TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5352090.2.1
(915 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK069336.1| Oryza sativa (japonica cultivar-group) cDNA... 106 4e-070
dbj|AK103873.1| Oryza sativa (japonica cultivar-group) cDNA... 171 1e-061
ref|XM_507200.1| PREDICTED Oryza sativa (japonica cultivar-... 171 1e-061
dbj|AK059644.1| Oryza sativa (japonica cultivar-group) cDNA... 171 1e-061
ref|XM_481813.1| Oryza sativa (japonica cultivar-group), mRNA 171 1e-061
gb|CA997937.1|CA997937 S234A1_B11 Rice cold stress germinat... 171 1e-061
gb|AACV01019464.1| Oryza sativa (japonica cultivar-group) c... 95 1e-052
gb|AU166120.1|AU166120 AU166120 Rice panicle shorter than 3... 106 2e-050
dbj|AP004011.3| Oryza sativa (japonica cultivar-group) geno... 95 3e-050
ref|XM_464312.1| Oryza sativa (japonica cultivar-group), mRNA 109 1e-041
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 95 3e-041
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 95 1e-040
gb|C74778.1|C74778 C74778 Rice cDNA from immature leaf incl... 101 1e-040
gb|CV728430.1|CV728430 COLD--01-G01.b1 Cold treated rice le... 105 1e-039
gb|D15824.1|D15824 RICC1356A Rice callus Oryza sativa (japo... 92 2e-038
dbj|AP004459.2| Oryza sativa (japonica cultivar-group) geno... 79 2e-036
dbj|AP004396.3| Oryza sativa (japonica cultivar-group) geno... 79 3e-036
dbj|AK119588.1| Oryza sativa (japonica cultivar-group) cDNA... 84 4e-034
dbj|AK059448.1| Oryza sativa (japonica cultivar-group) cDNA... 84 8e-034
ref|XM_467318.1| Oryza sativa (japonica cultivar-group), mRNA 84 8e-034
gb|CB656056.1|CB656056 OSJNEc09P11.f OSJNEc Oryza sativa (j... 74 3e-031
gb|CA998296.1|CA998296 S345B_C01 Rice cold stress germinati... 76 6e-029
dbj|AK100282.1| Oryza sativa (japonica cultivar-group) cDNA... 76 5e-028
dbj|AK069306.1| Oryza sativa (japonica cultivar-group) cDNA... 66 8e-027
dbj|AK061987.1| Oryza sativa (japonica cultivar-group) cDNA... 66 8e-027
dbj|AK067645.1| Oryza sativa (japonica cultivar-group) cDNA... 74 8e-027
ref|XM_479582.1| Oryza sativa (japonica cultivar-group), mRNA 74 8e-027
ref|XM_475467.1| Oryza sativa (japonica cultivar-group), p... 66 9e-027
dbj|AK106400.1| Oryza sativa (japonica cultivar-group) cDNA... 79 2e-026
ref|XM_473755.1| Oryza sativa (japonica cultivar-group), p... 79 2e-026
gb|CB665543.1|CB665543 OSJNEd12A13.f OSJNEd Oryza sativa (j... 66 2e-026
gb|CF325238.1|CF325238 JMT1--02-L04.g1 AtJMT-overexpressing... 66 4e-026
dbj|AK071731.1| Oryza sativa (japonica cultivar-group) cDNA... 65 5e-026
gb|AU065238.1|AU065238 AU065238 Rice cDNA from immature lea... 65 5e-026
gb|CB649467.1|CB649467 OSJNEb13G15.f OSJNEb Oryza sativa (j... 76 7e-026
dbj|AK065704.1| Oryza sativa (japonica cultivar-group) cDNA... 64 5e-025
ref|XM_464081.1| Oryza sativa (japonica cultivar-group), mRNA 64 5e-025
ref|XM_481816.1| Oryza sativa (japonica cultivar-group), mRNA 59 9e-025
dbj|AK103241.1| Oryza sativa (japonica cultivar-group) cDNA... 61 2e-024
gb|CB656351.1|CB656351 OSJNEc10J17.f OSJNEc Oryza sativa (j... 61 2e-024
dbj|AK101951.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-023
ref|XM_474250.1| Oryza sativa (japonica cultivar-group), p... 62 1e-023
gb|AACV01005235.1| Oryza sativa (japonica cultivar-group) c... 72 2e-023
gb|AACV01018197.1| Oryza sativa (japonica cultivar-group) c... 53 4e-023
dbj|AK067950.1| Oryza sativa (japonica cultivar-group) cDNA... 59 5e-023
dbj|AK060648.1| Oryza sativa (japonica cultivar-group) cDNA... 59 5e-023
dbj|AP005772.3| Oryza sativa (japonica cultivar-group) geno... 73 8e-023
gb|AACV01014747.1| Oryza sativa (japonica cultivar-group) c... 72 3e-022
dbj|AK063486.1| Oryza sativa (japonica cultivar-group) cDNA... 54 1e-021
dbj|AK109510.1| Oryza sativa (japonica cultivar-group) cDNA... 54 1e-021
gb|AACV01003448.1| Oryza sativa (japonica cultivar-group) c... 73 2e-021
>dbj|AK069336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010K22, full
insert sequence
Length = 2703
Score = 106 bits (227), Expect(5) = 4e-070
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3 / +3
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G A R+ GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK
Sbjct: 357 GGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 506
Score = 99.1 bits (210), Expect(6) = 3e-061
Identities = 41/51 (80%), Positives = 42/51 (82%)
Frame = -3 / -3
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVAPSP 269
+ GVAFSGPPSWATASTKRSWRSAVHR GLGSAVSTRLGPP R A P
Sbjct: 508 VLGVAFSGPPSWATASTKRSWRSAVHRRRGLGSAVSTRLGPPPAARPASPP 356
Score = 91.3 bits (193), Expect(5) = 4e-070
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +2 / +1
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
ASYLLDAQ GMSVS RV QD+KE+QEVKEALRAQME+QRRLHEQVE
Sbjct: 2023 ASYLLDAQGGMSVSHRVSTQDVKENQEVKEALRAQMEMQRRLHEQVE 2163
Score = 91.3 bits (193), Expect(5) = 4e-070
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
++ K ILRTMGVKGLTLFHLKSHLQKYRLGKQSGKE SEQSKD
Sbjct: 492 KATPKTILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEASEQSKD 623
Score = 84.9 bits (179), Expect(6) = 3e-061
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = -3 / -1
Query: 676 LHLFMQSSLDFHLRSQCFFNFLAFFHILGRNSRGHAHSTLSI*KIGC 536
LHLFMQSSL FHL SQCF + L FF+IL RNS H HSTL I*KIGC
Sbjct: 2163 LHLFMQSSLHFHLSSQCFLDLLIFFNILSRNSMRHTHSTLGI*KIGC 2023
Score = 75.3 bits (158), Expect(6) = 3e-061
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -1 / -3
Query: 534 SLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKIFL 415
SLDCSD S PDCFP+LYF*R LFK KRV P TPIVLKI L
Sbjct: 622 SLDCSDASFPDCFPSLYF*R*LFKWKRVSPFTPIVLKIVL 503
Score = 73.0 bits (153), Expect(4) = 1e-031
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2 / -2
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPA 297
F CCFLG+AELG GVDE LVEVGRPP+ GLG+ Q++A P+
Sbjct: 506 FRCCFLGAAELGDGVDEALVEVGRPPEAGLGIGGQHQAGPS 384
Score = 65.2 bits (136), Expect(4) = 3e-025
Identities = 27/48 (56%), Positives = 30/48 (62%)
Frame = +3 / +2
Query: 537 HPIF*MLKVE*ACPLEFLPRIXXXXXXXXXH*ERRWKSKEDCMNKWSS 680
HPIF*M KVE* C +EFL ++ H E RWK EDCMNKW S
Sbjct: 2024 HPIF*MPKVE*VCRIEFLLKMLKKIKRSRKHCELRWKCNEDCMNKWRS 2167
Score = 61.6 bits (128), Expect(4) = 3e-025
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3 / +1
Query: 399 PEKATPKIS*GQWASRVLLFFT*RAIFRNTD*GNNLVRRDQSNLKM 536
P K K+S*GQW R LF T*R IFRN D GNNL +R +SNLKM
Sbjct: 487 PRKQHLKLS*GQWV*RGSLFST*RVIFRNIDWGNNLEKRHRSNLKM 624
Score = 55.1 bits (114), Expect(4) = 1e-031
Identities = 31/48 (64%), Positives = 33/48 (68%)
Frame = -1 / -2
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DAS 532
STCSCSL SI A +ASLTS S S TL DTLIP ASRR*DA+
Sbjct: 2162 STCSCSLRCISI*ARNASLTS*FSLTS*VETLCDTLIPPWASRR*DAA 2019
Score = 48.3 bits (99), Expect(4) = 1e-031
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -3 / -2
Query: 499 FP*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSG 398
FP S+FLKM LQV+KS+ L HCP D F F G
Sbjct: 587 FPQSIFLKMTLQVEKSEPLHTHCPQDSFRCCFLG 486
Score = 37.7 bits (76), Expect(6) = 3e-061
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -3
Query: 280 APSPGTGASGRWWIRPGGNI 221
A P + SGRWWI PGGNI
Sbjct: 379 AARPASPPSGRWWISPGGNI 320
Score = 37.7 bits (76), Expect(5) = 4e-070
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 222 MFPPGLIHHRPDAPVPGDGA 281
MFPPGLIHHRPD G A
Sbjct: 321 MFPPGLIHHRPDGGEAGRAA 380
Score = 31.8 bits (63), Expect(4) = 3e-025
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1 / +1
Query: 328 PSPGCGGRXXXXXXXXXXXXXXADPRKQHQK 420
PSP GGR A PRKQH K
Sbjct: 415 PSPASGGRPTSTSASSTPSPSSAAPRKQHLK 507
Score = 29.9 bits (59), Expect(4) = 1e-031
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -2 / -2
Query: 257 VRAVVDQARREHXXXXXXXXLAPSARMERGQRGAFSFPQKRRIQSEK 117
VR VVDQ RREH R E + F+ P K +EK
Sbjct: 356 VRPVVDQPRREHLLLFLLPPRRQQGREEERKDETFAAPPKSGGSNEK 216
Score = 29.5 bits (58), Expect(5) = 4e-070
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2 / +1
Query: 47 ESGTSSRAEARTSKKGERESGRTFSRIGSFAFGGRRRPLSVLSPS 181
+ G SR + R SKK ERE R + GG + S LS S
Sbjct: 145 QQGRGSRQQQRRSKKQERERKRWDFSLDPPLLGGAAKVSSFLSSS 279
Score = 26.3 bits (51), Expect(4) = 3e-025
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 56 TSSRAEARTSKKGERESGRTFSRIGSF 136
+SSR EA S +GE S + +G+F
Sbjct: 140 SSSRGEAAGSSRGEARSKKERESVGTF 220
Score = 25.4 bits (49), Expect(6) = 3e-061
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3 / -3
Query: 85 AGSCFCPAASAAFHWQR 35
A +C A+AAF WQR
Sbjct: 172 AAACCLSPAAAAFQWQR 122
Score = 23.5 bits (45), Expect(6) = 3e-061
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 162 RGLLLPPKAKDPIR 121
R LLL PKA+DP++
Sbjct: 259 RPLLLLPKAEDPMK 218
>dbj|AK103873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149L11, full
insert sequence
Length = 1201
Score = 171 bits (367), Expect(2) = 1e-061
Identities = 72/91 (79%), Positives = 82/91 (90%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTMGVKGLTLFHLKSHLQKYRLGKQSGKE +EQSKDASY+L AQSG ++SP
Sbjct: 294 KATPKTIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKEMAEQSKDASYILGAQSGTNLSPT 473
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
VP D+KESQE+KEALRAQMEVQR+LHEQVE
Sbjct: 474 VPTPDLKESQELKEALRAQMEVQRKLHEQVE 566
Score = 142 bits (304), Expect(3) = 1e-051
Identities = 63/87 (72%), Positives = 69/87 (79%)
Frame = -1 / -1
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCF 496
STCSC+ TSICALSAS +S LSF S GT+GD +PL*A + *+AS DCS SLPDCF
Sbjct: 565 STCSCNFRCTSICALSASFSS*LSFKSGVGTVGDRFVPL*APKI*EASFDCSAISLPDCF 386
Query: 495 PNLYF*RWLFK*KRVRPLTPIVLKIFL 415
PNLYF*RWLFK*KRVRP TPIVL I L
Sbjct: 385 PNLYF*RWLFK*KRVRPFTPIVLMIVL 305
Score = 100 bits (213), Expect(2) = 5e-027
Identities = 51/95 (53%), Positives = 58/95 (61%)
Frame = +3 / +1
Query: 396 GPEKATPKIS*GQWASRVLLFFT*RAIFRNTD*GNNLVRRDQSNLKMHPIF*MLKVE*AC 575
GP K PK+S*GQW RV FFT*+A FRNTD* +NL +R QSN K IF LKVE
Sbjct: 286 GPTKQHPKLS*GQWV*RVSPFFT*KATFRNTD*ESNLAKRWQSNQKTLLIFWELKVEQIY 465
Query: 576 PLEFLPRIXXXXXXXXXH*ERRWKSKEDCMNKWSS 680
L+F +I H E RWK E+CMNKW S
Sbjct: 466 LLQFQLQI*KRVKN*KKHSEHRWKCNENCMNKWRS 570
Score = 97.3 bits (206), Expect(3) = 1e-036
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = -3 / -3
Query: 676 LHLFMQSSLDFHLRSQCFFNFLAFFHILGRNSRGHAHSTLSI*KIGCIFXXXXXXXXXLF 497
LHLFMQ SL FHL S+CFF FL F I N R STLS I +F L
Sbjct: 566 LHLFMQFSLHFHLCSECFF*FLTLFQIWSWNCRR*ICSTLSSQNIRSVF*LLCHLFARLL 387
Query: 496 P*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSGP 395
*SVFLK+A QVKK +TL HCP D FG F GP
Sbjct: 386 S*SVFLKVAFQVKKGETLHTHCPHDSFGCCFVGP 285
Score = 90.9 bits (192), Expect(2) = 1e-061
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3 / +3
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+KATPK
Sbjct: 180 GGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPDKATPK 308
Score = 81.7 bits (172), Expect(3) = 1e-051
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -1
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ GVA SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 310 VLGVALSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 197
Score = 76.2 bits (160), Expect(3) = 1e-036
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -2 / -3
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPAGAGACRPI 273
F CCF+G AELG GVDE +VEVGRPPQ GLGV RQY+A A A I
Sbjct: 308 FGCCFVGPAELGDGVDEAVVEVGRPPQAGLGVGRQYQAGAAPPAAAADI 162
Score = 45.1 bits (92), Expect(2) = 5e-027
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +1 / +1
Query: 274 MGRHAPAPAGRALY*RRTPSPGCGGRXXXXXXXXXXXXXXADPRKQHQK 420
M A A A Y*R TPSP CGGR A P KQH K
Sbjct: 163 MSAAAAGGAAPAWY*RPTPSPACGGRPTSTTASSTPSPSSAGPTKQHPK 309
Score = 23.1 bits (44), Expect(3) = 1e-051
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / -1
Query: 247 WWIRPG 230
WWIRPG
Sbjct: 142 WWIRPG 125
Score = 22.6 bits (43), Expect(3) = 1e-036
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3 / -1
Query: 277 PSPGTGASGRWWIRPGGNI 221
P P + + RWW GNI
Sbjct: 175 PPPTSASRRRWWWIRPGNI 119
>ref|XM_507200.1| PREDICTED Oryza sativa (japonica cultivar-group), P0410E11.132-1
mRNA
Length = 1202
Score = 171 bits (367), Expect(2) = 1e-061
Identities = 72/91 (79%), Positives = 82/91 (90%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTMGVKGLTLFHLKSHLQKYRLGKQSGKE +EQSKDASY+L AQSG ++SP
Sbjct: 295 KATPKTIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKEMAEQSKDASYILGAQSGTNLSPT 474
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
VP D+KESQE+KEALRAQMEVQR+LHEQVE
Sbjct: 475 VPTPDLKESQELKEALRAQMEVQRKLHEQVE 567
Score = 142 bits (304), Expect(3) = 1e-051
Identities = 63/87 (72%), Positives = 69/87 (79%)
Frame = -1 / -1
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCF 496
STCSC+ TSICALSAS +S LSF S GT+GD +PL*A + *+AS DCS SLPDCF
Sbjct: 566 STCSCNFRCTSICALSASFSS*LSFKSGVGTVGDRFVPL*APKI*EASFDCSAISLPDCF 387
Query: 495 PNLYF*RWLFK*KRVRPLTPIVLKIFL 415
PNLYF*RWLFK*KRVRP TPIVL I L
Sbjct: 386 PNLYF*RWLFK*KRVRPFTPIVLMIVL 306
Score = 100 bits (213), Expect(2) = 5e-027
Identities = 51/95 (53%), Positives = 58/95 (61%)
Frame = +3 / +2
Query: 396 GPEKATPKIS*GQWASRVLLFFT*RAIFRNTD*GNNLVRRDQSNLKMHPIF*MLKVE*AC 575
GP K PK+S*GQW RV FFT*+A FRNTD* +NL +R QSN K IF LKVE
Sbjct: 287 GPTKQHPKLS*GQWV*RVSPFFT*KATFRNTD*ESNLAKRWQSNQKTLLIFWELKVEQIY 466
Query: 576 PLEFLPRIXXXXXXXXXH*ERRWKSKEDCMNKWSS 680
L+F +I H E RWK E+CMNKW S
Sbjct: 467 LLQFQLQI*KRVKN*KKHSEHRWKCNENCMNKWRS 571
Score = 97.3 bits (206), Expect(3) = 1e-036
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = -3 / -3
Query: 676 LHLFMQSSLDFHLRSQCFFNFLAFFHILGRNSRGHAHSTLSI*KIGCIFXXXXXXXXXLF 497
LHLFMQ SL FHL S+CFF FL F I N R STLS I +F L
Sbjct: 567 LHLFMQFSLHFHLCSECFF*FLTLFQIWSWNCRR*ICSTLSSQNIRSVF*LLCHLFARLL 388
Query: 496 P*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSGP 395
*SVFLK+A QVKK +TL HCP D FG F GP
Sbjct: 387 S*SVFLKVAFQVKKGETLHTHCPHDSFGCCFVGP 286
Score = 90.9 bits (192), Expect(2) = 1e-061
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3 / +1
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+KATPK
Sbjct: 181 GGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPDKATPK 309
Score = 81.7 bits (172), Expect(3) = 1e-051
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -1
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ GVA SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 311 VLGVALSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 198
Score = 76.2 bits (160), Expect(3) = 1e-036
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -2 / -3
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPAGAGACRPI 273
F CCF+G AELG GVDE +VEVGRPPQ GLGV RQY+A A A I
Sbjct: 309 FGCCFVGPAELGDGVDEAVVEVGRPPQAGLGVGRQYQAGAAPPAAAADI 163
Score = 45.1 bits (92), Expect(2) = 5e-027
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +1 / +2
Query: 274 MGRHAPAPAGRALY*RRTPSPGCGGRXXXXXXXXXXXXXXADPRKQHQK 420
M A A A Y*R TPSP CGGR A P KQH K
Sbjct: 164 MSAAAAGGAAPAWY*RPTPSPACGGRPTSTTASSTPSPSSAGPTKQHPK 310
Score = 23.1 bits (44), Expect(3) = 1e-051
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / -1
Query: 247 WWIRPG 230
WWIRPG
Sbjct: 143 WWIRPG 126
Score = 22.6 bits (43), Expect(3) = 1e-036
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3 / -1
Query: 277 PSPGTGASGRWWIRPGGNI 221
P P + + RWW GNI
Sbjct: 176 PPPTSASRRRWWWIRPGNI 120
>dbj|AK059644.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B12, full
insert sequence
Length = 1175
Score = 171 bits (367), Expect(2) = 1e-061
Identities = 72/91 (79%), Positives = 82/91 (90%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTMGVKGLTLFHLKSHLQKYRLGKQSGKE +EQSKDASY+L AQSG ++SP
Sbjct: 251 KATPKTIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKEMAEQSKDASYILGAQSGTNLSPT 430
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
VP D+KESQE+KEALRAQMEVQR+LHEQVE
Sbjct: 431 VPTPDLKESQELKEALRAQMEVQRKLHEQVE 523
Score = 142 bits (304), Expect(3) = 1e-051
Identities = 63/87 (72%), Positives = 69/87 (79%)
Frame = -1 / -3
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCF 496
STCSC+ TSICALSAS +S LSF S GT+GD +PL*A + *+AS DCS SLPDCF
Sbjct: 522 STCSCNFRCTSICALSASFSS*LSFKSGVGTVGDRFVPL*APKI*EASFDCSAISLPDCF 343
Query: 495 PNLYF*RWLFK*KRVRPLTPIVLKIFL 415
PNLYF*RWLFK*KRVRP TPIVL I L
Sbjct: 342 PNLYF*RWLFK*KRVRPFTPIVLMIVL 262
Score = 100 bits (213), Expect(2) = 5e-027
Identities = 51/95 (53%), Positives = 58/95 (61%)
Frame = +3 / +3
Query: 396 GPEKATPKIS*GQWASRVLLFFT*RAIFRNTD*GNNLVRRDQSNLKMHPIF*MLKVE*AC 575
GP K PK+S*GQW RV FFT*+A FRNTD* +NL +R QSN K IF LKVE
Sbjct: 243 GPTKQHPKLS*GQWV*RVSPFFT*KATFRNTD*ESNLAKRWQSNQKTLLIFWELKVEQIY 422
Query: 576 PLEFLPRIXXXXXXXXXH*ERRWKSKEDCMNKWSS 680
L+F +I H E RWK E+CMNKW S
Sbjct: 423 LLQFQLQI*KRVKN*KKHSEHRWKCNENCMNKWRS 527
Score = 97.3 bits (206), Expect(3) = 1e-036
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = -3 / -2
Query: 676 LHLFMQSSLDFHLRSQCFFNFLAFFHILGRNSRGHAHSTLSI*KIGCIFXXXXXXXXXLF 497
LHLFMQ SL FHL S+CFF FL F I N R STLS I +F L
Sbjct: 523 LHLFMQFSLHFHLCSECFF*FLTLFQIWSWNCRR*ICSTLSSQNIRSVF*LLCHLFARLL 344
Query: 496 P*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSGP 395
*SVFLK+A QVKK +TL HCP D FG F GP
Sbjct: 343 S*SVFLKVAFQVKKGETLHTHCPHDSFGCCFVGP 242
Score = 90.9 bits (192), Expect(2) = 1e-061
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3 / +2
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+KATPK
Sbjct: 137 GGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPDKATPK 265
Score = 81.7 bits (172), Expect(3) = 1e-051
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -3
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ GVA SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 267 VLGVALSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 154
Score = 76.2 bits (160), Expect(3) = 1e-036
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -2 / -2
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPAGAGACRPI 273
F CCF+G AELG GVDE +VEVGRPPQ GLGV RQY+A A A I
Sbjct: 265 FGCCFVGPAELGDGVDEAVVEVGRPPQAGLGVGRQYQAGAAPPAAAADI 119
Score = 45.1 bits (92), Expect(2) = 5e-027
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +1 / +3
Query: 274 MGRHAPAPAGRALY*RRTPSPGCGGRXXXXXXXXXXXXXXADPRKQHQK 420
M A A A Y*R TPSP CGGR A P KQH K
Sbjct: 120 MSAAAAGGAAPAWY*RPTPSPACGGRPTSTTASSTPSPSSAGPTKQHPK 266
Score = 23.1 bits (44), Expect(3) = 1e-051
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / -3
Query: 247 WWIRPG 230
WWIRPG
Sbjct: 99 WWIRPG 82
Score = 22.6 bits (43), Expect(3) = 1e-036
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3 / -3
Query: 277 PSPGTGASGRWWIRPGGNI 221
P P + + RWW GNI
Sbjct: 132 PPPTSASRRRWWWIRPGNI 76
>ref|XM_481813.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1175
Score = 171 bits (367), Expect(2) = 1e-061
Identities = 72/91 (79%), Positives = 82/91 (90%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTMGVKGLTLFHLKSHLQKYRLGKQSGKE +EQSKDASY+L AQSG ++SP
Sbjct: 251 KATPKTIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKEMAEQSKDASYILGAQSGTNLSPT 430
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
VP D+KESQE+KEALRAQMEVQR+LHEQVE
Sbjct: 431 VPTPDLKESQELKEALRAQMEVQRKLHEQVE 523
Score = 142 bits (304), Expect(3) = 1e-051
Identities = 63/87 (72%), Positives = 69/87 (79%)
Frame = -1 / -3
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCF 496
STCSC+ TSICALSAS +S LSF S GT+GD +PL*A + *+AS DCS SLPDCF
Sbjct: 522 STCSCNFRCTSICALSASFSS*LSFKSGVGTVGDRFVPL*APKI*EASFDCSAISLPDCF 343
Query: 495 PNLYF*RWLFK*KRVRPLTPIVLKIFL 415
PNLYF*RWLFK*KRVRP TPIVL I L
Sbjct: 342 PNLYF*RWLFK*KRVRPFTPIVLMIVL 262
Score = 100 bits (213), Expect(2) = 5e-027
Identities = 51/95 (53%), Positives = 58/95 (61%)
Frame = +3 / +3
Query: 396 GPEKATPKIS*GQWASRVLLFFT*RAIFRNTD*GNNLVRRDQSNLKMHPIF*MLKVE*AC 575
GP K PK+S*GQW RV FFT*+A FRNTD* +NL +R QSN K IF LKVE
Sbjct: 243 GPTKQHPKLS*GQWV*RVSPFFT*KATFRNTD*ESNLAKRWQSNQKTLLIFWELKVEQIY 422
Query: 576 PLEFLPRIXXXXXXXXXH*ERRWKSKEDCMNKWSS 680
L+F +I H E RWK E+CMNKW S
Sbjct: 423 LLQFQLQI*KRVKN*KKHSEHRWKCNENCMNKWRS 527
Score = 97.3 bits (206), Expect(3) = 1e-036
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = -3 / -2
Query: 676 LHLFMQSSLDFHLRSQCFFNFLAFFHILGRNSRGHAHSTLSI*KIGCIFXXXXXXXXXLF 497
LHLFMQ SL FHL S+CFF FL F I N R STLS I +F L
Sbjct: 523 LHLFMQFSLHFHLCSECFF*FLTLFQIWSWNCRR*ICSTLSSQNIRSVF*LLCHLFARLL 344
Query: 496 P*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSGP 395
*SVFLK+A QVKK +TL HCP D FG F GP
Sbjct: 343 S*SVFLKVAFQVKKGETLHTHCPHDSFGCCFVGP 242
Score = 90.9 bits (192), Expect(2) = 1e-061
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3 / +2
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+KATPK
Sbjct: 137 GGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPDKATPK 265
Score = 81.7 bits (172), Expect(3) = 1e-051
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -3
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ GVA SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 267 VLGVALSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 154
Score = 76.2 bits (160), Expect(3) = 1e-036
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -2 / -2
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPAGAGACRPI 273
F CCF+G AELG GVDE +VEVGRPPQ GLGV RQY+A A A I
Sbjct: 265 FGCCFVGPAELGDGVDEAVVEVGRPPQAGLGVGRQYQAGAAPPAAAADI 119
Score = 45.1 bits (92), Expect(2) = 5e-027
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +1 / +3
Query: 274 MGRHAPAPAGRALY*RRTPSPGCGGRXXXXXXXXXXXXXXADPRKQHQK 420
M A A A Y*R TPSP CGGR A P KQH K
Sbjct: 120 MSAAAAGGAAPAWY*RPTPSPACGGRPTSTTASSTPSPSSAGPTKQHPK 266
Score = 23.1 bits (44), Expect(3) = 1e-051
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / -3
Query: 247 WWIRPG 230
WWIRPG
Sbjct: 99 WWIRPG 82
Score = 22.6 bits (43), Expect(3) = 1e-036
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3 / -3
Query: 277 PSPGTGASGRWWIRPGGNI 221
P P + + RWW GNI
Sbjct: 132 PPPTSASRRRWWWIRPGNI 76
>gb|CA997937.1|CA997937 S234A1_B11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 746
Score = 171 bits (367), Expect(2) = 1e-061
Identities = 72/91 (79%), Positives = 82/91 (90%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+RTMGVKGLTLFHLKSHLQKYRLGKQSGKE +EQSKDASY+L AQSG ++SP
Sbjct: 299 KATPKTIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKEMAEQSKDASYILGAQSGTNLSPT 478
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
VP D+KESQE+KEALRAQMEVQR+LHEQVE
Sbjct: 479 VPTPDLKESQELKEALRAQMEVQRKLHEQVE 571
Score = 142 bits (304), Expect(3) = 1e-051
Identities = 63/87 (72%), Positives = 69/87 (79%)
Frame = -1 / -3
Query: 675 STCSCSLLWTSICALSASLTSWLSFISWAGTLGDTLIPL*ASRR*DASLDCSDPSLPDCF 496
STCSC+ TSICALSAS +S LSF S GT+GD +PL*A + *+AS DCS SLPDCF
Sbjct: 570 STCSCNFRCTSICALSASFSS*LSFKSGVGTVGDRFVPL*APKI*EASFDCSAISLPDCF 391
Query: 495 PNLYF*RWLFK*KRVRPLTPIVLKIFL 415
PNLYF*RWLFK*KRVRP TPIVL I L
Sbjct: 390 PNLYF*RWLFK*KRVRPFTPIVLMIVL 310
Score = 100 bits (213), Expect(2) = 6e-027
Identities = 51/95 (53%), Positives = 58/95 (61%)
Frame = +3 / +3
Query: 396 GPEKATPKIS*GQWASRVLLFFT*RAIFRNTD*GNNLVRRDQSNLKMHPIF*MLKVE*AC 575
GP K PK+S*GQW RV FFT*+A FRNTD* +NL +R QSN K IF LKVE
Sbjct: 291 GPTKQHPKLS*GQWV*RVSPFFT*KATFRNTD*ESNLAKRWQSNQKTLLIFWELKVEQIY 470
Query: 576 PLEFLPRIXXXXXXXXXH*ERRWKSKEDCMNKWSS 680
L+F +I H E RWK E+CMNKW S
Sbjct: 471 LLQFQLQI*KRVKN*KKHSEHRWKCNENCMNKWRS 575
Score = 97.3 bits (206), Expect(3) = 1e-036
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = -3 / -2
Query: 676 LHLFMQSSLDFHLRSQCFFNFLAFFHILGRNSRGHAHSTLSI*KIGCIFXXXXXXXXXLF 497
LHLFMQ SL FHL S+CFF FL F I N R STLS I +F L
Sbjct: 571 LHLFMQFSLHFHLCSECFF*FLTLFQIWSWNCRR*ICSTLSSQNIRSVF*LLCHLFARLL 392
Query: 496 P*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSGP 395
*SVFLK+A QVKK +TL HCP D FG F GP
Sbjct: 391 S*SVFLKVAFQVKKGETLHTHCPHDSFGCCFVGP 290
Score = 90.9 bits (192), Expect(2) = 1e-061
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3 / +2
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+KATPK
Sbjct: 185 GGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPDKATPK 313
Score = 81.7 bits (172), Expect(3) = 1e-051
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -3
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ GVA SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 315 VLGVALSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 202
Score = 76.2 bits (160), Expect(3) = 1e-036
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -2 / -2
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPAGAGACRPI 273
F CCF+G AELG GVDE +VEVGRPPQ GLGV RQY+A A A I
Sbjct: 313 FGCCFVGPAELGDGVDEAVVEVGRPPQAGLGVGRQYQAGAAPPAAAADI 167
Score = 45.1 bits (92), Expect(2) = 6e-027
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = +1 / +3
Query: 274 MGRHAPAPAGRALY*RRTPSPGCGGRXXXXXXXXXXXXXXADPRKQHQK 420
M A A A Y*R TPSP CGGR A P KQH K
Sbjct: 168 MSAAAAGGAAPAWY*RPTPSPACGGRPTSTTASSTPSPSSAGPTKQHPK 314
Score = 23.1 bits (44), Expect(3) = 1e-051
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / -3
Query: 247 WWIRPG 230
WWIRPG
Sbjct: 147 WWIRPG 130
Score = 22.6 bits (43), Expect(3) = 1e-036
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3 / -3
Query: 277 PSPGTGASGRWWIRPGGNI 221
P P + + RWW GNI
Sbjct: 180 PPPTSASRRRWWWIRPGNI 124
>gb|AACV01019464.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019464, whole
genome shotgun sequence
Length = 48805
Score = 95.0 bits (201), Expect(7) = 1e-052
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3 / -2
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G A R+ GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE
Sbjct: 13284 GGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 13150
Score = 90.4 bits (191), Expect(6) = 2e-041
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = -3 / +2
Query: 412 VAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVAPSP 269
++ SGPPSWATASTKRSWRSAVHR GLGSAVSTRLGPP R A P
Sbjct: 13142 ISLSGPPSWATASTKRSWRSAVHRRRGLGSAVSTRLGPPPAARPASPP 13285
Score = 53.8 bits (111), Expect(7) = 1e-052
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2 / -3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K ILRTMGVKGLTLFHLKSHLQ
Sbjct: 10316 EATPKTILRTMGVKGLTLFHLKSHLQ 10239
Score = 50.6 bits (104), Expect(7) = 1e-052
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2 / -1
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
+QEVKEALRAQME+QRRLHEQVE
Sbjct: 8512 NQEVKEALRAQMEMQRRLHEQVE 8444
Score = 47.8 bits (98), Expect(7) = 1e-052
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKE 607
ASYLLDAQ GMSVSPRV QD+KE
Sbjct: 8711 ASYLLDAQGGMSVSPRVSTQDVKE 8640
Score = 44.6 bits (91), Expect(7) = 1e-052
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -1
Query: 479 QKYRLGKQSGKEGSEQSKD 535
QKYRLGKQSGKE SEQSKD
Sbjct: 10168 QKYRLGKQSGKEASEQSKD 10112
Score = 44.6 bits (91), Expect(6) = 2e-041
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 604 FHILGRNSRGHAHSTLSI*KIGC 536
F+IL RNSR H HSTL I*KIGC
Sbjct: 8643 FNILSRNSRRHTHSTLGI*KIGC 8711
Score = 43.7 bits (89), Expect(6) = 2e-041
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / +3
Query: 534 SLDCSDPSLPDCFPNLYF 481
SLDCSD S PDCFP+LYF
Sbjct: 10113 SLDCSDASFPDCFPSLYF 10166
Score = 43.7 bits (89), Expect(6) = 2e-041
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / +2
Query: 676 LHLFMQSSLDFHLRSQCFFNFL 611
LHLFMQSSL FHL SQCF + L
Sbjct: 8444 LHLFMQSSLHFHLSSQCFLDLL 8509
Score = 37.7 bits (76), Expect(7) = 1e-052
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / -2
Query: 222 MFPPGLIHHRPDAPVPGDGA 281
MFPPGLIHHRPD G A
Sbjct: 13320 MFPPGLIHHRPDGGEAGRAA 13261
Score = 37.7 bits (76), Expect(6) = 2e-041
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / +2
Query: 280 APSPGTGASGRWWIRPGGNI 221
A P + SGRWWI PGGNI
Sbjct: 13262 AARPASPPSGRWWISPGGNI 13321
Score = 37.7 bits (76), Expect(6) = 2e-041
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 484 FLKMALQVKKSKTLDAHCP*DIFGVAF 404
+LKM LQV+KS+ L HCP D F F
Sbjct: 10236 YLKMTLQVEKSEPLHTHCPQDSFRCCF 10316
Score = 29.5 bits (58), Expect(7) = 1e-052
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2 / -3
Query: 47 ESGTSSRAEARTSKKGERESGRTFSRIGSFAFGGRRRPLSVLSPS 181
+ G SR + R SKK ERE R + GG + S LS S
Sbjct: 13496 QQGRGSRQQQRRSKKQERERKRWDFSLDPPLLGGAAKVSSFLSSS 13362
>gb|AU166120.1|AU166120 AU166120 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31716, mRNA sequence
Length = 404
Score = 106 bits (227), Expect(3) = 2e-050
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3 / +1
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G A R+ GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK
Sbjct: 127 GGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 276
Score = 99.1 bits (210), Expect(3) = 1e-043
Identities = 41/51 (80%), Positives = 42/51 (82%)
Frame = -3 / -1
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVAPSP 269
+ GVAFSGPPSWATASTKRSWRSAVHR GLGSAVSTRLGPP R A P
Sbjct: 278 VLGVAFSGPPSWATASTKRSWRSAVHRRRGLGSAVSTRLGPPPAARPASPP 126
Score = 98.2 bits (208), Expect(3) = 2e-050
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASY 544
++ K ILRTMGVKGLTLFHLKSHLQKYRLGKQSGKE SEQSKDASY
Sbjct: 262 KATPKTILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEASEQSKDASY 402
Score = 82.6 bits (174), Expect(3) = 1e-043
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = -1 / -1
Query: 546 R*DASLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKIFL 415
R*DASLDCSD S PDCFP+LYF*R LFK KRV P TPIVLKI L
Sbjct: 404 R*DASLDCSDASFPDCFPSLYF*R*LFKWKRVSPFTPIVLKIVL 273
Score = 73.0 bits (153), Expect(3) = 2e-025
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2 / -3
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPA 297
F CCFLG+AELG GVDE LVEVGRPP+ GLG+ Q++A P+
Sbjct: 276 FRCCFLGAAELGDGVDEALVEVGRPPEAGLGIGGQHQAGPS 154
Score = 57.0 bits (118), Expect(3) = 2e-025
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = -3 / -3
Query: 544 IGCIFXXXXXXXXXLFP*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSG 398
IGCIF LFP S+FLKM LQV+KS+ L HCP D F F G
Sbjct: 402 IGCIFRLLRCLFSRLFPQSIFLKMTLQVEKSEPLHTHCPQDSFRCCFLG 256
Score = 37.7 bits (76), Expect(3) = 1e-043
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -1
Query: 280 APSPGTGASGRWWIRPGGNI 221
A P + SGRWWI PGGNI
Sbjct: 149 AARPASPPSGRWWISPGGNI 90
Score = 37.7 bits (76), Expect(3) = 2e-050
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 222 MFPPGLIHHRPDAPVPGDGA 281
MFPPGLIHHRPD G A
Sbjct: 91 MFPPGLIHHRPDGGEAGRAA 150
Score = 28.1 bits (55), Expect(3) = 2e-025
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2 / -3
Query: 257 VRAVVDQARREHXXXXXXXXLAPSARMERGQRGAFSFPQK 138
VR VVDQ RREH R E + F+ P K
Sbjct: 126 VRPVVDQPRREHLLLFLLPPRRQQGREEERKDETFAAPPK 7
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1381_H04
Length = 130961
Score = 95.0 bits (201), Expect(7) = 3e-050
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3 / +2
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G A R+ GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE
Sbjct: 114347 GGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 114481
Score = 90.4 bits (191), Expect(6) = 3e-039
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = -3 / -3
Query: 412 VAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVAPSP 269
++ SGPPSWATASTKRSWRSAVHR GLGSAVSTRLGPP R A P
Sbjct: 114489 ISLSGPPSWATASTKRSWRSAVHRRRGLGSAVSTRLGPPPAARPASPP 114346
Score = 53.8 bits (111), Expect(7) = 3e-050
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K ILRTMGVKGLTLFHLKSHLQ
Sbjct: 117315 EATPKTILRTMGVKGLTLFHLKSHLQ 117392
Score = 50.6 bits (104), Expect(7) = 3e-050
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2 / +1
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
+QEVKEALRAQME+QRRLHEQVE
Sbjct: 119119 NQEVKEALRAQMEMQRRLHEQVE 119187
Score = 47.8 bits (98), Expect(7) = 3e-050
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKE 607
ASYLLDAQ GMSVSPRV QD+KE
Sbjct: 118920 ASYLLDAQGGMSVSPRVSTQDVKE 118991
Score = 44.6 bits (91), Expect(7) = 3e-050
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 479 QKYRLGKQSGKEGSEQSKD 535
QKYRLGKQSGKE SEQSKD
Sbjct: 117463 QKYRLGKQSGKEASEQSKD 117519
Score = 44.6 bits (91), Expect(6) = 3e-039
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / -1
Query: 604 FHILGRNSRGHAHSTLSI*KIGC 536
F+IL RNSR H HSTL I*KIGC
Sbjct: 118988 FNILSRNSRRHTHSTLGI*KIGC 118920
Score = 43.7 bits (89), Expect(6) = 3e-039
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 534 SLDCSDPSLPDCFPNLYF 481
SLDCSD S PDCFP+LYF
Sbjct: 117518 SLDCSDASFPDCFPSLYF 117465
Score = 43.7 bits (89), Expect(6) = 3e-039
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 676 LHLFMQSSLDFHLRSQCFFNFL 611
LHLFMQSSL FHL SQCF + L
Sbjct: 119187 LHLFMQSSLHFHLSSQCFLDLL 119122
Score = 37.7 bits (76), Expect(7) = 3e-050
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 222 MFPPGLIHHRPDAPVPGDGA 281
MFPPGLIHHRPD G A
Sbjct: 114311 MFPPGLIHHRPDGGEAGRAA 114370
Score = 37.7 bits (76), Expect(6) = 3e-039
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -3
Query: 280 APSPGTGASGRWWIRPGGNI 221
A P + SGRWWI PGGNI
Sbjct: 114369 AARPASPPSGRWWISPGGNI 114310
Score = 37.7 bits (76), Expect(6) = 3e-039
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 484 FLKMALQVKKSKTLDAHCP*DIFGVAF 404
+LKM LQV+KS+ L HCP D F F
Sbjct: 117395 YLKMTLQVEKSEPLHTHCPQDSFRCCF 117315
Score = 29.5 bits (58), Expect(7) = 3e-050
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2 / +3
Query: 47 ESGTSSRAEARTSKKGERESGRTFSRIGSFAFGGRRRPLSVLSPS 181
+ G SR + R SKK ERE R + GG + S LS S
Sbjct: 114135 QQGRGSRQQQRRSKKQERERKRWDFSLDPPLLGGAAKVSSFLSSS 114269
>ref|XM_464312.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1068
Score = 109 bits (233), Expect(2) = 1e-041
Identities = 47/91 (51%), Positives = 62/91 (68%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K I+R MGVKGLTL+HLKSHLQK+RLGKQ KE SE S + ++ Q + S
Sbjct: 121 KATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFSEHSVKEAAAMEMQRNAASSSG 300
Query: 584 VPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
+ + M + V +A+R QMEVQRRLHEQ+E
Sbjct: 301 IMGRSMNHDRNVNDAIRMQMEVQRRLHEQLE 393
Score = 85.4 bits (180), Expect(2) = 1e-041
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = +3 / +1
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVLT DPKPRLRWT +LHERFVDAV QLGGP+KATPK
Sbjct: 13 GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPK 135
Score = 73.9 bits (155), Expect(3) = 1e-026
Identities = 30/42 (71%), Positives = 31/42 (73%)
Frame = -3 / -2
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPP 296
+ GVA SGPPSW TASTKRSW S VHRS GLGS V TR P
Sbjct: 137 VLGVALSGPPSWVTASTKRSWSSTVHRSRGLGSVVRTRPESP 12
Score = 51.5 bits (106), Expect(3) = 1e-026
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -1 / -2
Query: 528 DCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKIFL 415
+CS SL CFPNL F RWL + RVRP TPI L I L
Sbjct: 245 ECSLNSLCGCFPNLNFWRWLLRW*RVRPFTPITLMIVL 132
Score = 36.8 bits (74), Expect(3) = 1e-026
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 675 STCSCSLLWTSICALSASLT 616
S+CSCSLL TSIC L AS T
Sbjct: 392 SSCSCSLLCTSICILMASFT 333
>gb|CH401241.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000078
genomic scaffold, whole genome shotgun sequence
Length = 4067473
Score = 95.0 bits (201), Expect(6) = 3e-041
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3 / +2
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G A R+ GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE
Sbjct: 917951 GGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 918085
Score = 90.4 bits (191), Expect(6) = 3e-032
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = -3 / -2
Query: 412 VAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVAPSP 269
++ SGPPSWATASTKRSWRSAVHR GLGSAVSTRLGPP R A P
Sbjct: 918093 ISLSGPPSWATASTKRSWRSAVHRRRGLGSAVSTRLGPPPAARPASPP 917950
Score = 53.8 bits (111), Expect(6) = 3e-041
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K ILRTMGVKGLTLFHLKSHLQ
Sbjct: 920919 EATPKTILRTMGVKGLTLFHLKSHLQ 920996
Score = 50.6 bits (104), Expect(6) = 3e-041
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2 / +1
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
+QEVKEALRAQME+QRRLHEQVE
Sbjct: 922723 NQEVKEALRAQMEMQRRLHEQVE 922791
Score = 47.8 bits (98), Expect(6) = 3e-041
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKE 607
ASYLLDAQ GMSVSPRV QD+KE
Sbjct: 922524 ASYLLDAQGGMSVSPRVSTQDVKE 922595
Score = 44.6 bits (91), Expect(6) = 3e-032
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / -3
Query: 604 FHILGRNSRGHAHSTLSI*KIGC 536
F+IL RNSR H HSTL I*KIGC
Sbjct: 922592 FNILSRNSRRHTHSTLGI*KIGC 922524
Score = 44.6 bits (91), Expect(6) = 3e-041
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +1
Query: 479 QKYRLGKQSGKEGSEQSKD 535
QKYRLGKQSGKE SEQSKD
Sbjct: 921067 QKYRLGKQSGKEASEQSKD 921123
Score = 43.7 bits (89), Expect(6) = 3e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -3
Query: 534 SLDCSDPSLPDCFPNLYF 481
SLDCSD S PDCFP+LYF
Sbjct: 921122 SLDCSDASFPDCFPSLYF 921069
Score = 43.7 bits (89), Expect(6) = 3e-032
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 676 LHLFMQSSLDFHLRSQCFFNFL 611
LHLFMQSSL FHL SQCF + L
Sbjct: 922791 LHLFMQSSLHFHLSSQCFLDLL 922726
Score = 37.7 bits (76), Expect(6) = 3e-032
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -2
Query: 280 APSPGTGASGRWWIRPGGNI 221
A P + SGRWWI PGGNI
Sbjct: 917973 AARPASPPSGRWWISPGGNI 917914
Score = 37.7 bits (76), Expect(6) = 3e-032
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3 / -3
Query: 484 FLKMALQVKKSKTLDAHCP*DIFGVAF 404
+LKM LQV+KS+ L HCP D F F
Sbjct: 920999 YLKMTLQVEKSEPLHTHCPQDSFRCCF 920919
Score = 37.7 bits (76), Expect(6) = 3e-041
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 222 MFPPGLIHHRPDAPVPGDGA 281
MFPPGLIHHRPD G A
Sbjct: 917915 MFPPGLIHHRPDGGEAGRAA 917974
>ref|NT_107079.1| Oryza sativa (japonica cultivar-group)
Length = 5472939
Score = 95.0 bits (201), Expect(6) = 1e-040
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3 / +1
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G A R+ GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE
Sbjct: 4458328 GGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 4458462
Score = 90.4 bits (191), Expect(6) = 1e-031
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = -3 / -2
Query: 412 VAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVAPSP 269
++ SGPPSWATASTKRSWRSAVHR GLGSAVSTRLGPP R A P
Sbjct: 4458470 ISLSGPPSWATASTKRSWRSAVHRRRGLGSAVSTRLGPPPAARPASPP 4458327
Score = 53.8 bits (111), Expect(6) = 1e-040
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K ILRTMGVKGLTLFHLKSHLQ
Sbjct: 4461296 EATPKTILRTMGVKGLTLFHLKSHLQ 4461373
Score = 50.6 bits (104), Expect(6) = 1e-040
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2 / +3
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
+QEVKEALRAQME+QRRLHEQVE
Sbjct: 4463100 NQEVKEALRAQMEMQRRLHEQVE 4463168
Score = 47.8 bits (98), Expect(6) = 1e-040
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKE 607
ASYLLDAQ GMSVSPRV QD+KE
Sbjct: 4462901 ASYLLDAQGGMSVSPRVSTQDVKE 4462972
Score = 44.6 bits (91), Expect(6) = 1e-040
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 479 QKYRLGKQSGKEGSEQSKD 535
QKYRLGKQSGKE SEQSKD
Sbjct: 4461444 QKYRLGKQSGKEASEQSKD 4461500
Score = 44.6 bits (91), Expect(6) = 1e-031
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / -3
Query: 604 FHILGRNSRGHAHSTLSI*KIGC 536
F+IL RNSR H HSTL I*KIGC
Sbjct: 4462969 FNILSRNSRRHTHSTLGI*KIGC 4462901
Score = 43.7 bits (89), Expect(6) = 1e-031
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -3
Query: 534 SLDCSDPSLPDCFPNLYF 481
SLDCSD S PDCFP+LYF
Sbjct: 4461499 SLDCSDASFPDCFPSLYF 4461446
Score = 43.7 bits (89), Expect(6) = 1e-031
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 676 LHLFMQSSLDFHLRSQCFFNFL 611
LHLFMQSSL FHL SQCF + L
Sbjct: 4463168 LHLFMQSSLHFHLSSQCFLDLL 4463103
Score = 37.7 bits (76), Expect(6) = 1e-040
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 222 MFPPGLIHHRPDAPVPGDGA 281
MFPPGLIHHRPD G A
Sbjct: 4458292 MFPPGLIHHRPDGGEAGRAA 4458351
Score = 37.7 bits (76), Expect(6) = 1e-031
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -2
Query: 280 APSPGTGASGRWWIRPGGNI 221
A P + SGRWWI PGGNI
Sbjct: 4458350 AARPASPPSGRWWISPGGNI 4458291
Score = 37.7 bits (76), Expect(6) = 1e-031
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3 / -3
Query: 484 FLKMALQVKKSKTLDAHCP*DIFGVAF 404
+LKM LQV+KS+ L HCP D F F
Sbjct: 4461376 YLKMTLQVEKSEPLHTHCPQDSFRCCF 4461296
>gb|C74778.1|C74778 C74778 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E51028_1A,
mRNA sequence
Length = 390
Score = 101 bits (215), Expect(4) = 1e-040
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +3 / +2
Query: 279 ATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
A R+ GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGG EKATPK
Sbjct: 122 AGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGXEKATPK 262
Score = 93.6 bits (198), Expect(4) = 6e-034
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = -3 / -1
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVA 278
+ GVAFS PPSWATASTKRSWRSAVHR GLGSAVSTRLGPP R A
Sbjct: 264 VLGVAFSXPPSWATASTKRSWRSAVHRRRGLGSAVSTRLGPPPAARPA 121
Score = 73.0 bits (153), Expect(3) = 3e-021
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2 / -3
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPA 297
F CCFLG+AELG GVDE LVEVGRPP+ GLG+ Q++A P+
Sbjct: 262 FRCCFLGAAELGDGVDEALVEVGRPPEAGLGIGGQHQAGPS 140
Score = 64.3 bits (134), Expect(4) = 1e-040
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLG 496
++ K ILRTMGVKGLTLFHLKSHLQKYRLG
Sbjct: 248 KATPKTILRTMGVKGLTLFHLKSHLQKYRLG 340
Score = 49.2 bits (101), Expect(4) = 6e-034
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = -1 / -1
Query: 513 SLPDCFPNLYF*RWLFK*KRVRPLTPIVLKIFL 415
+L FP+LYF*R LFK KRV P TPIVLKI L
Sbjct: 357 ALSRLFPSLYF*R*LFKWKRVSPFTPIVLKIVL 259
Score = 45.5 bits (93), Expect(3) = 3e-021
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = -3 / -3
Query: 496 P*SVFLKMALQVKKSKTLDAHCP*DIFGVAFSG 398
P S+FLKM LQV+KS+ L HCP D F F G
Sbjct: 340 PXSIFLKMTLQVEKSEPLHTHCPQDSFRCCFLG 242
Score = 36.3 bits (73), Expect(4) = 6e-034
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 274 SPGTGASGRWWIRPGGNI 221
+P SGRWWI PGGNI
Sbjct: 130 TPRLAPSGRWWISPGGNI 77
Score = 36.3 bits (73), Expect(4) = 1e-040
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 222 MFPPGLIHHRPD 257
MFPPGLIHHRPD
Sbjct: 78 MFPPGLIHHRPD 113
Score = 25.4 bits (49), Expect(4) = 1e-040
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 510 RRDQSNLKMHPIF 548
+ SNLKMHPIF
Sbjct: 351 KEHXSNLKMHPIF 389
Score = 25.4 bits (49), Expect(3) = 3e-021
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 257 VRAVVDQARREH 222
VR VVDQ RREH
Sbjct: 113 VRPVVDQPRREH 78
Score = 25.4 bits (49), Expect(4) = 6e-034
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 549 RR*DASLDCSD 517
RR*DAS DCSD
Sbjct: 390 RR*DASXDCSD 358
>gb|CV728430.1|CV728430 COLD--01-G01.b1 Cold treated rice leaf lambda phage cDNA library
(COLD) Oryza sativa (japonica cultivar-group) cDNA clone
COLD--01-G01, mRNA sequence
Length = 513
Score = 105 bits (224), Expect(4) = 1e-039
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = +3 / +3
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G A R+ GGP+LVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK
Sbjct: 300 GGEAGRAAGGGPTLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 449
Score = 97.7 bits (207), Expect(5) = 1e-033
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = -3 / -3
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTRLGPPGPERVAPSP 269
+ GVAFSGPPSWATASTKRSWRSAVHR GLGSAVSTR+GPP R A P
Sbjct: 451 VLGVAFSGPPSWATASTKRSWRSAVHRRRGLGSAVSTRVGPPPAARPASPP 299
Score = 51.9 bits (107), Expect(4) = 1e-039
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
++ K ILRTMGVKGLTLFHLKSHLQ
Sbjct: 435 KATPKTILRTMGVKGLTLFHLKSHLQ 512
Score = 38.2 bits (77), Expect(5) = 1e-033
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -3 / -2
Query: 481 LKMALQVKKSKTLDAHCP*DIFGVAFSG 398
LKM LQV+KS+ L HCP D F F G
Sbjct: 512 LKMTLQVEKSEPLHTHCPQDSFRCCFLG 429
Score = 37.7 bits (76), Expect(4) = 1e-039
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 222 MFPPGLIHHRPDAPVPGDGA 281
MFPPGLIHHRPD G A
Sbjct: 264 MFPPGLIHHRPDGGEAGRAA 323
Score = 37.7 bits (76), Expect(5) = 1e-033
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -3
Query: 280 APSPGTGASGRWWIRPGGNI 221
A P + SGRWWI PGGNI
Sbjct: 322 AARPASPPSGRWWISPGGNI 263
Score = 28.6 bits (56), Expect(4) = 1e-039
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2 / +1
Query: 47 ESGTSSRAEARTSKKGERESGRTFSRIGSFAFGGRRRPLSVLSPS 181
+ G SR R SKK ERE R + GG + S LS S
Sbjct: 88 QQGRGSRQHQRRSKKQERERKRWDFSLDPPLLGGAAKVSSFLSSS 222
Score = 23.5 bits (45), Expect(5) = 1e-033
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / -3
Query: 79 SCFCPAASAAFHWQR 35
+C A+AAF WQR
Sbjct: 109 ACCLSPAAAAFQWQR 65
Score = 23.5 bits (45), Expect(5) = 1e-033
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 162 RGLLLPPKAKDPIR 121
R LLL PKA+DP++
Sbjct: 202 RPLLLLPKAEDPMK 161
>gb|D15824.1|D15824 RICC1356A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1356A, mRNA sequence
Length = 570
Score = 92.3 bits (195), Expect(2) = 2e-038
Identities = 37/47 (78%), Positives = 39/47 (82%)
Frame = +3 / +3
Query: 279 ATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
A G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+KATPK
Sbjct: 102 AAAGGGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPDKATPK 242
Score = 91.8 bits (194), Expect(2) = 2e-038
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYL 547
++ K I+RTMGVKGLTLFHLKSHLQKYRLGKQSGKE +EQSKD Y+
Sbjct: 228 KATPKTIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKEMAEQSKDVXYI 371
Score = 82.2 bits (173), Expect(3) = 6e-034
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = -1 / -3
Query: 543 *DASLDCSDPSLPDCFPNLYF*RWLFK*KRVRPLTPIVLKIFL 415
* S DCS SLPDCFPNLYF*RWLFK*KRVRP TPIVL I L
Sbjct: 367 *XTSFDCSAISLPDCFPNLYF*RWLFK*KRVRPFTPIVLMIVL 239
Score = 81.7 bits (172), Expect(3) = 6e-034
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -3 / -3
Query: 421 IFGVAFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ GVA SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 244 VLGVALSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 131
Score = 76.2 bits (160), Expect(2) = 4e-022
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -2 / -2
Query: 419 FWCCFLGSAELGHGVDETLVEVGRPPQPGLGVRRQYKARPAGAGACRPIAGNGG 258
F CCF+G AELG GVDE +VEVGRPPQ GLGV RQY+A A R GG
Sbjct: 242 FGCCFVGPAELGXGVDEAVVEVGRPPQAGLGVGRQYQAGAAPPAGRRRHRRRGG 81
Score = 52.8 bits (109), Expect(2) = 4e-022
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / -2
Query: 493 *SVFLKMALQVKKSKTLDAHCP*DIFGVAFSGP 395
*SVFLK+A QVKK +TL HCP D FG F GP
Sbjct: 317 *SVFLKVAFQVKKGETLHTHCPHDSFGCCFVGP 219
Score = 23.1 bits (44), Expect(3) = 6e-034
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3 / -1
Query: 247 WWIRPG 230
WWIRPG
Sbjct: 75 WWIRPG 58
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0410E11
Length = 150200
Score = 79.0 bits (166), Expect(5) = 2e-036
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3 / +3
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+
Sbjct: 122631 GGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPD 122744
Score = 74.4 bits (156), Expect(5) = 1e-026
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -3 / -2
Query: 409 AFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 122749 SLSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 122648
Score = 52.8 bits (109), Expect(5) = 2e-036
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K I+RTMGVKGLTLFHLKSHLQ
Sbjct: 127861 EATPKTIMRTMGVKGLTLFHLKSHLQ 127938
Score = 52.4 bits (108), Expect(5) = 2e-036
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2 / +1
Query: 599 MKESQEVKEALRAQMEVQRRLHEQVE 676
++ SQE+KEALRAQMEVQR+LHEQVE
Sbjct: 129535 LRRSQELKEALRAQMEVQRKLHEQVE 129612
Score = 44.1 bits (90), Expect(5) = 1e-026
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1 / -1
Query: 480 *RWLFK*KRVRPLTPIVLKIFLVLLS 403
*RWLFK*KRVRP TPIVL I L + S
Sbjct: 127937 *RWLFK*KRVRPFTPIVLMIVLGVAS 127860
Score = 41.8 bits (85), Expect(5) = 2e-036
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 479 QKYRLGKQSGKEGSEQSKD 535
QKYRLGKQSGKE +EQSKD
Sbjct: 128006 QKYRLGKQSGKEMAEQSKD 128062
Score = 41.8 bits (85), Expect(5) = 1e-026
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 676 LHLFMQSSLDFHLRSQCFFNFL 611
LHLFMQ SL FHL S+CFF FL
Sbjct: 129612 LHLFMQFSLHFHLCSECFF*FL 129547
Score = 41.4 bits (84), Expect(5) = 1e-026
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 534 SLDCSDPSLPDCFPNLYF 481
S DCS SLPDCFPNLYF
Sbjct: 128061 SFDCSAISLPDCFPNLYF 128008
Score = 38.6 bits (78), Expect(5) = 2e-036
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKE 607
ASY+L AQSG ++SP VP D+KE
Sbjct: 129312 ASYILGAQSGTNLSPTVPTPDLKE 129383
Score = 29.5 bits (58), Expect(5) = 1e-026
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1 / -2
Query: 606 SFISWAGTLGDTLIPL*ASRR*DASL 529
SF S GT+GD +PL*A + *+A +
Sbjct: 129382 SFKSGVGTVGDRFVPL*APKI*EAEI 129305
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0404D10
Length = 155069
Score = 79.0 bits (166), Expect(5) = 3e-036
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3 / +1
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G LVLTADPKPRLRWTADLH+RFVDAVAQLGGP+
Sbjct: 2932 GGSSAGLVLTADPKPRLRWTADLHDRFVDAVAQLGGPD 3045
Score = 74.4 bits (156), Expect(5) = 1e-026
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -3 / -1
Query: 409 AFSGPPSWATASTKRSWRSAVHRSLGLGSAVSTR 308
+ SGPPSWATASTKRSWRSAVHR GLGSAVSTR
Sbjct: 3050 SLSGPPSWATASTKRSWRSAVHRRRGLGSAVSTR 2949
Score = 52.8 bits (109), Expect(5) = 3e-036
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K I+RTMGVKGLTLFHLKSHLQ
Sbjct: 8162 EATPKTIMRTMGVKGLTLFHLKSHLQ 8239
Score = 52.4 bits (108), Expect(5) = 3e-036
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2 / +2
Query: 599 MKESQEVKEALRAQMEVQRRLHEQVE 676
++ SQE+KEALRAQMEVQR+LHEQVE
Sbjct: 9836 LRRSQELKEALRAQMEVQRKLHEQVE 9913
Score = 44.1 bits (90), Expect(5) = 1e-026
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1 / -3
Query: 480 *RWLFK*KRVRPLTPIVLKIFLVLLS 403
*RWLFK*KRVRP TPIVL I L + S
Sbjct: 8238 *RWLFK*KRVRPFTPIVLMIVLGVAS 8161
Score = 41.8 bits (85), Expect(5) = 1e-026
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 676 LHLFMQSSLDFHLRSQCFFNFL 611
LHLFMQ SL FHL S+CFF FL
Sbjct: 9913 LHLFMQFSLHFHLCSECFF*FL 9848
Score = 41.8 bits (85), Expect(5) = 3e-036
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 479 QKYRLGKQSGKEGSEQSKD 535
QKYRLGKQSGKE +EQSKD
Sbjct: 8307 QKYRLGKQSGKEMAEQSKD 8363
Score = 41.4 bits (84), Expect(5) = 1e-026
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 534 SLDCSDPSLPDCFPNLYF 481
S DCS SLPDCFPNLYF
Sbjct: 8362 SFDCSAISLPDCFPNLYF 8309
Score = 38.6 bits (78), Expect(5) = 3e-036
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKE 607
ASY+L AQSG ++SP VP D+KE
Sbjct: 9613 ASYILGAQSGTNLSPTVPTPDLKE 9684
Score = 29.5 bits (58), Expect(5) = 1e-026
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 606 SFISWAGTLGDTLIPL*ASRR*DASL 529
SF S GT+GD +PL*A + *+A +
Sbjct: 9683 SFKSGVGTVGDRFVPL*APKI*EAEI 9606
>dbj|AK119588.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-C12, full
insert sequence
Length = 1423
Score = 84.0 bits (177), Expect(3) = 4e-034
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +3 / +1
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVLT DPKPRLRWT +LH+RFVDAV QLGGP+KATPK
Sbjct: 91 GDSGLVLTTDPKPRLRWTVELHDRFVDAVTQLGGPDKATPK 213
Score = 65.2 bits (136), Expect(3) = 4e-034
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDA 538
++ K I+R MGVKGLTL+HLKSHLQK+RLGKQ KDA
Sbjct: 199 KATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQHKDFNDHSVKDA 333
Score = 38.2 bits (77), Expect(3) = 4e-034
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
S V EALR +MEVQRR HEQ+E
Sbjct: 397 SVHVNEALRMKMEVQRRFHEQLE 465
>dbj|AK059448.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A10, full
insert sequence
Length = 1504
Score = 83.5 bits (176), Expect(3) = 8e-034
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +3 / +3
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G G +G G +VL+ DPKPRLRWT DLHERFV+AV +LGGP+KATPK
Sbjct: 462 GVGVGGAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPK 611
Score = 68.9 bits (144), Expect(3) = 8e-034
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSP 580
++ K++LR MG+KGLTL+HLKSHLQKYRLGKQ+ K+ ++ ++ S S +P
Sbjct: 597 KATPKSVLRLMGMKGLTLYHLKSHLQKYRLGKQNKKDTGLEASRGAFAAHGISFASAAP 773
Score = 34.1 bits (68), Expect(3) = 8e-034
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 623 EALRAQMEVQRRLHEQVE 676
+ALR Q+EVQR+LHEQ+E
Sbjct: 825 DALRYQIEVQRKLHEQLE 878
>ref|XM_467318.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1504
Score = 83.5 bits (176), Expect(3) = 8e-034
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +3 / +3
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G G +G G +VL+ DPKPRLRWT DLHERFV+AV +LGGP+KATPK
Sbjct: 462 GVGVGGAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPK 611
Score = 68.9 bits (144), Expect(3) = 8e-034
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSP 580
++ K++LR MG+KGLTL+HLKSHLQKYRLGKQ+ K+ ++ ++ S S +P
Sbjct: 597 KATPKSVLRLMGMKGLTLYHLKSHLQKYRLGKQNKKDTGLEASRGAFAAHGISFASAAP 773
Score = 34.1 bits (68), Expect(3) = 8e-034
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 623 EALRAQMEVQRRLHEQVE 676
+ALR Q+EVQR+LHEQ+E
Sbjct: 825 DALRYQIEVQRKLHEQLE 878
>gb|CB656056.1|CB656056 OSJNEc09P11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09P11 5', mRNA sequence
Length = 823
Score = 74.4 bits (156), Expect(3) = 3e-031
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3 / +2
Query: 318 TADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
T DP PRLRWT +LH+RFVDAV QLGGP+KATPK
Sbjct: 2 TTDPNPRLRWTVELHDRFVDAVTQLGGPDKATPK 103
Score = 65.2 bits (136), Expect(3) = 3e-031
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDA 538
++ K I+R MGVKGLTL+HLKSHLQK+RLGKQ KDA
Sbjct: 89 KATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQHKDFNDHSVKDA 223
Score = 38.2 bits (77), Expect(3) = 3e-031
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
S V EALR +MEVQRR HEQ+E
Sbjct: 287 SVHVNEALRMKMEVQRRFHEQLE 355
>gb|CA998296.1|CA998296 S345B_C01 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 517
Score = 76.2 bits (160), Expect(3) = 6e-029
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVL+ D KPRL+WT +LHERFV+AV QLGGPEKATPK
Sbjct: 71 GESGLVLSTDAKPRLKWTPELHERFVEAVNQLGGPEKATPK 193
Score = 56.1 bits (116), Expect(3) = 6e-029
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K I+R MGV GLTL+HLKSHLQKYRL K
Sbjct: 179 KATPKTIMRLMGVPGLTLYHLKSHLQKYRLSK 274
Score = 37.7 bits (76), Expect(3) = 6e-029
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 560 SGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
+G VS +S + EAL+ Q+EVQRRLHEQ+E
Sbjct: 356 NGSPVSHLNLGTQTNKSVHIGEALQMQIEVQRRLHEQLE 472
>dbj|AK100282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074M06, full
insert sequence
Length = 1617
Score = 76.2 bits (160), Expect(3) = 5e-028
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVL+ D KPRL+WT +LHERFV+AV QLGGPEKATPK
Sbjct: 281 GESGLVLSTDAKPRLKWTPELHERFVEAVNQLGGPEKATPK 403
Score = 52.8 bits (109), Expect(3) = 5e-028
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K I+R MGV GLTL HLKSHLQKYRL K
Sbjct: 389 KATPKTIMRLMGVPGLTL*HLKSHLQKYRLSK 484
Score = 37.7 bits (76), Expect(3) = 5e-028
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 560 SGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
+G VS +S + EAL+ Q+EVQRRLHEQ+E
Sbjct: 566 NGSPVSHLNLGTQTNKSVHIGEALQMQIEVQRRLHEQLE 682
>dbj|AK069306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H08, full
insert sequence
Length = 1823
Score = 66.1 bits (138), Expect(3) = 8e-027
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT+DLH RFVDA+AQLGGP++ATPK
Sbjct: 458 KQRLRWTSDLHNRFVDAIAQLGGPDRATPK 547
Score = 56.5 bits (117), Expect(3) = 8e-027
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
K +L MGV G+T++H+KSHLQKYRL K + +E SKD
Sbjct: 545 KGVLTVMGVPGITIYHVKSHLQKYRLAKYIPESPAEGSKD 664
Score = 40.0 bits (81), Expect(3) = 8e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 701 DSAPGMQINEALKMQMEVQKRLHEQLE 781
>dbj|AK061987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B07, full
insert sequence
Length = 1535
Score = 66.1 bits (138), Expect(3) = 8e-027
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT+DLH RFVDA+AQLGGP++ATPK
Sbjct: 527 KQRLRWTSDLHNRFVDAIAQLGGPDRATPK 616
Score = 56.5 bits (117), Expect(3) = 8e-027
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
K +L MGV G+T++H+KSHLQKYRL K + +E SKD
Sbjct: 614 KGVLTVMGVPGITIYHVKSHLQKYRLAKYIPESPAEGSKD 733
Score = 40.0 bits (81), Expect(3) = 8e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 770 DSAPGMQINEALKMQMEVQKRLHEQLE 850
>dbj|AK067645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112H14, full
insert sequence
Length = 1521
Score = 74.4 bits (156), Expect(3) = 8e-027
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3 / +1
Query: 309 LVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
LVL+ D KPRL+WT++LHERFV+AV QLGGP+KATPK
Sbjct: 340 LVLSTDAKPRLKWTSELHERFVEAVNQLGGPDKATPK 450
Score = 55.6 bits (115), Expect(3) = 8e-027
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K I+R MG+ GLTL+HLKSHLQKYRL K
Sbjct: 436 KATPKTIMRLMGIPGLTLYHLKSHLQKYRLSK 531
Score = 38.6 bits (78), Expect(3) = 8e-027
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
S + EAL+ Q+EVQRRLHEQ+E
Sbjct: 664 SMHINEALQMQIEVQRRLHEQLE 732
>ref|XM_479582.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1521
Score = 74.4 bits (156), Expect(3) = 8e-027
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3 / +1
Query: 309 LVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
LVL+ D KPRL+WT++LHERFV+AV QLGGP+KATPK
Sbjct: 340 LVLSTDAKPRLKWTSELHERFVEAVNQLGGPDKATPK 450
Score = 55.6 bits (115), Expect(3) = 8e-027
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K I+R MG+ GLTL+HLKSHLQKYRL K
Sbjct: 436 KATPKTIMRLMGIPGLTLYHLKSHLQKYRLSK 531
Score = 38.6 bits (78), Expect(3) = 8e-027
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
S + EAL+ Q+EVQRRLHEQ+E
Sbjct: 664 SMHINEALQMQIEVQRRLHEQLE 732
>ref|XM_475467.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 774
Score = 66.1 bits (138), Expect(3) = 9e-027
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT+DLH RFVDA+AQLGGP++ATPK
Sbjct: 133 KQRLRWTSDLHNRFVDAIAQLGGPDRATPK 222
Score = 56.5 bits (117), Expect(3) = 9e-027
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
K +L MGV G+T++H+KSHLQKYRL K + +E SKD
Sbjct: 220 KGVLTVMGVPGITIYHVKSHLQKYRLAKYIPESPAEGSKD 339
Score = 40.0 bits (81), Expect(3) = 9e-027
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 376 DSAPGMQINEALKMQMEVQKRLHEQLE 456
>dbj|AK106400.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-G05, full
insert sequence
Length = 1656
Score = 78.5 bits (165), Expect(2) = 2e-026
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3 / +2
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G G + DPKPRLRWT DLHERFVDAV +LGGP+KATPK
Sbjct: 242 GVGSAAAAAARDPKPRLRWTPDLHERFVDAVTRLGGPDKATPK 370
Score = 65.2 bits (136), Expect(2) = 2e-026
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGK 511
++ K++LR MG+KGLTL+HLKSHLQKYRLG+QS K
Sbjct: 356 KATPKSVLRLMGMKGLTLYHLKSHLQKYRLGRQSKK 463
>ref|XM_473755.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 750
Score = 78.5 bits (165), Expect(2) = 2e-026
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3 / +1
Query: 291 GPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G G + DPKPRLRWT DLHERFVDAV +LGGP+KATPK
Sbjct: 22 GVGSAAAAAARDPKPRLRWTPDLHERFVDAVTRLGGPDKATPK 150
Score = 65.2 bits (136), Expect(2) = 2e-026
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGK 511
++ K++LR MG+KGLTL+HLKSHLQKYRLG+QS K
Sbjct: 136 KATPKSVLRLMGMKGLTLYHLKSHLQKYRLGRQSKK 243
>gb|CB665543.1|CB665543 OSJNEd12A13.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12A13 5', mRNA sequence
Length = 839
Score = 66.1 bits (138), Expect(3) = 2e-026
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT+DLH RFVDA+AQLGGP++ATPK
Sbjct: 168 KQRLRWTSDLHNRFVDAIAQLGGPDRATPK 257
Score = 56.5 bits (117), Expect(3) = 2e-026
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
K +L MGV G+T++H+KSHLQKYRL K + +E SKD
Sbjct: 255 KGVLTVMGVPGITIYHVKSHLQKYRLAKYIPESPAEGSKD 374
Score = 38.6 bits (78), Expect(3) = 2e-026
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +2 / +1
Query: 614 EVKEALRAQMEVQRRLHEQVE 676
++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 427 QINEALKMQMEVQKRLHEQLE 489
>gb|CF325238.1|CF325238 JMT1--02-L04.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--02-L04, mRNA sequence
Length = 603
Score = 66.1 bits (138), Expect(3) = 4e-026
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT+DLH RFVDA+AQLGGP++ATPK
Sbjct: 283 KQRLRWTSDLHNRFVDAIAQLGGPDRATPK 372
Score = 56.5 bits (117), Expect(3) = 4e-026
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
K +L MGV G+T++H+KSHLQKYRL K + +E SKD
Sbjct: 370 KGVLTVMGVPGITIYHVKSHLQKYRLAKYIPESPAEGSKD 489
Score = 37.7 bits (76), Expect(3) = 4e-026
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQV 673
D ++ EAL+ QMEVQ+RLHEQ+
Sbjct: 526 DSAPGMQINEALKMQMEVQKRLHEQL 603
>dbj|AK071731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114F03, full
insert sequence
Length = 1423
Score = 65.2 bits (136), Expect(3) = 5e-026
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +3 / +3
Query: 288 SGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
S GG S + RLRWT DLH+RFVDAV QLGGP++ATPK
Sbjct: 258 SNSGGNSSNSNFAARQRLRWTDDLHDRFVDAVTQLGGPDRATPK 389
Score = 55.1 bits (114), Expect(3) = 5e-026
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2 / +3
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGK 499
K ILR MGV+GLT++H+KSHLQKYRL K
Sbjct: 387 KGILRIMGVQGLTIYHVKSHLQKYRLAK 470
Score = 39.6 bits (80), Expect(3) = 5e-026
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
+ E+ EAL+ QMEVQ+RLHEQ+E
Sbjct: 543 ESSSGMEIGEALKLQMEVQKRLHEQLE 623
>gb|AU065238.1|AU065238 AU065238 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60871_1A, mRNA sequence
Length = 712
Score = 65.2 bits (136), Expect(3) = 5e-026
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +3 / +1
Query: 288 SGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
S GG S + RLRWT DLH+RFVDAV QLGGP++ATPK
Sbjct: 253 SNSGGNSSNSNFAARQRLRWTDDLHDRFVDAVTQLGGPDRATPK 384
Score = 55.1 bits (114), Expect(3) = 5e-026
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGK 499
K ILR MGV+GLT++H+KSHLQKYRL K
Sbjct: 382 KGILRIMGVQGLTIYHVKSHLQKYRLAK 465
Score = 39.6 bits (80), Expect(3) = 5e-026
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
+ E+ EAL+ QMEVQ+RLHEQ+E
Sbjct: 538 ESSSGMEIGEALKLQMEVQKRLHEQLE 618
>gb|CB649467.1|CB649467 OSJNEb13G15.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13G15 5', mRNA sequence
Length = 842
Score = 76.2 bits (160), Expect(3) = 7e-026
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
G LVL+ D KPRL+WT +LHERFV+AV QLGGPEKATPK
Sbjct: 269 GESGLVLSTDAKPRLKWTPELHERFVEAVNQLGGPEKATPK 391
Score = 45.5 bits (93), Expect(3) = 7e-026
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEG 517
++ K I+R MGV GLTL+HLKSHLQ + +S + G
Sbjct: 377 KATPKTIMRLMGVPGLTLYHLKSHLQTKQKSPRSSQCG 490
Score = 37.7 bits (76), Expect(3) = 7e-026
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2 / +3
Query: 560 SGMSVSPRVPAQDMKESQEVKEALRAQMEVQRRLHEQVE 676
+G VS +S + EAL+ Q+EVQRRLHEQ+E
Sbjct: 546 NGSPVSHLNLGTQTNKSVHIGEALQMQIEVQRRLHEQLE 662
>dbj|AK065704.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037C19, full
insert sequence
Length = 1858
Score = 64.3 bits (134), Expect(3) = 5e-025
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
KPRLRWT +LHERFVDAV +L GPEKATPK
Sbjct: 995 KPRLRWTPELHERFVDAVNKLEGPEKATPK 1084
Score = 51.5 bits (106), Expect(3) = 5e-025
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K +L+ M V+GLT++H+KSHLQKYRL K + ++ ++ +G + +
Sbjct: 1070 KATPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKK 1249
Query: 584 VPAQ 595
AQ
Sbjct: 1250 KSAQ 1261
Score = 40.9 bits (83), Expect(3) = 5e-025
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +2 / +2
Query: 602 KESQEVKEALRAQMEVQRRLHEQVE 676
K+S ++ EALR QMEVQ++LHEQ+E
Sbjct: 1247 KKSAQMAEALRMQMEVQKQLHEQLE 1321
>ref|XM_464081.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1858
Score = 64.3 bits (134), Expect(3) = 5e-025
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
KPRLRWT +LHERFVDAV +L GPEKATPK
Sbjct: 995 KPRLRWTPELHERFVDAVNKLEGPEKATPK 1084
Score = 51.5 bits (106), Expect(3) = 5e-025
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2 / +2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKDASYLLDAQSGMSVSPR 583
++ K +L+ M V+GLT++H+KSHLQKYRL K + ++ ++ +G + +
Sbjct: 1070 KATPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKK 1249
Query: 584 VPAQ 595
AQ
Sbjct: 1250 KSAQ 1261
Score = 40.9 bits (83), Expect(3) = 5e-025
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +2 / +2
Query: 602 KESQEVKEALRAQMEVQRRLHEQVE 676
K+S ++ EALR QMEVQ++LHEQ+E
Sbjct: 1247 KKSAQMAEALRMQMEVQKQLHEQLE 1321
>ref|XM_481816.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 924
Score = 59.3 bits (123), Expect(3) = 9e-025
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
+ RLRWT +LH+RFV+AV QLGGP++ATPK
Sbjct: 133 RQRLRWTNELHDRFVEAVTQLGGPDRATPK 222
Score = 57.4 bits (119), Expect(3) = 9e-025
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSKD 535
K +LR MGV GLT++H+KSHLQKYRL K ++ +KD
Sbjct: 220 KGVLRIMGVPGLTIYHVKSHLQKYRLAKYIPDPSADDNKD 339
Score = 39.1 bits (79), Expect(3) = 9e-025
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2 / +1
Query: 590 AQDMKESQEVKEALRAQMEVQRRLHEQVE 676
A + ++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 370 ALEGSSGMQISEALKLQMEVQKRLHEQLE 456
>dbj|AK103241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123H06, full
insert sequence
Length = 1603
Score = 60.6 bits (126), Expect(3) = 2e-024
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
+ RLRWT +LHERFV+AV QLGGP++ATPK
Sbjct: 380 RQRLRWTNELHERFVEAVTQLGGPDRATPK 469
Score = 55.1 bits (114), Expect(3) = 2e-024
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2 / +2
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K ++ +K
Sbjct: 467 KGVLRIMGVQGLTIYHVKSHLQKYRLAKYIPDSSADGNK 583
Score = 38.6 bits (78), Expect(3) = 2e-024
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +2 / +2
Query: 614 EVKEALRAQMEVQRRLHEQVE 676
++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 641 QISEALKLQMEVQKRLHEQLE 703
>gb|CB656351.1|CB656351 OSJNEc10J17.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10J17 5', mRNA sequence
Length = 802
Score = 60.6 bits (126), Expect(3) = 2e-024
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +3 / +2
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
+ RLRWT +LHERFV+AV QLGGP++ATPK
Sbjct: 353 RQRLRWTNELHERFVEAVTQLGGPDRATPK 442
Score = 55.1 bits (114), Expect(3) = 2e-024
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2 / +2
Query: 416 KNILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEGSEQSK 532
K +LR MGV+GLT++H+KSHLQKYRL K ++ +K
Sbjct: 440 KGVLRIMGVQGLTIYHVKSHLQKYRLAKYIPDSSADGNK 556
Score = 38.6 bits (78), Expect(3) = 2e-024
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +2 / +2
Query: 614 EVKEALRAQMEVQRRLHEQVE 676
++ EAL+ QMEVQ+RLHEQ+E
Sbjct: 614 QISEALKLQMEVQKRLHEQLE 676
>dbj|AK101951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I07, full
insert sequence
Length = 1959
Score = 62.0 bits (129), Expect(3) = 1e-023
Identities = 28/47 (59%), Positives = 30/47 (63%)
Frame = +3 / +1
Query: 279 ATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
AT P G A K R+RWT DLHERFVD V QLGG +KATPK
Sbjct: 925 ATPVTPTGNLAGSGAPSKTRIRWTQDLHERFVDCVNQLGGADKATPK 1065
Score = 47.3 bits (97), Expect(3) = 1e-023
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K IL+ M GLT++H+KSHLQKYR+ K
Sbjct: 1051 KATPKGILKLMNSDGLTIYHIKSHLQKYRIAK 1146
Score = 42.3 bits (86), Expect(3) = 1e-023
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D K ++ EALR Q++VQRRLHEQ+E
Sbjct: 1216 DPKTGMQITEALRVQLDVQRRLHEQLE 1296
>ref|XM_474250.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1260
Score = 62.0 bits (129), Expect(3) = 1e-023
Identities = 28/47 (59%), Positives = 30/47 (63%)
Frame = +3 / +1
Query: 279 ATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPK 419
AT P G A K R+RWT DLHERFVD V QLGG +KATPK
Sbjct: 655 ATPVTPTGNLAGSGAPSKTRIRWTQDLHERFVDCVNQLGGADKATPK 795
Score = 47.3 bits (97), Expect(3) = 1e-023
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K IL+ M GLT++H+KSHLQKYR+ K
Sbjct: 781 KATPKGILKLMNSDGLTIYHIKSHLQKYRIAK 876
Score = 42.3 bits (86), Expect(3) = 1e-023
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D K ++ EALR Q++VQRRLHEQ+E
Sbjct: 946 DPKTGMQITEALRVQLDVQRRLHEQLE 1026
>gb|AACV01005235.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005235, whole
genome shotgun sequence
Length = 4319
Score = 71.6 bits (150), Expect(4) = 2e-023
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +3 / -3
Query: 270 GDGATRSGPGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G G +G G +VL+ DPKPRLRWT DLHERFV+AV +LGGP+
Sbjct: 3951 GVGVGGAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPD 3817
Score = 48.3 bits (99), Expect(4) = 2e-023
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2 / -2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K++LR MG+KGLTL+HLKSHLQ
Sbjct: 3373 EATPKSVLRLMGMKGLTLYHLKSHLQ 3296
Score = 34.1 bits (68), Expect(4) = 2e-023
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / -1
Query: 623 EALRAQMEVQRRLHEQVE 676
+ALR Q+EVQR+LHEQ+E
Sbjct: 2150 DALRYQIEVQRKLHEQLE 2097
Score = 26.3 bits (51), Expect(4) = 2e-023
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -3
Query: 461 HLKSHLQKYRLGKQSGKE 514
HL QKYRLGKQ+ K+
Sbjct: 3204 HLFIDPQKYRLGKQNKKD 3151
>gb|AACV01018197.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018197, whole
genome shotgun sequence
Length = 18992
Score = 52.8 bits (109), Expect(4) = 4e-023
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K I+RTMGVKGLTLFHLKSHLQ
Sbjct: 1558 EATPKTIMRTMGVKGLTLFHLKSHLQ 1635
Score = 52.4 bits (108), Expect(4) = 4e-023
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2 / +1
Query: 599 MKESQEVKEALRAQMEVQRRLHEQVE 676
++ SQE+KEALRAQMEVQR+LHEQVE
Sbjct: 3232 LRRSQELKEALRAQMEVQRKLHEQVE 3309
Score = 41.8 bits (85), Expect(4) = 4e-023
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2 / +2
Query: 479 QKYRLGKQSGKEGSEQSKD 535
QKYRLGKQSGKE +EQSKD
Sbjct: 1703 QKYRLGKQSGKEMAEQSKD 1759
Score = 38.6 bits (78), Expect(4) = 4e-023
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 536 ASYLLDAQSGMSVSPRVPAQDMKE 607
ASY+L AQSG ++SP VP D+KE
Sbjct: 3009 ASYILGAQSGTNLSPTVPTPDLKE 3080
>dbj|AK067950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127L15, full
insert sequence
Length = 1839
Score = 59.3 bits (123), Expect(3) = 5e-023
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFV+AV +L GPEKATPK
Sbjct: 1080 KARLRWTLELHERFVEAVNKLDGPEKATPK 1169
Score = 50.1 bits (103), Expect(3) = 5e-023
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K +L+ M V+GLT++H+KSHLQKYRL K
Sbjct: 1155 KATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 1250
Score = 40.5 bits (82), Expect(3) = 5e-023
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +2 / +3
Query: 602 KESQEVKEALRAQMEVQRRLHEQVE 676
K++ +V EALR QMEVQ++LHEQ+E
Sbjct: 1338 KKNLQVAEALRMQMEVQKQLHEQLE 1412
>dbj|AK060648.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G12, full
insert sequence
Length = 1764
Score = 59.3 bits (123), Expect(3) = 5e-023
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K RLRWT +LHERFV+AV +L GPEKATPK
Sbjct: 1005 KARLRWTLELHERFVEAVNKLDGPEKATPK 1094
Score = 50.1 bits (103), Expect(3) = 5e-023
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K +L+ M V+GLT++H+KSHLQKYRL K
Sbjct: 1080 KATPKGVLKLMKVEGLTIYHVKSHLQKYRLAK 1175
Score = 40.5 bits (82), Expect(3) = 5e-023
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +2 / +3
Query: 602 KESQEVKEALRAQMEVQRRLHEQVE 676
K++ +V EALR QMEVQ++LHEQ+E
Sbjct: 1263 KKNLQVAEALRMQMEVQKQLHEQLE 1337
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0073A21
Length = 170051
Score = 73.5 bits (154), Expect(4) = 8e-023
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3 / -2
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G LVLT DPKPRLRWT +LHERFVDAV QLGGP+
Sbjct: 106882 GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPD 106775
Score = 49.2 bits (101), Expect(4) = 8e-023
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2 / -2
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K I+R MGVKGLTL+HLKSHLQ
Sbjct: 106672 EATPKTIMRVMGVKGLTLYHLKSHLQ 106595
Score = 40.9 bits (83), Expect(4) = 8e-023
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2 / -2
Query: 608 SQEVKEALRAQMEVQRRLHEQVE 676
S+ V +A+R QMEVQRRLHEQ+E
Sbjct: 106012 SRNVNDAIRMQMEVQRRLHEQLE 105944
Score = 30.4 bits (60), Expect(4) = 8e-023
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 473 HLQKYRLGKQSGKEGSEQS 529
H QK+RLGKQ KE SE S
Sbjct: 106452 HEQKFRLGKQPHKEFSEHS 106396
>gb|AACV01014747.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014747, whole
genome shotgun sequence
Length = 14667
Score = 72.1 bits (151), Expect(3) = 3e-022
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 297 GGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPE 404
G LVLT DPKPRLRWT +LH+RFVDAV QLGGP+
Sbjct: 3171 GDSGLVLTTDPKPRLRWTVELHDRFVDAVTQLGGPD 3278
Score = 49.2 bits (101), Expect(3) = 3e-022
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQ 481
E+ K I+R MGVKGLTL+HLKSHLQ
Sbjct: 3451 EATPKTIMRVMGVKGLTLYHLKSHLQ 3528
Score = 38.6 bits (78), Expect(3) = 3e-022
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2 / +1
Query: 599 MKESQEVKEALRAQMEVQRRLHEQVE 676
+ S V EALR +MEVQRR HEQ+E
Sbjct: 4255 VSRSVHVNEALRMKMEVQRRFHEQLE 4332
>dbj|AK063486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-C05, full
insert sequence
Length = 2003
Score = 53.8 bits (111), Expect(3) = 1e-021
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3 / +1
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K R+RWT +LHE FV AV +LGG EKATPK
Sbjct: 997 KQRMRWTPELHESFVHAVNKLGGSEKATPK 1086
Score = 46.0 bits (94), Expect(3) = 1e-021
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / +1
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D+K S ++ EALR QMEVQ+RLHEQ+E
Sbjct: 1231 DLKASMDLTEALRLQMEVQKRLHEQLE 1311
Score = 45.5 bits (93), Expect(3) = 1e-021
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K +L+ M V GLT++H+KSHLQKYR +
Sbjct: 1072 KATPKGVLKLMKVDGLTIYHVKSHLQKYRTAR 1167
>dbj|AK109510.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D09, full
insert sequence
Length = 1750
Score = 53.8 bits (111), Expect(3) = 1e-021
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3 / +3
Query: 330 KPRLRWTADLHERFVDAVAQLGGPEKATPK 419
K R+RWT +LHE FV AV +LGG EKATPK
Sbjct: 975 KQRMRWTPELHESFVHAVNKLGGSEKATPK 1064
Score = 46.0 bits (94), Expect(3) = 1e-021
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2 / +3
Query: 596 DMKESQEVKEALRAQMEVQRRLHEQVE 676
D+K S ++ EALR QMEVQ+RLHEQ+E
Sbjct: 1209 DLKASMDLTEALRLQMEVQKRLHEQLE 1289
Score = 45.5 bits (93), Expect(3) = 1e-021
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2 / +3
Query: 404 ESNTKNILRTMGVKGLTLFHLKSHLQKYRLGK 499
++ K +L+ M V GLT++H+KSHLQKYR +
Sbjct: 1050 KATPKGVLKLMKVDGLTIYHVKSHLQKYRTAR 1145
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,387,105,362
Number of Sequences: 438736
Number of extensions: 82393947
Number of successful extensions: 606983
Number of sequences better than 1.0e-020: 56
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 221344391380
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)