TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF18e02.yg.3.1
(315 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_197706.1| Oryza sativa (japonica cultivar-group) put... 155 1e-036
gb|CB670593.1|CB670593 OSJNEe03L24.f OSJNEe Oryza sativa (j... 154 4e-036
gb|AACV01022097.1| Oryza sativa (japonica cultivar-group) c... 91 2e-025
gb|AACV01005722.1| Oryza sativa (japonica cultivar-group) c... 87 3e-024
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 91 3e-024
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 87 4e-023
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 87 5e-023
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 91 2e-021
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 87 4e-021
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 91 8e-021
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 91 8e-021
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 91 8e-021
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 91 8e-021
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 87 1e-019
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 87 3e-019
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 87 3e-019
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 87 3e-019
gb|CF307419.1|CF307419 HDA1--06-K09.g1 OsHDAC1-overexpressi... 45 0.002
gb|CG206578.1|CG206578 TOS0198 TAMU Rice Japonica Nipponbar... 39 0.15
dbj|AP005677.1| Oryza sativa (japonica cultivar-group) chro... 38 0.28
gb|AACV01020274.1| Oryza sativa (japonica cultivar-group) c... 38 0.28
gb|AC108761.2| Oryza sativa (japonica cultivar-group) chrom... 38 0.28
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 38 0.28
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 38 0.28
gb|AQ289498.1|AQ289498 nbxb0035E10f CUGI Rice BAC Library O... 36 1.00
gb|CB670678.1|CB670678 OSJNEe03O01.r OSJNEe Oryza sativa (j... 36 1.4
gb|CB671007.1|CB671007 OSJNEe04F22.r OSJNEe Oryza sativa (j... 36 1.4
gb|CB674318.1|CB674318 OSJNEe09E22.r OSJNEe Oryza sativa (j... 36 1.4
gb|CB682409.1|CB682409 OSJNEf09L08.r OSJNEf Oryza sativa (j... 36 1.4
gb|AACV01012971.1| Oryza sativa (japonica cultivar-group) c... 36 1.4
ref|XM_493697.2| Oryza sativa (japonica cultivar-group), mRNA 36 1.4
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 36 1.4
dbj|AP000559.1| Oryza sativa (japonica cultivar-group) geno... 36 1.4
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 36 1.4
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 36 1.4
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 36 1.4
gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23... 27 3.1
gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07... 27 3.2
gb|AACV01021990.1| Oryza sativa (japonica cultivar-group) c... 27 3.7
ref|NM_197512.1| Oryza sativa (japonica cultivar-group) put... 27 4.0
dbj|AK065403.1| Oryza sativa (japonica cultivar-group) cDNA... 27 4.1
ref|NT_107196.1| Oryza sativa (japonica cultivar-group) 32 9.0
>ref|NM_197706.1| Oryza sativa (japonica cultivar-group) putative transcription
regulatory protein (OSJNBa0010C11.3), mRNA
Length = 7478
Score = 155 bits (334), Expect = 1e-036
Identities = 67/104 (64%), Positives = 80/104 (76%)
Frame = +3 / +1
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTV 182
VSEQ+VA ISYFSIDSY+KLV +V+KYSSV+I P+KGS+ +KI+SV V
Sbjct: 5659 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVKYSSVDIGPSKGSLFNKILSVIV 5838
Query: 183 RTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
R IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 5839 RIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 5970
Score = 108 bits (230), Expect = 2e-022
Identities = 52/85 (61%), Positives = 58/85 (68%)
Frame = -3 / -1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGV 134
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE IL LPL G
Sbjct: 5969 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERILLKRLPLLGP 5790
Query: 133 ISTEEYLRTITTSFAYESMEKYEIW 59
ISTEEY T TSF YES+EKYEIW
Sbjct: 5789 ISTEEYFTTSATSFEYESIEKYEIW 5715
Score = 95.0 bits (201), Expect = 2e-018
Identities = 53/104 (50%), Positives = 64/104 (61%)
Frame = +2 / +3
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQDYFCYC 181
SL A+ CSW SA ATP FI +*FI KA G G +VLF G T+*R+ D FCY
Sbjct: 5658 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGKVLFCGYWTE*RKPF**DSFCYS 5837
Query: 182 EDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 5838 *DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 5969
Score = 77.1 bits (162), Expect = 5e-013
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = -2 / -3
Query: 314 NLKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWC 135
+LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL K +F
Sbjct: 5970 HLKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNLIKKASFTRS 5791
Query: 134 YLH*RVLENHNHELCI*INGKI*NM 60
+H RVL + H+L I*IN ++*N+
Sbjct: 5790 NIHRRVLYHQCHKL*I*IN*EV*NL 5716
Score = 55.6 bits (115), Expect(2) = 3e-013
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = -1 / -2
Query: 147 LYLVLSPLKST*EP*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
LY V P KST P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 5803 LYSVQYPQKSTLPPVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 5657
Score = 51.9 bits (107), Expect = 2e-005
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1 / +2
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
*S SK LLL LS+ SN FH LIH+QS W W+ STL W ++K +
Sbjct: 5657 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW*STLLWILDRVKEAF 5812
Score = 41.4 bits (84), Expect(2) = 3e-013
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 5968 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 5846
>gb|CB670593.1|CB670593 OSJNEe03L24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03L24 5', mRNA sequence
Length = 849
Score = 154 bits (330), Expect = 4e-036
Identities = 66/103 (64%), Positives = 79/103 (76%)
Frame = +3 / +2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTV 182
VSEQ+VA ISYFSIDSY+KLV +V+KYSSV+I P+KGS+ +KI+SV V
Sbjct: 527 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVKYSSVDIGPSKGSLFNKILSVIV 706
Query: 183 RTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQ 311
R IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQ
Sbjct: 707 RIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQ 835
Score = 107 bits (229), Expect = 3e-022
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = -3 / -1
Query: 259 QFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGVISTEEYLRTITTSFAYES 80
+F+ NRKYGRGL E FFSSAS *++LT+TE IL LPL G ISTEEY T TSF YES
Sbjct: 783 KFMNNRKYGRGLKETFFSSASL*IILTITERILLKRLPLLGPISTEEYFTTSATSFEYES 604
Query: 79 MEKYEIW 59
+EKYEIW
Sbjct: 603 IEKYEIW 583
Score = 95.0 bits (201), Expect = 2e-018
Identities = 53/104 (50%), Positives = 64/104 (61%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQDYFCYC 181
SL A+ CSW SA ATP FI +*FI KA G G +VLF G T+*R+ D FCY
Sbjct: 526 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGKVLFCGYWTE*RKPF**DSFCYS 705
Query: 182 EDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 706 *DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 837
Score = 76.7 bits (161), Expect = 7e-013
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = -2 / -3
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWCY 132
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL K +F
Sbjct: 835 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNLIKKASFTRSN 656
Query: 131 LH*RVLENHNHELCI*INGKI*NM 60
+H RVL + H+L I*IN ++*N+
Sbjct: 655 IHRRVLYHQCHKL*I*IN*EV*NL 584
Score = 55.6 bits (115), Expect(2) = 3e-013
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = -1 / -2
Query: 147 LYLVLSPLKST*EP*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
LY V P KST P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 671 LYSVQYPQKSTLPPVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 525
Score = 51.9 bits (107), Expect = 2e-005
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
*S SK LLL LS+ SN FH LIH+QS W W+ STL W ++K +
Sbjct: 525 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW*STLLWILDRVKEAF 680
Score = 41.4 bits (84), Expect(2) = 3e-013
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 836 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 714
>gb|AACV01022097.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022097, whole
genome shotgun sequence
Length = 33930
Score = 90.9 bits (192), Expect(3) = 2e-025
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3 / -2
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+SV VR IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 5978 QILSVIVRIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 5826
Score = 56.1 bits (116), Expect(3) = 4e-014
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3 / +1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESI 152
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE I + +
Sbjct: 5827 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERICKEV 5988
Score = 55.1 bits (114), Expect(2) = 1e-009
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2 / +3
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNL 162
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL
Sbjct: 5829 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNL 5978
Score = 53.8 bits (111), Expect(2) = 2e-011
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2 / -1
Query: 158 FQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
F D FCY D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 5982 FADSFCYS*DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 5827
Score = 45.1 bits (92), Expect(3) = 4e-014
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / +1
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 6637 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 6744
Score = 43.7 bits (89), Expect(3) = 2e-025
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 6742 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 6629
Score = 42.3 bits (86), Expect(2) = 2e-011
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / -1
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 6744 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 6634
Score = 41.4 bits (84), Expect = 0.030
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / +2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 5828 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 5950
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / -2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 6743 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 6630
Score = 35.4 bits (71), Expect(2) = 1e-009
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 6636 TSATSFEYESIEKYEIW 6686
Score = 31.3 bits (62), Expect(3) = 2e-025
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3 / -1
Query: 111 LKYSSVEITPNKGSILSKI 167
L+YSSV+I P+KGS+ +K+
Sbjct: 6108 LQYSSVDIGPSKGSLFNKV 6052
Score = 25.8 bits (50), Expect(3) = 4e-014
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +2
Query: 151 LPLFGVISTEEYLR 110
LPL G ISTEEY R
Sbjct: 6068 LPLLGPISTEEY*R 6109
>gb|AACV01005722.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005722, whole
genome shotgun sequence
Length = 39137
Score = 86.8 bits (183), Expect(3) = 3e-024
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / -1
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 12728 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 12576
Score = 58.8 bits (122), Expect(2) = 1e-009
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / +1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 12577 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 12726
Score = 50.6 bits (104), Expect(2) = 7e-011
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / -3
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 12705 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 12577
Score = 46.0 bits (94), Expect(3) = 3e-024
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / -2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 13336 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 13223
Score = 44.1 bits (90), Expect(2) = 7e-011
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / -1
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 13337 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 13224
Score = 42.3 bits (86), Expect(2) = 3e-004
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / +2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 12578 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 12700
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / -3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 13335 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 13222
Score = 31.3 bits (62), Expect(2) = 1e-009
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1 / +3
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQ 16
P* +A NQ NMK+ V V+ +E +HQ QQ
Sbjct: 13230 P*LQASKKNQLGNMKF*VVVMTSETLHQ*QQ 13322
Score = 29.5 bits (58), Expect(3) = 3e-024
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / -3
Query: 105 MVLKYSSVEITPNKGSILSKIIS 173
+ L+YSS E PNK S+L K+ S
Sbjct: 12879 LCLQYSSAETGPNKCSLLPKVTS 12811
Score = 23.5 bits (45), Expect(2) = 3e-004
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +1
Query: 170 NNLGKYTAFIW 138
+NLGK AFIW
Sbjct: 12814 SNLGKKAAFIW 12846
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
sequence
Length = 147117
Score = 90.9 bits (192), Expect(3) = 3e-024
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3 / -3
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+SV VR IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 43453 QILSVIVRIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 43301
Score = 56.1 bits (116), Expect(3) = 7e-013
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3 / +3
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESI 152
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE I + +
Sbjct: 43302 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERICKEV 43463
Score = 55.1 bits (114), Expect(2) = 4e-009
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2 / +2
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNL 162
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL
Sbjct: 43304 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNL 43453
Score = 53.8 bits (111), Expect(2) = 9e-011
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2 / -2
Query: 158 FQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
F D FCY D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 43457 FADSFCYS*DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 43302
Score = 45.1 bits (92), Expect(3) = 7e-013
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / +3
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 44112 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 44219
Score = 43.7 bits (89), Expect(3) = 3e-024
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -1
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 44217 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 44104
Score = 42.3 bits (86), Expect(2) = 9e-011
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / -2
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 44219 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 44109
Score = 41.4 bits (84), Expect = 0.030
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / +1
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 43303 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 43425
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / -3
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 44218 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 44105
Score = 35.4 bits (71), Expect(2) = 4e-009
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 44111 TSATSFEYESIEKYEIW 44161
Score = 31.3 bits (62), Expect(3) = 3e-024
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3 / -2
Query: 111 LKYSSVEITPNKGSILSKI 167
L+YSSV+I P+KGS+ +K+
Sbjct: 43583 LQYSSVDIGPSKGSLFNKV 43527
Score = 25.8 bits (50), Expect(3) = 7e-013
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 151 LPLFGVISTEEYLR 110
LPL G ISTEEY R
Sbjct: 43543 LPLLGPISTEEY*R 43584
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAb0079B22, from chromosome 3, complete sequence
Length = 156933
Score = 86.8 bits (183), Expect(3) = 4e-023
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 78687 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 78839
Score = 58.8 bits (122), Expect(2) = 5e-009
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / -3
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 78838 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 78689
Score = 50.6 bits (104), Expect(2) = 3e-010
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 78710 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 78838
Score = 46.0 bits (94), Expect(3) = 4e-023
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 78079 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 78192
Score = 44.1 bits (90), Expect(2) = 3e-010
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 78078 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 78191
Score = 42.3 bits (86), Expect(2) = 3e-004
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / -1
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 78837 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 78715
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / +2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 78080 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 78193
Score = 31.3 bits (62), Expect(2) = 3e-004
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1 / -2
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQ 16
P* +A NQ NMK+ V V+ +E +HQ QQ
Sbjct: 78185 P*LQASKKNQLGNMKF*VVVMTSETLHQ*QQ 78093
Score = 29.5 bits (58), Expect(3) = 4e-023
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 105 MVLKYSSVEITPNKGSILSKIIS 173
+ L+YSS E PNK S+L K+ S
Sbjct: 78536 LCLQYSSAETGPNKCSLLPKVTS 78604
Score = 23.5 bits (45), Expect(2) = 5e-009
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 170 NNLGKYTAFIW 138
+NLGK AFIW
Sbjct: 78601 SNLGKKAAFIW 78569
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
Length = 162241
Score = 86.8 bits (183), Expect(3) = 5e-023
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / -1
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 117931 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 117779
Score = 58.8 bits (122), Expect(2) = 5e-009
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / +3
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 117780 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 117929
Score = 50.6 bits (104), Expect(2) = 3e-010
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / -3
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 117908 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 117780
Score = 46.0 bits (94), Expect(3) = 5e-023
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / -2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 118539 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 118426
Score = 44.1 bits (90), Expect(2) = 3e-010
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / -1
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 118540 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 118427
Score = 42.3 bits (86), Expect(2) = 3e-004
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / +1
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 117781 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 117903
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / -3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 118538 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 118425
Score = 31.3 bits (62), Expect(2) = 3e-004
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1 / +2
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQ 16
P* +A NQ NMK+ V V+ +E +HQ QQ
Sbjct: 118433 P*LQASKKNQLGNMKF*VVVMTSETLHQ*QQ 118525
Score = 29.5 bits (58), Expect(3) = 5e-023
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / -3
Query: 105 MVLKYSSVEITPNKGSILSKIIS 173
+ L+YSS E PNK S+L K+ S
Sbjct: 118082 LCLQYSSAETGPNKCSLLPKVTS 118014
Score = 23.5 bits (45), Expect(2) = 5e-009
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 170 NNLGKYTAFIW 138
+NLGK AFIW
Sbjct: 118017 SNLGKKAAFIW 118049
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 90.9 bits (192), Expect(3) = 2e-021
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3 / -2
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+SV VR IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 3290634 QILSVIVRIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 3290482
Score = 56.1 bits (116), Expect(2) = 8e-011
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3 / +2
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESI 152
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE I + +
Sbjct: 3290483 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERICKEV 3290644
Score = 55.1 bits (114), Expect(2) = 1e-008
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2 / +1
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNL 162
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL
Sbjct: 3290485 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNL 3290634
Score = 53.8 bits (111), Expect(2) = 2e-009
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2 / -1
Query: 158 FQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
F D FCY D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 3290638 FADSFCYS*DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 3290483
Score = 45.1 bits (92), Expect(2) = 8e-011
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / +2
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 3291293 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 3291400
Score = 43.7 bits (89), Expect(3) = 2e-021
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 3291398 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 3291285
Score = 42.3 bits (86), Expect(2) = 2e-009
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / -1
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 3291400 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 3291290
Score = 41.4 bits (84), Expect(2) = 9e-004
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / +3
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 3290484 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 3290606
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / -2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 3291399 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 3291286
Score = 35.4 bits (71), Expect(2) = 9e-004
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +1
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 3291292 TSATSFEYESIEKYEIW 3291342
Score = 31.3 bits (62), Expect(3) = 2e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3 / -1
Query: 111 LKYSSVEITPNKGSILSKI 167
L+YSSV+I P+KGS+ +K+
Sbjct: 3290764 LQYSSVDIGPSKGSLFNKV 3290708
Score = 26.7 bits (52), Expect(2) = 2.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 22 LLVDHLSNHHSNPIFHIFPLIHMQ 93
LL DHL HH + ++ L+H Q
Sbjct: 2088316 LLEDHLKLHHQQYLGVLYMLLHQQ 2088245
Score = 25.8 bits (50), Expect(2) = 1e-008
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +3
Query: 151 LPLFGVISTEEYLR 110
LPL G ISTEEY R
Sbjct: 3290724 LPLLGPISTEEY*R 3290765
Score = 24.9 bits (48), Expect(2) = 2.3
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1 / -2
Query: 76 PLIHMQSSWLWFSSTLQ 126
P+ H + +W+W+ S L+
Sbjct: 2088141 PVCHNRCNWIWYRSILK 2088091
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 86.8 bits (183), Expect(3) = 4e-021
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 144687 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 144839
Score = 58.8 bits (122), Expect(2) = 5e-009
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / -3
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 144838 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 144689
Score = 50.6 bits (104), Expect(2) = 2e-009
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 144710 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 144838
Score = 46.0 bits (94), Expect(3) = 4e-021
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 144079 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 144192
Score = 44.1 bits (90), Expect(2) = 2e-009
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 144078 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 144191
Score = 42.3 bits (86), Expect(2) = 5e-004
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / -1
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 144837 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 144715
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / +2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 144080 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 144193
Score = 29.5 bits (58), Expect(3) = 4e-021
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 105 MVLKYSSVEITPNKGSILSKIIS 173
+ L+YSS E PNK S+L K+ S
Sbjct: 144536 LCLQYSSAETGPNKCSLLPKVTS 144604
Score = 23.5 bits (45), Expect(2) = 5e-009
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 170 NNLGKYTAFIW 138
+NLGK AFIW
Sbjct: 144601 SNLGKKAAFIW 144569
Score = 22.6 bits (43), Expect(2) = 5e-004
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3 / -1
Query: 172 EIILESILPLFGVISTEEYLR 110
E+ L L LFG +S +EY R
Sbjct: 144603 EVTLGRRLHLFGPVSADEY*R 144541
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 90.9 bits (192), Expect(2) = 8e-021
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3 / -1
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+SV VR IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 21379703 QILSVIVRIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 21379551
Score = 56.1 bits (116), Expect(2) = 4e-010
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3 / +1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESI 152
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE I + +
Sbjct: 21379552 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERICKEV 21379713
Score = 55.1 bits (114), Expect(2) = 4e-007
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2 / +3
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNL 162
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL
Sbjct: 21379554 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNL 21379703
Score = 53.8 bits (111), Expect(2) = 4e-009
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2 / -3
Query: 158 FQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
F D FCY D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 21379707 FADSFCYS*DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 21379552
Score = 45.1 bits (92), Expect(2) = 4e-010
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / +1
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 21380362 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 21380469
Score = 43.7 bits (89), Expect(2) = 4e-009
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 21380467 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 21380354
Score = 42.3 bits (86), Expect = 0.016
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 21380469 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 21380359
Score = 41.4 bits (84), Expect = 0.030
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / +2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 21379553 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 21379675
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / -1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 21380468 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 21380355
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 21380361 TSATSFEYESIEKYEIW 21380411
Score = 31.3 bits (62), Expect(2) = 8e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3 / -3
Query: 111 LKYSSVEITPNKGSILSKI 167
L+YSSV+I P+KGS+ +K+
Sbjct: 21379833 LQYSSVDIGPSKGSLFNKV 21379777
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 90.9 bits (192), Expect(2) = 8e-021
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3 / -2
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+SV VR IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 21368440 QILSVIVRIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 21368288
Score = 56.1 bits (116), Expect(2) = 4e-010
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3 / +3
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESI 152
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE I + +
Sbjct: 21368289 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERICKEV 21368450
Score = 55.1 bits (114), Expect(2) = 4e-007
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2 / +2
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNL 162
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL
Sbjct: 21368291 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNL 21368440
Score = 53.8 bits (111), Expect(2) = 4e-009
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2 / -1
Query: 158 FQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
F D FCY D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 21368444 FADSFCYS*DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 21368289
Score = 45.1 bits (92), Expect(2) = 4e-010
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / +3
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 21369099 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 21369206
Score = 43.7 bits (89), Expect(2) = 4e-009
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 21369204 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 21369091
Score = 42.3 bits (86), Expect = 0.016
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / -1
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 21369206 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 21369096
Score = 41.4 bits (84), Expect = 0.030
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / +1
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 21368290 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 21368412
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / -2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 21369205 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 21369092
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 21369098 TSATSFEYESIEKYEIW 21369148
Score = 31.3 bits (62), Expect(2) = 8e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3 / -1
Query: 111 LKYSSVEITPNKGSILSKI 167
L+YSSV+I P+KGS+ +K+
Sbjct: 21368570 LQYSSVDIGPSKGSLFNKV 21368514
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 90.9 bits (192), Expect(2) = 8e-021
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3 / -1
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+SV VR IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 20208833 QILSVIVRIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 20208681
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3 / +1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESI 152
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE I + +
Sbjct: 20208682 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERICKEV 20208843
Score = 55.1 bits (114), Expect(2) = 4e-007
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2 / +3
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNL 162
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL
Sbjct: 20208684 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNL 20208833
Score = 53.8 bits (111), Expect(2) = 4e-009
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2 / -3
Query: 158 FQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
F D FCY D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 20208837 FADSFCYS*DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 20208682
Score = 45.1 bits (92), Expect(2) = 3e-010
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / +1
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 20209492 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 20209599
Score = 43.7 bits (89), Expect(2) = 4e-009
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 20209597 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 20209484
Score = 42.3 bits (86), Expect = 0.016
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 20209599 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 20209489
Score = 41.4 bits (84), Expect = 0.030
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / +2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 20208683 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 20208805
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / -1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 20209598 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 20209485
Score = 35.4 bits (71), Expect(2) = 4e-007
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 20209491 TSATSFEYESIEKYEIW 20209541
Score = 31.3 bits (62), Expect(2) = 8e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3 / -3
Query: 111 LKYSSVEITPNKGSILSKI 167
L+YSSV+I P+KGS+ +K+
Sbjct: 20208963 LQYSSVDIGPSKGSLFNKV 20208907
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 90.9 bits (192), Expect(2) = 8e-021
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3 / -1
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+SV VR IQ+DAEEKK SFNPRPYFRL IN L +LTT+D HHD +NFQV
Sbjct: 9343039 QILSVIVRIIQRDAEEKKVSFNPRPYFRLFINLLSELTTSDLHHDSANFQV 9342887
Score = 56.1 bits (116), Expect(2) = 2e-010
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3 / +3
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESI 152
T*KL S S+F+ NRKYGRGL E FFSSAS *++LT+TE I + +
Sbjct: 9342888 T*KLALSW*RSEVVSSLSKFMNNRKYGRGLKETFFSSASL*IILTITERICKEV 9343049
Score = 55.1 bits (114), Expect(2) = 1e-008
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2 / +2
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNL 162
LKI TIM+ + SSK+ + IY Q ++ I+ +FLF SI LN P+ NR NL
Sbjct: 9342890 LKISTIMVKVRSSKLTKQIYEQPKIRPRIERNFLFFSISLNNPNYNRKNL 9343039
Score = 53.8 bits (111), Expect(2) = 2e-009
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2 / -3
Query: 158 FQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
F D FCY D+S+RC* KESF S + +V+K A * YY+* * *FSG
Sbjct: 9343043 FADSFCYS*DYSKRC*RKESFFQSSAVFSVVHKFA**AYYF*PSP**C*FSG 9342888
Score = 45.1 bits (92), Expect(2) = 2e-010
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / +3
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 9343698 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 9343805
Score = 43.7 bits (89), Expect(2) = 2e-009
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / -2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 9343803 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 9343690
Score = 42.3 bits (86), Expect = 0.016
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 9343805 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 9343695
Score = 41.4 bits (84), Expect(2) = 0.002
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -1 / +1
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
PEN*++H Q ** H ANL T + D* KLSF QHL E
Sbjct: 9342889 PEN*HYHGEGQK**AH*ANL*TTENTAED*KKLSFLQHLFE 9343011
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / -1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 9343804 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 9343691
Score = 35.4 bits (71), Expect(2) = 0.002
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 9343697 TSATSFEYESIEKYEIW 9343747
Score = 31.3 bits (62), Expect(2) = 8e-021
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3 / -3
Query: 111 LKYSSVEITPNKGSILSKI 167
L+YSSV+I P+KGS+ +K+
Sbjct: 9343169 LQYSSVDIGPSKGSLFNKV 9343113
Score = 26.7 bits (52), Expect(2) = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 22 LLVDHLSNHHSNPIFHIFPLIHMQ 93
LL DHL HH + ++ L+H Q
Sbjct: 8127568 LLEDHLKLHHQQYLGVLYMLLHQQ 8127497
Score = 25.8 bits (50), Expect(2) = 1e-008
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 151 LPLFGVISTEEYLR 110
LPL G ISTEEY R
Sbjct: 9343129 LPLLGPISTEEY*R 9343170
Score = 24.9 bits (48), Expect(2) = 2.1
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1 / -2
Query: 76 PLIHMQSSWLWFSSTLQ 126
P+ H + +W+W+ S L+
Sbjct: 8127393 PVCHNRCNWIWYRSILK 8127343
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 86.8 bits (183), Expect(2) = 1e-019
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / +2
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 171935 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 172087
Score = 58.8 bits (122), Expect = 2e-007
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / -1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 172086 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 171937
Score = 50.6 bits (104), Expect(2) = 2e-008
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +1
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 171958 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 172086
Score = 46.0 bits (94), Expect(2) = 1e-019
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +3
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 171327 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 171440
Score = 44.1 bits (90), Expect(2) = 2e-008
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / +2
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 171326 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 171439
Score = 42.3 bits (86), Expect = 0.016
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 172085 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 171963
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / +1
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 171328 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 171441
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 86.8 bits (183), Expect(2) = 3e-019
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 144687 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 144839
Score = 58.8 bits (122), Expect = 2e-007
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / -2
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 144838 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 144689
Score = 50.6 bits (104), Expect(2) = 2e-008
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 144710 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 144838
Score = 46.0 bits (94), Expect(2) = 3e-019
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 144079 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 144192
Score = 44.1 bits (90), Expect = 0.005
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 144078 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 144191
Score = 42.3 bits (86), Expect = 0.016
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / -3
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 144837 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 144715
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / +2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 144080 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 144193
Score = 29.5 bits (58), Expect(2) = 2e-008
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 105 MVLKYSSVEITPNKGSILSKIIS 173
+ L+YSS E PNK S+L K+ S
Sbjct: 144536 LCLQYSSAETGPNKCSLLPKVTS 144604
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
complete sequence
Length = 36192742
Score = 86.8 bits (183), Expect(2) = 3e-019
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 144687 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 144839
Score = 58.8 bits (122), Expect = 2e-007
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / -1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 144838 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 144689
Score = 50.6 bits (104), Expect(2) = 2e-008
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 144710 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 144838
Score = 46.0 bits (94), Expect(2) = 3e-019
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 144079 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 144192
Score = 44.1 bits (90), Expect = 0.005
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 144078 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 144191
Score = 42.3 bits (86), Expect = 0.016
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 144837 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 144715
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / +2
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 144080 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 144193
Score = 29.5 bits (58), Expect(2) = 2e-008
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 105 MVLKYSSVEITPNKGSILSKIIS 173
+ L+YSS E PNK S+L K+ S
Sbjct: 144536 LCLQYSSAETGPNKCSLLPKVTS 144604
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 86.8 bits (183), Expect(2) = 3e-019
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3 / +1
Query: 162 KIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
+I+ V VR IQ+D+EEKKASFNPRPYFRL I+ LYDL ++D H DG+NFQV
Sbjct: 364297 QILLVAVRIIQRDSEEKKASFNPRPYFRLFISLLYDLISSDLHSDGANFQV 364449
Score = 58.8 bits (122), Expect = 2e-007
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -3 / -3
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEII 164
T KL PS W S+ I +RKYGRGLN+AFFSS S *M+LT T I
Sbjct: 364448 TWKLAPSLWRSEEIRSYSKLIKSRKYGRGLNDAFFSSESL*MILTATNKI 364299
Score = 50.6 bits (104), Expect(2) = 2e-008
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / +3
Query: 185 DHSERC*GKESFI*SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
DHSER * +ES I SP IL YK A+* Y++* P *W *F G
Sbjct: 364320 DHSERF*REESIIQSPAILSAFYKFAI*SYFF*PP**WC*FPG 364448
Score = 46.0 bits (94), Expect(2) = 3e-019
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
S +++CC WW +S + T T FIF +*F +A YG+Q
Sbjct: 363689 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEACSYGAQ 363802
Score = 44.1 bits (90), Expect = 0.005
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1 / +1
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFS 114
*SP +LLLLV+ L +HH+N FHI LI +S LW S
Sbjct: 363688 *SPIRLLLLVECLRSHHNNSKFHISQLILFRSL*LWCS 363801
Score = 42.3 bits (86), Expect = 0.016
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -1 / -1
Query: 312 PEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
P N*+HH G Q * H ANL SM GD*M LS Q+LSE
Sbjct: 364447 PGN*HHHYGGQKK*DHIANL*KAESMAGD*MMLSSLQNLSE 364325
Score = 39.6 bits (80), Expect = 0.11
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3 / +3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
V QIVA ISYF IDS++KLV MVLK
Sbjct: 363690 VPNQIVATGGVSQKSSQQLKISYFPIDSFSKLVAMVLK 363803
Score = 29.5 bits (58), Expect(2) = 2e-008
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 105 MVLKYSSVEITPNKGSILSKIIS 173
+ L+YSS E PNK S+L K+ S
Sbjct: 364146 LCLQYSSAETGPNKCSLLPKVTS 364214
>gb|CF307419.1|CF307419 HDA1--06-K09.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-K09, mRNA sequence
Length = 630
Score = 45.1 bits (92), Expect = 0.002
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / -1
Query: 108 P*PRALHMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
P P+AL+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 135 PVPQALNMNQLRSMKSGVAALAAEKSRQEQLLAQRL 28
Score = 43.7 bits (89), Expect(2) = 0.004
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLK 116
VSEQ+VA ISYFSIDSY+KLV +V+K
Sbjct: 30 VSEQVVAPGGISQQPTQQLQISYFSIDSYSKLVALVVK 143
Score = 42.3 bits (86), Expect = 0.016
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1 / +1
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWF 111
*S SK LLL LS+ SN FH LIH+QS W W+
Sbjct: 28 *SLSK*LLLAGFLSSQRSNSRFHTSQLIHIQSLWHWW 138
Score = 40.9 bits (83), Expect = 0.042
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2 / +2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKARGYGSQ 115
SL A+ CSW SA ATP FI +*FI KA G G +
Sbjct: 29 SL*ASSCSWRDFSAANAATPDFILLN*FIFKACGTGGK 142
Score = 35.4 bits (71), Expect = 1.9
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 109 TITTSFAYESMEKYEIW 59
T TSF YES+EKYEIW
Sbjct: 136 TSATSFEYESIEKYEIW 86
Score = 17.6 bits (32), Expect(2) = 0.004
Identities = 4/5 (80%), Positives = 4/5 (80%)
Frame = +2 / +1
Query: 167 YFCYC 181
Y CYC
Sbjct: 394 YLCYC 408
>gb|CG206578.1|CG206578 TOS0198 TAMU Rice Japonica Nipponbare BAC Library (Hind III)
Oryza sativa (japonica cultivar-group) genomic clone
TOSJNBh006H10h, DNA sequence
Length = 520
Score = 39.1 bits (79), Expect = 0.15
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1 / -3
Query: 1 *SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQS 96
*SP +LLLLV+ L +HH+N FHI LI +S
Sbjct: 98 *SPIRLLLLVECLRSHHNNSKFHISQLILFRS 3
Score = 38.6 bits (78), Expect = 0.20
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2 / -1
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FICKA 97
S +++CC WW +S + T T FIF +*F +A
Sbjct: 97 SPQSDCCYWWSVSEVITTTQNFIFPN*FFFEA 2
>dbj|AP005677.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone OJ1011_C06,
*** SEQUENCING IN PROGRESS ***
Length = 109964
Score = 38.2 bits (77), Expect = 0.28
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1 / +3
Query: 7 PSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
P+K+ + HL++ H+NP + FPLI++ +L + LQ+ IK ++
Sbjct: 96042 PAKISIPNVHLASGHNNPTYVFFPLIYLNQEFLSRQNILQYSLK*IKNIF 96191
>gb|AACV01020274.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020274, whole
genome shotgun sequence
Length = 31997
Score = 38.2 bits (77), Expect = 0.28
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1 / -1
Query: 7 PSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
P+K+ + HL++ H+NP + FPLI++ +L + LQ+ IK ++
Sbjct: 3554 PAKISIPNVHLASGHNNPTYVFFPLIYLNQEFLSRQNILQYSLK*IKNIF 3405
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
OSJNBa0087J09, complete sequence
Length = 153351
Score = 38.2 bits (77), Expect = 0.28
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1 / -2
Query: 7 PSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
P+K+ + HL++ H+NP + FPLI++ +L + LQ+ IK ++
Sbjct: 16307 PAKISIPNVHLASGHNNPTYVFFPLIYLNQEFLSRQNILQYSLK*IKNIF 16158
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 38.2 bits (77), Expect = 0.28
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1 / -1
Query: 7 PSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
P+K+ + HL++ H+NP + FPLI++ +L + LQ+ IK ++
Sbjct: 7776118 PAKISIPNVHLASGHNNPTYVFFPLIYLNQEFLSRQNILQYSLK*IKNIF 7775969
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 38.2 bits (77), Expect = 0.28
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1 / -1
Query: 7 PSKLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
P+K+ + HL++ H+NP + FPLI++ +L + LQ+ IK ++
Sbjct: 17249929 PAKISIPNVHLASGHNNPTYVFFPLIYLNQEFLSRQNILQYSLK*IKNIF 17249780
>gb|AQ289498.1|AQ289498 nbxb0035E10f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0035E10f, DNA
sequence
Length = 523
Score = 36.3 bits (73), Expect = 1.00
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -1 / +2
Query: 90 HMNQWKNMKYGVAVVIAEMIHQEQQFARRL 1
+MNQ ++MK GVA + AE QEQ A+RL
Sbjct: 2 NMNQLRSMKSGVAALAAEKSRQEQLLAQRL 91
Score = 34.1 bits (68), Expect = 4.9
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2 / -2
Query: 2 SLRANCCSWWIISAITTATPYFIFFH*FI 88
SL A+ CSW SA ATP FI +*FI
Sbjct: 90 SL*ASSCSWRDFSAANAATPDFILLN*FI 4
>gb|CB670678.1|CB670678 OSJNEe03O01.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03O01 3', mRNA sequence
Length = 748
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 352 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 459
>gb|CB671007.1|CB671007 OSJNEe04F22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04F22 3', mRNA sequence
Length = 840
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / +3
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 336 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 443
>gb|CB674318.1|CB674318 OSJNEe09E22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09E22 3', mRNA sequence
Length = 802
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / +3
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 429 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 536
>gb|CB682409.1|CB682409 OSJNEf09L08.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09L08 3', mRNA sequence
Length = 862
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 382 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 489
>gb|AACV01012971.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg012971, whole
genome shotgun sequence
Length = 6354
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 3673 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 3780
>ref|XM_493697.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 2204
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / -2
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 1891 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 1784
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / -1
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 1595763 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 1595656
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
clone:P0493C11
Length = 143113
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / -3
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 35357 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 35250
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / -2
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 1575323 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 1575216
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / -3
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 1575323 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 1575216
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 35.9 bits (72), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1 / -1
Query: 13 KLLLLVDHLSNHHSNPIFHIFPLIHMQSSWLWFSST 120
+LLLLV S+H ++H+FPL + S W + S+
Sbjct: 1632186 RLLLLVVRSSSHGKEGLYHLFPLCPLDSLWSTWQSS 1632079
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete
sequence
Length = 194361
Score = 26.7 bits (52), Expect(2) = 3.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 22 LLVDHLSNHHSNPIFHIFPLIHMQ 93
LL DHL HH + ++ L+H Q
Sbjct: 43857 LLEDHLKLHHQQYLGVLYMLLHQQ 43786
Score = 24.9 bits (48), Expect(2) = 3.1
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1 / -2
Query: 76 PLIHMQSSWLWFSSTLQ 126
P+ H + +W+W+ S L+
Sbjct: 43682 PVCHNRCNWIWYRSILK 43632
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence,
complete sequence
Length = 132900
Score = 26.7 bits (52), Expect(2) = 3.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / +3
Query: 22 LLVDHLSNHHSNPIFHIFPLIHMQ 93
LL DHL HH + ++ L+H Q
Sbjct: 369 LLEDHLKLHHQQYLGVLYMLLHQQ 440
Score = 24.9 bits (48), Expect(2) = 3.2
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 76 PLIHMQSSWLWFSSTLQ 126
P+ H + +W+W+ S L+
Sbjct: 544 PVCHNRCNWIWYRSILK 594
>gb|AACV01021990.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021990, whole
genome shotgun sequence
Length = 19258
Score = 26.7 bits (52), Expect(2) = 3.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 22 LLVDHLSNHHSNPIFHIFPLIHMQ 93
LL DHL HH + ++ L+H Q
Sbjct: 2641 LLEDHLKLHHQQYLGVLYMLLHQQ 2570
Score = 24.9 bits (48), Expect(2) = 3.7
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1 / -2
Query: 76 PLIHMQSSWLWFSSTLQ 126
P+ H + +W+W+ S L+
Sbjct: 2466 PVCHNRCNWIWYRSILK 2416
>ref|NM_197512.1| Oryza sativa (japonica cultivar-group) putative polyamine oxidase
(OSJNBa0053C23.16), mRNA
Length = 5589
Score = 26.7 bits (52), Expect(2) = 4.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 22 LLVDHLSNHHSNPIFHIFPLIHMQ 93
LL DHL HH + ++ L+H Q
Sbjct: 3676 LLEDHLKLHHQQYLGVLYMLLHQQ 3605
Score = 24.9 bits (48), Expect(2) = 4.0
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1 / -1
Query: 76 PLIHMQSSWLWFSSTLQ 126
P+ H + +W+W+ S L+
Sbjct: 3501 PVCHNRCNWIWYRSILK 3451
>dbj|AK065403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012B02, full
insert sequence
Length = 3624
Score = 26.7 bits (52), Expect(2) = 4.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 22 LLVDHLSNHHSNPIFHIFPLIHMQ 93
LL DHL HH + ++ L+H Q
Sbjct: 3367 LLEDHLKLHHQQYLGVLYMLLHQQ 3296
Score = 24.9 bits (48), Expect(2) = 4.1
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +1 / -1
Query: 76 PLIHMQSSWLWFSSTLQ 126
P+ H + +W+W+ S L+
Sbjct: 3192 PVCHNRCNWIWYRSILK 3142
>ref|NT_107196.1| Oryza sativa (japonica cultivar-group)
Length = 695877
Score = 32.2 bits (64), Expect(2) = 9.0
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 258 WLYDLTTTDGHH 293
WL+D TTTDGHH
Sbjct: 656905 WLHDSTTTDGHH 656940
Score = 27.6 bits (54), Expect(2) = 9.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1 / +1
Query: 4 SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQSS 99
SP+ ++ + LS HH+N + ++FP+I S+
Sbjct: 132772 SPTNVV*IHLQLSLHHTNLLVNLFPMITPSST 132867
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,817,041,732
Number of Sequences: 438736
Number of extensions: 21815010
Number of successful extensions: 156057
Number of sequences better than 10.0: 59
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 43627396272
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)