TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5351892.2.1
(466 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP004817.3| Oryza sativa (japonica cultivar-group) geno... 155 2e-037
dbj|AP005002.3| Oryza sativa (japonica cultivar-group) geno... 155 2e-037
gb|AACV01005463.1| Oryza sativa (japonica cultivar-group) c... 155 2e-037
ref|XM_467941.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-037
gb|CB661027.1|CB661027 OSJNEd03F22.r OSJNEd Oryza sativa (j... 155 2e-037
dbj|AK100977.1| Oryza sativa (japonica cultivar-group) cDNA... 155 5e-037
gb|CB636249.1|CB636249 OSJNEa01H23.r OSJNEa Oryza sativa (j... 155 2e-036
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 155 2e-036
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 155 2e-036
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 155 2e-036
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 155 2e-036
gb|AU092062.1|AU092062 AU092062 Rice callus Oryza sativa (j... 150 1e-034
gb|AQ796429.1|AQ796429 nbxb0066A05r CUGI Rice BAC Library O... 136 1e-030
dbj|AK101014.1| Oryza sativa (japonica cultivar-group) cDNA... 136 1e-030
gb|AACV01005465.1| Oryza sativa (japonica cultivar-group) c... 136 1e-030
ref|XM_467945.1| Oryza sativa (japonica cultivar-group), mRNA 134 6e-030
dbj|AK071124.1| Oryza sativa (japonica cultivar-group) cDNA... 127 1e-027
dbj|AP004687.2| Oryza sativa (japonica cultivar-group) geno... 127 1e-027
dbj|AP003458.4| Oryza sativa (japonica cultivar-group) geno... 127 1e-027
gb|AACV01013292.1| Oryza sativa (japonica cultivar-group) c... 127 1e-027
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 127 1e-027
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 127 1e-027
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 127 1e-027
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 127 1e-027
gb|AACV01005464.1| Oryza sativa (japonica cultivar-group) c... 104 3e-022
dbj|AK102499.1| Oryza sativa (japonica cultivar-group) cDNA... 104 3e-022
ref|XM_467944.1| Oryza sativa (japonica cultivar-group), mRNA 104 3e-022
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0539D10
Length = 158691
Score = 155 bits (334), Expect(2) = 2e-037
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 49530 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 49709
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 49710 SWGLKVVNQT 49739
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +2
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 61601 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 61780
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 61781 SWGLKLVDQSEW*M*CPL 61834
Score = 127 bits (271), Expect(2) = 3e-029
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -3
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 49747 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 49568
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 49567 FSDLNMIHGVRP 49532
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -2
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 49781 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 49602
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 49601 GAAARRVRHGVVLRPEHDPRRQAG 49530
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +2
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 49532 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 49711
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 49712 LGPEGCKSNSVV 49747
Score = 104 bits (222), Expect(2) = 3e-022
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +2
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 56153 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 56308
Score = 24.9 bits (48), Expect(2) = 3e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -2
Query: 388 CLSTIYTWIKY 356
C S IY WIKY
Sbjct: 49868 CSSVIYIWIKY 49836
Score = 23.5 bits (45), Expect(2) = 3e-022
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 12 GLKPWIMLKSEN 47
GL+PW+M K N
Sbjct: 56105 GLRPWVMYKPVN 56140
Score = 23.5 bits (45), Expect(2) = 2e-037
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1 / +2
Query: 304 ILLLRNKGTIQNVFFPSCI*SKCR*L 381
I L KG + + + + I*SKCR*L
Sbjct: 49784 IFFLCPKGLHRFILYSTYI*SKCR*L 49861
>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0486G03
Length = 146713
Score = 155 bits (334), Expect(2) = 2e-037
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 142173 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 142352
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 142353 SWGLKVVNQT 142382
Score = 127 bits (271), Expect(2) = 3e-029
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -1
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 142390 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 142211
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 142210 FSDLNMIHGVRP 142175
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -3
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 142424 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 142245
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 142244 GAAARRVRHGVVLRPEHDPRRQAG 142173
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +2
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 142175 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 142354
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 142355 LGPEGCKSNSVV 142390
Score = 24.9 bits (48), Expect(2) = 3e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -3
Query: 388 CLSTIYTWIKY 356
C S IY WIKY
Sbjct: 142511 CSSVIYIWIKY 142479
Score = 23.5 bits (45), Expect(2) = 2e-037
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1 / +2
Query: 304 ILLLRNKGTIQNVFFPSCI*SKCR*L 381
I L KG + + + + I*SKCR*L
Sbjct: 142427 IFFLCPKGLHRFILYSTYI*SKCR*L 142504
>gb|AACV01005463.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005463, whole
genome shotgun sequence
Length = 12222
Score = 155 bits (334), Expect(2) = 2e-037
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / -2
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 1385 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 1206
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 1205 SWGLKVVNQT 1176
Score = 127 bits (271), Expect(2) = 3e-029
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / +1
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 1168 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 1347
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 1348 FSDLNMIHGVRP 1383
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / +3
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 1134 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 1313
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 1314 GAAARRVRHGVVLRPEHDPRRQAG 1385
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / -1
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 1383 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 1204
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 1203 LGPEGCKSNSVV 1168
Score = 24.9 bits (48), Expect(2) = 3e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / +3
Query: 388 CLSTIYTWIKY 356
C S IY WIKY
Sbjct: 1047 CSSVIYIWIKY 1079
Score = 23.5 bits (45), Expect(2) = 2e-037
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1 / -1
Query: 304 ILLLRNKGTIQNVFFPSCI*SKCR*L 381
I L KG + + + + I*SKCR*L
Sbjct: 1131 IFFLCPKGLHRFILYSTYI*SKCR*L 1054
>ref|XM_467941.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1852
Score = 155 bits (334), Expect(2) = 2e-037
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 1486 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 1665
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 1666 SWGLKVVNQT 1695
Score = 127 bits (271), Expect(2) = 3e-029
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -3
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 1703 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 1524
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 1523 FSDLNMIHGVRP 1488
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -2
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 1737 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 1558
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 1557 GAAARRVRHGVVLRPEHDPRRQAG 1486
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +3
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 1488 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 1667
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 1668 LGPEGCKSNSVV 1703
Score = 24.9 bits (48), Expect(2) = 3e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -2
Query: 388 CLSTIYTWIKY 356
C S IY WIKY
Sbjct: 1824 CSSVIYIWIKY 1792
Score = 23.5 bits (45), Expect(2) = 2e-037
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1 / +3
Query: 304 ILLLRNKGTIQNVFFPSCI*SKCR*L 381
I L KG + + + + I*SKCR*L
Sbjct: 1740 IFFLCPKGLHRFILYSTYI*SKCR*L 1817
>gb|CB661027.1|CB661027 OSJNEd03F22.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd03F22 3', mRNA sequence
Length = 859
Score = 155 bits (334), Expect(2) = 2e-037
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / -2
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 384 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 205
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 204 SWGLKVVNQT 175
Score = 127 bits (271), Expect(2) = 3e-029
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / +2
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 167 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 346
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 347 FSDLNMIHGVRP 382
Score = 114 bits (244), Expect(2) = 3e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / +1
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 133 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 312
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 313 GAAARRVRHGVVLRPEHDPRRQAG 384
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / -1
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 382 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 203
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 202 LGPEGCKSNSVV 167
Score = 24.9 bits (48), Expect(2) = 3e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / +1
Query: 388 CLSTIYTWIKY 356
C S IY WIKY
Sbjct: 46 CSSVIYIWIKY 78
Score = 23.5 bits (45), Expect(2) = 2e-037
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1 / -1
Query: 304 ILLLRNKGTIQNVFFPSCI*SKCR*L 381
I L KG + + + + I*SKCR*L
Sbjct: 130 IFFLCPKGLHRFILYSTYI*SKCR*L 53
Score = 21.7 bits (41), Expect(2) = 3e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / +3
Query: 389 LSINYLHLDQI 357
L +YLHLDQI
Sbjct: 45 LFFSYLHLDQI 77
>dbj|AK100977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143L21, full
insert sequence
Length = 1853
Score = 155 bits (334), Expect(2) = 5e-037
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 1486 SGLTPWIMFRSENHAMPDPPCHRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 1665
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 1666 SWGLKVVNQT 1695
Score = 126 bits (270), Expect(2) = 4e-029
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -1
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 1703 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARWHGGSGMAW 1524
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 1523 FSDLNMIHGVRP 1488
Score = 114 bits (243), Expect = 7e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -3
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 1737 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 1558
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 1557 GAVARRVRHGVVLRPEHDPRRQAG 1486
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +3
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 1488 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 1667
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 1668 LGPEGCKSNSVV 1703
Score = 24.9 bits (48), Expect(2) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -2
Query: 388 CLSTIYTWIKY 356
C S IY WIKY
Sbjct: 1825 CSSVIYIWIKY 1793
Score = 22.1 bits (42), Expect(2) = 5e-037
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 322 KGTIQNVFFPSCI*SKCR*L 381
KG + + + + I*SKCR*L
Sbjct: 1759 KGLHRFILYSTYI*SKCR*L 1818
>gb|CB636249.1|CB636249 OSJNEa01H23.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01H23 3', mRNA sequence
Length = 715
Score = 155 bits (334), Expect = 2e-036
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / -2
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 375 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 196
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 195 SWGLKVVNQT 166
Score = 127 bits (271), Expect(2) = 4e-030
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / +2
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 158 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 337
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 338 FSDLNMIHGVRP 373
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / +1
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 124 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 303
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 304 GAAARRVRHGVVLRPEHDPRRQAG 375
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / -1
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 373 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 194
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 193 LGPEGCKSNSVV 158
Score = 27.6 bits (54), Expect(2) = 4e-030
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3 / +1
Query: 389 LSINYLHLDQIQEGKNTFCMVPL 321
L +YLHLDQI K C+V L
Sbjct: 37 LFFSYLHLDQIMWSKE*ICVVLL 105
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 155 bits (334), Expect = 2e-036
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +2
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 7370516 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 7370695
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 7370696 SWGLKVVNQT 7370725
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 7382587 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 7382766
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 7382767 SWGLKLVDQSEW*M*CPL 7382820
Score = 127 bits (271), Expect(2) = 2e-029
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -3
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 7370733 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 7370554
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 7370553 FSDLNMIHGVRP 7370518
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -2
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 7370767 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 7370588
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 7370587 GAAARRVRHGVVLRPEHDPRRQAG 7370516
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +1
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 7370518 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 7370697
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 7370698 LGPEGCKSNSVV 7370733
Score = 104 bits (222), Expect = 6e-021
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +1
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 7377139 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 7377294
Score = 24.9 bits (48), Expect(2) = 2e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -2
Query: 388 CLSTIYTWIKY 356
C S IY WIKY
Sbjct: 7370854 CSSVIYIWIKY 7370822
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 155 bits (334), Expect = 2e-036
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 18801861 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 18802040
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 18802041 SWGLKVVNQT 18802070
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +2
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 18814385 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 18814564
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 18814565 SWGLKLVDQSEW*M*CPL 18814618
Score = 127 bits (271), Expect = 1e-027
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -1
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 18802078 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 18801899
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 18801898 FSDLNMIHGVRP 18801863
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -3
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 18802112 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 18801933
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 18801932 GAAARRVRHGVVLRPEHDPRRQAG 18801861
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +2
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 18801863 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 18802042
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 18802043 LGPEGCKSNSVV 18802078
Score = 104 bits (222), Expect = 6e-021
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +3
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 18808878 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 18809033
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 155 bits (334), Expect = 2e-036
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +2
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 32254925 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 32255104
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 32255105 SWGLKVVNQT 32255134
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 32267449 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 32267628
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 32267629 SWGLKLVDQSEW*M*CPL 32267682
Score = 127 bits (271), Expect = 1e-027
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -1
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 32255142 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 32254963
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 32254962 FSDLNMIHGVRP 32254927
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -3
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 32255176 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 32254997
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 32254996 GAAARRVRHGVVLRPEHDPRRQAG 32254925
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +1
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 32254927 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 32255106
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 32255107 LGPEGCKSNSVV 32255142
Score = 104 bits (222), Expect = 6e-021
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +2
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 32261942 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 32262097
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 155 bits (334), Expect = 2e-036
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 32205517 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 32205696
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 32205697 SWGLKVVNQT 32205726
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 32217588 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 32217767
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 32217768 SWGLKLVDQSEW*M*CPL 32217821
Score = 127 bits (271), Expect = 1e-027
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = -1 / -3
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLTSSQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 32205734 YH*V*FTTFRPQLTSSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 32205555
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG RP
Sbjct: 32205554 FSDLNMIHGVRP 32205519
Score = 114 bits (244), Expect = 5e-024
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = -3 / -2
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P VLAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 32205768 SLVNEQTTNLQLPLSLIYNLQAPTDVLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 32205589
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR QAG
Sbjct: 32205588 GAAARRVRHGVVLRPEHDPRRQAG 32205517
Score = 113 bits (241), Expect = 1e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +2 / +3
Query: 11 RPEAVDHA*VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGRE 190
RP+AVDH VGEPR A P V PRHV RAVLPS SLLRLQGEE GQ A+REALRGR+
Sbjct: 32205519 RPDAVDHVQVGEPRHAGPAVPPRHVDRAVLPSGSLLRLQGEEER*PGQDGAVREALRGRQ 32205698
Query: 191 LGAQDCRSNSFV 226
LG + C+SNS V
Sbjct: 32205699 LGPEGCKSNSVV 32205734
Score = 104 bits (222), Expect = 6e-021
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +3
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 32212140 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 32212295
>gb|AU092062.1|AU092062 AU092062 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10371, mRNA sequence
Length = 496
Score = 150 bits (322), Expect(2) = 1e-034
Identities = 53/70 (75%), Positives = 62/70 (88%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+G PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCE V
Sbjct: 121 SGXTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEXV 300
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 301 SWGLKVVNQT 330
Score = 122 bits (261), Expect(2) = 3e-026
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = -1 / -3
Query: 226 YK*V*STILSPQLTSSQCLT*GTTLPKSVSFLALQS*KGA*WKHGSMDMARTHGGSGVTW 47
Y *V* T PQLT SQCLT GT LP+S ALQS*KGA*WKHGS+DMAR HGGSG+ W
Sbjct: 338 YH*V*FTTFRPQLTXSQCLTNGTILPRSAFLFALQS*KGA*WKHGSIDMARRHGGSGMAW 159
Query: 46 FSDLSMIHGFRP 11
FSDL+MIHG P
Sbjct: 158 FSDLNMIHGVXP 123
Score = 109 bits (233), Expect(2) = 2e-022
Identities = 52/84 (61%), Positives = 58/84 (69%)
Frame = -3 / -2
Query: 260 SAVSPDQITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
S V+ L +SLIYNL+ P LAVPH RH+LAQ+ V RLAVVEGSLMEARLD H
Sbjct: 372 SLVNEQTTNLQLPLSLIYNLQAPTDXLAVPHERHHLAQVSVPLRLAVVEGSLMEARLDRH 193
Query: 80 GADARWVWRHVVLRLKHDPRLQAG 9
GA AR V VVLR +HDPR AG
Sbjct: 192 GAAARRVRHGVVLRPEHDPRRXAG 121
Score = 18.9 bits (35), Expect(2) = 1e-034
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / +3
Query: 304 ILLLRNKGTIQNVFFPSCI*SKC 372
I L KG + + + + I*SKC
Sbjct: 375 IFFLCPKGLHRFILYSTYI*SKC 443
Score = 18.9 bits (35), Expect(2) = 3e-026
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1 / -2
Query: 385 LSTIYTWIKY 356
L + Y WIKY
Sbjct: 456 LYSTYIWIKY 427
Score = 18.5 bits (34), Expect(2) = 2e-022
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 386 SINYLHLDQI 357
S+ ++HLDQI
Sbjct: 457 SLLHIHLDQI 428
>gb|AQ796429.1|AQ796429 nbxb0066A05r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0066A05r, DNA sequence
Length = 301
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 57 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 236
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 237 SWGLKLVDQSEW*M*CPL 290
>dbj|AK101014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149B20, full
insert sequence
Length = 1877
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 1486 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 1665
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 1666 SWGLKLVDQSEW*M*CPL 1719
>gb|AACV01005465.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005465, whole
genome shotgun sequence
Length = 10504
Score = 136 bits (292), Expect = 1e-030
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 2401 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 2580
Query: 189 SWGLKIVDQTHL*CSCNL 242
SWGLK+VDQ+ * C L
Sbjct: 2581 SWGLKLVDQSEW*M*CPL 2634
>ref|XM_467945.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1719
Score = 134 bits (287), Expect = 6e-030
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = +3 / +1
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 1501 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 1680
Query: 189 SWGLKIVDQT 218
SWGLK+VDQ+
Sbjct: 1681 SWGLKLVDQS 1710
>dbj|AK071124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080C23, full
insert sequence
Length = 1805
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / +2
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 1454 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 1633
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 1634 WGLKLV 1651
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0021C04
Length = 162115
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / +2
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 136667 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 136846
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 136847 WGLKLV 136864
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0701E03
Length = 183245
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / +1
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 60049 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 60228
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 60229 WGLKLV 60246
>gb|AACV01013292.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013292, whole
genome shotgun sequence
Length = 11757
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / -3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 8317 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 8138
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 8137 WGLKLV 8120
>ref|NT_079873.2| Oryza sativa (japonica cultivar-group)
Length = 5116111
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 1436100 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 1436279
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 1436280 WGLKLV 1436297
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 5663121 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 5663300
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 5663301 WGLKLV 5663318
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 5663121 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 5663300
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 5663301 WGLKLV 5663318
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 127 bits (271), Expect = 1e-027
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3 / +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 5744520 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 5744699
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 5744700 WGLKLV 5744717
>gb|AACV01005464.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005464, whole
genome shotgun sequence
Length = 8589
Score = 104 bits (222), Expect(2) = 3e-022
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +3
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 5583 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 5738
Score = 23.5 bits (45), Expect(2) = 3e-022
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 12 GLKPWIMLKSEN 47
GL+PW+M K N
Sbjct: 5535 GLRPWVMYKPVN 5570
>dbj|AK102499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095B15, full
insert sequence
Length = 2043
Score = 104 bits (222), Expect(2) = 3e-022
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +3
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 1710 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 1865
Score = 23.5 bits (45), Expect(2) = 3e-022
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 12 GLKPWIMLKSEN 47
GL+PW+M K N
Sbjct: 1662 GLRPWVMYKPVN 1697
>ref|XM_467944.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2043
Score = 104 bits (222), Expect(2) = 3e-022
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +3 / +3
Query: 57 PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVSWGLKIVD 212
PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DVSWGLK+VD
Sbjct: 1710 PDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDVSWGLKLVD 1865
Score = 23.5 bits (45), Expect(2) = 3e-022
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 12 GLKPWIMLKSEN 47
GL+PW+M K N
Sbjct: 1662 GLRPWVMYKPVN 1697
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,943,768,934
Number of Sequences: 438736
Number of extensions: 38931693
Number of successful extensions: 226477
Number of sequences better than 1.0e-020: 35
length of database: 933,473,305
effective HSP length: 57
effective length of database: 908,465,353
effective search space used: 88121139241
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)