TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE36e08.yg.2.1
(352 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC137931.3| Oryza sativa (japonica cultivar-group) chrom... 268 2e-070
gb|AACV01006417.1| Oryza sativa (japonica cultivar-group) c... 268 2e-070
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 268 2e-070
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 268 2e-070
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 268 2e-070
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 268 2e-070
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 268 2e-070
dbj|AK071929.1| Oryza sativa (japonica cultivar-group) cDNA... 187 4e-046
dbj|AK105333.1| Oryza sativa (japonica cultivar-group) cDNA... 187 4e-046
gb|AACV01002605.1| Oryza sativa (japonica cultivar-group) c... 187 4e-046
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 187 4e-046
ref|NM_190416.1| Oryza sativa (japonica cultivar-group), p... 187 4e-046
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 187 4e-046
dbj|AP003734.3| Oryza sativa (japonica cultivar-group) geno... 187 4e-046
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 187 4e-046
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 187 4e-046
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 187 4e-046
dbj|AK109523.1| Oryza sativa (japonica cultivar-group) cDNA... 144 5e-040
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 144 7e-040
emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC O... 144 7e-040
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 144 9e-040
emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC O... 144 9e-040
gb|AACV01022227.1| Oryza sativa (japonica cultivar-group) c... 144 9e-040
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 144 3e-033
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 144 3e-033
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 144 3e-033
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 144 3e-033
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 144 3e-033
gb|D39461.1|D39461 RICS0804A Rice shoot Oryza sativa (japon... 120 7e-026
gb|CH401271.1| Oryza sativa (japonica cultivar-group) chrom... 84 3e-024
gb|AC133008.3| Oryza sativa (japonica cultivar-group) chrom... 84 3e-024
gb|AACV01023824.1| Oryza sativa (japonica cultivar-group) c... 84 3e-024
dbj|AK060544.1| Oryza sativa (japonica cultivar-group) cDNA... 84 3e-024
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 67 7e-024
gb|AACV01023843.1| Oryza sativa (japonica cultivar-group) c... 67 8e-024
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 75 5e-021
gb|CH401192.1| Oryza sativa (japonica cultivar-group) chrom... 75 5e-021
emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC O... 75 5e-021
gb|AACV01011225.1| Oryza sativa (japonica cultivar-group) c... 75 5e-021
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0039F10, complete sequence
Length = 139714
Score = 268 bits (579), Expect = 2e-070
Identities = 105/117 (89%), Positives = 108/117 (92%)
Frame = -1 / +2
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYHHIPGVFTDDFP +PPVFFDFTSQNVP
Sbjct: 73784 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHHIPGVFTDDFPPMPPVFFDFTSQNVP 73963
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
RALWQPVKGT+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 73964 RALWQPVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 74134
Score = 250 bits (541), Expect = 3e-065
Identities = 99/116 (85%), Positives = 99/116 (85%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY VP TGCHSARGTF
Sbjct: 74133 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRYSLVPFTGCHSARGTF 73954
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
EVKSKNTGG GKSSVNTPGMWW*CAC RETV GSWNDT MLAP PWQN
Sbjct: 73953 WEVKSKNTGGIGGKSSVNTPGMWW*CACRRETVLGSWNDTLFMLAPNRVLLGPWQN 73786
Score = 137 bits (294), Expect(2) = 2e-039
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = -3 / +1
Query: 206 RVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAG 27
RVLRLHL ERP RAVAA +GH VPRQVRR GADR+PGH HLRRRGA HAHPRLPLLRA
Sbjct: 73930 RVLRLHLPERPPRAVAAGEGHQAVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRAR 74109
Query: 26 HGVRQLRP 3
HGVRQLRP
Sbjct: 74110 HGVRQLRP 74133
Score = 62.5 bits (130), Expect(3) = 7e-025
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = +2 / -1
Query: 80 EDARVLEHDLHHGAVPDAVQAGALDGLPQRARDVL 184
EDA VLE DLHH AVPDAVQ GAL LPQRA DVL
Sbjct: 74056 EDAGVLEDDLHHRAVPDAVQLGALHRLPQRAGDVL 73952
Score = 52.8 bits (109), Expect(3) = 7e-025
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 260 RLQQGDGVGELERHXXHARAXXGXXXALAER 352
RLQ+GDGVGELERH HARA G +LAER
Sbjct: 73876 RLQEGDGVGELERHVVHARAEPGVVGSLAER 73784
Score = 47.8 bits (98), Expect(2) = 2e-039
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / +1
Query: 350 VLPGPXXXXXXREHXXRVVPAPRHRLPAAGA 258
VLPG REH RVVPAP+HRLP AGA
Sbjct: 73786 VLPGTQQHPVRREHEQRVVPAPQHRLPPAGA 73878
Score = 38.6 bits (78), Expect(3) = 7e-025
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 4 GRSCRTPWPARRSGS 48
GRSCRTPW ARRSGS
Sbjct: 74132 GRSCRTPWRARRSGS 74088
>gb|AACV01006417.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006417, whole
genome shotgun sequence
Length = 7888
Score = 268 bits (579), Expect = 2e-070
Identities = 105/117 (89%), Positives = 108/117 (92%)
Frame = -1 / -3
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYHHIPGVFTDDFP +PPVFFDFTSQNVP
Sbjct: 6089 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHHIPGVFTDDFPPMPPVFFDFTSQNVP 5910
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
RALWQPVKGT+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 5909 RALWQPVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 5739
Score = 250 bits (541), Expect = 3e-065
Identities = 99/116 (85%), Positives = 99/116 (85%)
Frame = +3 / +1
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY VP TGCHSARGTF
Sbjct: 5740 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRYSLVPFTGCHSARGTF 5919
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
EVKSKNTGG GKSSVNTPGMWW*CAC RETV GSWNDT MLAP PWQN
Sbjct: 5920 WEVKSKNTGGIGGKSSVNTPGMWW*CACRRETVLGSWNDTLFMLAPNRVLLGPWQN 6087
Score = 137 bits (294), Expect(2) = 2e-039
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = -3 / -2
Query: 206 RVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAG 27
RVLRLHL ERP RAVAA +GH VPRQVRR GADR+PGH HLRRRGA HAHPRLPLLRA
Sbjct: 5943 RVLRLHLPERPPRAVAAGEGHQAVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRAR 5764
Query: 26 HGVRQLRP 3
HGVRQLRP
Sbjct: 5763 HGVRQLRP 5740
Score = 62.5 bits (130), Expect(3) = 7e-025
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = +2 / +3
Query: 80 EDARVLEHDLHHGAVPDAVQAGALDGLPQRARDVL 184
EDA VLE DLHH AVPDAVQ GAL LPQRA DVL
Sbjct: 5817 EDAGVLEDDLHHRAVPDAVQLGALHRLPQRAGDVL 5921
Score = 52.8 bits (109), Expect(3) = 7e-025
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 260 RLQQGDGVGELERHXXHARAXXGXXXALAER 352
RLQ+GDGVGELERH HARA G +LAER
Sbjct: 5997 RLQEGDGVGELERHVVHARAEPGVVGSLAER 6089
Score = 47.8 bits (98), Expect(2) = 2e-039
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -2
Query: 350 VLPGPXXXXXXREHXXRVVPAPRHRLPAAGA 258
VLPG REH RVVPAP+HRLP AGA
Sbjct: 6087 VLPGTQQHPVRREHEQRVVPAPQHRLPPAGA 5995
Score = 38.6 bits (78), Expect(3) = 7e-025
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 4 GRSCRTPWPARRSGS 48
GRSCRTPW ARRSGS
Sbjct: 5741 GRSCRTPWRARRSGS 5785
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 268 bits (579), Expect = 2e-070
Identities = 105/117 (89%), Positives = 108/117 (92%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYHHIPGVFTDDFP +PPVFFDFTSQNVP
Sbjct: 1761148 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHHIPGVFTDDFPPMPPVFFDFTSQNVP 1761327
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
RALWQPVKGT+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 1761328 RALWQPVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 1761498
Score = 250 bits (541), Expect = 3e-065
Identities = 99/116 (85%), Positives = 99/116 (85%)
Frame = +3 / -1
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY VP TGCHSARGTF
Sbjct: 1761497 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRYSLVPFTGCHSARGTF 1761318
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
EVKSKNTGG GKSSVNTPGMWW*CAC RETV GSWNDT MLAP PWQN
Sbjct: 1761317 WEVKSKNTGGIGGKSSVNTPGMWW*CACRRETVLGSWNDTLFMLAPNRVLLGPWQN 1761150
Score = 137 bits (294), Expect(2) = 2e-039
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 206 RVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAG 27
RVLRLHL ERP RAVAA +GH VPRQVRR GADR+PGH HLRRRGA HAHPRLPLLRA
Sbjct: 1761294 RVLRLHLPERPPRAVAAGEGHQAVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRAR 1761473
Query: 26 HGVRQLRP 3
HGVRQLRP
Sbjct: 1761474 HGVRQLRP 1761497
Score = 62.5 bits (130), Expect(3) = 6e-025
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = +2 / -3
Query: 80 EDARVLEHDLHHGAVPDAVQAGALDGLPQRARDVL 184
EDA VLE DLHH AVPDAVQ GAL LPQRA DVL
Sbjct: 1761420 EDAGVLEDDLHHRAVPDAVQLGALHRLPQRAGDVL 1761316
Score = 52.8 bits (109), Expect(3) = 6e-025
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2 / -3
Query: 260 RLQQGDGVGELERHXXHARAXXGXXXALAER 352
RLQ+GDGVGELERH HARA G +LAER
Sbjct: 1761240 RLQEGDGVGELERHVVHARAEPGVVGSLAER 1761148
Score = 47.8 bits (98), Expect(2) = 2e-039
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / +3
Query: 350 VLPGPXXXXXXREHXXRVVPAPRHRLPAAGA 258
VLPG REH RVVPAP+HRLP AGA
Sbjct: 1761150 VLPGTQQHPVRREHEQRVVPAPQHRLPPAGA 1761242
Score = 38.6 bits (78), Expect(3) = 6e-025
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 4 GRSCRTPWPARRSGS 48
GRSCRTPW ARRSGS
Sbjct: 1761496 GRSCRTPWRARRSGS 1761452
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 268 bits (579), Expect = 2e-070
Identities = 105/117 (89%), Positives = 108/117 (92%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYHHIPGVFTDDFP +PPVFFDFTSQNVP
Sbjct: 10499434 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHHIPGVFTDDFPPMPPVFFDFTSQNVP 10499613
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
RALWQPVKGT+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 10499614 RALWQPVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 10499784
Score = 250 bits (541), Expect = 3e-065
Identities = 99/116 (85%), Positives = 99/116 (85%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY VP TGCHSARGTF
Sbjct: 10499783 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRYSLVPFTGCHSARGTF 10499604
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
EVKSKNTGG GKSSVNTPGMWW*CAC RETV GSWNDT MLAP PWQN
Sbjct: 10499603 WEVKSKNTGGIGGKSSVNTPGMWW*CACRRETVLGSWNDTLFMLAPNRVLLGPWQN 10499436
Score = 137 bits (294), Expect(2) = 2e-039
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 206 RVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAG 27
RVLRLHL ERP RAVAA +GH VPRQVRR GADR+PGH HLRRRGA HAHPRLPLLRA
Sbjct: 10499580 RVLRLHLPERPPRAVAAGEGHQAVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRAR 10499759
Query: 26 HGVRQLRP 3
HGVRQLRP
Sbjct: 10499760 HGVRQLRP 10499783
Score = 62.5 bits (130), Expect(3) = 6e-025
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = +2 / -1
Query: 80 EDARVLEHDLHHGAVPDAVQAGALDGLPQRARDVL 184
EDA VLE DLHH AVPDAVQ GAL LPQRA DVL
Sbjct: 10499706 EDAGVLEDDLHHRAVPDAVQLGALHRLPQRAGDVL 10499602
Score = 52.8 bits (109), Expect(3) = 6e-025
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 260 RLQQGDGVGELERHXXHARAXXGXXXALAER 352
RLQ+GDGVGELERH HARA G +LAER
Sbjct: 10499526 RLQEGDGVGELERHVVHARAEPGVVGSLAER 10499434
Score = 47.8 bits (98), Expect(2) = 2e-039
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / +3
Query: 350 VLPGPXXXXXXREHXXRVVPAPRHRLPAAGA 258
VLPG REH RVVPAP+HRLP AGA
Sbjct: 10499436 VLPGTQQHPVRREHEQRVVPAPQHRLPPAGA 10499528
Score = 38.6 bits (78), Expect(3) = 6e-025
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 4 GRSCRTPWPARRSGS 48
GRSCRTPW ARRSGS
Sbjct: 10499782 GRSCRTPWRARRSGS 10499738
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 268 bits (579), Expect = 2e-070
Identities = 105/117 (89%), Positives = 108/117 (92%)
Frame = -1 / +3
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYHHIPGVFTDDFP +PPVFFDFTSQNVP
Sbjct: 10691796 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHHIPGVFTDDFPPMPPVFFDFTSQNVP 10691975
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
RALWQPVKGT+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 10691976 RALWQPVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 10692146
Score = 250 bits (541), Expect = 3e-065
Identities = 99/116 (85%), Positives = 99/116 (85%)
Frame = +3 / -1
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY VP TGCHSARGTF
Sbjct: 10692145 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRYSLVPFTGCHSARGTF 10691966
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
EVKSKNTGG GKSSVNTPGMWW*CAC RETV GSWNDT MLAP PWQN
Sbjct: 10691965 WEVKSKNTGGIGGKSSVNTPGMWW*CACRRETVLGSWNDTLFMLAPNRVLLGPWQN 10691798
Score = 137 bits (294), Expect = 4e-031
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = -3 / +2
Query: 206 RVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAG 27
RVLRLHL ERP RAVAA +GH VPRQVRR GADR+PGH HLRRRGA HAHPRLPLLRA
Sbjct: 10691942 RVLRLHLPERPPRAVAAGEGHQAVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRAR 10692121
Query: 26 HGVRQLRP 3
HGVRQLRP
Sbjct: 10692122 HGVRQLRP 10692145
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 268 bits (579), Expect = 2e-070
Identities = 105/117 (89%), Positives = 108/117 (92%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYHHIPGVFTDDFP +PPVFFDFTSQNVP
Sbjct: 10415332 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHHIPGVFTDDFPPMPPVFFDFTSQNVP 10415511
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
RALWQPVKGT+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 10415512 RALWQPVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 10415682
Score = 250 bits (541), Expect = 3e-065
Identities = 99/116 (85%), Positives = 99/116 (85%)
Frame = +3 / -3
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY VP TGCHSARGTF
Sbjct: 10415681 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRYSLVPFTGCHSARGTF 10415502
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
EVKSKNTGG GKSSVNTPGMWW*CAC RETV GSWNDT MLAP PWQN
Sbjct: 10415501 WEVKSKNTGGIGGKSSVNTPGMWW*CACRRETVLGSWNDTLFMLAPNRVLLGPWQN 10415334
Score = 137 bits (294), Expect = 4e-031
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 206 RVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAG 27
RVLRLHL ERP RAVAA +GH VPRQVRR GADR+PGH HLRRRGA HAHPRLPLLRA
Sbjct: 10415478 RVLRLHLPERPPRAVAAGEGHQAVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRAR 10415657
Query: 26 HGVRQLRP 3
HGVRQLRP
Sbjct: 10415658 HGVRQLRP 10415681
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 268 bits (579), Expect = 2e-070
Identities = 105/117 (89%), Positives = 108/117 (92%)
Frame = -1 / +1
Query: 352 PFCQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVP 173
PFCQG GASM VSFQLP+TVSLLQAHYHHIPGVFTDDFP +PPVFFDFTSQNVP
Sbjct: 10417231 PFCQGPNNTRFGASMNNVSFQLPNTVSLLQAHYHHIPGVFTDDFPPMPPVFFDFTSQNVP 10417410
Query: 172 RALWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
RALWQPVKGT+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 10417411 RALWQPVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 10417581
Score = 250 bits (541), Expect = 3e-065
Identities = 99/116 (85%), Positives = 99/116 (85%)
Frame = +3 / -1
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY VP TGCHSARGTF
Sbjct: 10417580 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRYSLVPFTGCHSARGTF 10417401
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLAPXXXXXXPWQN 350
EVKSKNTGG GKSSVNTPGMWW*CAC RETV GSWNDT MLAP PWQN
Sbjct: 10417400 WEVKSKNTGGIGGKSSVNTPGMWW*CACRRETVLGSWNDTLFMLAPNRVLLGPWQN 10417233
Score = 137 bits (294), Expect = 4e-031
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 206 RVLRLHLAERPARAVAARQGHPPVPRQVRRRGADRVPGHGHLRRRGAPHAHPRLPLLRAG 27
RVLRLHL ERP RAVAA +GH VPRQVRR GADR+PGH HLRRRGA HAHPRLPLLRA
Sbjct: 10417377 RVLRLHLPERPPRAVAAGEGHQAVPRQVRRGGADRLPGHRHLRRRGASHAHPRLPLLRAR 10417556
Query: 26 HGVRQLRP 3
HGVRQLRP
Sbjct: 10417557 HGVRQLRP 10417580
>dbj|AK071929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072C02, full
insert sequence
Length = 2023
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 1235 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 1414
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 1415 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 1579
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 1578 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 1399
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 1398 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 1264
>dbj|AK105333.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D07, full
insert sequence
Length = 1678
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 890 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 1069
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 1070 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 1234
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 1233 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 1054
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 1053 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 919
>gb|AACV01002605.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002605, whole
genome shotgun sequence
Length = 51705
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 7201 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 7022
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 7021 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 6857
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / +3
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 6858 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 7037
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 7038 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 7172
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 35478439 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 35478618
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 35478619 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 35478783
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 35478782 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 35478603
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 35478602 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 35478468
>ref|NM_190416.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1704
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 1123 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 1302
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 1303 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 1467
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 1466 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 1287
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 1286 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 1152
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 9925822 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 9926001
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 9926002 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 9926166
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 9926165 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 9925986
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 9925985 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 9925851
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1088C09
Length = 154084
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 21718 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 21897
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 21898 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 22062
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -3
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 22061 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 21882
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 21881 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 21747
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 9682552 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 9682731
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 9682732 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 9682896
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -3
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 9682895 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 9682716
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 9682715 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 9682581
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 34884273 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 34884452
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 34884453 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 34884617
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -3
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 34884616 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 34884437
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 34884436 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 34884302
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 187 bits (403), Expect = 4e-046
Identities = 72/115 (62%), Positives = 86/115 (74%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPGVFTDDFPALPPVFFDFTSQNVPRA 167
C G ASM +SF P T SLL AHY+ IPGVFT DFPA PPV FD+T+QNVPR
Sbjct: 35397769 CGGPNNTRFTASMNNISFVFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRY 35397948
Query: 166 LWQPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
LWQPV T+LY++++G+VVQIV QDT I + E HP+HIHGY FY+LA GFGN+DP
Sbjct: 35397949 LWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDP 35398113
Score = 116 bits (248), Expect = 9e-025
Identities = 60/105 (57%), Positives = 62/105 (59%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTF 182
GS LP P A *K *PWM MG S M VS TICTT P L+ Y V TGCH RGTF
Sbjct: 35398112 GSKLPKPSARM*KS*PWMWMGWFSGETMLVSCRTICTTEPNLSLYSFVAGTGCHR*RGTF 35397933
Query: 183 CEVKSKNTGGSAGKSSVNTPGMWW*CACSRETVSGSWNDTXXMLA 317
C V S TGG AGKS VNTPGM *CA E V G + MLA
Sbjct: 35397932 CAV*SNCTGGYAGKSVVNTPGMP**CAWRSEVVCGKTKEMLFMLA 35397798
>dbj|AK109523.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F06, full
insert sequence
Length = 1973
Score = 144 bits (310), Expect(2) = 5e-040
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +2
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 1337 HHGAPGGVFTADFPASPPVQFDYTAQNVSRALWQPVPGTKVYKLKYGSAVQVVLQGTNIF 1516
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 1517 AGENHPIHLHGYDFYILAEGLGNFD 1591
Score = 111 bits (238), Expect(2) = 1e-025
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -3
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 1584 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPGTGCHSARLTFCAV 1405
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 1404 *SNCTGGLAGKSAVNTP 1354
Score = 42.3 bits (86), Expect(2) = 5e-040
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPG 239
C G AS+ VSF LP + S+LQAH+H PG
Sbjct: 1247 CGGPNGTRFAASINSVSFVLPSSTSILQAHHHGAPG 1354
Score = 27.2 bits (53), Expect(2) = 1e-025
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3 / -3
Query: 240 PGMWW*CACSRETVSGSWNDTXXMLA 317
PG W CA E GS +T MLA
Sbjct: 1353 PGAPWWCAWRMEVEEGSTKETLLMLA 1276
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 144 bits (310), Expect(2) = 7e-040
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +2
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 436979 HHGAPGGVFTADFPASPPVQFDYTAQNVSRALWQPVPGTKVYKLKYGSAVQVVLQGTNIF 437158
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 437159 AGENHPIHLHGYDFYILAEGLGNFD 437233
Score = 111 bits (238), Expect(2) = 1e-025
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -2
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 437226 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPGTGCHSARLTFCAV 437047
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 437046 *SNCTGGLAGKSAVNTP 436996
Score = 41.8 bits (85), Expect(2) = 7e-040
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPG 239
C G AS+ VSF LP + S+LQAH+H PG
Sbjct: 436889 CGGPNGTRFAASINNVSFVLPSSTSILQAHHHGAPG 436996
Score = 27.2 bits (53), Expect(2) = 1e-025
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3 / -2
Query: 240 PGMWW*CACSRETVSGSWNDTXXMLA 317
PG W CA E GS +T MLA
Sbjct: 436995 PGAPWWCAWRMEVEEGSTKETLLMLA 436918
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 141089
Score = 144 bits (310), Expect(2) = 7e-040
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / -1
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 109793 HHGAPGGVFTADFPASPPVQFDYTAQNVSRALWQPVPGTKVYKLKYGSAVQVVLQGTNIF 109614
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 109613 AGENHPIHLHGYDFYILAEGLGNFD 109539
Score = 111 bits (238), Expect(2) = 1e-025
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / +1
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 109546 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPGTGCHSARLTFCAV 109725
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 109726 *SNCTGGLAGKSAVNTP 109776
Score = 41.8 bits (85), Expect(2) = 7e-040
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / -1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPG 239
C G AS+ VSF LP + S+LQAH+H PG
Sbjct: 109883 CGGPNGTRFAASINNVSFVLPSSTSILQAHHHGAPG 109776
Score = 27.2 bits (53), Expect(2) = 1e-025
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3 / +1
Query: 240 PGMWW*CACSRETVSGSWNDTXXMLA 317
PG W CA E GS +T MLA
Sbjct: 109777 PGAPWWCAWRMEVEEGSTKETLLMLA 109854
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094
genomic scaffold, whole genome shotgun sequence
Length = 4775249
Score = 144 bits (309), Expect(2) = 9e-040
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +1
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 78229 HHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQPVAGTKVYKLKYGSAVQVVLQGTNIF 78408
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 78409 AGENHPIHLHGYDFYILAEGLGNFD 78483
Score = 113 bits (241), Expect(2) = 4e-026
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -1
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 78476 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPATGCHSARLTFCAV 78297
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 78296 *SNCTGGLAGKSAVNTP 78246
Score = 41.8 bits (85), Expect(2) = 9e-040
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPG 239
C G AS+ VSF LP + S+LQAH+H PG
Sbjct: 78139 CGGPNGTRFAASINNVSFVLPSSTSILQAHHHGAPG 78246
Score = 27.2 bits (53), Expect(2) = 4e-026
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3 / -1
Query: 240 PGMWW*CACSRETVSGSWNDTXXMLA 317
PG W CA E GS +T MLA
Sbjct: 78245 PGAPWWCAWRMEVEEGSTKETLLMLA 78168
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
chromosome 11 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 164143
Score = 144 bits (309), Expect(2) = 9e-040
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +2
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 102587 HHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQPVAGTKVYKLKYGSAVQVVLQGTNIF 102766
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 102767 AGENHPIHLHGYDFYILAEGLGNFD 102841
Score = 113 bits (241), Expect(2) = 4e-026
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -2
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 102834 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPATGCHSARLTFCAV 102655
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 102654 *SNCTGGLAGKSAVNTP 102604
Score = 41.8 bits (85), Expect(2) = 9e-040
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPG 239
C G AS+ VSF LP + S+LQAH+H PG
Sbjct: 102497 CGGPNGTRFAASINNVSFVLPSSTSILQAHHHGAPG 102604
Score = 27.2 bits (53), Expect(2) = 4e-026
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3 / -2
Query: 240 PGMWW*CACSRETVSGSWNDTXXMLA 317
PG W CA E GS +T MLA
Sbjct: 102603 PGAPWWCAWRMEVEEGSTKETLLMLA 102526
>gb|AACV01022227.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022227, whole
genome shotgun sequence
Length = 20909
Score = 144 bits (309), Expect(2) = 9e-040
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / -2
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 9823 HHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQPVAGTKVYKLKYGSAVQVVLQGTNIF 9644
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 9643 AGENHPIHLHGYDFYILAEGLGNFD 9569
Score = 113 bits (241), Expect(2) = 4e-026
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / +3
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 9576 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPATGCHSARLTFCAV 9755
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 9756 *SNCTGGLAGKSAVNTP 9806
Score = 41.8 bits (85), Expect(2) = 9e-040
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIPG 239
C G AS+ VSF LP + S+LQAH+H PG
Sbjct: 9913 CGGPNGTRFAASINNVSFVLPSSTSILQAHHHGAPG 9806
Score = 27.2 bits (53), Expect(2) = 4e-026
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3 / +3
Query: 240 PGMWW*CACSRETVSGSWNDTXXMLA 317
PG W CA E GS +T MLA
Sbjct: 9807 PGAPWWCAWRMEVEEGSTKETLLMLA 9884
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
complete sequence
Length = 27566993
Score = 144 bits (310), Expect = 3e-033
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +2
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 436979 HHGAPGGVFTADFPASPPVQFDYTAQNVSRALWQPVPGTKVYKLKYGSAVQVVLQGTNIF 437158
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 437159 AGENHPIHLHGYDFYILAEGLGNFD 437233
Score = 111 bits (238), Expect = 2e-023
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -3
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 437226 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPGTGCHSARLTFCAV 437047
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 437046 *SNCTGGLAGKSAVNTP 436996
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 144 bits (310), Expect = 3e-033
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +2
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 436979 HHGAPGGVFTADFPASPPVQFDYTAQNVSRALWQPVPGTKVYKLKYGSAVQVVLQGTNIF 437158
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 437159 AGENHPIHLHGYDFYILAEGLGNFD 437233
Score = 111 bits (238), Expect = 2e-023
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -3
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 437226 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPGTGCHSARLTFCAV 437047
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 437046 *SNCTGGLAGKSAVNTP 436996
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome
shotgun sequence
Length = 22593549
Score = 144 bits (309), Expect = 3e-033
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +1
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 380521 HHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQPVAGTKVYKLKYGSAVQVVLQGTNIF 380700
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 380701 AGENHPIHLHGYDFYILAEGLGNFD 380775
Score = 113 bits (241), Expect = 8e-024
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -2
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 380768 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPATGCHSARLTFCAV 380589
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 380588 *SNCTGGLAGKSAVNTP 380538
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
complete sequence
Length = 28386948
Score = 144 bits (309), Expect = 3e-033
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +1
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 395269 HHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQPVAGTKVYKLKYGSAVQVVLQGTNIF 395448
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 395449 AGENHPIHLHGYDFYILAEGLGNFD 395523
Score = 113 bits (241), Expect = 8e-024
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -2
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 395516 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPATGCHSARLTFCAV 395337
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 395336 *SNCTGGLAGKSAVNTP 395286
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 144 bits (309), Expect = 3e-033
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -1 / +1
Query: 259 HYHHIPGVFTDDFPALPPVFFDFTSQNVPRALWQPVKGTRLYRVRYGAVVQIVFQDTGIF 80
H+ GVFT DFPA PPV FD+T+QNV RALWQPV GT++Y+++YG+ VQ+V Q T IF
Sbjct: 395269 HHGAPGGVFTADFPANPPVQFDYTAQNVSRALWQPVAGTKVYKLKYGSAVQVVLQGTNIF 395448
Query: 79 AAEEHPMHIHGYHFYVLATGFGNYD 5
A E HP+H+HGY FY+LA G GN+D
Sbjct: 395449 AGENHPIHLHGYDFYILAEGLGNFD 395523
Score = 113 bits (241), Expect = 8e-024
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = +3 / -1
Query: 12 LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRYRRVPLTGCHSARGTFCEV 191
LPNP A *K *PW MG S AKM V W+T CT PYL+ Y VP TGCHSAR TFC V
Sbjct: 395516 LPNPSARM*KS*PWRWMGWFSPAKMLVPWSTTCTAEPYLSLYTLVPATGCHSARLTFCAV 395337
Query: 192 KSKNTGGSAGKSSVNTP 242
S TGG AGKS+VNTP
Sbjct: 395336 *SNCTGGLAGKSAVNTP 395286
>gb|D39461.1|D39461 RICS0804A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 251
Score = 120 bits (256), Expect = 7e-026
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = -1 / +3
Query: 142 RLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
+LYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP
Sbjct: 3 KLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 143
Score = 113 bits (241), Expect = 8e-024
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3 / -2
Query: 3 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWNTICTTAPYLTRY 137
GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSW TICTTAPYLTRY
Sbjct: 142 GS*LPNPVAST*KW*PWMCMGCSSAAKMPVSWKTICTTAPYLTRY 8
>gb|CH401271.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000108
genomic scaffold, whole genome shotgun sequence
Length = 327658
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -1 / +1
Query: 160 QPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
Q + GTR+YR+ Y A VQ+V QDTGI + E HP+H+HG++F+V+ G GNY+P
Sbjct: 317629 QTMNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFFVVGKGVGNYNP 317787
Score = 49.6 bits (102), Expect(2) = 3e-024
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -1 / +1
Query: 271 LLQAHYHHIPGVFTDDFPALPPVFFDFT 188
+LQAHY++IPGVFT+DFPA P F++T
Sbjct: 317524 ILQAHYYNIPGVFTEDFPATPLHKFNYT 317607
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0026K20 map S10559, complete sequence
Length = 115996
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -1 / +2
Query: 160 QPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
Q + GTR+YR+ Y A VQ+V QDTGI + E HP+H+HG++F+V+ G GNY+P
Sbjct: 71447 QTMNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFFVVGKGVGNYNP 71605
Score = 49.6 bits (102), Expect(2) = 3e-024
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -1 / +2
Query: 271 LLQAHYHHIPGVFTDDFPALPPVFFDFT 188
+LQAHY++IPGVFT+DFPA P F++T
Sbjct: 71342 ILQAHYYNIPGVFTEDFPATPLHKFNYT 71425
>gb|AACV01023824.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023824, whole
genome shotgun sequence
Length = 27649
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -1 / +1
Query: 160 QPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
Q + GTR+YR+ Y A VQ+V QDTGI + E HP+H+HG++F+V+ G GNY+P
Sbjct: 17620 QTMNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFFVVGKGVGNYNP 17778
Score = 49.6 bits (102), Expect(2) = 3e-024
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -1 / +1
Query: 271 LLQAHYHHIPGVFTDDFPALPPVFFDFT 188
+LQAHY++IPGVFT+DFPA P F++T
Sbjct: 17515 ILQAHYYNIPGVFTEDFPATPLHKFNYT 17598
>dbj|AK060544.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F03, full
insert sequence
Length = 1335
Score = 84.5 bits (178), Expect(2) = 3e-024
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -1 / +3
Query: 160 QPVKGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDP 2
Q + GTR+YR+ Y A VQ+V QDTGI + E HP+H+HG++F+V+ G GNY+P
Sbjct: 558 QTMNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFFVVGKGVGNYNP 716
Score = 49.6 bits (102), Expect(2) = 3e-024
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -1 / +3
Query: 271 LLQAHYHHIPGVFTDDFPALPPVFFDFT 188
+LQAHY++IPGVFT+DFPA P F++T
Sbjct: 453 ILQAHYYNIPGVFTEDFPATPLHKFNYT 536
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109
genomic scaffold, whole genome shotgun sequence
Length = 5753019
Score = 67.0 bits (140), Expect(3) = 7e-024
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -1 / +2
Query: 112 VQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
VQ+V Q T IFA E HP+H+HGY FY+LA G GN+D
Sbjct: 433001 VQVVLQGTNIFAGENHPIHLHGYDFYILAEGLGNFD 433108
Score = 49.6 bits (102), Expect(3) = 7e-024
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -1 / +2
Query: 226 DFPALPPVFFDFTSQNVPRALWQPVKG 146
+F A PPV FD+T+QNV RALWQPV G
Sbjct: 432884 NFRASPPVQFDYTAQNVSRALWQPVPG 432964
Score = 33.6 bits (67), Expect(3) = 7e-024
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHY 254
C G AS+ VSF LP + S+LQAH+
Sbjct: 432759 CGGPNGTRFAASINNVSFVLPSSTSILQAHH 432851
>gb|AACV01023843.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023843, whole
genome shotgun sequence
Length = 31145
Score = 67.0 bits (140), Expect(3) = 8e-024
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -1 / -2
Query: 112 VQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
VQ+V Q T IFA E HP+H+HGY FY+LA G GN+D
Sbjct: 20590 VQVVLQGTNIFAGENHPIHLHGYDFYILAEGLGNFD 20483
Score = 49.6 bits (102), Expect(3) = 8e-024
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -1 / -2
Query: 226 DFPALPPVFFDFTSQNVPRALWQPVKG 146
+F A PPV FD+T+QNV RALWQPV G
Sbjct: 20707 NFRASPPVQFDYTAQNVSRALWQPVPG 20627
Score = 33.6 bits (67), Expect(3) = 8e-024
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHY 254
C G AS+ VSF LP + S+LQAH+
Sbjct: 20832 CGGPNGTRFAASINNVSFVLPSSTSILQAHH 20740
>ref|NT_079833.2| Oryza sativa (japonica cultivar-group)
Length = 3813697
Score = 75.3 bits (158), Expect(3) = 5e-021
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = -1 / +2
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
K T++ +RY V++V Q+T + A E HPMHIHG++F++LA GFGNYD
Sbjct: 1227962 KSTKVKTLRYNETVEMVLQNTRLIAKESHPMHIHGFNFFILAQGFGNYD 1228108
Score = 36.3 bits (73), Expect(3) = 5e-021
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1 / +2
Query: 241 GVFTDDFPALPPVFFDFTSQNVPRALWQ 158
GV+T DFP PPV FD+T A Q
Sbjct: 1227869 GVYTRDFPDTPPVVFDYTGDESDNATMQ 1227952
Score = 29.0 bits (57), Expect(3) = 5e-021
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1 / +2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIP 242
C +SM SF +P SLL+AH+ P
Sbjct: 1227761 CNRSAPPVFSSSMNNASFVVPKNTSLLEAHFRREP 1227865
>gb|CH401192.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000029
genomic scaffold, whole genome shotgun sequence
Length = 624827
Score = 75.3 bits (158), Expect(3) = 5e-021
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = -1 / +1
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
K T++ +RY V++V Q+T + A E HPMHIHG++F++LA GFGNYD
Sbjct: 163015 KSTKVKTLRYNETVEMVLQNTRLIAKESHPMHIHGFNFFILAQGFGNYD 163161
Score = 36.3 bits (73), Expect(3) = 5e-021
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1 / +1
Query: 241 GVFTDDFPALPPVFFDFTSQNVPRALWQ 158
GV+T DFP PPV FD+T A Q
Sbjct: 162922 GVYTRDFPDTPPVVFDYTGDESDNATMQ 163005
Score = 29.0 bits (57), Expect(3) = 5e-021
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1 / +1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIP 242
C +SM SF +P SLL+AH+ P
Sbjct: 162814 CNRSAPPVFSSSMNNASFVVPKNTSLLEAHFRREP 162918
>emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471_C07 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 103007
Score = 75.3 bits (158), Expect(3) = 5e-021
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = -1 / -2
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
K T++ +RY V++V Q+T + A E HPMHIHG++F++LA GFGNYD
Sbjct: 43075 KSTKVKTLRYNETVEMVLQNTRLIAKESHPMHIHGFNFFILAQGFGNYD 42929
Score = 36.3 bits (73), Expect(3) = 5e-021
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1 / -2
Query: 241 GVFTDDFPALPPVFFDFTSQNVPRALWQ 158
GV+T DFP PPV FD+T A Q
Sbjct: 43168 GVYTRDFPDTPPVVFDYTGDESDNATMQ 43085
Score = 29.0 bits (57), Expect(3) = 5e-021
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1 / -2
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIP 242
C +SM SF +P SLL+AH+ P
Sbjct: 43276 CNRSAPPVFSSSMNNASFVVPKNTSLLEAHFRREP 43172
>gb|AACV01011225.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011225, whole
genome shotgun sequence
Length = 37498
Score = 75.3 bits (158), Expect(3) = 5e-021
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = -1 / -1
Query: 151 KGTRLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYD 5
K T++ +RY V++V Q+T + A E HPMHIHG++F++LA GFGNYD
Sbjct: 28105 KSTKVKTLRYNETVEMVLQNTRLIAKESHPMHIHGFNFFILAQGFGNYD 27959
Score = 36.3 bits (73), Expect(3) = 5e-021
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1 / -1
Query: 241 GVFTDDFPALPPVFFDFTSQNVPRALWQ 158
GV+T DFP PPV FD+T A Q
Sbjct: 28198 GVYTRDFPDTPPVVFDYTGDESDNATMQ 28115
Score = 29.0 bits (57), Expect(3) = 5e-021
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1 / -1
Query: 346 CQGXXXXXXGASMXXVSFQLPDTVSLLQAHYHHIP 242
C +SM SF +P SLL+AH+ P
Sbjct: 28306 CNRSAPPVFSSSMNNASFVVPKNTSLLEAHFRREP 28202
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,693,065,923
Number of Sequences: 438736
Number of extensions: 26763411
Number of successful extensions: 535706
Number of sequences better than 1.0e-020: 58
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 54534245340
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)