNATE 7431589
Score = 50.6 bits (104), Expect(2) = 2e-018
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / +3
Query: 263 SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRLNRF 141
+L I+ ISMF C SS* GL* PA QVSFQMRL F
Sbjct: 7431474 TLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRLKMF 7431596
Score = 41.8 bits (85), Expect(2) = 4e-015
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2 / -1
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+S AFGMRL QV FT+ I N + *TWK L G
Sbjct: 7431591 FSVAFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQG 7431475
Score = 39.1 bits (79), Expect(2) = 7e-014
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / -2
Query: 135 VLESIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
+L+ Q HLE*DL R LQ L T +HGN +Y G
Sbjct: 7431602 LLKHFQSHLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKG 7431474
Score = 35.0 bits (70), Expect(2) = 1e-005
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / +1
Query: 241 FPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
FPC V N CK L KSHSKC
Sbjct: 7431496 FPCSATV*QIVHNCTVCKRNLPAKSHSKC 7431582
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 112 bits (240), Expect(2) = 2e-033
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / -3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 7355317 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 7355168
Score = 108 bits (231), Expect(2) = 3e-027
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / +3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 7355172 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 7355318
Score = 80.3 bits (169), Expect(2) = 2e-018
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / +2
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 7355171 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 7355317
Score = 77.6 bits (163), Expect(2) = 4e-015
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / -1
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 7355319 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 7355170
Score = 76.2 bits (160), Expect(2) = 7e-014
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -2
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 7355318 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 7355169
Score = 68.4 bits (143), Expect(2) = 2e-033
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +1 / -2
Query: 142 NLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
N+FSRIWNET AG FYKP YEL Q LNMEM IIM R
Sbjct: 7354634 NIFSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMAR 7354515
Score = 51.9 bits (107), Expect(2) = 1e-005
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / +1
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 7355230 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 7355319
Score = 51.9 bits (107), Expect(2) = 3e-027
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -2 / +3
Query: 273 HSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
+SS P HN+ HFHV L F+ VK TC SLIPNA E
Sbjct: 7354503 NSSYPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNATE 7354628
Score = 50.6 bits (104), Expect(2) = 2e-018
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / +1
Query: 263 SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRLNRF 141
+L I+ ISMF C SS* GL* PA QVSFQMRL F
Sbjct: 7354513 TLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRLKMF 7354635
Score = 41.8 bits (85), Expect(2) = 4e-015
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2 / -3
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+S AFGMRL QV FT+ I N + *TWK L G
Sbjct: 7354630 FSVAFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQG 7354514
Score = 39.1 bits (79), Expect(2) = 7e-014
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / -1
Query: 135 VLESIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
+L+ Q HLE*DL R LQ L T +HGN +Y G
Sbjct: 7354641 LLKHFQSHLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKG 7354513
Score = 35.0 bits (70), Expect(2) = 1e-005
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / +2
Query: 241 FPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
FPC V N CK L KSHSKC
Sbjct: 7354535 FPCSATV*QIVHNCTVCKRNLPAKSHSKC 7354621
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 112 bits (240), Expect(2) = 2e-033
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / -1
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 7353099 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 7352950
Score = 108 bits (231), Expect(2) = 3e-027
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / +2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 7352954 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 7353100
Score = 80.3 bits (169), Expect(2) = 2e-018
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / +1
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 7352953 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 7353099
Score = 77.6 bits (163), Expect(2) = 4e-015
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / -2
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 7353101 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 7352952
Score = 76.2 bits (160), Expect(2) = 7e-014
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / -3
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 7353100 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 7352951
Score = 68.4 bits (143), Expect(2) = 2e-033
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +1 / -3
Query: 142 NLFSRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
N+FSRIWNET AG FYKP YEL Q LNMEM IIM R
Sbjct: 7352416 NIFSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIIMAR 7352297
Score = 51.9 bits (107), Expect(2) = 1e-005
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / +3
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 7353012 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 7353101
Score = 51.9 bits (107), Expect(2) = 3e-027
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -2 / +2
Query: 273 HSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
+SS P HN+ HFHV L F+ VK TC SLIPNA E
Sbjct: 7352285 NSSYPCHNDSHFHVQRLFDK*FIIARFVKETCQPSLIPNATE 7352410
Score = 50.6 bits (104), Expect(2) = 2e-018
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3 / +3
Query: 263 SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRLNRF 141
+L I+ ISMF C SS* GL* PA QVSFQMRL F
Sbjct: 7352295 TLAIMIAISMFSDCLTNSS*LHGL*KKPASQVSFQMRLKMF 7352417
Score = 41.8 bits (85), Expect(2) = 4e-015
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2 / -1
Query: 146 YSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
+S AFGMRL QV FT+ I N + *TWK L G
Sbjct: 7352412 FSVAFGMRLGWQVSFTNRAIMNYLSNSR*TWKWLSLWQG 7352296
Score = 39.1 bits (79), Expect(2) = 7e-014
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / -2
Query: 135 VLESIQPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXG 263
+L+ Q HLE*DL R LQ L T +HGN +Y G
Sbjct: 7352423 LLKHFQSHLE*DLAGRFLLQTVQL*TICQTVAEHGNGYHYGKG 7352295
Score = 35.0 bits (70), Expect(2) = 1e-005
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1 / +1
Query: 241 FPCLXXAXXXVRNXXACKXXLLXKSHSKC 155
FPC V N CK L KSHSKC
Sbjct: 7352317 FPCSATV*QIVHNCTVCKRNLPAKSHSKC 7352403
>dbj|AK060522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-E03, full
insert sequence
Length = 1793
Score = 82.2 bits (173), Expect(2) = 1e-031
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
+C+ STSAGL QILPWL+YH V+GV+ F L VEG AAKP VLESI
Sbjct: 398 VCVQTSTSAGLDQILPWLFYHKVVGVAQFLLFVEGRAAKPQVAGVLESI 544
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 34/61 (55%), Positives = 36/61 (59%)
Frame = +1 / +3
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
SRIWNET AG FYKP YEL Q LNMEM I+M RDA MD I TD + E
Sbjct: 603 SRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIVMARDAAMDWIIHLDTDELLYPGGGAE 782
Query: 331 Y 333
Y
Sbjct: 783 Y 785
Score = 59.7 bits (124), Expect(2) = 5e-017
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -1 / -3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVL 17
+DSRT G AA PST + C TP TL * +HGRIW PA+VL
Sbjct: 543 MDSRTPATWGLAALPSTKSRNCATPTTLW*KSHGRIWSNPAEVL 412
Score = 50.1 bits (103), Expect(2) = 5e-017
Identities = 29/61 (47%), Positives = 30/61 (49%)
Frame = -3 / -2
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
YS SSV M SI AS I ISM C SS* GL* PA VSFQ+R
Sbjct: 784 YSAPPPGYSNSSVSRCMIQSIAASRAITIAISMLSDCFTNSS*LQGL*KKPASHVSFQIR 605
Query: 152 L 150
L
Sbjct: 604 L 602
Score = 42.8 bits (87), Expect = 0.015
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2 / -1
Query: 300 ISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNA 154
IS D IH IP H+N H HV L F+ V+ TC +P++
Sbjct: 752 ISV*MYDPIHCRIPSHHNSHLHVERLFHK*FIVARFVEKTCKPCFVPDS 606
>gb|CB669080.1|CB669080 OSJNEe01E24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E24 5', mRNA sequence
Length = 732
Score = 112 bits (240), Expect(2) = 4e-030
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
ICITGSTSAGLHQILPWLYYH VIGVSHFFL VEGEAAKPA TSVLESI+
Sbjct: 461 ICITGSTSAGLHQILPWLYYHKVIGVSHFFLFVEGEAAKPAVTSVLESIR 610
Score = 108 bits (231), Expect(2) = 2e-026
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / -1
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRTEV AGFAASPST RKKCETPMTL *YNHGRIWC PADVLPVIQI
Sbjct: 606 MDSRTEVTAGFAASPSTKRKKCETPMTLW*YNHGRIWCNPADVLPVIQI 460
Score = 80.3 bits (169), Expect(2) = 1e-016
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3 / -3
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN G SW SLSFN +++*NT+D+V++QPWKNLV* RCASRDTD
Sbjct: 607 NGFKN*GNSWFRSLSFNKKEKV*NTDDLVVVQPWKNLV*PCRCASRDTD 461
Score = 77.6 bits (163), Expect(2) = 7e-016
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1 / +3
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSVSREAHL YT+FFHGC T S VFH + LKERL++QL P FLN F
Sbjct: 459 RSVSREAHLQGYTKFFHGCTTTRSSVFHTFSFLLKERLRNQLLPQFLNPF 608
Score = 76.2 bits (160), Expect(2) = 1e-013
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = +2 / +1
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLYHGKHIC TP+SSMVVL Q H CFT *RRGC+ S L S*I+S
Sbjct: 460 DLYHGKHICRVTPNSSMVVLPQGHRCFTLFPFC*RRGCETSCYLSS*IHS 609
Score = 51.9 bits (107), Expect(2) = 3e-008
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2 / -2
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C +TTMEE GV QMCFP*YRS
Sbjct: 548 KSVKHR*PCGSTTMEEFGVTLQMCFP*YRS 459
Score = 41.4 bits (84), Expect(2) = 4e-030
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +1 / +2
Query: 151 SRIWNETXXAGXFYKPXXYEL 213
SRIWNET AG FYKP YEL
Sbjct: 662 SRIWNETWLAGFFYKPCNYEL 724
Score = 32.7 bits (65), Expect(2) = 2e-026
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 212 SS*XXGL*XXPAXQVSFQMRL 150
SS* GL* PA QVSFQMRL
Sbjct: 723 SS*LHGL*KKPASQVSFQMRL 661
Score = 28.6 bits (56), Expect(2) = 7e-016
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 155 AFGMRLXXQVXFTSXXITN 211
AFGMRL QV FT+ I N
Sbjct: 666 AFGMRLGWQVSFTNRAIMN 722
Score = 28.6 bits (56), Expect(2) = 1e-016
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1 / -2
Query: 211 VRNXXACKXXLLXKSHSKC 155
V N CK L KSHSKC
Sbjct: 722 VHNCTVCKRNLPAKSHSKC 666
Score = 28.1 bits (55), Expect(2) = 3e-008
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2 / -3
Query: 210 FVXXXLVKXTCXXSLIPNA 154
F+ VK TC SLIPNA
Sbjct: 721 FIIARFVKETCQPSLIPNA 665
Score = 22.6 bits (43), Expect(2) = 1e-013
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3 / +1
Query: 156 HLE*DLXSRXXLQAXXLRT 212
HLE*DL R LQ L T
Sbjct: 667 HLE*DLAGRFLLQTVQL*T 723
>gb|AACV01008784.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008784, whole
genome shotgun sequence
Length = 47465
Score = 82.2 bits (173), Expect(2) = 4e-025
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / -3
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
+C+ STSAGL QILPWL+YH V+GV+ F L VEG AAKP VLESI
Sbjct: 45390 VCVQTSTSAGLDQILPWLFYHKVVGVAQFLLFVEGRAAKPQVAGVLESI 45244
Score = 61.6 bits (128), Expect(2) = 4e-025
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +1 / -1
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET AG FYKP YEL Q LNMEM I+M R
Sbjct: 44669 SRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIVMAR 44559
Score = 59.7 bits (124), Expect(2) = 1e-011
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -1 / +2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVL 17
+DSRT G AA PST + C TP TL * +HGRIW PA+VL
Sbjct: 45245 MDSRTPATWGLAALPSTKSRNCATPTTLW*KSHGRIWSNPAEVL 45376
Score = 38.2 bits (77), Expect(2) = 1e-011
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / +1
Query: 254 IIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
I ISM C SS* GL* PA VSFQ+RL
Sbjct: 44566 ITIAISMLSDCFTNSS*LQGL*KKPASHVSFQIRL 44670
Score = 34.1 bits (68), Expect = 6.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2 / +3
Query: 261 PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNA 154
P H+N H HV L F+ V+ TC +P++
Sbjct: 44559 PSHHNSHLHVERLFHK*FIVARFVEKTCKPCFVPDS 44666
>gb|CH401185.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000022
genomic scaffold, whole genome shotgun sequence
Length = 1402826
Score = 82.2 bits (173), Expect(2) = 1e-023
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
+C+ STSAGL QILPWL+YH V+GV+ F L VEG AAKP VLESI
Sbjct: 910982 VCVQTSTSAGLDQILPWLFYHKVVGVAQFLLFVEGRAAKPQVAGVLESI 911128
Score = 61.6 bits (128), Expect(2) = 1e-023
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +1 / +3
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET AG FYKP YEL Q LNMEM I+M R
Sbjct: 911703 SRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIVMAR 911813
Score = 59.7 bits (124), Expect(2) = 4e-010
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -1 / -3
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVL 17
+DSRT G AA PST + C TP TL * +HGRIW PA+VL
Sbjct: 911127 MDSRTPATWGLAALPSTKSRNCATPTTLW*KSHGRIWSNPAEVL 910996
Score = 38.2 bits (77), Expect(2) = 4e-010
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / -2
Query: 254 IIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
I ISM C SS* GL* PA VSFQ+RL
Sbjct: 911806 ITIAISMLSDCFTNSS*LQGL*KKPASHVSFQIRL 911702
Score = 34.1 bits (68), Expect = 6.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2 / -1
Query: 261 PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNA 154
P H+N H HV L F+ V+ TC +P++
Sbjct: 911813 PSHHNSHLHVERLFHK*FIVARFVEKTCKPCFVPDS 911706
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 82.2 bits (173), Expect(2) = 2e-022
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3 / +2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
+C+ STSAGL QILPWL+YH V+GV+ F L VEG AAKP VLESI
Sbjct: 5214881 VCVQTSTSAGLDQILPWLFYHKVVGVAQFLLFVEGRAAKPQVAGVLESI 5215027
Score = 61.6 bits (128), Expect(2) = 2e-022
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +1 / +3
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
SRIWNET AG FYKP YEL Q LNMEM I+M R
Sbjct: 5215602 SRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIVMAR 5215712
Score = 59.7 bits (124), Expect(2) = 7e-009
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -1 / -2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVL 17
+DSRT G AA PST + C TP TL * +HGRIW PA+VL
Sbjct: 5215026 MDSRTPATWGLAALPSTKSRNCATPTTLW*KSHGRIWSNPAEVL 5214895
Score = 38.2 bits (77), Expect(2) = 7e-009
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / -1
Query: 254 IIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
I ISM C SS* GL* PA VSFQ+RL
Sbjct: 5215705 ITIAISMLSDCFTNSS*LQGL*KKPASHVSFQIRL 5215601
Score = 34.1 bits (68), Expect = 6.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2 / -3
Query: 261 PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNA 154
P H+N H HV L F+ V+ TC +P++
Sbjct: 5215712 PSHHNSHLHVERLFHK*FIVARFVEKTCKPCFVPDS 5215605
>gb|AU091600.1|AU091600 AU091600 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60801, mRNA sequence
Length = 334
Score = 98.2 bits (208), Expect(2) = 2e-020
Identities = 41/50 (82%), Positives = 42/50 (84%)
Frame = +3 / -2
Query: 3 ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESIQ 152
IC TGSTS GL QILPWLY H VIGVSHFFL VEG AAKPA TSVLESI+
Sbjct: 228 ICXTGSTSXGLXQILPWLYXHKVIGVSHFFLFVEGXAAKPAVTSVLESIR 79
Score = 97.3 bits (206), Expect(2) = 8e-020
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -1 / +2
Query: 148 IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
+DSRT+V AGFAASPST RKKCETPMTL YNHGRI C P DVLPVIQI
Sbjct: 83 MDSRTDVTAGFAASPSTKRKKCETPMTLWXYNHGRIXCNPXDVLPVIQI 229
Score = 66.1 bits (138), Expect(2) = 3e-010
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = -3 / +1
Query: 149 NRFKNRGXSWLCSLSFN**KEM*NTNDIVIIQPWKNLV*ASRCASRDTD 3
N FKN SW S SFN +++*NT+D+V++QPWKNL * CASR TD
Sbjct: 82 NGFKN*CNSWFRSXSFNKKEKV*NTDDLVVVQPWKNLX*PXXCASRXTD 228
Score = 64.3 bits (134), Expect(2) = 5e-009
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +1 / -3
Query: 1 RSVSREAHLLAYTRFFHGCIITMSLVFHISFY*LKERLQSQLXPLFLNLF 150
RSV REAH Y +FFHGC T S VFH + LKE L++QL FLN F
Sbjct: 230 RSVXREAHXQGYXKFFHGCTTTRSSVFHTFSFLLKEXLRNQLLHQFLNPF 81
Score = 56.5 bits (117), Expect = 1e-006
Identities = 27/50 (54%), Positives = 31/50 (62%)
Frame = +2 / -1
Query: 2 DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IYS 151
DLY GKHI T +SSMVV Q H CFT *RR C+ S + S*I+S
Sbjct: 229 DLYXGKHIXRVTXNSSMVVXPQGHRCFTLFPFC*RRXCETSCYISS*IHS 80
Score = 42.8 bits (87), Expect = 0.015
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / +3
Query: 90 RNVKHQ*HCDNTTMEESGVGQQMCFP*YRS 1
++VKH+* C TTMEE V MCFP YRS
Sbjct: 141 KSVKHR*PCGXTTMEEFXVTLXMCFPXYRS 230
Score = 21.2 bits (40), Expect(2) = 2e-020
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / -2
Query: 151 SRIWNET 171
SRIWNET
Sbjct: 27 SRIWNET 7
Score = 20.3 bits (38), Expect(2) = 8e-020
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / +2
Query: 173 QVSFQMRL 150
QVSFQMRL
Sbjct: 5 QVSFQMRL 28
Score = 18.9 bits (35), Expect(2) = 3e-010
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1 / +3
Query: 172 KSHSKC 155
KSHSKC
Sbjct: 6 KSHSKC 23
Score = 16.6 bits (30), Expect(2) = 5e-009
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / -3
Query: 155 AFGMRL 172
AFGMRL
Sbjct: 23 AFGMRL 6
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,524,712,198
Number of Sequences: 438736
Number of extensions: 14972857
Number of successful extensions: 95909
Number of sequences better than 10.0: 25
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 54534245340
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)