TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 9196052.2.1
(771 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK071601.1| Oryza sativa (japonica cultivar-group) cDNA... 154 6e-041
gb|CV733228.1|CV733228 FLO--08-A18.g1 Rice flower lambda ph... 154 6e-041
gb|CV729296.1|CV729296 FLO--02-B04.g1 Rice flower lambda ph... 154 1e-039
ref|XM_467790.1| Oryza sativa (japonica cultivar-group), mRNA 152 5e-035
gb|AACV01013344.1| Oryza sativa (japonica cultivar-group) c... 118 6e-028
dbj|AP003513.2| Oryza sativa (japonica cultivar-group) geno... 118 3e-027
dbj|AP003569.3| Oryza sativa (japonica cultivar-group) geno... 118 3e-027
gb|AACV01005419.1| Oryza sativa (japonica cultivar-group) c... 115 4e-026
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 118 9e-026
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 118 1e-025
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 118 5e-025
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 118 5e-025
ref|NM_196405.1| Oryza sativa (japonica cultivar-group) hyp... 100 4e-024
dbj|AP005848.3| Oryza sativa (japonica cultivar-group) geno... 115 7e-024
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 115 8e-024
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 115 8e-024
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 115 8e-024
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 115 8e-024
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 96 1e-023
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 96 1e-023
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 96 1e-023
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 96 1e-023
ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chr... 96 1e-023
gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbar... 96 1e-023
gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbar... 96 1e-023
gb|AACV01021504.1| Oryza sativa (japonica cultivar-group) c... 96 1e-023
gb|CB683392.1|CB683392 OSJNEf11L08.f OSJNEf Oryza sativa (j... 111 1e-022
gb|AACV01005957.1| Oryza sativa (japonica cultivar-group) c... 102 2e-021
gb|AC144491.1| Oryza sativa (japonica cultivar-group) chrom... 102 4e-021
gb|AC126221.2| Oryza sativa (japonica cultivar-group) chrom... 102 6e-021
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 102 6e-020
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 102 6e-020
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 102 6e-020
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 102 6e-020
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 102 6e-020
dbj|AK069569.1| Oryza sativa (japonica cultivar-group) cDNA... 100 3e-019
dbj|AG206902.1| Oryza sativa (japonica cultivar-group) DNA,... 77 3e-012
gb|AACV01005954.1| Oryza sativa (japonica cultivar-group) c... 77 3e-012
gb|AACV01019959.1| Oryza sativa (japonica cultivar-group) c... 77 3e-012
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 77 3e-012
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 77 3e-012
gb|AACV01010560.1| Oryza sativa (japonica cultivar-group) c... 73 4e-011
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 73 4e-011
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 73 4e-011
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 73 4e-011
emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromoso... 73 4e-011
emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromoso... 73 4e-011
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 73 4e-011
ref|XM_474070.1| Oryza sativa (japonica cultivar-group), p... 72 7e-011
gb|AQ273895.1|AQ273895 nbxb0031L04r CUGI Rice BAC Library O... 65 8e-009
gb|AU030987.1|AU030987 AU030987 Rice cDNA from immature lea... 51 6e-008
gb|C73165.1|C73165 C73165 Rice panicle at flowering stage O... 38 7e-005
dbj|AK111303.1| Oryza sativa (japonica cultivar-group) cDNA... 49 8e-004
gb|AC109594.2| Oryza sativa (japonica cultivar-group) chrom... 49 8e-004
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 49 8e-004
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 49 8e-004
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 49 8e-004
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.024
gb|AACV01023501.1| Oryza sativa (japonica cultivar-group) c... 44 0.025
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.025
gb|AY872998.1|AY872998 04ET3_373_A_371_000_013G06 Oryza sat... 42 0.090
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 37 0.60
emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromoso... 34 0.85
gb|AACV01025842.1| Oryza sativa (japonica cultivar-group) C... 33 0.96
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 29 2.9
gb|AACV01010345.1| Oryza sativa (japonica cultivar-group) c... 37 3.0
emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromoso... 37 3.0
tpg|BK004879.1| TPA: Oryza sativa (japonica cultivar-group)... 34 3.5
dbj|AP004843.2| Oryza sativa (japonica cultivar-group) geno... 29 3.5
dbj|AP004871.3| Oryza sativa (japonica cultivar-group) geno... 29 3.6
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 36 4.1
dbj|AP003761.3| Oryza sativa (japonica cultivar-group) geno... 36 4.1
gb|AACV01014891.1| Oryza sativa (japonica cultivar-group) c... 36 4.1
dbj|AP003621.3| Oryza sativa (japonica cultivar-group) geno... 36 4.1
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 36 4.1
gb|AACV01003397.1| Oryza sativa (japonica cultivar-group) c... 29 4.3
dbj|AP002913.1| Oryza sativa (japonica cultivar-group) geno... 29 4.8
dbj|AP005644.3| Oryza sativa (japonica cultivar-group) geno... 36 5.6
gb|AACV01025806.1| Oryza sativa (japonica cultivar-group) C... 36 5.6
ref|XM_466420.1| Oryza sativa (japonica cultivar-group), mRNA 36 5.6
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 36 5.6
gb|CH401328.1| Oryza sativa (japonica cultivar-group) scaff... 36 5.6
gb|AACV01000157.1| Oryza sativa (japonica cultivar-group) c... 29 5.7
ref|XM_550075.1| Oryza sativa (japonica cultivar-group), mRNA 29 6.8
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 29 6.9
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 27 8.1
gb|AC148611.1| Oryza sativa (japonica cultivar-group) chrom... 29 8.6
gb|AC093489.2| Oryza sativa (japonica cultivar-group) chrom... 29 8.9
ref|NT_107238.1| Oryza sativa (japonica cultivar-group) 28 9.1
gb|AACV01011058.1| Oryza sativa (japonica cultivar-group) c... 29 9.3
gb|AACV01028033.1| Oryza sativa (japonica cultivar-group) C... 30 9.5
>dbj|AK071601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102C01, full
insert sequence
Length = 799
Score = 154 bits (331), Expect(2) = 6e-041
Identities = 67/73 (91%), Positives = 71/73 (97%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
INELIS+LQ+LLPS+RRRG +QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHN
Sbjct: 152 INELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHN 331
Query: 534 SPGAEIIRSLLR* 496
SPGAEIIRSLLR*
Sbjct: 332 SPGAEIIRSLLR* 370
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 217 GVDDEAAEGDVQLHQEPAPGGGRPQ 291
Score = 52.8 bits (109), Expect(2) = 2e-009
Identities = 25/48 (52%), Positives = 26/48 (54%)
Frame = +2 / -2
Query: 620 VSLSSFVVDAWLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
VS SSFVVDAWL PRRR LG T + DLRLDIV
Sbjct: 246 VSFSSFVVDAWLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 103
Score = 37.7 bits (76), Expect(2) = 6e-041
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +1
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 103 DDVEPEVVALLRVGGGDQRAHLQ 171
Score = 33.1 bits (66), Expect(2) = 2e-009
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 307 VGEPVAEVVHLPVQALDV 254
>gb|CV733228.1|CV733228 FLO--08-A18.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-A18,
mRNA sequence
Length = 527
Score = 154 bits (331), Expect(2) = 6e-041
Identities = 67/73 (91%), Positives = 71/73 (97%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
INELIS+LQ+LLPS+RRRG +QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHN
Sbjct: 198 INELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHN 377
Query: 534 SPGAEIIRSLLR* 496
SPGAEIIRSLLR*
Sbjct: 378 SPGAEIIRSLLR* 416
Score = 55.6 bits (115), Expect = 7e-006
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDD+AA+GD+QLHQEPAPGGGR +
Sbjct: 263 GVDDKAAEGDVQLHQEPAPGGGRPQ 337
Score = 52.8 bits (109), Expect(2) = 2e-009
Identities = 25/48 (52%), Positives = 26/48 (54%)
Frame = +2 / -2
Query: 620 VSLSSFVVDAWLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
VS SSFVVDAWL PRRR LG T + DLRLDIV
Sbjct: 292 VSFSSFVVDAWLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 149
Score = 37.7 bits (76), Expect(2) = 6e-041
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +2
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 149 DDVEPEVVALLRVGGGDQRAHLQ 217
Score = 33.1 bits (66), Expect(2) = 2e-009
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 353 VGEPVAEVVHLPVQALDV 300
>gb|CV729296.1|CV729296 FLO--02-B04.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-B04,
mRNA sequence
Length = 516
Score = 154 bits (331), Expect(2) = 1e-039
Identities = 67/73 (91%), Positives = 71/73 (97%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
INELIS+LQ+LLPS+RRRG +QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHN
Sbjct: 170 INELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHN 349
Query: 534 SPGAEIIRSLLR* 496
SPGAEIIRSLLR*
Sbjct: 350 SPGAEIIRSLLR* 388
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 235 GVDDEAAEGDVQLHQEPAPGGGRPQ 309
Score = 52.8 bits (109), Expect(2) = 2e-009
Identities = 25/48 (52%), Positives = 26/48 (54%)
Frame = +2 / -1
Query: 620 VSLSSFVVDAWLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
VS SSFVVDAWL PRRR LG T + DLRLDIV
Sbjct: 264 VSFSSFVVDAWLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 121
Score = 33.1 bits (66), Expect(2) = 2e-009
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 325 VGEPVAEVVHLPVQALDV 272
Score = 33.1 bits (66), Expect(2) = 1e-039
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -3 / +1
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GG DQRA+L+
Sbjct: 121 DDVEPEVVALLRVGG*DQRAHLQ 189
>ref|XM_467790.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 267
Score = 152 bits (326), Expect = 5e-035
Identities = 64/72 (88%), Positives = 71/72 (98%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
INELIS+LQ+LLP++RRRG SQASTTKLLKETC+YIKSLHREVDDLSDRLSDLMA+MDHN
Sbjct: 46 INELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHN 225
Query: 534 SPGAEIIRSLLR 499
SPGAEIIRS+LR
Sbjct: 226 SPGAEIIRSILR 261
Score = 68.0 bits (142), Expect(2) = 1e-009
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -3 / +3
Query: 757 VEPEVPRVDGLGGGDQRAYLEXXXXXXXXXXXXXXPGVDDEAAQGDLQLHQEPAPGGG 584
VE +V LGGG+QRA+L+ PGVDDEAA+GD+QLHQEP+PGGG
Sbjct: 3 VEQKVVAWLHLGGGNQRAHLQAPVAAPQLTPTRLQPGVDDEAAEGDVQLHQEPSPGGG 176
Score = 41.8 bits (85), Expect(3) = 2e-007
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / -2
Query: 620 VSLSSFVVDAWLPPRRRALG 679
VS SSFVVDAWL PRRR LG
Sbjct: 140 VSFSSFVVDAWLEPRRRELG 81
Score = 32.2 bits (64), Expect(3) = 2e-007
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
V Q VA+++HLPV+ALDV
Sbjct: 201 VGQPVAEVIHLPVKALDV 148
Score = 20.3 bits (38), Expect(3) = 2e-007
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -2
Query: 515 MISAPGLL 538
MISAPGLL
Sbjct: 245 MISAPGLL 222
Score = 18.5 bits (34), Expect(2) = 1e-009
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -2 / +2
Query: 593 GRWTI*ATAC 564
GRW AT C
Sbjct: 167 GRWMTSATGC 196
>gb|AACV01013344.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013344, whole
genome shotgun sequence
Length = 27471
Score = 118 bits (252), Expect(2) = 6e-028
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -1 / -1
Query: 669 RRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
R + QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHNSPGAEIIRSLLR*
Sbjct: 23319 RMQNKMQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR* 23146
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 23299 GVDDEAAEGDVQLHQEPAPGGGRPQ 23225
Score = 45.1 bits (92), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLH 595
INELIS+LQ+LLPS+RRRG +Q +L T S+ H
Sbjct: 23618 INELISKLQSLLPSSRRRGANQVLHFTVLITTSSHNHHAH 23499
Score = 37.7 bits (76), Expect(2) = 6e-028
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / -1
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 23667 DDVEPEVVALLRVGGGDQRAHLQ 23599
Score = 34.5 bits (69), Expect(2) = 0.052
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2 / +1
Query: 650 WLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
WL PRRR LG T + DLRLDIV
Sbjct: 23554 WLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 23667
Score = 33.1 bits (66), Expect(2) = 0.052
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 23209 VGEPVAEVVHLPVQALDV 23262
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0690H04
Length = 137319
Score = 118 bits (252), Expect(2) = 3e-027
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -1 / +3
Query: 669 RRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
R + QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHNSPGAEIIRSLLR*
Sbjct: 84339 RMQNKMQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR* 84512
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 84359 GVDDEAAEGDVQLHQEPAPGGGRPQ 84433
Score = 45.1 bits (92), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLH 595
INELIS+LQ+LLPS+RRRG +Q +L T S+ H
Sbjct: 84040 INELISKLQSLLPSSRRRGANQVLHFTVLITTSSHNHHAH 84159
Score = 37.7 bits (76), Expect(2) = 3e-027
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 83991 DDVEPEVVALLRVGGGDQRAHLQ 84059
Score = 34.5 bits (69), Expect(2) = 0.22
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2 / -2
Query: 650 WLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
WL PRRR LG T + DLRLDIV
Sbjct: 84104 WLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 83991
Score = 33.1 bits (66), Expect(2) = 0.22
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 84449 VGEPVAEVVHLPVQALDV 84396
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0425F05
Length = 162858
Score = 118 bits (252), Expect(2) = 3e-027
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -1 / +1
Query: 669 RRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
R + QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHNSPGAEIIRSLLR*
Sbjct: 2089 RMQNKMQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR* 2262
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 2109 GVDDEAAEGDVQLHQEPAPGGGRPQ 2183
Score = 45.1 bits (92), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLH 595
INELIS+LQ+LLPS+RRRG +Q +L T S+ H
Sbjct: 1790 INELISKLQSLLPSSRRRGANQVLHFTVLITTSSHNHHAH 1909
Score = 37.7 bits (76), Expect(2) = 3e-027
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +1
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 1741 DDVEPEVVALLRVGGGDQRAHLQ 1809
Score = 34.5 bits (69), Expect(2) = 0.25
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2 / -1
Query: 650 WLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
WL PRRR LG T + DLRLDIV
Sbjct: 1854 WLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 1741
Score = 33.1 bits (66), Expect(2) = 0.25
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 2199 VGEPVAEVVHLPVQALDV 2146
>gb|AACV01005419.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005419, whole
genome shotgun sequence
Length = 6043
Score = 115 bits (245), Expect(3) = 4e-026
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETC+YIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRS+LR
Sbjct: 1443 QASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 1291
Score = 53.3 bits (110), Expect = 3e-005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 649 GVDDEAAQGDLQLHQEPAPGGG 584
GVDDEAA+GD+QLHQEP+PGGG
Sbjct: 1441 GVDDEAAEGDVQLHQEPSPGGG 1376
Score = 44.6 bits (91), Expect = 0.013
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETC 616
INELIS+LQ+LLP++RRRG SQ + L C
Sbjct: 1732 INELISKLQSLLPNSRRRGSSQVANHILAYANC 1634
Score = 29.5 bits (58), Expect(3) = 4e-026
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVE +V LGGG+QRA+L+
Sbjct: 1781 DDVEQKVVAWLHLGGGNQRAHLQ 1713
Score = 24.9 bits (48), Expect(3) = 4e-026
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -1
Query: 91 CGLDRVVSSLTDNRPTAS 38
CGLDRVVSS + T +
Sbjct: 865 CGLDRVVSSTDNRPTTTT 812
>ref|NT_079873.2| Oryza sativa (japonica cultivar-group)
Length = 5116111
Score = 118 bits (252), Expect(2) = 9e-026
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -1 / +3
Query: 669 RRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
R + QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHNSPGAEIIRSLLR*
Sbjct: 2259543 RMQNKMQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR* 2259716
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 2259563 GVDDEAAEGDVQLHQEPAPGGGRPQ 2259637
Score = 45.1 bits (92), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLH 595
INELIS+LQ+LLPS+RRRG +Q +L T S+ H
Sbjct: 2259244 INELISKLQSLLPSSRRRGANQVLHFTVLITTSSHNHHAH 2259363
Score = 37.7 bits (76), Expect(2) = 9e-026
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 2259195 DDVEPEVVALLRVGGGDQRAHLQ 2259263
Score = 34.5 bits (69), Expect(3) = 0.33
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2 / -3
Query: 650 WLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
WL PRRR LG T + DLRLDIV
Sbjct: 2259308 WLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 2259195
Score = 33.1 bits (66), Expect(3) = 0.33
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 2259653 VGEPVAEVVHLPVQALDV 2259600
Score = 33.1 bits (66), Expect(3) = 0.33
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1 / -3
Query: 382 IWRWREAGRRPWMERDSARADAA 450
+W+W + G R W E ARA AA
Sbjct: 4548167 LWQWEDVGSRRWQEGGRARAAAA 4548099
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 118 bits (252), Expect(2) = 1e-025
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -1 / +3
Query: 669 RRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
R + QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHNSPGAEIIRSLLR*
Sbjct: 6496185 RMQNKMQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR* 6496358
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 6496205 GVDDEAAEGDVQLHQEPAPGGGRPQ 6496279
Score = 45.1 bits (92), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLH 595
INELIS+LQ+LLPS+RRRG +Q +L T S+ H
Sbjct: 6495886 INELISKLQSLLPSSRRRGANQVLHFTVLITTSSHNHHAH 6496005
Score = 37.7 bits (76), Expect(2) = 1e-025
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 6495837 DDVEPEVVALLRVGGGDQRAHLQ 6495905
Score = 34.5 bits (69), Expect(2) = 6.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2 / -2
Query: 650 WLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
WL PRRR LG T + DLRLDIV
Sbjct: 6495950 WLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 6495837
Score = 33.1 bits (66), Expect(2) = 6.3
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
V + VA++VHLPVQALDV
Sbjct: 6496295 VGEPVAEVVHLPVQALDV 6496242
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 118 bits (252), Expect(2) = 5e-025
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -1 / +3
Query: 669 RRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
R + QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHNSPGAEIIRSLLR*
Sbjct: 6496185 RMQNKMQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR* 6496358
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 6496205 GVDDEAAEGDVQLHQEPAPGGGRPQ 6496279
Score = 45.1 bits (92), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLH 595
INELIS+LQ+LLPS+RRRG +Q +L T S+ H
Sbjct: 6495886 INELISKLQSLLPSSRRRGANQVLHFTVLITTSSHNHHAH 6496005
Score = 37.7 bits (76), Expect(2) = 5e-025
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 6495837 DDVEPEVVALLRVGGGDQRAHLQ 6495905
Score = 36.3 bits (73), Expect(2) = 2.3
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 393 ARGRPSSMDGERQRARRCCIYAARVAGR 476
A P+SMD R+RARR ++A R+AG+
Sbjct: 28496874 AEAAPASMDAGRRRARRGAVFAQRLAGK 28496791
Score = 34.5 bits (69), Expect(2) = 2.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2 / -3
Query: 650 WLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
WL PRRR LG T + DLRLDIV
Sbjct: 6495950 WLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 6495837
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 118 bits (252), Expect(2) = 5e-025
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -1 / +3
Query: 669 RRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
R + QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA MDHNSPGAEIIRSLLR*
Sbjct: 6567963 RMQNKMQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR* 6568136
Score = 57.4 bits (119), Expect = 2e-006
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
GVDDEAA+GD+QLHQEPAPGGGR +
Sbjct: 6567983 GVDDEAAEGDVQLHQEPAPGGGRPQ 6568057
Score = 45.1 bits (92), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLH 595
INELIS+LQ+LLPS+RRRG +Q +L T S+ H
Sbjct: 6567664 INELISKLQSLLPSSRRRGANQVLHFTVLITTSSHNHHAH 6567783
Score = 37.7 bits (76), Expect(2) = 5e-025
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 6567615 DDVEPEVVALLRVGGGDQRAHLQ 6567683
Score = 36.3 bits (73), Expect(2) = 2.3
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 393 ARGRPSSMDGERQRARRCCIYAARVAGR 476
A P+SMD R+RARR ++A R+AG+
Sbjct: 29334527 AEAAPASMDAGRRRARRGAVFAQRLAGK 29334444
Score = 34.5 bits (69), Expect(2) = 2.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2 / -2
Query: 650 WLPPRRRALGXXXXXXXXXXXXXXXXTVDARDLRLDIV 763
WL PRRR LG T + DLRLDIV
Sbjct: 6567728 WLAPRRRELGRRDWSLEMSSLISSSDTEERDDLRLDIV 6567615
>ref|NM_196405.1| Oryza sativa (japonica cultivar-group) hypothetical protein similar
to putative DNA binding proteins (OSJNBa0044A10.22),
mRNA
Length = 267
Score = 100 bits (213), Expect(2) = 4e-024
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = -1 / +1
Query: 675 SARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
S RR S++ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 88 SRRRGATSRSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 267
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 123 DEAAEGDVQLHQEPAPGSGRPE 188
Score = 34.5 bits (69), Expect(2) = 4e-024
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGS 652
INELIS+LQ+LLP + RR G+
Sbjct: 43 INELISKLQSLLPESSRRRGA 105
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0078N11
Length = 155168
Score = 115 bits (245), Expect(2) = 7e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETC+YIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRS+LR
Sbjct: 78535 QASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 78383
Score = 53.3 bits (110), Expect = 3e-005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 649 GVDDEAAQGDLQLHQEPAPGGG 584
GVDDEAA+GD+QLHQEP+PGGG
Sbjct: 78533 GVDDEAAEGDVQLHQEPSPGGG 78468
Score = 44.6 bits (91), Expect = 0.013
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETC 616
INELIS+LQ+LLP++RRRG SQ + L C
Sbjct: 78824 INELISKLQSLLPNSRRRGSSQVANHILAYANC 78726
Score = 29.5 bits (58), Expect(2) = 7e-024
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVE +V LGGG+QRA+L+
Sbjct: 78873 DDVEQKVVAWLHLGGGNQRAHLQ 78805
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 115 bits (245), Expect = 8e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETC+YIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRS+LR
Sbjct: 6608137 QASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 6607985
Score = 53.3 bits (110), Expect(2) = 2e-005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 649 GVDDEAAQGDLQLHQEPAPGGG 584
GVDDEAA+GD+QLHQEP+PGGG
Sbjct: 6608135 GVDDEAAEGDVQLHQEPSPGGG 6608070
Score = 44.6 bits (91), Expect(2) = 4e-006
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETC 616
INELIS+LQ+LLP++RRRG SQ + L C
Sbjct: 6608426 INELISKLQSLLPNSRRRGSSQVANHILAYANC 6608328
Score = 34.1 bits (68), Expect(2) = 2e-005
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 496 AQVRPSGRPATRAAYMQHLRARCLSPSMDDGRPLAIA 386
A VRPS P++RAA + RC+ PS P +A
Sbjct: 2915242 AAVRPSAAPSSRAAAIHRRLRRCMQPSAVQRPPTRLA 2915132
Score = 29.5 bits (58), Expect(2) = 4e-006
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / -3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVE +V LGGG+QRA+L+
Sbjct: 6608475 DDVEQKVVAWLHLGGGNQRAHLQ 6608407
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 115 bits (245), Expect = 8e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETC+YIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRS+LR
Sbjct: 18004286 QASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 18004134
Score = 53.3 bits (110), Expect = 3e-005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -3 / -2
Query: 649 GVDDEAAQGDLQLHQEPAPGGG 584
GVDDEAA+GD+QLHQEP+PGGG
Sbjct: 18004284 GVDDEAAEGDVQLHQEPSPGGG 18004219
Score = 44.6 bits (91), Expect = 0.013
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETC 616
INELIS+LQ+LLP++RRRG SQ + L C
Sbjct: 18004575 INELISKLQSLLPNSRRRGSSQVANHILAYANC 18004477
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 115 bits (245), Expect = 8e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETC+YIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRS+LR
Sbjct: 31457350 QASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 31457198
Score = 53.3 bits (110), Expect = 3e-005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -3 / -2
Query: 649 GVDDEAAQGDLQLHQEPAPGGG 584
GVDDEAA+GD+QLHQEP+PGGG
Sbjct: 31457348 GVDDEAAEGDVQLHQEPSPGGG 31457283
Score = 44.6 bits (91), Expect = 0.013
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETC 616
INELIS+LQ+LLP++RRRG SQ + L C
Sbjct: 31457639 INELISKLQSLLPNSRRRGSSQVANHILAYANC 31457541
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 115 bits (245), Expect = 8e-024
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR 499
QASTTKLLKETC+YIKSLHREVDDLSDRLSDLMA+MDHNSPGAEIIRS+LR
Sbjct: 31443138 QASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 31442986
Score = 53.3 bits (110), Expect = 3e-005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 649 GVDDEAAQGDLQLHQEPAPGGG 584
GVDDEAA+GD+QLHQEP+PGGG
Sbjct: 31443136 GVDDEAAEGDVQLHQEPSPGGG 31443071
Score = 44.6 bits (91), Expect = 0.013
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETC 616
INELIS+LQ+LLP++RRRG SQ + L C
Sbjct: 31443427 INELISKLQSLLPNSRRRGSSQVANHILAYANC 31443329
Score = 35.9 bits (72), Expect = 5.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1 / -3
Query: 367 RQCAEIWRWREAGRRPWMERDSARADAAYMRRAWPAGR 480
R CA +WR R G P +A A + RAWP R
Sbjct: 22586168 RSCAWLWRRRSRGSTPRRTTTTAGAPRRWQSRAWPRKR 22586055
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 13214542 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 13214387
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRP 478
Q + ++L+ETCSYI+SLHREVDDLS+RL++L+A+ D ++ A +IR LL *P S P
Sbjct: 13266074 QVPSARVLQETCSYIRSLHREVDDLSERLAELLAAADVSTAQAAVIRGLLM*PPSPPP 13266247
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -1
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 13214531 DEAAEGDVQLHQEPAPGSGRPE 13214466
Score = 42.3 bits (86), Expect = 0.069
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G E A GD+QLH EPAPGGGR +
Sbjct: 13266076 GAVGEGAAGDVQLHPEPAPGGGRPQ 13266150
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 13214725 INELISKLQSLLPESSRRRGATSRVSLLL 13214639
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 13207202 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 13207047
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRP 478
Q + ++L+ETCSYI+SLHREVDDLS+RL++L+A+ D ++ A +IR LL *P S P
Sbjct: 13258734 QVPSARVLQETCSYIRSLHREVDDLSERLAELLAAADVSTAQAAVIRGLLM*PPSPPP 13258907
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -3
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 13207191 DEAAEGDVQLHQEPAPGSGRPE 13207126
Score = 42.3 bits (86), Expect = 0.069
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G E A GD+QLH EPAPGGGR +
Sbjct: 13258736 GAVGEGAAGDVQLHPEPAPGGGRPQ 13258810
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 13207385 INELISKLQSLLPESSRRRGATSRVSLLL 13207299
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 12267130 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 12266975
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -1
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 12267119 DEAAEGDVQLHQEPAPGSGRPE 12267054
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 12267313 INELISKLQSLLPESSRRRGATSRVSLLL 12267227
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 1401336 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 1401181
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -1
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 1401325 DEAAEGDVQLHQEPAPGSGRPE 1401260
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 1401519 INELISKLQSLLPESSRRRGATSRVSLLL 1401433
>ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1531814
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 1525265 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 1525110
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -3
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 1525254 DEAAEGDVQLHQEPAPGSGRPE 1525189
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 1525448 INELISKLQSLLPESSRRRGATSRVSLLL 1525362
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAa0044A10, from chromosome 10, complete sequence
Length = 173374
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 53451 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 53296
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRP 478
Q + ++L+ETCSYI+SLHREVDDLS+RL++L+A+ D ++ A +IR LL *P S P
Sbjct: 104983 QVPSARVLQETCSYIRSLHREVDDLSERLAELLAAADVSTAQAAVIRGLLM*PPSPPP 105156
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -1
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 53440 DEAAEGDVQLHQEPAPGSGRPE 53375
Score = 42.3 bits (86), Expect = 0.069
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / +3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G E A GD+QLH EPAPGGGR +
Sbjct: 104985 GAVGEGAAGDVQLHPEPAPGGGRPQ 105059
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 53634 INELISKLQSLLPESSRRRGATSRVSLLL 53548
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0044A10, from chromosome 10, complete sequence
Length = 169270
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 162721 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 162566
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / -3
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 162710 DEAAEGDVQLHQEPAPGSGRPE 162645
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 162904 INELISKLQSLLPESSRRRGATSRVSLLL 162818
Score = 34.5 bits (69), Expect(2) = 6.5
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ +AQ+VH PVQALDV
Sbjct: 162629 LRQPLAQVVHFPVQALDV 162682
Score = 28.1 bits (55), Expect(2) = 6.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1 / +1
Query: 376 AEIWRWREAGRRPWMERDSARADAAYMRRAWPAG 477
A WRW + P + +A AD+ + AW G
Sbjct: 100090 AAAWRWGRSTTAPVADCSAAMADSIAVASAWRPG 100191
>gb|AACV01021504.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021504, whole
genome shotgun sequence
Length = 21962
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+ TKLLKE CSYIKSLHREVDDLS+RLS+LMA+MD NSP A+IIRSLLR*
Sbjct: 7975 QSPATKLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 8130
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 640 DEAAQGDLQLHQEPAPGGGRSE 575
DEAA+GD+QLHQEPAPG GR E
Sbjct: 7986 DEAAEGDVQLHQEPAPGSGRPE 8051
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ+LLP + RR G+ + + LL
Sbjct: 7792 INELISKLQSLLPESSRRRGATSRVSLLL 7878
>gb|CB683392.1|CB683392 OSJNEf11L08.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11L08 5', mRNA sequence
Length = 632
Score = 111 bits (237), Expect = 1e-022
Identities = 48/60 (80%), Positives = 56/60 (93%)
Frame = -1 / +1
Query: 675 SARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
S+R RG S++S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 298 SSRSRGASRSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 477
Score = 48.3 bits (99), Expect(2) = 2e-008
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +3
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 336 EAAQGDVQLHQEPAPGGGR 392
Score = 35.9 bits (72), Expect(2) = 0.26
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 414 LRQPVGQVVHLPVQALDV 361
Score = 34.1 bits (68), Expect(2) = 2e-008
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLL 628
INELIS+LQ LLP + R G+ S+ L
Sbjct: 256 INELISKLQALLPESSRSRGASRSSASKL 342
Score = 22.1 bits (42), Expect(2) = 0.26
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2 / -1
Query: 620 VSLSSFVVDAWLPPRRR 670
VSLSSF D L PR R
Sbjct: 353 VSLSSFDADDRLAPRLR 303
>gb|AACV01005957.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005957, whole
genome shotgun sequence
Length = 59938
Score = 102 bits (217), Expect(2) = 2e-021
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 14831 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 14986
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 14845 EAAQGDVQLHQEPAPGGGR 14901
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 14923 LRQPVGQVVHLPVQALDV 14870
Score = 32.7 bits (65), Expect(2) = 2e-021
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLK 625
INELIS+LQ LLP + R G+ T K
Sbjct: 14476 INELISKLQALLPESSRSRGASRVRTFFFK 14565
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11,
complete sequence
Length = 132151
Score = 102 bits (217), Expect(2) = 4e-021
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 106422 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 106577
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 75058 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 74900
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +2
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 106436 EAAQGDVQLHQEPAPGGGR 106492
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 106514 LRQPVGQVVHLPVQALDV 106461
Score = 33.6 bits (67), Expect(2) = 4.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3 / -3
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E + GDLQLHQE A GG R E
Sbjct: 75044 EGSAGDLQLHQELASGGRRPE 74982
Score = 32.7 bits (65), Expect(2) = 4e-021
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLK 625
INELIS+LQ LLP + R G+ T K
Sbjct: 106067 INELISKLQALLPESSRSRGASRVRTFFFK 106156
Score = 29.5 bits (58), Expect(2) = 4.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1 / -1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCS 613
I++L+S+LQ LLP AR R + + CS
Sbjct: 75505 ISDLVSKLQDLLPEARLRSNDRVCNSMH*MVNCS 75404
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0015N19, complete sequence
Length = 168430
Score = 102 bits (217), Expect(2) = 6e-021
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 34271 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 34426
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 2907 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 2749
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 34285 EAAQGDVQLHQEPAPGGGR 34341
Score = 35.9 bits (72), Expect(2) = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 34363 LRQPVGQVVHLPVQALDV 34310
Score = 33.6 bits (67), Expect(2) = 5.0
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3 / -1
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E + GDLQLHQE A GG R E
Sbjct: 2893 EGSAGDLQLHQELASGGRRPE 2831
Score = 32.7 bits (65), Expect(2) = 6e-021
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLK 625
INELIS+LQ LLP + R G+ T K
Sbjct: 33916 INELISKLQALLPESSRSRGASRVRTFFFK 34005
Score = 29.5 bits (58), Expect(2) = 5.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCS 613
I++L+S+LQ LLP AR R + + CS
Sbjct: 3354 ISDLVSKLQDLLPEARLRSNDRVCNSMH*MVNCS 3253
Score = 29.5 bits (58), Expect(2) = 1.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 410 VHGWRETARAQMLHI 454
+HGW ET R+Q +HI
Sbjct: 143478 LHGWAETQRSQTMHI 143434
>ref|NT_079917.2| Oryza sativa (japonica cultivar-group)
Length = 2507935
Score = 102 bits (217), Expect = 6e-020
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 2236366 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 2236521
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 2205002 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 2204844
Score = 48.3 bits (99), Expect(2) = 5e-004
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +3
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 2236380 EAAQGDVQLHQEPAPGGGR 2236436
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 2236458 LRQPVGQVVHLPVQALDV 2236405
Score = 32.7 bits (65), Expect(2) = 5e-004
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1 / +3
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLK 625
INELIS+LQ LLP + R G+ T K
Sbjct: 2236011 INELISKLQALLPESSRSRGASRVRTFFFK 2236100
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 102 bits (217), Expect = 6e-020
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 3773126 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 3773281
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 3740214 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 3740056
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 3773140 EAAQGDVQLHQEPAPGGGR 3773196
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 3773218 LRQPVGQVVHLPVQALDV 3773165
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 102 bits (217), Expect = 6e-020
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 3965488 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 3965643
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 3932576 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 3932418
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +3
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 3965502 EAAQGDVQLHQEPAPGGGR 3965558
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 3965580 LRQPVGQVVHLPVQALDV 3965527
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 102 bits (217), Expect = 6e-020
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 3827909 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 3828064
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 3796545 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 3796387
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 3827923 EAAQGDVQLHQEPAPGGGR 3827979
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 3828001 LRQPVGQVVHLPVQALDV 3827948
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 102 bits (217), Expect = 6e-020
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR* 496
Q+S +KLLKETCSYIKSLHREVDDLSDRLS+LM++MD+NSP AEIIRSLLR*
Sbjct: 3827798 QSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 3827953
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 3796434 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 3796276
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 3827812 EAAQGDVQLHQEPAPGGGR 3827868
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 559 VRQAVAQIVHLPVQALDV 612
+RQ V Q+VHLPVQALDV
Sbjct: 3827890 LRQPVGQVVHLPVQALDV 3827837
>dbj|AK069569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022K12, full
insert sequence
Length = 1422
Score = 100 bits (212), Expect = 3e-019
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = -1 / +1
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHN 535
I++L+S+LQ LLP AR R + ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +
Sbjct: 979 ISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMS 1158
Query: 534 SPGAEIIRSLLR*P 493
S A IIRSLL *P
Sbjct: 1159 SAQAAIIRSLLM*P 1200
>dbj|AG206902.1| Oryza sativa (japonica cultivar-group) DNA, clone:T10539T, 3'
flanking sequence of Tos17 insertion in rice strain
ND6042, genomic survey sequence
Length = 587
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 332 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 490
>gb|AACV01005954.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005954, whole
genome shotgun sequence
Length = 18781
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*P 493
Q ++++L+ETC+YI+SLH+EVDDLS+RLS+L+A+ D +S A IIRSLL *P
Sbjct: 7818 QVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*P 7660
Score = 33.6 bits (67), Expect(2) = 0.76
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3 / -1
Query: 637 EAAQGDLQLHQEPAPGGGRSE 575
E + GDLQLHQE A GG R E
Sbjct: 7804 EGSAGDLQLHQELASGGRRPE 7742
Score = 29.5 bits (58), Expect(2) = 0.76
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1 / -2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLKETCS 613
I++L+S+LQ LLP AR R + + CS
Sbjct: 8265 ISDLVSKLQDLLPEARLRSNDRVCNSMH*MVNCS 8164
>gb|AACV01019959.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019959, whole
genome shotgun sequence
Length = 13053
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRP 478
Q + ++L+ETCSYI+SLHREVDDLS+RL++L+A+ D ++ A +IR LL *P S P
Sbjct: 4936 QVPSARVLQETCSYIRSLHREVDDLSERLAELLAAADVSTAQAAVIRGLLM*PPSPPP 4763
Score = 42.3 bits (86), Expect = 0.069
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / -2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G E A GD+QLH EPAPGGGR +
Sbjct: 4934 GAVGEGAAGDVQLHPEPAPGGGRPQ 4860
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRP 478
Q + ++L+ETCSYI+SLHREVDDLS+RL++L+A+ D ++ A +IR LL *P S P
Sbjct: 3785703 QVPSARVLQETCSYIRSLHREVDDLSERLAELLAAADVSTAQAAVIRGLLM*PPSPPP 3785876
Score = 42.3 bits (86), Expect = 0.069
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G E A GD+QLH EPAPGGGR +
Sbjct: 3785705 GAVGEGAAGDVQLHPEPAPGGGRPQ 3785779
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 76.7 bits (161), Expect = 3e-012
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRP 478
Q + ++L+ETCSYI+SLHREVDDLS+RL++L+A+ D ++ A +IR LL *P S P
Sbjct: 13259514 QVPSARVLQETCSYIRSLHREVDDLSERLAELLAAADVSTAQAAVIRGLLM*PPSPPP 13259687
Score = 42.3 bits (86), Expect = 0.069
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3 / +2
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G E A GD+QLH EPAPGGGR +
Sbjct: 13259516 GAVGEGAAGDVQLHPEPAPGGGRPQ 13259590
>gb|AACV01010560.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010560, whole
genome shotgun sequence
Length = 6264
Score = 73.0 bits (153), Expect = 4e-011
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL *P + A
Sbjct: 2633 QGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*PIATDHAS 2812
Query: 471 RPRAPH 454
+ H
Sbjct: 2813 TDSSAH 2830
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / +1
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 2635 GLGGEGFAGDVQLHQEPAPGGGQPQ 2709
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 73.0 bits (153), Expect = 4e-011
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL *P + A
Sbjct: 86843 QGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*PIATDHAS 86664
Query: 471 RPRAPH 454
+ H
Sbjct: 86663 TDSSAH 86646
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 86841 GLGGEGFAGDVQLHQEPAPGGGQPQ 86767
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 73.0 bits (153), Expect = 4e-011
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL *P + A
Sbjct: 10367418 QGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*PIATDHAS 10367239
Query: 471 RPRAPH 454
+ H
Sbjct: 10367238 TDSSAH 10367221
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 10367416 GLGGEGFAGDVQLHQEPAPGGGQPQ 10367342
Score = 36.8 bits (74), Expect = 3.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 383 SGDGERPAVVHGWRETARAQMLHICGARGR 472
SG+G++P G RE RAQ +CG GR
Sbjct: 6815076 SGEGDQPMASMGEREKRRAQRARLCGGEGR 6815165
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 73.0 bits (153), Expect = 4e-011
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL *P + A
Sbjct: 29511517 QGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*PIATDHAS 29511338
Query: 471 RPRAPH 454
+ H
Sbjct: 29511337 TDSSAH 29511320
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 29511515 GLGGEGFAGDVQLHQEPAPGGGQPQ 29511441
Score = 36.8 bits (74), Expect = 3.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 383 SGDGERPAVVHGWRETARAQMLHICGARGR 472
SG+G++P G RE RAQ +CG GR
Sbjct: 25959175 SGEGDQPMASMGEREKRRAQRARLCGGEGR 25959264
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
complete sequence
Length = 150416
Score = 73.0 bits (153), Expect = 4e-011
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL *P + A
Sbjct: 51257 QGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*PIATDHAS 51078
Query: 471 RPRAPH 454
+ H
Sbjct: 51077 TDSSAH 51060
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 51255 GLGGEGFAGDVQLHQEPAPGGGQPQ 51181
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
complete sequence
Length = 126659
Score = 73.0 bits (153), Expect = 4e-011
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL *P + A
Sbjct: 86843 QGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*PIATDHAS 86664
Query: 471 RPRAPH 454
+ H
Sbjct: 86663 TDSSAH 86646
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 86841 GLGGEGFAGDVQLHQEPAPGGGQPQ 86767
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 73.0 bits (153), Expect = 4e-011
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLLR*PKSVRPAG 472
Q S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL *P + A
Sbjct: 32691822 QGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*PIATDHAS 32691643
Query: 471 RPRAPH 454
+ H
Sbjct: 32691642 TDSSAH 32691625
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 32691820 GLGGEGFAGDVQLHQEPAPGGGQPQ 32691746
Score = 36.8 bits (74), Expect = 3.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 383 SGDGERPAVVHGWRETARAQMLHICGARGR 472
SG+G++P G RE RAQ +CG GR
Sbjct: 29028890 SGEGDQPMASMGEREKRRAQRARLCGGEGR 29028979
>ref|XM_474070.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 315
Score = 72.1 bits (151), Expect = 7e-011
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -1 / +1
Query: 675 SARRRGGSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 502
S R G + S ++L+ETCSYI+SLH+EVD+LS+ L+ L+AS D S A +IRSLL
Sbjct: 136 SQARNGAHRGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLL 309
Score = 41.8 bits (85), Expect = 0.095
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3 / +3
Query: 649 GVDDEAAQGDLQLHQEPAPGGGRSE 575
G+ E GD+QLHQEPAPGGG+ +
Sbjct: 162 GLGGEGFAGDVQLHQEPAPGGGQPQ 236
>gb|AQ273895.1|AQ273895 nbxb0031L04r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0031L04r, DNA sequence
Length = 826
Score = 65.2 bits (136), Expect = 8e-009
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
Q+S +KLLKETCSYIKSLHREVDDLSD L DL+
Sbjct: 326 QSSASKLLKETCSYIKSLHREVDDLSDTLLDLI 424
Score = 48.3 bits (99), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3 / +1
Query: 637 EAAQGDLQLHQEPAPGGGR 581
EAAQGD+QLHQEPAPGGGR
Sbjct: 340 EAAQGDVQLHQEPAPGGGR 396
>gb|AU030987.1|AU030987 AU030987 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60530_1A, mRNA sequence
Length = 367
Score = 51.5 bits (106), Expect(2) = 6e-008
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = -1 / +2
Query: 714 INELISRLQTLLPSARRRGGSQASTTKLLK 625
INELIS+LQ+LLP++RR G S ASTTKLL+
Sbjct: 275 INELISKLQSLLPNSRRXGSSXASTTKLLE 364
Score = 35.4 bits (71), Expect = 7.7
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 629 SSFVVDAWLPPRRRALG 679
SSFVVDAWL P RR LG
Sbjct: 360 SSFVVDAWLEPXRRELG 310
Score = 29.5 bits (58), Expect(2) = 6e-008
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3 / +1
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVE +V LGGG+QRA+L+
Sbjct: 226 DDVEQKVVAWLHLGGGNQRAHLQ 294
>gb|C73165.1|C73165 C73165 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3194_1A, mRNA sequence
Length = 422
Score = 37.7 bits (76), Expect(2) = 7e-005
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 763 DDVEPEVPRVDGLGGGDQRAYLE 695
DDVEPEV + +GGGDQRA+L+
Sbjct: 273 DDVEPEVVALLRVGGGDQRAHLQ 341
Score = 32.7 bits (65), Expect(2) = 7e-005
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 678 PSARRRGGSQASTTKLLKET 619
P + GG QASTTKLLKET
Sbjct: 352 PPSSGGGGQQASTTKLLKET 411
>dbj|AK111303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-B06, full
insert sequence
Length = 580
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = -1 / +1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C YI+ LHRE D LS+RL++L+
Sbjct: 223 QASSAEVLQEACRYIRRLHREADALSERLAELL 321
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBa0007P22, complete sequence
Length = 148068
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = -1 / -1
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C YI+ LHRE D LS+RL++L+
Sbjct: 82986 QASSAEVLQEACRYIRRLHREADALSERLAELL 82888
>ref|NT_107132.1| Oryza sativa (japonica cultivar-group)
Length = 2337234
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C YI+ LHRE D LS+RL++L+
Sbjct: 1027580 QASSAEVLQEACRYIRRLHREADALSERLAELL 1027678
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = -1 / +3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C YI+ LHRE D LS+RL++L+
Sbjct: 22369830 QASSAEVLQEACRYIRRLHREADALSERLAELL 22369928
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 48.7 bits (100), Expect = 8e-004
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = -1 / +2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C YI+ LHRE D LS+RL++L+
Sbjct: 22679741 QASSAEVLQEACRYIRRLHREADALSERLAELL 22679839
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 43.7 bits (89), Expect(2) = 0.024
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C I+ LHRE D LS+RL++L+
Sbjct: 4234676 QASSAEVLQEACR*IRRLHREADALSERLAELL 4234578
Score = 32.2 bits (64), Expect(2) = 0.024
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1 / -3
Query: 501 R*PKSVRPAGRPRAPHICSICARAVSLHPWT 409
R* + RP PR S CAR HPW+
Sbjct: 1700839 R*AAATRPCRAPRPHQAASPCARTCRSHPWS 1700747
>gb|AACV01023501.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023501, whole
genome shotgun sequence
Length = 33616
Score = 43.7 bits (89), Expect = 0.025
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -1 / -2
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C I+ LHRE D LS+RL++L+
Sbjct: 12513 QASSAEVLQEACR*IRRLHREADALSERLAELL 12415
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 43.7 bits (89), Expect = 0.025
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -1 / -3
Query: 651 QASTTKLLKETCSYIKSLHREVDDLSDRLSDLM 553
QAS+ ++L+E C I+ LHRE D LS+RL++L+
Sbjct: 18399658 QASSAEVLQEACR*IRRLHREADALSERLAELL 18399560
>gb|AY872998.1|AY872998 04ET3_373_A_371_000_013G06 Oryza sativa (japonica cultivar-group)
transposon insertional mutants Oryza sativa (japonica
cultivar-group) genomic clone
04ET3_373_A_371_000_013G06, DNA sequence
Length = 113
Score = 41.8 bits (85), Expect = 0.090
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = -1 / -1
Query: 633 LLKETCSYIKSLHREVDDLSDRLSDLM 553
+L+E C YI+ LHRE D LS+RL++L+
Sbjct: 104 VLQEACRYIRRLHREADALSERLAELL 24
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 36.8 bits (74), Expect(2) = 0.60
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +3
Query: 383 SGDGERPAVVHGWRETARAQMLHICGARGR 472
SG+G++P G RE RAQ +CG GR
Sbjct: 2805642 SGEGDQPMASMGEREKRRAQRARLCGGEGR 2805731
Score = 33.6 bits (67), Expect(2) = 0.60
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3 / +1
Query: 282 NALPINKPALACRPWVYSAAICMGTHTHSA 371
++LP++ P++ C+ WV AA +GT T +A
Sbjct: 217927 SSLPLSLPSIRCKWWVAPAAARLGTRTAAA 218016
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
complete sequence
Length = 171551
Score = 33.6 bits (67), Expect(2) = 0.85
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3 / +2
Query: 282 NALPINKPALACRPWVYSAAICMGTHTHSA 371
++LP++ P++ C+ WV AA +GT T +A
Sbjct: 81983 SSLPLSLPSIRCKWWVAPAAARLGTRTAAA 82072
Score = 32.2 bits (64), Expect(2) = 0.85
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 388 RWREAGRRPWMERD 429
RWR GRRPW RD
Sbjct: 156915 RWRRRGRRPWRSRD 156956
>gb|AACV01025842.1| Oryza sativa (japonica cultivar-group) Ctg025842, whole genome
shotgun sequence
Length = 25477
Score = 32.7 bits (65), Expect(2) = 0.96
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2 / +1
Query: 470 GHARRIYAASARALSLSIHGRRPASRHRQISAHC 369
G R ASA L ++H RRPA R+++A C
Sbjct: 736 GRGTRAGTASALGLLAAMHARRPAGSLRRVAATC 837
Score = 23.1 bits (44), Expect(2) = 0.96
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3 / +2
Query: 379 QRIAECVCVPMHIAAEYTQGRQ 314
QRIA+ CVP + Q RQ
Sbjct: 854 QRIAQHRCVPAGVPRPQQQARQ 919
>ref|NT_107176.1| Oryza sativa (japonica cultivar-group)
Length = 1593847
Score = 29.0 bits (57), Expect(2) = 2.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1 / -3
Query: 403 GRRPWMERDSARADAAYMRRAWPAGR 480
G RPW R + A RR W AGR
Sbjct: 145880 GGRPWRGRRARGRGARRRRRTWRAGR 145803
Score = 24.4 bits (47), Expect(2) = 2.9
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +1 / -3
Query: 349 WVHTHTRQCAEIWRWREAGR 408
W R+ +WRWR R
Sbjct: 146045 WRRRRCRRTPSVWRWRSPER 145986
>gb|AACV01010345.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010345, whole
genome shotgun sequence
Length = 38902
Score = 36.8 bits (74), Expect = 3.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 383 SGDGERPAVVHGWRETARAQMLHICGARGR 472
SG+G++P G RE RAQ +CG GR
Sbjct: 31348 SGEGDQPMASMGEREKRRAQRARLCGGEGR 31437
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04,
complete sequence
Length = 164567
Score = 36.8 bits (74), Expect = 3.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2 / +1
Query: 383 SGDGERPAVVHGWRETARAQMLHICGARGR 472
SG+G++P G RE RAQ +CG GR
Sbjct: 95548 SGEGDQPMASMGEREKRRAQRARLCGGEGR 95637
>tpg|BK004879.1| TPA: Oryza sativa (japonica cultivar-group) growth-regulating
factor 10 (GRF10) gene, complete cds
Length = 4980
Score = 34.1 bits (68), Expect(2) = 3.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3 / +1
Query: 496 AQVRPSGRPATRAAYMQHLRARCLSPSMDDGRPLAIA 386
A VRPS P++RAA + RC+ PS P +A
Sbjct: 70 AAVRPSAAPSSRAAAIHRRLRRCMQPSAVQRPPTRLA 180
Score = 24.9 bits (48), Expect(2) = 3.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2 / +1
Query: 404 PASRHRQISAHCRVCVCT 351
PA R + CR C CT
Sbjct: 3166 PAPRRASTATSCRPCACT 3219
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1103G11
Length = 182931
Score = 29.0 bits (57), Expect(2) = 3.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1 / -3
Query: 403 GRRPWMERDSARADAAYMRRAWPAGR 480
G RPW R + A RR W AGR
Sbjct: 52219 GGRPWRGRRARGRGARRRRRTWRAGR 52142
Score = 24.4 bits (47), Expect(2) = 3.5
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +1 / -3
Query: 349 WVHTHTRQCAEIWRWREAGR 408
W R+ +WRWR R
Sbjct: 52384 WRRRRCRRTPSVWRWRSPER 52325
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0419H03
Length = 129020
Score = 29.0 bits (57), Expect(2) = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1 / -3
Query: 403 GRRPWMERDSARADAAYMRRAWPAGR 480
G RPW R + A RR W AGR
Sbjct: 108186 GGRPWRGRRARGRGARRRRRTWRAGR 108109
Score = 24.4 bits (47), Expect(2) = 3.6
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +1 / -3
Query: 349 WVHTHTRQCAEIWRWREAGR 408
W R+ +WRWR R
Sbjct: 108351 WRRRRCRRTPSVWRWRSPER 108292
>ref|NT_107234.1| Oryza sativa (japonica cultivar-group)
Length = 1126496
Score = 36.3 bits (73), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -1
Query: 393 ARGRPSSMDGERQRARRCCIYAARVAGR 476
A P+SMD R+RARR ++A R+AG+
Sbjct: 484571 AEAAPASMDAGRRRARRGAVFAQRLAGK 484488
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0018H04
Length = 142053
Score = 36.3 bits (73), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 393 ARGRPSSMDGERQRARRCCIYAARVAGR 476
A P+SMD R+RARR ++A R+AG+
Sbjct: 97325 AEAAPASMDAGRRRARRGAVFAQRLAGK 97242
>gb|AACV01014891.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014891, whole
genome shotgun sequence
Length = 22004
Score = 36.3 bits (73), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 393 ARGRPSSMDGERQRARRCCIYAARVAGR 476
A P+SMD R+RARR ++A R+AG+
Sbjct: 14929 AEAAPASMDAGRRRARRGAVFAQRLAGK 14846
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0621D05
Length = 180250
Score = 36.3 bits (73), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 393 ARGRPSSMDGERQRARRCCIYAARVAGR 476
A P+SMD R+RARR ++A R+AG+
Sbjct: 45408 AEAAPASMDAGRRRARRGAVFAQRLAGK 45325
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 36.3 bits (73), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -3
Query: 393 ARGRPSSMDGERQRARRCCIYAARVAGR 476
A P+SMD R+RARR ++A R+AG+
Sbjct: 10798137 AEAAPASMDAGRRRARRGAVFAQRLAGK 10798054
>gb|AACV01003397.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003397, whole
genome shotgun sequence
Length = 15205
Score = 29.0 bits (57), Expect(2) = 4.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1 / +2
Query: 403 GRRPWMERDSARADAAYMRRAWPAGR 480
G RPW R + A RR W AGR
Sbjct: 9575 GGRPWRGRRARGRGARRRRRTWRAGR 9652
Score = 24.4 bits (47), Expect(2) = 4.3
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +1 / +2
Query: 349 WVHTHTRQCAEIWRWREAGR 408
W R+ +WRWR R
Sbjct: 9410 WRRRRCRRTPSVWRWRSPER 9469
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0480E02
Length = 141862
Score = 29.5 bits (58), Expect(2) = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / -3
Query: 334 QLLYAWVHTHTRQCAEIWRWREAGR 408
Q+L ++H+ R A WRWR G+
Sbjct: 27671 QILRVYLHSARRWMAVSWRWRHKGQ 27597
Score = 23.5 bits (45), Expect(2) = 4.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 437 AQMLHICGARG 469
A++LH+CGA G
Sbjct: 27524 AKVLHLCGAHG 27492
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0056I22
Length = 147728
Score = 35.9 bits (72), Expect = 5.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1 / -2
Query: 367 RQCAEIWRWREAGRRPWMERDSARADAAYMRRAWPAGR 480
R CA +WR R G P +A A + RAWP R
Sbjct: 33979 RSCAWLWRRRSRGSTPRRTTTTAGAPRRWQSRAWPRKR 33866
>gb|AACV01025806.1| Oryza sativa (japonica cultivar-group) Ctg025806, whole genome
shotgun sequence
Length = 12892
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1 / -2
Query: 373 CAEIWRWREAGRRPWMERDSARADAAYMRRAWPAGRT 483
C W W G RPW R +A+ R+ PAGR+
Sbjct: 321 CRAAWPWPSVGCRPWPRRGLHLQVSAHCLRSRPAGRS 211
>ref|XM_466420.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1065
Score = 35.9 bits (72), Expect = 5.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1 / -2
Query: 367 RQCAEIWRWREAGRRPWMERDSARADAAYMRRAWPAGR 480
R CA +WR R G P +A A + RAWP R
Sbjct: 896 RSCAWLWRRRSRGSTPRRTTTTAGAPRRWQSRAWPRKR 783
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 35.9 bits (72), Expect = 5.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1 / -3
Query: 367 RQCAEIWRWREAGRRPWMERDSARADAAYMRRAWPAGR 480
R CA +WR R G P +A A + RAWP R
Sbjct: 3770410 RSCAWLWRRRSRGSTPRRTTTTAGAPRRWQSRAWPRKR 3770297
>gb|CH401328.1| Oryza sativa (japonica cultivar-group) scaffold000178 genomic
scaffold, whole genome shotgun sequence
Length = 28265
Score = 35.9 bits (72), Expect = 5.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1 / -3
Query: 373 CAEIWRWREAGRRPWMERDSARADAAYMRRAWPAGRT 483
C W W G RPW R +A+ R+ PAGR+
Sbjct: 321 CRAAWPWPSVGCRPWPRRGLHLQVSAHCLRSRPAGRS 211
>gb|AACV01000157.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000157, whole
genome shotgun sequence
Length = 18036
Score = 29.5 bits (58), Expect(2) = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +1
Query: 334 QLLYAWVHTHTRQCAEIWRWREAGR 408
Q+L ++H+ R A WRWR G+
Sbjct: 4312 QILRVYLHSARRWMAVSWRWRHKGQ 4386
Score = 23.5 bits (45), Expect(2) = 5.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 437 AQMLHICGARG 469
A++LH+CGA G
Sbjct: 4459 AKVLHLCGAHG 4491
>ref|XM_550075.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1158
Score = 29.5 bits (58), Expect(2) = 6.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 334 QLLYAWVHTHTRQCAEIWRWREAGR 408
Q+L ++H+ R A WRWR G+
Sbjct: 878 QILRVYLHSARRWMAVSWRWRHKGQ 804
Score = 23.5 bits (45), Expect(2) = 6.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 437 AQMLHICGARG 469
A++LH+CGA G
Sbjct: 731 AKVLHLCGAHG 699
>ref|NT_107223.1| Oryza sativa (japonica cultivar-group)
Length = 1494033
Score = 29.0 bits (57), Expect(2) = 6.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 420 GERQRARRCCIYAARVAGRPDGR 488
G R+RA R C AAR GR + R
Sbjct: 1458106 GRRRRASRVCSPAARAGGRGEAR 1458038
Score = 23.1 bits (44), Expect(2) = 6.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / -1
Query: 367 RQCAEIWRWREAG 405
R E WRW EAG
Sbjct: 1458249 RAAMEGWRWDEAG 1458211
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 27.2 bits (53), Expect(2) = 8.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3 / -3
Query: 420 GERQRARRCCIYAARVAGRPDGRTWAS 500
GER R R+ A R A DGR+WAS
Sbjct: 2402434 GERWRERQGGGIARRRAESYDGRSWAS 2402354
Score = 24.4 bits (47), Expect(2) = 8.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / -3
Query: 396 RGRPSSMDGERQRAR 440
RG SS GER+RAR
Sbjct: 2402482 RGNRSSASGERRRAR 2402438
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
complete sequence
Length = 153366
Score = 29.0 bits (57), Expect(2) = 8.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3 / -2
Query: 420 GERQRARRCCIYAARVAGRPDGR 488
G R+RA R C AAR GR + R
Sbjct: 67508 GRRRRASRVCSPAARAGGRGEAR 67440
Score = 23.1 bits (44), Expect(2) = 8.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / -3
Query: 367 RQCAEIWRWREAG 405
R E WRW EAG
Sbjct: 67651 RAAMEGWRWDEAG 67613
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
complete sequence
Length = 102275
Score = 29.0 bits (57), Expect(2) = 8.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 420 GERQRARRCCIYAARVAGRPDGR 488
G R+RA R C AAR GR + R
Sbjct: 66348 GRRRRASRVCSPAARAGGRGEAR 66280
Score = 23.1 bits (44), Expect(2) = 8.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / -1
Query: 367 RQCAEIWRWREAG 405
R E WRW EAG
Sbjct: 66491 RAAMEGWRWDEAG 66453
>ref|NT_107238.1| Oryza sativa (japonica cultivar-group)
Length = 1596585
Score = 28.1 bits (55), Expect(2) = 9.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 392 HRQISAHCRVCVCTHAYSS*IY 327
H + HCR+ +CT A S+ IY
Sbjct: 486772 HHHLHHHCRLDLCTAALSAAIY 486837
Score = 23.5 bits (45), Expect(2) = 9.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 495 PKSVRPAGRPRAPHICSICARAVSLHPWTTA 403
P +VRP+ P +P + S + +L TTA
Sbjct: 486671 PLAVRPSTSPTSPTLTSPTPGSTTLGSLTTA 486763
>gb|AACV01011058.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011058, whole
genome shotgun sequence
Length = 62254
Score = 29.0 bits (57), Expect(2) = 9.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 420 GERQRARRCCIYAARVAGRPDGR 488
G R+RA R C AAR GR + R
Sbjct: 16264 GRRRRASRVCSPAARAGGRGEAR 16196
Score = 23.1 bits (44), Expect(2) = 9.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / -2
Query: 367 RQCAEIWRWREAG 405
R E WRW EAG
Sbjct: 16407 RAAMEGWRWDEAG 16369
>gb|AACV01028033.1| Oryza sativa (japonica cultivar-group) Ctg028033, whole genome
shotgun sequence
Length = 6473
Score = 30.4 bits (60), Expect(3) = 9.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 297 NKPALACRPWVYSAA 341
N+PAL CRPWV + A
Sbjct: 5991 NRPALTCRPWVPTRA 5947
Score = 24.0 bits (46), Expect(3) = 9.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3 / -2
Query: 435 ARRCCIYAARVAGRPDGRTW 494
A RC AR AGRP +W
Sbjct: 2281 ATRCRTAHARRAGRPRAASW 2222
Score = 23.1 bits (44), Expect(3) = 9.5
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +2 / -2
Query: 392 GERPAVVHGWRETAR 436
G P +HGWR R
Sbjct: 3409 GRGPRALHGWRHRQR 3365
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,628,891,032
Number of Sequences: 438736
Number of extensions: 46471408
Number of successful extensions: 329644
Number of sequences better than 10.0: 127
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 178794812557
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)