TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF11h01.xg.2.1
(328 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AACV01013347.1| Oryza sativa (japonica cultivar-group) c... 118 1e-052
dbj|AP003513.2| Oryza sativa (japonica cultivar-group) geno... 118 6e-052
dbj|AP003569.3| Oryza sativa (japonica cultivar-group) geno... 118 7e-052
dbj|AK072229.1| Oryza sativa (japonica cultivar-group) cDNA... 204 4e-051
ref|XM_467764.1| Oryza sativa (japonica cultivar-group), mRNA 204 4e-051
ref|XM_506970.1| PREDICTED Oryza sativa (japonica cultivar-... 204 4e-051
dbj|AK108072.1| Oryza sativa (japonica cultivar-group) cDNA... 202 9e-051
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 118 2e-050
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 118 3e-050
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 118 1e-049
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 118 1e-049
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 106 5e-046
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 106 5e-046
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 106 5e-046
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 106 6e-046
dbj|AP004114.3| Oryza sativa (japonica cultivar-group) geno... 106 6e-046
gb|AACV01005404.1| Oryza sativa (japonica cultivar-group) c... 106 6e-046
gb|AACV01004388.1| Oryza sativa (japonica cultivar-group) c... 86 1e-030
dbj|AK073015.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-030
dbj|AP005630.3| Oryza sativa (japonica cultivar-group) geno... 86 1e-029
dbj|AP004773.1| Oryza sativa (japonica cultivar-group) chro... 86 1e-029
dbj|AK119405.1| Oryza sativa (japonica cultivar-group) cDNA... 90 2e-029
dbj|AK068531.1| Oryza sativa (japonica cultivar-group) cDNA... 87 3e-029
dbj|AK073839.1| Oryza sativa (japonica cultivar-group) cDNA... 90 1e-028
ref|XM_481635.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-028
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 86 4e-028
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 86 4e-028
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 86 4e-028
gb|AC120529.3| Oryza sativa (japonica cultivar-group) chrom... 86 4e-028
gb|AACV01006898.1| Oryza sativa (japonica cultivar-group) c... 86 4e-028
dbj|AK100641.1| Oryza sativa (japonica cultivar-group) cDNA... 90 5e-028
ref|XM_468666.1| Oryza sativa (japonica cultivar-group), mRNA 86 5e-028
dbj|AK100228.1| Oryza sativa (japonica cultivar-group) cDNA... 86 5e-028
ref|NM_196050.1| Oryza sativa (japonica cultivar-group) hyp... 84 7e-026
dbj|AK061910.1| Oryza sativa (japonica cultivar-group) cDNA... 84 7e-026
gb|CV731236.1|CV731236 FLO--05-C22.b1 Rice flower lambda ph... 72 2e-025
dbj|AK066204.1| Oryza sativa (japonica cultivar-group) cDNA... 81 6e-025
gb|AQ872381.1|AQ872381 nbeb0048C10r CUGI Rice BAC Library (... 116 8e-025
gb|AACV01020445.1| Oryza sativa (japonica cultivar-group) c... 77 8e-025
dbj|AP005567.3| Oryza sativa (japonica cultivar-group) geno... 77 4e-024
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 77 4e-024
gb|AACV01018116.1| Oryza sativa (japonica cultivar-group) c... 79 1e-023
gb|AACV01020262.1| Oryza sativa (japonica cultivar-group) c... 81 2e-023
dbj|AP003867.1| Oryza sativa (japonica cultivar-group) chro... 79 4e-023
dbj|AP003884.2| Oryza sativa (japonica cultivar-group) geno... 79 4e-023
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 77 4e-023
dbj|AP004759.3| Oryza sativa (japonica cultivar-group) geno... 79 5e-023
dbj|AP005392.3| Oryza sativa (japonica cultivar-group) geno... 81 5e-023
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 81 6e-023
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 82 8e-023
ref|NT_107200.1| Oryza sativa (japonica cultivar-group) 82 9e-023
emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromoso... 82 9e-023
emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromoso... 82 9e-023
gb|AACV01010539.1| Oryza sativa (japonica cultivar-group) c... 82 9e-023
dbj|AK067760.1| Oryza sativa (japonica cultivar-group) cDNA... 82 9e-023
ref|XM_474034.1| Oryza sativa (japonica cultivar-group), p... 82 9e-023
gb|CB673762.1|CB673762 OSJNEe08H08.r OSJNEe Oryza sativa (j... 82 1e-022
dbj|AK069572.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-022
ref|XM_506807.1| PREDICTED Oryza sativa (japonica cultivar-... 97 2e-022
dbj|AK102664.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-022
ref|XM_465817.1| Oryza sativa (japonica cultivar-group), mRNA 97 2e-022
gb|CB643031.1|CB643031 OSJNEb03I06.r OSJNEb Oryza sativa (j... 97 2e-022
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 81 3e-022
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 81 1e-021
gb|CA998815.1|CA998815 S345M_C07 Rice cold stress germinati... 76 1e-021
gb|AACV01014968.1| Oryza sativa (japonica cultivar-group) c... 73 3e-021
gb|AACV01018784.1| Oryza sativa (japonica cultivar-group) c... 73 4e-021
dbj|AK065485.1| Oryza sativa (japonica cultivar-group) cDNA... 76 4e-021
>gb|AACV01013347.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013347, whole
genome shotgun sequence
Length = 24369
Score = 118 bits (252), Expect(2) = 1e-052
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY KYLNFTQ IV++RF+P ACAWAYGVNV+DLE WRRDGCTELFHQYMEM
Sbjct: 2345 RYSKYLNFTQAIVQERFDPGACAWAYGVNVYDLEAWRRDGCTELFHQYMEM 2497
Score = 116 bits (248), Expect(2) = 1e-052
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / +3
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 3558 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 3713
Score = 85.8 bits (181), Expect(2) = 6e-031
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +1 / -1
Query: 166 IY*WNNSVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLYL 312
+Y*WN+SVQPS RH SRS T TPYA A A G NRS TM CVKLRY LYL
Sbjct: 2490 MY*WNSSVQPSLRHASRSYTLTPYAQAHAPGSNRSCTMACVKLRYLLYL 2344
Score = 80.8 bits (170), Expect(2) = 2e-029
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -2 / +1
Query: 312 EVQEVSQLHAAHCAGSIQSQCLCMGIWGKCVRP*DMAAGWLHRIVPSVYGN 160
E+ +VSQLHA H AG+++S +C+GIWG+CV * MA GWLH VPSV+GN
Sbjct: 2344 EI*QVSQLHAGHRAGAVRSWRMCLGIWGQCV*S*GMAKGWLHGAVPSVHGN 2496
Score = 80.3 bits (169), Expect(2) = 1e-028
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +3 / -3
Query: 159 HFHILMEQFCATIPPPCLKVEHIYPICPCTGIGIESIPHNGLREVEILPV 308
HFH+LMEQ A IP PCLK+ HI PICP T IE + H+GLREVEIL +
Sbjct: 2497 HFHVLMEQLRAAIPSPCLKIIHIDPICPSTCARIEPLLHDGLREVEILAI 2348
Score = 76.2 bits (160), Expect(2) = 6e-031
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +1 / -3
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVG 135
TAA I SGLMLGL PRPITCHDLSSG VLP* ISPA R DVG
Sbjct: 3712 TAAPAITSGLMLGLYPRPITCHDLSSGFVLP*NVISPAGRTDVG 3581
Score = 76.2 bits (160), Expect(2) = 2e-029
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -2 / +2
Query: 177 PSVYGNE*GWRAVGSYIHSNSWADVLLRQYQATG*VMACNGSWL*SKHQP*GNP*CC 7
P ++ E*GW A+GS+I S WAD +L QY+A +MACNG W+*SKHQ *G CC
Sbjct: 3539 PIIFMAE*GWCALGSHICSTCWADDILWQYKAA*QIMACNGPWV*SKHQS*GYRWCC 3709
Score = 73.9 bits (155), Expect(2) = 1e-028
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3 / -2
Query: 3 HCSTTDCLRADAWIIAKTHYMP*LIQWLGIAVKGHQPSC*NGCRIPQLAILI 158
H ST+D LR DAWII K HYMP* ++ L IA++ HQPS *N C IP+ ILI
Sbjct: 3713 HSSTSDNLRTDAWIIPKAHYMP*FVKRLCIAIECHQPSR*NRCGIPKHTILI 3558
Score = 72.5 bits (152), Expect(2) = 2e-022
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = +2 / -1
Query: 8 QHYGLPQG*CLDYSQDPLHAMTYPVAWYCRKRTSAQLLEWM*DPTARHPHS 160
QH PQ *CLDY+Q PLHAM A YC + +SAQ +E M DP A HPHS
Sbjct: 3708 QHQR*PQD*CLDYTQGPLHAMICQAALYCHRMSSAQQVEQMWDPKAHHPHS 3556
Score = 60.6 bits (126), Expect(2) = 2e-022
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +2 / -2
Query: 161 FPYTDGTILCNHPAAMSQGRTHLPHMPMHRHWD*IDPAQW 280
FP TDGT C+HP AM Q TH PHMP H D PA+W
Sbjct: 2495 FPCTDGTAPCSHPFAMPQDHTH*PHMPKHMRQDRTAPARW 2376
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0690H04
Length = 137319
Score = 118 bits (252), Expect(2) = 6e-052
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -3 / -2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY KYLNFTQ IV++RF+P ACAWAYGVNV+DLE WRRDGCTELFHQYMEM
Sbjct: 134534 RYSKYLNFTQAIVQERFDPGACAWAYGVNVYDLEAWRRDGCTELFHQYMEM 134382
Score = 116 bits (248), Expect(2) = 6e-052
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / -3
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 133321 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 133166
Score = 85.8 bits (181), Expect(2) = 3e-030
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +1 / +1
Query: 166 IY*WNNSVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLYL 312
+Y*WN+SVQPS RH SRS T TPYA A A G NRS TM CVKLRY LYL
Sbjct: 134389 MY*WNSSVQPSLRHASRSYTLTPYAQAHAPGSNRSCTMACVKLRYLLYL 134535
Score = 80.8 bits (170), Expect(2) = 1e-028
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -2 / -1
Query: 312 EVQEVSQLHAAHCAGSIQSQCLCMGIWGKCVRP*DMAAGWLHRIVPSVYGN 160
E+ +VSQLHA H AG+++S +C+GIWG+CV * MA GWLH VPSV+GN
Sbjct: 134535 EI*QVSQLHAGHRAGAVRSWRMCLGIWGQCV*S*GMAKGWLHGAVPSVHGN 134383
Score = 80.3 bits (169), Expect(2) = 6e-028
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +3 / +3
Query: 159 HFHILMEQFCATIPPPCLKVEHIYPICPCTGIGIESIPHNGLREVEILPV 308
HFH+LMEQ A IP PCLK+ HI PICP T IE + H+GLREVEIL +
Sbjct: 134382 HFHVLMEQLRAAIPSPCLKIIHIDPICPSTCARIEPLLHDGLREVEILAI 134531
Score = 76.2 bits (160), Expect(2) = 3e-030
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVG 135
TAA I SGLMLGL PRPITCHDLSSG VLP* ISPA R DVG
Sbjct: 133167 TAAPAITSGLMLGLYPRPITCHDLSSGFVLP*NVISPAGRTDVG 133298
Score = 76.2 bits (160), Expect(2) = 1e-028
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -2 / -2
Query: 177 PSVYGNE*GWRAVGSYIHSNSWADVLLRQYQATG*VMACNGSWL*SKHQP*GNP*CC 7
P ++ E*GW A+GS+I S WAD +L QY+A +MACNG W+*SKHQ *G CC
Sbjct: 133340 PIIFMAE*GWCALGSHICSTCWADDILWQYKAA*QIMACNGPWV*SKHQS*GYRWCC 133170
Score = 73.9 bits (155), Expect(2) = 6e-028
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3 / +2
Query: 3 HCSTTDCLRADAWIIAKTHYMP*LIQWLGIAVKGHQPSC*NGCRIPQLAILI 158
H ST+D LR DAWII K HYMP* ++ L IA++ HQPS *N C IP+ ILI
Sbjct: 133166 HSSTSDNLRTDAWIIPKAHYMP*FVKRLCIAIECHQPSR*NRCGIPKHTILI 133321
Score = 72.5 bits (152), Expect(2) = 1e-021
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = +2 / +1
Query: 8 QHYGLPQG*CLDYSQDPLHAMTYPVAWYCRKRTSAQLLEWM*DPTARHPHS 160
QH PQ *CLDY+Q PLHAM A YC + +SAQ +E M DP A HPHS
Sbjct: 133171 QHQR*PQD*CLDYTQGPLHAMICQAALYCHRMSSAQQVEQMWDPKAHHPHS 133323
Score = 60.6 bits (126), Expect(2) = 1e-021
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +2 / +2
Query: 161 FPYTDGTILCNHPAAMSQGRTHLPHMPMHRHWD*IDPAQW 280
FP TDGT C+HP AM Q TH PHMP H D PA+W
Sbjct: 134384 FPCTDGTAPCSHPFAMPQDHTH*PHMPKHMRQDRTAPARW 134503
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0425F05
Length = 162858
Score = 118 bits (252), Expect(2) = 7e-052
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY KYLNFTQ IV++RF+P ACAWAYGVNV+DLE WRRDGCTELFHQYMEM
Sbjct: 52284 RYSKYLNFTQAIVQERFDPGACAWAYGVNVYDLEAWRRDGCTELFHQYMEM 52132
Score = 116 bits (248), Expect(2) = 7e-052
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / -2
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 51071 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 50916
Score = 85.8 bits (181), Expect(2) = 4e-030
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +1 / +2
Query: 166 IY*WNNSVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLYL 312
+Y*WN+SVQPS RH SRS T TPYA A A G NRS TM CVKLRY LYL
Sbjct: 52139 MY*WNSSVQPSLRHASRSYTLTPYAQAHAPGSNRSCTMACVKLRYLLYL 52285
Score = 80.8 bits (170), Expect(2) = 1e-028
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -2 / -3
Query: 312 EVQEVSQLHAAHCAGSIQSQCLCMGIWGKCVRP*DMAAGWLHRIVPSVYGN 160
E+ +VSQLHA H AG+++S +C+GIWG+CV * MA GWLH VPSV+GN
Sbjct: 52285 EI*QVSQLHAGHRAGAVRSWRMCLGIWGQCV*S*GMAKGWLHGAVPSVHGN 52133
Score = 80.3 bits (169), Expect(2) = 8e-028
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +3 / +1
Query: 159 HFHILMEQFCATIPPPCLKVEHIYPICPCTGIGIESIPHNGLREVEILPV 308
HFH+LMEQ A IP PCLK+ HI PICP T IE + H+GLREVEIL +
Sbjct: 52132 HFHVLMEQLRAAIPSPCLKIIHIDPICPSTCARIEPLLHDGLREVEILAI 52281
Score = 76.2 bits (160), Expect(2) = 1e-028
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -2 / -1
Query: 177 PSVYGNE*GWRAVGSYIHSNSWADVLLRQYQATG*VMACNGSWL*SKHQP*GNP*CC 7
P ++ E*GW A+GS+I S WAD +L QY+A +MACNG W+*SKHQ *G CC
Sbjct: 51090 PIIFMAE*GWCALGSHICSTCWADDILWQYKAA*QIMACNGPWV*SKHQS*GYRWCC 50920
Score = 76.2 bits (160), Expect(2) = 4e-030
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +1 / +1
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVG 135
TAA I SGLMLGL PRPITCHDLSSG VLP* ISPA R DVG
Sbjct: 50917 TAAPAITSGLMLGLYPRPITCHDLSSGFVLP*NVISPAGRTDVG 51048
Score = 73.9 bits (155), Expect(2) = 8e-028
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3 / +3
Query: 3 HCSTTDCLRADAWIIAKTHYMP*LIQWLGIAVKGHQPSC*NGCRIPQLAILI 158
H ST+D LR DAWII K HYMP* ++ L IA++ HQPS *N C IP+ ILI
Sbjct: 50916 HSSTSDNLRTDAWIIPKAHYMP*FVKRLCIAIECHQPSR*NRCGIPKHTILI 51071
Score = 72.5 bits (152), Expect(2) = 1e-021
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = +2 / +2
Query: 8 QHYGLPQG*CLDYSQDPLHAMTYPVAWYCRKRTSAQLLEWM*DPTARHPHS 160
QH PQ *CLDY+Q PLHAM A YC + +SAQ +E M DP A HPHS
Sbjct: 50921 QHQR*PQD*CLDYTQGPLHAMICQAALYCHRMSSAQQVEQMWDPKAHHPHS 51073
Score = 60.6 bits (126), Expect(2) = 1e-021
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +2 / +3
Query: 161 FPYTDGTILCNHPAAMSQGRTHLPHMPMHRHWD*IDPAQW 280
FP TDGT C+HP AM Q TH PHMP H D PA+W
Sbjct: 52134 FPCTDGTAPCSHPFAMPQDHTH*PHMPKHMRQDRTAPARW 52253
>dbj|AK072229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169N10, full
insert sequence
Length = 1756
Score = 204 bits (439), Expect = 4e-051
Identities = 74/103 (71%), Positives = 88/103 (85%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELWDP 132
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEMNE+G LWDP
Sbjct: 1125 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEMNENGTLWDP 1304
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 1305 ASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 1433
Score = 104 bits (221), Expect = 4e-021
Identities = 54/102 (52%), Positives = 58/102 (56%)
Frame = +1 / -1
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVGXXXXXXXXXXIY*WNN 183
TAA ++SGLM GL P PITCHDLSSGLVLP* +SPA R D G + WN
Sbjct: 1432 TAAPLMSSGLMCGLYPSPITCHDLSSGLVLP*NVMSPAGRTDAGSHSVPFSFISMSWWNR 1253
Query: 184 SVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLY 309
V SRR RSNT P A A GLNRS T G KL Y
Sbjct: 1252 WVHWSRRQAWRSNTLRP*DQAHARGLNRSCTAGSEKLMCLPY 1127
>ref|XM_467764.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1642
Score = 204 bits (439), Expect = 4e-051
Identities = 74/103 (71%), Positives = 88/103 (85%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELWDP 132
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEMNE+G LWDP
Sbjct: 1103 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEMNENGTLWDP 1282
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 1283 ASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 1411
Score = 104 bits (221), Expect = 4e-021
Identities = 54/102 (52%), Positives = 58/102 (56%)
Frame = +1 / -2
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVGXXXXXXXXXXIY*WNN 183
TAA ++SGLM GL P PITCHDLSSGLVLP* +SPA R D G + WN
Sbjct: 1410 TAAPLMSSGLMCGLYPSPITCHDLSSGLVLP*NVMSPAGRTDAGSHSVPFSFISMSWWNR 1231
Query: 184 SVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLY 309
V SRR RSNT P A A GLNRS T G KL Y
Sbjct: 1230 WVHWSRRQAWRSNTLRP*DQAHARGLNRSCTAGSEKLMCLPY 1105
>ref|XM_506970.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1118_G04.19 mRNA
Length = 1758
Score = 204 bits (439), Expect = 4e-051
Identities = 74/103 (71%), Positives = 88/103 (85%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELWDP 132
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEMNE+G LWDP
Sbjct: 1127 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEMNENGTLWDP 1306
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 1307 ASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 1435
Score = 104 bits (221), Expect = 4e-021
Identities = 54/102 (52%), Positives = 58/102 (56%)
Frame = +1 / -1
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVGXXXXXXXXXXIY*WNN 183
TAA ++SGLM GL P PITCHDLSSGLVLP* +SPA R D G + WN
Sbjct: 1434 TAAPLMSSGLMCGLYPSPITCHDLSSGLVLP*NVMSPAGRTDAGSHSVPFSFISMSWWNR 1255
Query: 184 SVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLY 309
V SRR RSNT P A A GLNRS T G KL Y
Sbjct: 1254 WVHWSRRQAWRSNTLRP*DQAHARGLNRSCTAGSEKLMCLPY 1129
>dbj|AK108072.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-C08, full
insert sequence
Length = 1642
Score = 202 bits (436), Expect = 9e-051
Identities = 74/103 (71%), Positives = 87/103 (84%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELWDP 132
RY K++NF P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEMNE+G LWDP
Sbjct: 1103 RYGKHINFFDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEMNENGTLWDP 1282
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 1283 ASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 1411
Score = 104 bits (221), Expect = 4e-021
Identities = 54/102 (52%), Positives = 58/102 (56%)
Frame = +1 / -2
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVGXXXXXXXXXXIY*WNN 183
TAA ++SGLM GL P PITCHDLSSGLVLP* +SPA R D G + WN
Sbjct: 1410 TAAPLMSSGLMCGLYPSPITCHDLSSGLVLP*NVMSPAGRTDAGSHSVPFSFISMSWWNR 1231
Query: 184 SVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLY 309
V SRR RSNT P A A GLNRS T G KL Y
Sbjct: 1230 WVHWSRRQAWRSNTLRP*DQAHARGLNRSCTAGSKKLMCLPY 1105
>ref|NT_079873.2| Oryza sativa (japonica cultivar-group)
Length = 5116111
Score = 118 bits (252), Expect(2) = 2e-050
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -3 / -3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY KYLNFTQ IV++RF+P ACAWAYGVNV+DLE WRRDGCTELFHQYMEM
Sbjct: 2309738 RYSKYLNFTQAIVQERFDPGACAWAYGVNVYDLEAWRRDGCTELFHQYMEM 2309586
Score = 116 bits (248), Expect(2) = 2e-050
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / -1
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 2308525 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 2308370
Score = 85.8 bits (181), Expect(2) = 1e-028
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +1 / +1
Query: 166 IY*WNNSVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLYL 312
+Y*WN+SVQPS RH SRS T TPYA A A G NRS TM CVKLRY LYL
Sbjct: 2309593 MY*WNSSVQPSLRHASRSYTLTPYAQAHAPGSNRSCTMACVKLRYLLYL 2309739
Score = 80.8 bits (170), Expect(2) = 3e-027
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -2 / -2
Query: 312 EVQEVSQLHAAHCAGSIQSQCLCMGIWGKCVRP*DMAAGWLHRIVPSVYGN 160
E+ +VSQLHA H AG+++S +C+GIWG+CV * MA GWLH VPSV+GN
Sbjct: 2309739 EI*QVSQLHAGHRAGAVRSWRMCLGIWGQCV*S*GMAKGWLHGAVPSVHGN 2309587
Score = 80.3 bits (169), Expect(2) = 2e-026
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +3 / +3
Query: 159 HFHILMEQFCATIPPPCLKVEHIYPICPCTGIGIESIPHNGLREVEILPV 308
HFH+LMEQ A IP PCLK+ HI PICP T IE + H+GLREVEIL +
Sbjct: 2309586 HFHVLMEQLRAAIPSPCLKIIHIDPICPSTCARIEPLLHDGLREVEILAI 2309735
Score = 76.2 bits (160), Expect(2) = 3e-027
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -2 / -3
Query: 177 PSVYGNE*GWRAVGSYIHSNSWADVLLRQYQATG*VMACNGSWL*SKHQP*GNP*CC 7
P ++ E*GW A+GS+I S WAD +L QY+A +MACNG W+*SKHQ *G CC
Sbjct: 2308544 PIIFMAE*GWCALGSHICSTCWADDILWQYKAA*QIMACNGPWV*SKHQS*GYRWCC 2308374
Score = 76.2 bits (160), Expect(2) = 1e-028
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVG 135
TAA I SGLMLGL PRPITCHDLSSG VLP* ISPA R DVG
Sbjct: 2308371 TAAPAITSGLMLGLYPRPITCHDLSSGFVLP*NVISPAGRTDVG 2308502
Score = 73.9 bits (155), Expect(2) = 2e-026
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3 / +2
Query: 3 HCSTTDCLRADAWIIAKTHYMP*LIQWLGIAVKGHQPSC*NGCRIPQLAILI 158
H ST+D LR DAWII K HYMP* ++ L IA++ HQPS *N C IP+ ILI
Sbjct: 2308370 HSSTSDNLRTDAWIIPKAHYMP*FVKRLCIAIECHQPSR*NRCGIPKHTILI 2308525
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 118 bits (252), Expect(2) = 3e-050
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -3 / -3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY KYLNFTQ IV++RF+P ACAWAYGVNV+DLE WRRDGCTELFHQYMEM
Sbjct: 6548110 RYSKYLNFTQAIVQERFDPGACAWAYGVNVYDLEAWRRDGCTELFHQYMEM 6547958
Score = 116 bits (248), Expect(2) = 3e-050
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / -1
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 6546897 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 6546742
Score = 85.8 bits (181), Expect(2) = 2e-028
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +1 / +3
Query: 166 IY*WNNSVQPSRRHVSRSNTFTPYAHAQALGLNRSRTMGCVKLRYFLYL 312
+Y*WN+SVQPS RH SRS T TPYA A A G NRS TM CVKLRY LYL
Sbjct: 6547965 MY*WNSSVQPSLRHASRSYTLTPYAQAHAPGSNRSCTMACVKLRYLLYL 6548111
Score = 80.8 bits (170), Expect(2) = 6e-027
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -2 / -2
Query: 312 EVQEVSQLHAAHCAGSIQSQCLCMGIWGKCVRP*DMAAGWLHRIVPSVYGN 160
E+ +VSQLHA H AG+++S +C+GIWG+CV * MA GWLH VPSV+GN
Sbjct: 6548111 EI*QVSQLHAGHRAGAVRSWRMCLGIWGQCV*S*GMAKGWLHGAVPSVHGN 6547959
Score = 80.3 bits (169), Expect(2) = 4e-026
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +3 / +2
Query: 159 HFHILMEQFCATIPPPCLKVEHIYPICPCTGIGIESIPHNGLREVEILPV 308
HFH+LMEQ A IP PCLK+ HI PICP T IE + H+GLREVEIL +
Sbjct: 6547958 HFHVLMEQLRAAIPSPCLKIIHIDPICPSTCARIEPLLHDGLREVEILAI 6548107
Score = 76.2 bits (160), Expect(2) = 2e-028
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +1 / +2
Query: 4 TAALRIASGLMLGL*PRPITCHDLSSGLVLP*KDISPAVRMDVG 135
TAA I SGLMLGL PRPITCHDLSSG VLP* ISPA R DVG
Sbjct: 6546743 TAAPAITSGLMLGLYPRPITCHDLSSGFVLP*NVISPAGRTDVG 6546874
Score = 76.2 bits (160), Expect(2) = 6e-027
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -2 / -3
Query: 177 PSVYGNE*GWRAVGSYIHSNSWADVLLRQYQATG*VMACNGSWL*SKHQP*GNP*CC 7
P ++ E*GW A+GS+I S WAD +L QY+A +MACNG W+*SKHQ *G CC
Sbjct: 6546916 PIIFMAE*GWCALGSHICSTCWADDILWQYKAA*QIMACNGPWV*SKHQS*GYRWCC 6546746
Score = 73.9 bits (155), Expect(2) = 4e-026
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3 / +1
Query: 3 HCSTTDCLRADAWIIAKTHYMP*LIQWLGIAVKGHQPSC*NGCRIPQLAILI 158
H ST+D LR DAWII K HYMP* ++ L IA++ HQPS *N C IP+ ILI
Sbjct: 6546742 HSSTSDNLRTDAWIIPKAHYMP*FVKRLCIAIECHQPSR*NRCGIPKHTILI 6546897
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 118 bits (252), Expect(2) = 1e-049
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY KYLNFTQ IV++RF+P ACAWAYGVNV+DLE WRRDGCTELFHQYMEM
Sbjct: 6548110 RYSKYLNFTQAIVQERFDPGACAWAYGVNVYDLEAWRRDGCTELFHQYMEM 6547958
Score = 116 bits (248), Expect(2) = 1e-049
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / -2
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 6546897 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 6546742
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 118 bits (252), Expect(2) = 1e-049
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -3 / -2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY KYLNFTQ IV++RF+P ACAWAYGVNV+DLE WRRDGCTELFHQYMEM
Sbjct: 6618158 RYSKYLNFTQAIVQERFDPGACAWAYGVNVYDLEAWRRDGCTELFHQYMEM 6618006
Score = 116 bits (248), Expect(2) = 1e-049
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / -3
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 6616945 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 6616790
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 106 bits (227), Expect(2) = 5e-046
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = -3 / +1
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NE+G LWDP S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 31328992 NENGTLWDPASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 31329147
Score = 100 bits (212), Expect(2) = 5e-046
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEM
Sbjct: 31328742 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEM 31328894
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 106 bits (227), Expect(2) = 5e-046
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = -3 / +3
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NE+G LWDP S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 31304589 NENGTLWDPASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 31304744
Score = 100 bits (212), Expect(2) = 5e-046
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEM
Sbjct: 31304339 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEM 31304491
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 106 bits (227), Expect(2) = 5e-046
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = -3 / +2
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NE+G LWDP S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 17875928 NENGTLWDPASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 17876083
Score = 100 bits (212), Expect(2) = 5e-046
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -3 / +1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEM
Sbjct: 17875678 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEM 17875830
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 106 bits (227), Expect(2) = 6e-046
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = -3 / +1
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NE+G LWDP S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 6469588 NENGTLWDPASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 6469743
Score = 100 bits (212), Expect(2) = 6e-046
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEM
Sbjct: 6469338 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEM 6469490
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1118_G04
Length = 134464
Score = 106 bits (227), Expect(2) = 6e-046
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = -3 / +3
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NE+G LWDP S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 74457 NENGTLWDPASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 74612
Score = 100 bits (212), Expect(2) = 6e-046
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEM
Sbjct: 74207 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEM 74359
>gb|AACV01005404.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005404, whole
genome shotgun sequence
Length = 35676
Score = 106 bits (227), Expect(2) = 6e-046
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = -3 / -2
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NE+G LWDP S+L AGLM+FYGNT+PLDKSWHVMGLGYNP I PE I+ AAV
Sbjct: 10202 NENGTLWDPASVLPAGLMTFYGNTRPLDKSWHVMGLGYNPHIRPEDIKGAAV 10047
Score = 100 bits (212), Expect(2) = 6e-046
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
RY K++NF+ P V++RFNP ACAW+YG+NVFDL+ WRRD CT+ FHQ MEM
Sbjct: 10452 RYGKHINFSDPAVQERFNPRACAWSYGLNVFDLQAWRRDQCTQRFHQLMEM 10300
>gb|AACV01004388.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004388, whole
genome shotgun sequence
Length = 12689
Score = 85.8 bits (181), Expect(2) = 1e-030
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQY 168
RY +Y+NF+ P+++++FNPNAC WAYG+N FDL++WRR+ TE +H +
Sbjct: 7142 RYWQYMNFSHPLIKEKFNPNACGWAYGMNFFDLDSWRREKSTEQYHYW 6999
Score = 74.4 bits (156), Expect(2) = 1e-030
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3 / -1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY TKPL+KSWHV+GLGYNPSIS E IR+AAV
Sbjct: 6563 LPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAV 6444
>dbj|AK073015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149G11, full
insert sequence
Length = 2482
Score = 90.0 bits (190), Expect(2) = 3e-030
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = -3 / +1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ KYLNF+ P + F+PNAC WAYG+N+FDL+ W++ T ++H++ MNED LW
Sbjct: 1744 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSMNEDRVLW 1917
Score = 64.3 bits (134), Expect(2) = 3e-030
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 1930 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 2049
>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0021C10
Length = 119527
Score = 85.8 bits (181), Expect(2) = 1e-029
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = -3 / -2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQY 168
RY +Y+NF+ P+++++FNPNAC WAYG+N FDL++WRR+ TE +H +
Sbjct: 16194 RYWQYMNFSHPLIKEKFNPNACGWAYGMNFFDLDSWRREKSTEQYHYW 16051
Score = 74.4 bits (156), Expect(2) = 1e-029
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3 / -2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY TKPL+KSWHV+GLGYNPSIS E IR+AAV
Sbjct: 15615 LPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAV 15496
>dbj|AP004773.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0416F07, ***
SEQUENCING IN PROGRESS ***
Length = 136073
Score = 85.8 bits (181), Expect(2) = 1e-029
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = -3 / +1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQY 168
RY +Y+NF+ P+++++FNPNAC WAYG+N FDL++WRR+ TE +H +
Sbjct: 38269 RYWQYMNFSHPLIKEKFNPNACGWAYGMNFFDLDSWRREKSTEQYHYW 38412
Score = 74.4 bits (156), Expect(2) = 1e-029
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3 / +1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY TKPL+KSWHV+GLGYNPSIS E IR+AAV
Sbjct: 38848 LPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAV 38967
>dbj|AK119405.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E10, full
insert sequence
Length = 2494
Score = 89.5 bits (189), Expect(2) = 2e-029
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ KYLNF+ P + F+PNAC WAYG+N+FDL W++ T ++H++ MNED LW
Sbjct: 1701 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLNEWKKKDITGIYHRWQNMNEDRVLW 1874
Score = 62.0 bits (129), Expect(2) = 2e-029
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 1887 LPHGLLTFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 2006
>dbj|AK068531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D09, full
insert sequence
Length = 2206
Score = 86.8 bits (183), Expect(2) = 3e-029
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -3 / +2
Query: 308 YRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
+ KYLNF+ P + F+PNAC WAYG+N+FDLE W++ T ++H++ MNE+ LW
Sbjct: 1463 FDKYLNFSNPNIAQNFDPNACGWAYGMNMFDLEEWKKKDITGIYHKWQNMNENRLLW 1633
Score = 64.3 bits (134), Expect(2) = 3e-029
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / +2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 1646 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIERSEIDNAAV 1765
>dbj|AK073839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070B13, full
insert sequence
Length = 2371
Score = 90.0 bits (190), Expect(2) = 1e-028
Identities = 28/58 (48%), Positives = 43/58 (74%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ +YLNF+ P++ F+P+AC WA+G+NVFDL WRR TE++H + ++N+D LW
Sbjct: 1560 RFDRYLNFSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKLNQDRLLW 1733
Score = 58.8 bits (122), Expect(2) = 1e-028
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PL++SWHV+GLGYNP +S I AAV
Sbjct: 1746 LPPGLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAV 1865
>ref|XM_481635.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2371
Score = 90.0 bits (190), Expect(2) = 1e-028
Identities = 28/58 (48%), Positives = 43/58 (74%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ +YLNF+ P++ F+P+AC WA+G+NVFDL WRR TE++H + ++N+D LW
Sbjct: 1560 RFDRYLNFSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKLNQDRLLW 1733
Score = 58.8 bits (122), Expect(2) = 1e-028
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PL++SWHV+GLGYNP +S I AAV
Sbjct: 1746 LPPGLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAV 1865
>ref|NT_107179.1| Oryza sativa (japonica cultivar-group)
Length = 4877845
Score = 85.8 bits (181), Expect(2) = 4e-028
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = -3 / -2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQY 168
RY +Y+NF+ P+++++FNPNAC WAYG+N FDL++WRR+ TE +H +
Sbjct: 3722367 RYWQYMNFSHPLIKEKFNPNACGWAYGMNFFDLDSWRREKSTEQYHYW 3722224
Score = 74.4 bits (156), Expect(2) = 4e-028
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3 / -2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY TKPL+KSWHV+GLGYNPSIS E IR+AAV
Sbjct: 3721788 LPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRNAAV 3721669
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 85.8 bits (181), Expect(2) = 4e-028
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
RY KYLNF+ PI+ + +P+ C WA+G+N+FDL WR+ T L+H + E N D LW
Sbjct: 3627132 RYHKYLNFSHPIISSKIDPHTCGWAFGMNIFDLIAWRKANATALYHYWQEQNADLLLW 3626959
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -3 / -1
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
T L AGL++FYG +PLD+ WHV+GLGY+ I I SAAV
Sbjct: 3626955 TGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAV 3626827
>ref|NT_079921.2| Oryza sativa (japonica cultivar-group)
Length = 1595909
Score = 85.8 bits (181), Expect(2) = 4e-028
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = -3 / -3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
RY KYLNF+ PI+ + +P+ C WA+G+N+FDL WR+ T L+H + E N D LW
Sbjct: 402129 RYHKYLNFSHPIISSKIDPHTCGWAFGMNIFDLIAWRKANATALYHYWQEQNADLLLW 401956
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -3 / -3
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
T L AGL++FYG +PLD+ WHV+GLGY+ I I SAAV
Sbjct: 401952 TGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAV 401824
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0039N21, complete sequence
Length = 151732
Score = 85.8 bits (181), Expect(2) = 4e-028
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
RY KYLNF+ PI+ + +P+ C WA+G+N+FDL WR+ T L+H + E N D LW
Sbjct: 65392 RYHKYLNFSHPIISSKIDPHTCGWAFGMNIFDLIAWRKANATALYHYWQEQNADLLLW 65219
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -3 / -1
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
T L AGL++FYG +PLD+ WHV+GLGY+ I I SAAV
Sbjct: 65215 TGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAV 65087
>gb|AACV01006898.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006898, whole
genome shotgun sequence
Length = 46047
Score = 85.8 bits (181), Expect(2) = 4e-028
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
RY KYLNF+ PI+ + +P+ C WA+G+N+FDL WR+ T L+H + E N D LW
Sbjct: 7353 RYHKYLNFSHPIISSKIDPHTCGWAFGMNIFDLIAWRKANATALYHYWQEQNADLLLW 7526
Score = 61.1 bits (127), Expect(2) = 4e-028
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -3 / +3
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
T L AGL++FYG +PLD+ WHV+GLGY+ I I SAAV
Sbjct: 7530 TGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAV 7658
>dbj|AK100641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110G15, full
insert sequence
Length = 2535
Score = 90.0 bits (190), Expect(2) = 5e-028
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ KYLNF+ P++ F+P AC WAYG+NVFDL WRR T+++H + +NE+ LW
Sbjct: 1850 RFDKYLNFSNPLIASNFDPRACGWAYGMNVFDLSEWRRQKITDVYHNWQRLNENRILW 2023
Score = 57.0 bits (118), Expect(2) = 5e-028
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3 / +2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L AGL++F+ T PL SWH +GLGYNP+I+ + IR A+V
Sbjct: 2036 LPAGLVTFWNRTFPLHHSWHQLGLGYNPNINEKDIRRASV 2155
>ref|XM_468666.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2282
Score = 85.8 bits (181), Expect(2) = 5e-028
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
RY KYLNF+ PI+ + +P+ C WA+G+N+FDL WR+ T L+H + E N D LW
Sbjct: 1340 RYHKYLNFSHPIISSKIDPHTCGWAFGMNIFDLIAWRKANATALYHYWQEQNADLLLW 1513
Score = 61.1 bits (127), Expect(2) = 5e-028
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -3 / +2
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
T L AGL++FYG +PLD+ WHV+GLGY+ I I SAAV
Sbjct: 1517 TGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAV 1645
>dbj|AK100228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048J06, full
insert sequence
Length = 2280
Score = 85.8 bits (181), Expect(2) = 5e-028
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
RY KYLNF+ PI+ + +P+ C WA+G+N+FDL WR+ T L+H + E N D LW
Sbjct: 1338 RYHKYLNFSHPIISSKIDPHTCGWAFGMNIFDLIAWRKANATALYHYWQEQNADLLLW 1511
Score = 61.1 bits (127), Expect(2) = 5e-028
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -3 / +3
Query: 131 TSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
T L AGL++FYG +PLD+ WHV+GLGY+ I I SAAV
Sbjct: 1515 TGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAV 1643
>ref|NM_196050.1| Oryza sativa (japonica cultivar-group) hypothetical protein
(OSJNBa0073L01.13), mRNA
Length = 1836
Score = 84.5 bits (178), Expect(2) = 7e-026
Identities = 25/58 (43%), Positives = 42/58 (72%)
Frame = -3 / +1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ YLNF+ P + + F+P AC WA+G+N+FDL+ W++ T ++H + ++NED +LW
Sbjct: 1405 RFDTYLNFSHPKIAENFDPRACGWAFGMNMFDLKEWKKQNITGIYHYWQDLNEDRKLW 1578
Score = 55.1 bits (114), Expect(2) = 7e-026
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PL+++WHV+GLGY+P++ I +AAV
Sbjct: 1591 LPPGLITFYNLTYPLNRNWHVLGLGYDPAVDLAEIENAAV 1710
>dbj|AK061910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A03, full
insert sequence
Length = 1574
Score = 84.5 bits (178), Expect(2) = 7e-026
Identities = 25/58 (43%), Positives = 42/58 (72%)
Frame = -3 / +1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ YLNF+ P + + F+P AC WA+G+N+FDL+ W++ T ++H + ++NED +LW
Sbjct: 835 RFDTYLNFSHPKIAENFDPRACGWAFGMNMFDLKEWKKQNITGIYHYWQDLNEDRKLW 1008
Score = 55.1 bits (114), Expect(2) = 7e-026
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PL+++WHV+GLGY+P++ I +AAV
Sbjct: 1021 LPPGLITFYNLTYPLNRNWHVLGLGYDPAVDLAEIENAAV 1140
>gb|CV731236.1|CV731236 FLO--05-C22.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-C22,
mRNA sequence
Length = 500
Score = 72.1 bits (151), Expect(2) = 2e-025
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = -3 / +1
Query: 263 FNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
F+PNAC WAYG+N+FDL+ W++ T ++H++ MNED LW
Sbjct: 34 FDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSMNEDRVLW 159
Score = 64.3 bits (134), Expect(2) = 2e-025
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 172 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 291
>dbj|AK066204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056D06, full
insert sequence
Length = 2974
Score = 81.3 bits (171), Expect(2) = 6e-025
Identities = 24/58 (41%), Positives = 41/58 (70%)
Frame = -3 / +1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ YLNF+ P + + F+P AC WA+G+N+F L+ W++ T ++H + ++NED +LW
Sbjct: 2305 RFDTYLNFSHPKIAENFDPRACGWAFGMNMFGLKEWKKQNITGIYHYWQDLNEDRKLW 2478
Score = 55.1 bits (114), Expect(2) = 6e-025
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PL+++WHV+GLGY+P++ I +AAV
Sbjct: 2491 LPPGLITFYNLTYPLNRNWHVLGLGYDPAVDLAEIENAAV 2610
>gb|AQ872381.1|AQ872381 nbeb0048C10r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0048C10r, DNA sequence
Length = 781
Score = 116 bits (248), Expect = 8e-025
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -3 / +3
Query: 158 NEDGELWDPTSILTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
NEDG LWDPTS+L AGLM+FYGNTKPLDKSWHVMGLGYNPSISPE I AAV
Sbjct: 360 NEDGVLWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIAGAAV 515
>gb|AACV01020445.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020445, whole
genome shotgun sequence
Length = 25627
Score = 77.1 bits (162), Expect(2) = 8e-025
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL+ W++ T ++H++ M
Sbjct: 17309 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSM 17461
Score = 76.7 bits (161), Expect(2) = 5e-024
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL W++ T ++H++ M
Sbjct: 22934 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLNEWKKKDITGIYHRWQNM 23086
Score = 64.3 bits (134), Expect(2) = 8e-025
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 17598 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 17717
Score = 62.0 bits (129), Expect(2) = 5e-024
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 23223 LPHGLLTFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 23342
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1254_E07
Length = 124028
Score = 77.1 bits (162), Expect(2) = 4e-024
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL+ W++ T ++H++ M
Sbjct: 79823 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSM 79671
Score = 76.7 bits (161), Expect(2) = 2e-023
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL W++ T ++H++ M
Sbjct: 74198 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLNEWKKKDITGIYHRWQNM 74046
Score = 64.3 bits (134), Expect(2) = 4e-024
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 79534 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 79415
Score = 62.0 bits (129), Expect(2) = 2e-023
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 73909 LPHGLLTFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 73790
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0515E01
Length = 140063
Score = 77.1 bits (162), Expect(2) = 4e-024
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = -3 / -3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL+ W++ T ++H++ M
Sbjct: 27834 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSM 27682
Score = 76.7 bits (161), Expect(2) = 3e-023
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -3 / -3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL W++ T ++H++ M
Sbjct: 22209 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLNEWKKKDITGIYHRWQNM 22057
Score = 64.3 bits (134), Expect(2) = 4e-024
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 27545 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 27426
Score = 62.0 bits (129), Expect(2) = 3e-023
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 21920 LPHGLLTFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 21801
>gb|AACV01018116.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018116, whole
genome shotgun sequence
Length = 36630
Score = 79.0 bits (166), Expect(2) = 1e-023
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ +YLNF+ P++ F+P+AC WA+G+NVFDL WRR TE++H + ++
Sbjct: 3708 RFDRYLNFSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKL 3860
Score = 58.8 bits (122), Expect(2) = 1e-023
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PL++SWHV+GLGYNP +S I AAV
Sbjct: 4749 LPPGLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAV 4868
>gb|AACV01020262.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020262, whole
genome shotgun sequence
Length = 47804
Score = 80.8 bits (170), Expect(2) = 2e-023
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -3 / -2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGEL 141
R+ KYLNF+ P++ F+P AC WAYG+NVFDL WRR T+++H + + EL
Sbjct: 6298 RFDKYLNFSNPLIASNFDPRACGWAYGMNVFDLSEWRRQKITDVYHNWQRLVSTYEL 6128
Score = 57.0 bits (118), Expect(2) = 2e-023
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L AGL++F+ T PL SWH +GLGYNP+I+ + IR A+V
Sbjct: 5648 LPAGLVTFWNRTFPLHHSWHQLGLGYNPNINEKDIRRASV 5529
>dbj|AP003867.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1111_B02,
*** SEQUENCING IN PROGRESS ***
Length = 96360
Score = 79.0 bits (166), Expect(2) = 4e-023
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ +YLNF+ P++ F+P+AC WA+G+NVFDL WRR TE++H + ++
Sbjct: 48354 RFDRYLNFSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKL 48506
Score = 58.8 bits (122), Expect(2) = 4e-023
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PL++SWHV+GLGYNP +S I AAV
Sbjct: 49395 LPPGLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAV 49514
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1136_A10
Length = 101249
Score = 79.0 bits (166), Expect(2) = 4e-023
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ +YLNF+ P++ F+P+AC WA+G+NVFDL WRR TE++H + ++
Sbjct: 97244 RFDRYLNFSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKL 97396
Score = 58.8 bits (122), Expect(2) = 4e-023
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -3 / +2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PL++SWHV+GLGYNP +S I AAV
Sbjct: 98285 LPPGLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAV 98404
>ref|NT_107077.1| Oryza sativa (japonica cultivar-group)
Length = 1516644
Score = 77.1 bits (162), Expect(2) = 4e-023
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL+ W++ T ++H++ M
Sbjct: 455676 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSM 455524
Score = 76.7 bits (161), Expect(2) = 3e-022
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -3 / -1
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ KYLNF+ P + F+PNAC WAYG+N+FDL W++ T ++H++ M
Sbjct: 450051 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLNEWKKKDITGIYHRWQNM 449899
Score = 64.3 bits (134), Expect(2) = 4e-023
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++FY T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 455387 LPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 455268
Score = 62.0 bits (129), Expect(2) = 3e-022
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PLDKSWHV+GLGYNPSI I +AAV
Sbjct: 449762 LPHGLLTFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV 449643
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0670E08
Length = 133106
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEM 159
R+ +YLNF+ P++ F+P+AC WA+G+NVFDL WRR TE++H + ++
Sbjct: 38447 RFDRYLNFSNPVIVKNFDPHACGWAFGMNVFDLAEWRRQNITEIYHSWQKL 38599
Score = 58.8 bits (122), Expect(2) = 5e-023
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -3 / +2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L GL++F+ T PL++SWHV+GLGYNP +S I AAV
Sbjct: 39488 LPPGLITFWNKTLPLNRSWHVLGLGYNPHVSSRDIERAAV 39607
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0463D04
Length = 145828
Score = 80.8 bits (170), Expect(2) = 5e-023
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGEL 141
R+ KYLNF+ P++ F+P AC WAYG+NVFDL WRR T+++H + + EL
Sbjct: 51213 RFDKYLNFSNPLIASNFDPRACGWAYGMNVFDLSEWRRQKITDVYHNWQRLVSTYEL 51383
Score = 57.0 bits (118), Expect(2) = 5e-023
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3 / +2
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L AGL++F+ T PL SWH +GLGYNP+I+ + IR A+V
Sbjct: 51863 LPAGLVTFWNRTFPLHHSWHQLGLGYNPNINEKDIRRASV 51982
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0463G11
Length = 154188
Score = 80.8 bits (170), Expect(2) = 6e-023
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -3 / +2
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGEL 141
R+ KYLNF+ P++ F+P AC WAYG+NVFDL WRR T+++H + + EL
Sbjct: 104075 RFDKYLNFSNPLIASNFDPRACGWAYGMNVFDLSEWRRQKITDVYHNWQRLVSTYEL 104245
Score = 57.0 bits (118), Expect(2) = 6e-023
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAV 3
L AGL++F+ T PL SWH +GLGYNP+I+ + IR A+V
Sbjct: 104725 LPAGLVTFWNRTFPLHHSWHQLGLGYNPNINEKDIRRASV 104844
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 82.2 bits (173), Expect(2) = 8e-023
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -3 / +3
Query: 311 RYRKYLNFTQPIVRDRFNPNACAWAYGVNVFDLETWRRDGCTELFHQYMEMNEDGELW 138
R+ KYLN + P++R F+P+AC WA+G+NV DL WR T ++H + E N D LW
Sbjct: 10086312 RFHKYLNHSHPLIRAHFDPDACGWAFGMNVLDLVMWRNKNVTGIYHYWQERNADHTLW 10086485
Score = 46.9 bits (96), Expect(2) = 8e-023
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -3 / +3
Query: 122 LTAGLMSFYGNTKPLDKSWHVMGLGY 45
L GL++FYG +PLD WHV+GLGY
Sbjct: 10086498 LPPGLLAFYGLVEPLDPKWHVLGLGY 10086575
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,695,403,046
Number of Sequences: 438736
Number of extensions: 45528707
Number of successful extensions: 301649
Number of sequences better than 1.0e-020: 82
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 47263012628
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)