TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4573985.2.1
(373 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB670710.1|CB670710 OSJNEe03O24.f OSJNEe Oryza sativa (j... 232 2e-059
gb|CF304455.1|CF304455 ABF1--05-A09.g1 ABF3-overexpressing ... 232 2e-059
dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA... 232 2e-059
dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA... 232 2e-059
ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA 232 2e-059
gb|CB639455.1|CB639455 OSJNEa10L04.f OSJNEa Oryza sativa (j... 225 4e-057
gb|AACV01007878.1| Oryza sativa (japonica cultivar-group) c... 145 2e-054
gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 ... 145 1e-053
gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC O... 145 1e-053
gb|CA997884.1|CA997884 S234C1_A12 Rice cold stress germinat... 203 5e-053
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 145 3e-052
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 145 7e-052
dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA... 193 1e-047
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 122 1e-043
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 122 1e-043
gb|AC137547.2| Oryza sativa (japonica cultivar-group) chrom... 122 1e-043
gb|AACV01006539.1| Oryza sativa (japonica cultivar-group) c... 122 1e-043
gb|AU181006.1|AU181006 AU181006 Rice cDNA from leaf Oryza s... 157 6e-037
gb|AQ794524.1|AQ794524 nbxb0053M11r CUGI Rice BAC Library O... 122 1e-035
gb|AU065486.1|AU065486 AU065486 Rice callus Oryza sativa (j... 149 3e-034
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 145 3e-033
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 145 3e-033
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 145 3e-033
ref|XM_473037.1| Oryza sativa (japonica cultivar-group), p... 81 1e-030
gb|AACV01010055.1| Oryza sativa (japonica cultivar-group) c... 77 1e-027
emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromoso... 77 7e-027
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 77 1e-025
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 77 5e-025
>gb|CB670710.1|CB670710 OSJNEe03O24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03O24 5', mRNA sequence
Length = 798
Score = 232 bits (502), Expect = 2e-059
Identities = 92/113 (81%), Positives = 98/113 (86%)
Frame = -3 / +1
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCW 183
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVGVGDTSKG +QPNDHYCW
Sbjct: 202 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCW 381
Query: 182 MRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
MRPEDIDY RPVTECHSCSD SIVFKDSKTYSDKLV+GAKAL
Sbjct: 382 MRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKAL 540
Score = 160 bits (344), Expect = 6e-038
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = +3 / -1
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 519 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 340
Query: 225 VTYTHLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
VTYTHL D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 339 VTYTHLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 211
Score = 150 bits (323), Expect = 5e-035
Identities = 71/115 (61%), Positives = 80/115 (69%)
Frame = -2 / +3
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSGGCR*HL*RQQSA**PLL 187
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+GGCR*HL R **PLL
Sbjct: 198 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTGGCR*HLKRWCPT**PLL 377
Query: 186 LDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQNLLRQARQGRQGPV 22
LDE RG+RL + H NGCCP CSFHSVQGQQ+LL QAR R+GPV
Sbjct: 378 LDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQDLL*QARAWRKGPV 542
Score = 148 bits (318), Expect = 2e-034
Identities = 74/115 (64%), Positives = 76/115 (66%)
Frame = +1 / -2
Query: 13 PGQDRALAPXXXXXXXXXXXXNTMEXXXXXXXXXXXXXEQE*HSVTGLL*SMSSGLIQQ* 192
P RA AP NTME EQE HSVTGL *S+SSGLIQQ*
Sbjct: 551 PNLYRAFAPRTSLSE*VLLSLNTMEAAARAAAISEARSEQEWHSVTGLG*SISSGLIQQ* 372
Query: 193 WSLG*LLPLEVSPTPT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
WSLG P EVSPTPT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 371 WSLGWAPPFEVSPTPTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 207
Score = 142 bits (304), Expect = 2e-032
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +2 / -3
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 517 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 338
Query: 227 HLHPPERQSCLSCQQMN*RF*GCSLFPT*SAP*YGRAHRWPRTSAAT 367
HLHPP R+S + MN*R *G +L PT*SAP*+GRAHR P T T
Sbjct: 337 HLHPPVRRSDR*YRLMN*RS*GGNLCPT*SAP*HGRAHRSPHTWPCT 197
>gb|CF304455.1|CF304455 ABF1--05-A09.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--05-A09, mRNA sequence
Length = 637
Score = 232 bits (502), Expect = 2e-059
Identities = 92/113 (81%), Positives = 98/113 (86%)
Frame = -3 / +3
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCW 183
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVGVGDTSKG +QPNDHYCW
Sbjct: 69 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCW 248
Query: 182 MRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
MRPEDIDY RPVTECHSCSD SIVFKDSKTYSDKLV+GAKAL
Sbjct: 249 MRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKAL 407
Score = 160 bits (344), Expect = 6e-038
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = +3 / -3
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 386 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 207
Query: 225 VTYTHLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
VTYTHL D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 206 VTYTHLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 78
Score = 150 bits (323), Expect = 5e-035
Identities = 71/115 (61%), Positives = 80/115 (69%)
Frame = -2 / +2
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSGGCR*HL*RQQSA**PLL 187
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+GGCR*HL R **PLL
Sbjct: 65 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTGGCR*HLKRWCPT**PLL 244
Query: 186 LDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQNLLRQARQGRQGPV 22
LDE RG+RL + H NGCCP CSFHSVQGQQ+LL QAR R+GPV
Sbjct: 245 LDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQDLL*QARAWRKGPV 409
Score = 148 bits (318), Expect = 2e-034
Identities = 74/115 (64%), Positives = 76/115 (66%)
Frame = +1 / -1
Query: 13 PGQDRALAPXXXXXXXXXXXXNTMEXXXXXXXXXXXXXEQE*HSVTGLL*SMSSGLIQQ* 192
P RA AP NTME EQE HSVTGL *S+SSGLIQQ*
Sbjct: 418 PNLYRAFAPRTSLSE*VLLSLNTMEAAARAAAISEARSEQEWHSVTGLG*SISSGLIQQ* 239
Query: 193 WSLG*LLPLEVSPTPT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
WSLG P EVSPTPT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 238 WSLGWAPPFEVSPTPTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 74
Score = 142 bits (304), Expect = 2e-032
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +2 / -2
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 384 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 205
Query: 227 HLHPPERQSCLSCQQMN*RF*GCSLFPT*SAP*YGRAHRWPRTSAAT 367
HLHPP R+S + MN*R *G +L PT*SAP*+GRAHR P T T
Sbjct: 204 HLHPPVRRSDR*YRLMN*RS*GGNLCPT*SAP*HGRAHRSPHTWPCT 64
>dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054M04, full
insert sequence
Length = 2397
Score = 232 bits (502), Expect = 2e-059
Identities = 92/113 (81%), Positives = 98/113 (86%)
Frame = -3 / +2
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCW 183
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVGVGDTSKG +QPNDHYCW
Sbjct: 770 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCW 949
Query: 182 MRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
MRPEDIDY RPVTECHSCSD SIVFKDSKTYSDKLV+GAKAL
Sbjct: 950 MRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKAL 1108
Score = 160 bits (344), Expect = 6e-038
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = +3 / -3
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 1087 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 908
Query: 225 VTYTHLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
VTYTHL D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 907 VTYTHLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 779
Score = 150 bits (323), Expect = 5e-035
Identities = 71/115 (61%), Positives = 80/115 (69%)
Frame = -2 / +1
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSGGCR*HL*RQQSA**PLL 187
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+GGCR*HL R **PLL
Sbjct: 766 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTGGCR*HLKRWCPT**PLL 945
Query: 186 LDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQNLLRQARQGRQGPV 22
LDE RG+RL + H NGCCP CSFHSVQGQQ+LL QAR R+GPV
Sbjct: 946 LDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQDLL*QARAWRKGPV 1110
Score = 148 bits (318), Expect = 2e-034
Identities = 74/115 (64%), Positives = 76/115 (66%)
Frame = +1 / -1
Query: 13 PGQDRALAPXXXXXXXXXXXXNTMEXXXXXXXXXXXXXEQE*HSVTGLL*SMSSGLIQQ* 192
P RA AP NTME EQE HSVTGL *S+SSGLIQQ*
Sbjct: 1119 PNLYRAFAPRTSLSE*VLLSLNTMEAAARAAAISEARSEQEWHSVTGLG*SISSGLIQQ* 940
Query: 193 WSLG*LLPLEVSPTPT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
WSLG P EVSPTPT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 939 WSLGWAPPFEVSPTPTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 775
Score = 142 bits (304), Expect = 2e-032
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +2 / -2
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 1085 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 906
Query: 227 HLHPPERQSCLSCQQMN*RF*GCSLFPT*SAP*YGRAHRWPRTSAAT 367
HLHPP R+S + MN*R *G +L PT*SAP*+GRAHR P T T
Sbjct: 905 HLHPPVRRSDR*YRLMN*RS*GGNLCPT*SAP*HGRAHRSPHTWPCT 765
>dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D09, full
insert sequence
Length = 1963
Score = 232 bits (502), Expect = 2e-059
Identities = 92/113 (81%), Positives = 98/113 (86%)
Frame = -3 / +3
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCW 183
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVGVGDTSKG +QPNDHYCW
Sbjct: 345 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCW 524
Query: 182 MRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
MRPEDIDY RPVTECHSCSD SIVFKDSKTYSDKLV+GAKAL
Sbjct: 525 MRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKAL 683
Score = 160 bits (344), Expect = 6e-038
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = +3 / -3
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 662 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 483
Query: 225 VTYTHLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
VTYTHL D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 482 VTYTHLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 354
Score = 150 bits (323), Expect = 5e-035
Identities = 71/115 (61%), Positives = 80/115 (69%)
Frame = -2 / +2
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSGGCR*HL*RQQSA**PLL 187
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+GGCR*HL R **PLL
Sbjct: 341 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTGGCR*HLKRWCPT**PLL 520
Query: 186 LDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQNLLRQARQGRQGPV 22
LDE RG+RL + H NGCCP CSFHSVQGQQ+LL QAR R+GPV
Sbjct: 521 LDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQDLL*QARAWRKGPV 685
Score = 148 bits (318), Expect = 2e-034
Identities = 74/115 (64%), Positives = 76/115 (66%)
Frame = +1 / -1
Query: 13 PGQDRALAPXXXXXXXXXXXXNTMEXXXXXXXXXXXXXEQE*HSVTGLL*SMSSGLIQQ* 192
P RA AP NTME EQE HSVTGL *S+SSGLIQQ*
Sbjct: 694 PNLYRAFAPRTSLSE*VLLSLNTMEAAARAAAISEARSEQEWHSVTGLG*SISSGLIQQ* 515
Query: 193 WSLG*LLPLEVSPTPT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
WSLG P EVSPTPT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 514 WSLGWAPPFEVSPTPTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 350
Score = 142 bits (304), Expect = 2e-032
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +2 / -2
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 660 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 481
Query: 227 HLHPPERQSCLSCQQMN*RF*GCSLFPT*SAP*YGRAHRWPRTSAAT 367
HLHPP R+S + MN*R *G +L PT*SAP*+GRAHR P T T
Sbjct: 480 HLHPPVRRSDR*YRLMN*RS*GGNLCPT*SAP*HGRAHRSPHTWPCT 340
>ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2313
Score = 232 bits (502), Expect = 2e-059
Identities = 92/113 (81%), Positives = 98/113 (86%)
Frame = -3 / +3
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCW 183
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVGVGDTSKG +QPNDHYCW
Sbjct: 669 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCW 848
Query: 182 MRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
MRPEDIDY RPVTECHSCSD SIVFKDSKTYSDKLV+GAKAL
Sbjct: 849 MRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKAL 1007
Score = 160 bits (344), Expect = 6e-038
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = +3 / -2
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 986 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 807
Query: 225 VTYTHLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
VTYTHL D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 806 VTYTHLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 678
Score = 150 bits (323), Expect = 5e-035
Identities = 71/115 (61%), Positives = 80/115 (69%)
Frame = -2 / +2
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSGGCR*HL*RQQSA**PLL 187
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+GGCR*HL R **PLL
Sbjct: 665 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTGGCR*HLKRWCPT**PLL 844
Query: 186 LDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQNLLRQARQGRQGPV 22
LDE RG+RL + H NGCCP CSFHSVQGQQ+LL QAR R+GPV
Sbjct: 845 LDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQDLL*QARAWRKGPV 1009
Score = 148 bits (318), Expect = 2e-034
Identities = 74/115 (64%), Positives = 76/115 (66%)
Frame = +1 / -3
Query: 13 PGQDRALAPXXXXXXXXXXXXNTMEXXXXXXXXXXXXXEQE*HSVTGLL*SMSSGLIQQ* 192
P RA AP NTME EQE HSVTGL *S+SSGLIQQ*
Sbjct: 1018 PNLYRAFAPRTSLSE*VLLSLNTMEAAARAAAISEARSEQEWHSVTGLG*SISSGLIQQ* 839
Query: 193 WSLG*LLPLEVSPTPT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
WSLG P EVSPTPT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 838 WSLGWAPPFEVSPTPTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 674
Score = 142 bits (304), Expect = 2e-032
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +2 / -1
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 984 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 805
Query: 227 HLHPPERQSCLSCQQMN*RF*GCSLFPT*SAP*YGRAHRWPRTSAAT 367
HLHPP R+S + MN*R *G +L PT*SAP*+GRAHR P T T
Sbjct: 804 HLHPPVRRSDR*YRLMN*RS*GGNLCPT*SAP*HGRAHRSPHTWPCT 664
>gb|CB639455.1|CB639455 OSJNEa10L04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa10L04 5', mRNA sequence
Length = 560
Score = 225 bits (485), Expect = 4e-057
Identities = 88/109 (80%), Positives = 94/109 (86%)
Frame = -3 / +2
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCW 183
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVGVGDTSKG +QPNDHYCW
Sbjct: 233 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCW 412
Query: 182 MRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKG 36
MRPEDIDY RPVTECHSCSD SIVFKDSKTYSDKLV+G
Sbjct: 413 MRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRG 559
Score = 160 bits (344), Expect = 6e-038
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = +3 / -2
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 550 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 371
Query: 225 VTYTHLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
VTYTHL D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 370 VTYTHLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 242
Score = 143 bits (307), Expect = 7e-033
Identities = 69/94 (73%), Positives = 71/94 (75%)
Frame = +1 / -3
Query: 76 NTMEXXXXXXXXXXXXXEQE*HSVTGLL*SMSSGLIQQ*WSLG*LLPLEVSPTPT*ATIL 255
NTME EQE HSVTGL *S+SSGLIQQ*WSLG P EVSPTPT ATI
Sbjct: 519 NTMEAAARAAAISEARSEQEWHSVTGLG*SISSGLIQQ*WSLGWAPPFEVSPTPTCATIR 340
Query: 256 SIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 339 SIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 238
Score = 142 bits (304), Expect = 2e-032
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +2 / -1
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 548 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 369
Query: 227 HLHPPERQSCLSCQQMN*RF*GCSLFPT*SAP*YGRAHRWPRTSAAT 367
HLHPP R+S + MN*R *G +L PT*SAP*+GRAHR P T T
Sbjct: 368 HLHPPVRRSDR*YRLMN*RS*GGNLCPT*SAP*HGRAHRSPHTWPCT 228
Score = 141 bits (303), Expect = 3e-032
Identities = 67/108 (62%), Positives = 75/108 (69%)
Frame = -2 / +1
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSGGCR*HL*RQQSA**PLL 187
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+GGCR*HL R **PLL
Sbjct: 229 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTGGCR*HLKRWCPT**PLL 408
Query: 186 LDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQNLLRQAR 43
LDE RG+RL + H NGCCP CSFHSVQGQQ+LL QAR
Sbjct: 409 LDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQDLL*QAR 552
>gb|AACV01007878.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007878, whole
genome shotgun sequence
Length = 25339
Score = 145 bits (311), Expect(2) = 2e-054
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / -3
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 6347 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 6168
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 6167 TYSDKLVRGAKAL 6129
Score = 105 bits (223), Expect(2) = 5e-037
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / +3
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 6150 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 6329
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 6330 VTYTHL 6347
Score = 102 bits (218), Expect(2) = 8e-032
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2 / +2
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 6152 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 6331
Query: 227 HLHPPERQS 253
HLHPP +S
Sbjct: 6332 HLHPPAIRS 6358
Score = 99.1 bits (210), Expect(2) = 3e-029
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = -2 / -2
Query: 243 SGGCR*HL*RQQSA**PLLLDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQ 64
+GGCR*HL R **PLLLDE RG+RL + H NGCCP CSFHSVQGQQ
Sbjct: 6348 AGGCR*HLKRWCPT**PLLLDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQ 6169
Query: 63 NLLRQARQGRQGPV 22
+LL QAR R+GPV
Sbjct: 6168 DLL*QARAWRKGPV 6127
Score = 97.3 bits (206), Expect(2) = 2e-054
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = -3 / -3
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVG 234
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVG
Sbjct: 6611 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVG 6483
Score = 78.0 bits (164), Expect(2) = 5e-037
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 235 PT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
PT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 6484 PTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 6606
Score = 62.9 bits (131), Expect(2) = 8e-032
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3 / +3
Query: 234 THLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
T+L D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 6483 TNLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 6602
Score = 57.9 bits (120), Expect(2) = 3e-029
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSG 238
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+G
Sbjct: 6615 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTG 6487
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
sequence
Length = 139946
Score = 145 bits (311), Expect(2) = 1e-053
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / -3
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 57249 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 57070
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 57069 TYSDKLVRGAKAL 57031
Score = 105 bits (223), Expect(2) = 3e-036
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / +1
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 57052 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 57231
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 57232 VTYTHL 57249
Score = 102 bits (218), Expect(2) = 4e-031
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2 / +3
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 57054 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 57233
Query: 227 HLHPPERQS 253
HLHPP +S
Sbjct: 57234 HLHPPAIRS 57260
Score = 99.1 bits (210), Expect(2) = 2e-028
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = -2 / -2
Query: 243 SGGCR*HL*RQQSA**PLLLDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQ 64
+GGCR*HL R **PLLLDE RG+RL + H NGCCP CSFHSVQGQQ
Sbjct: 57250 AGGCR*HLKRWCPT**PLLLDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQ 57071
Query: 63 NLLRQARQGRQGPV 22
+LL QAR R+GPV
Sbjct: 57070 DLL*QARAWRKGPV 57029
Score = 97.3 bits (206), Expect(2) = 1e-053
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = -3 / -3
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVG 234
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVG
Sbjct: 57513 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVG 57385
Score = 78.0 bits (164), Expect(2) = 3e-036
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 235 PT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
PT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 57386 PTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 57508
Score = 62.9 bits (131), Expect(2) = 4e-031
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3 / +1
Query: 234 THLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
T+L D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 57385 TNLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 57504
Score = 57.9 bits (120), Expect(2) = 2e-028
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSG 238
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+G
Sbjct: 57517 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTG 57389
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
sequence
Length = 159661
Score = 145 bits (311), Expect(2) = 1e-053
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / +3
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 119298 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 119477
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 119478 TYSDKLVRGAKAL 119516
Score = 105 bits (223), Expect(2) = 3e-036
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / -3
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 119495 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 119316
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 119315 VTYTHL 119298
Score = 102 bits (218), Expect(2) = 5e-031
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2 / -2
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 119493 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 119314
Query: 227 HLHPPERQS 253
HLHPP +S
Sbjct: 119313 HLHPPAIRS 119287
Score = 99.1 bits (210), Expect(2) = 2e-028
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = -2 / +2
Query: 243 SGGCR*HL*RQQSA**PLLLDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQ 64
+GGCR*HL R **PLLLDE RG+RL + H NGCCP CSFHSVQGQQ
Sbjct: 119297 AGGCR*HLKRWCPT**PLLLDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQ 119476
Query: 63 NLLRQARQGRQGPV 22
+LL QAR R+GPV
Sbjct: 119477 DLL*QARAWRKGPV 119518
Score = 97.3 bits (206), Expect(2) = 1e-053
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = -3 / +3
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVG 234
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVG
Sbjct: 119034 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVG 119162
Score = 78.0 bits (164), Expect(2) = 3e-036
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +1 / -1
Query: 235 PT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
PT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 119161 PTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 119039
Score = 62.9 bits (131), Expect(2) = 5e-031
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3 / -3
Query: 234 THLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
T+L D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 119162 TNLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 119043
Score = 57.9 bits (120), Expect(2) = 2e-028
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = -2 / +2
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSG 238
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+G
Sbjct: 119030 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTG 119158
>gb|CA997884.1|CA997884 S234C1_A12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 533
Score = 203 bits (437), Expect(2) = 5e-053
Identities = 81/98 (82%), Positives = 84/98 (85%)
Frame = -3 / +1
Query: 317 LIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTEC 138
LIKWGTDY+LKTFNSSADTIDRIVAQVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTEC
Sbjct: 160 LIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTEC 339
Query: 137 HSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
HSCSD SIVFKDSKTYSDKLV+GAKAL
Sbjct: 340 HSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKAL 453
Score = 142 bits (304), Expect(2) = 7e-035
Identities = 61/93 (65%), Positives = 71/93 (76%)
Frame = +3 / -3
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 432 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 253
Query: 225 VTYTHLSDNPVYRVSR*IEGFEDVVCSPLDQLL 323
VTYTHL D+P+ + *IEG E+V+C+PLDQLL
Sbjct: 252 VTYTHLCDDPIDSIG**IEGLEEVICAPLDQLL 154
Score = 132 bits (282), Expect = 2e-029
Identities = 61/99 (61%), Positives = 69/99 (69%)
Frame = -2 / +3
Query: 318 ADQVGNRLHPQNLQFIC*HDRQDCRSGGCR*HL*RQQSA**PLLLDETRGHRLQKASHXX 139
ADQVG+RL PQ+LQFI + R D R+GGCR*HL R **PLLLDE RG+RL + H
Sbjct: 159 ADQVGHRLPPQDLQFISRYYRSDRRTGGCR*HLKRWCPT**PLLLDEARGYRLPQTCH*V 338
Query: 138 XXXXXXXX*NGCCPGCSFHSVQGQQNLLRQARQGRQGPV 22
NGCCP CSFHSVQGQQ+LL QAR R+GPV
Sbjct: 339 PLLLRSCFRNGCCPCCSFHSVQGQQDLL*QARAWRKGPV 455
Score = 122 bits (261), Expect(2) = 2e-027
Identities = 63/102 (61%), Positives = 64/102 (62%)
Frame = +1 / -1
Query: 13 PGQDRALAPXXXXXXXXXXXXNTMEXXXXXXXXXXXXXEQE*HSVTGLL*SMSSGLIQQ* 192
P RA AP NTME EQE HSVTGL *S+SSGLIQQ*
Sbjct: 464 PNLYRAFAPRTSLSE*VLLSLNTMEAAARAAAISEARSEQEWHSVTGLG*SISSGLIQQ* 285
Query: 193 WSLG*LLPLEVSPTPT*ATILSIVSADELKVLRM*SVPHLIS 318
WSLG P EVSPTPT ATI SIVSADELKVLR *SVPHLIS
Sbjct: 284 WSLGWAPPFEVSPTPTCATIRSIVSADELKVLRR*SVPHLIS 159
Score = 120 bits (256), Expect(2) = 7e-026
Identities = 57/91 (62%), Positives = 67/91 (73%)
Frame = +2 / -2
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 430 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 251
Query: 227 HLHPPERQSCLSCQQMN*RF*GCSLFPT*SA 319
HLHPP R+S + MN*R *G +L PT*SA
Sbjct: 250 HLHPPVRRSDR*YRLMN*RS*GGNLCPT*SA 158
Score = 28.1 bits (55), Expect(2) = 5e-053
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3 / +2
Query: 362 RPRYEAIGELDHI 324
+ +YEAIGELDH+
Sbjct: 116 KAKYEAIGELDHV 154
Score = 27.2 bits (53), Expect(2) = 7e-035
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 322 LIWSSSPMASYL 357
L WSSSP+ASYL
Sbjct: 156 LTWSSSPIASYL 121
Score = 21.7 bits (41), Expect(2) = 2e-027
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / -1
Query: 323 *YGRAHRWPRTSAAT 367
*+GRAHR P T T
Sbjct: 155 *HGRAHRSPHTWPCT 111
Score = 18.9 bits (35), Expect(2) = 7e-026
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 324 DMVELTDGLV 353
+MVELTD L+
Sbjct: 154 NMVELTDRLI 125
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 145 bits (311), Expect(2) = 3e-052
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / -1
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 3197811 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 3197632
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 3197631 TYSDKLVRGAKAL 3197593
Score = 105 bits (223), Expect(2) = 7e-035
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / +1
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 3197614 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 3197793
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 3197794 VTYTHL 3197811
Score = 102 bits (218), Expect(2) = 1e-029
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2 / +3
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 3197616 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 3197795
Query: 227 HLHPPERQS 253
HLHPP +S
Sbjct: 3197796 HLHPPAIRS 3197822
Score = 99.1 bits (210), Expect(2) = 4e-027
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = -2 / -3
Query: 243 SGGCR*HL*RQQSA**PLLLDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQ 64
+GGCR*HL R **PLLLDE RG+RL + H NGCCP CSFHSVQGQQ
Sbjct: 3197812 AGGCR*HLKRWCPT**PLLLDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQ 3197633
Query: 63 NLLRQARQGRQGPV 22
+LL QAR R+GPV
Sbjct: 3197632 DLL*QARAWRKGPV 3197591
Score = 97.3 bits (206), Expect(2) = 3e-052
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = -3 / -1
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVG 234
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVG
Sbjct: 3198075 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVG 3197947
Score = 78.0 bits (164), Expect(2) = 7e-035
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 235 PT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
PT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 3197948 PTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 3198070
Score = 62.9 bits (131), Expect(2) = 1e-029
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3 / +1
Query: 234 THLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
T+L D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 3197947 TNLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 3198066
Score = 57.9 bits (120), Expect(2) = 4e-027
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSG 238
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+G
Sbjct: 3198079 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTG 3197951
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 145 bits (311), Expect(2) = 7e-052
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / -1
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 3585312 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 3585133
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 3585132 TYSDKLVRGAKAL 3585094
Score = 105 bits (223), Expect(2) = 2e-034
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / +1
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 3585115 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 3585294
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 3585295 VTYTHL 3585312
Score = 102 bits (218), Expect(2) = 3e-029
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2 / +3
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 3585117 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 3585296
Query: 227 HLHPPERQS 253
HLHPP +S
Sbjct: 3585297 HLHPPAIRS 3585323
Score = 99.1 bits (210), Expect(2) = 1e-026
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = -2 / -3
Query: 243 SGGCR*HL*RQQSA**PLLLDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHSVQGQQ 64
+GGCR*HL R **PLLLDE RG+RL + H NGCCP CSFHSVQGQQ
Sbjct: 3585313 AGGCR*HLKRWCPT**PLLLDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHSVQGQQ 3585134
Query: 63 NLLRQARQGRQGPV 22
+LL QAR R+GPV
Sbjct: 3585133 DLL*QARAWRKGPV 3585092
Score = 97.3 bits (206), Expect(2) = 7e-052
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = -3 / -1
Query: 362 RPRYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVG 234
+ +YEAIGELDH+KELIKWGTDY+LKTFNSSADTIDRIVAQVG
Sbjct: 3585576 KAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVG 3585448
Score = 78.0 bits (164), Expect(2) = 2e-034
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 235 PT*ATILSIVSADELKVLRM*SVPHLISSLIWSSSPMASYL 357
PT ATI SIVSADELKVLR *SVPHLISSL WSSSP+ASYL
Sbjct: 3585449 PTCATIRSIVSADELKVLRR*SVPHLISSLTWSSSPIASYL 3585571
Score = 62.9 bits (131), Expect(2) = 3e-029
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3 / +1
Query: 234 THLSDNPVYRVSR*IEGFEDVVCSPLDQLLDMVELTDGLV 353
T+L D+P+ + *IEG E+V+C+PLDQLLDMVELTD L+
Sbjct: 3585448 TNLCDDPIDSIG**IEGLEEVICAPLDQLLDMVELTDRLI 3585567
Score = 57.9 bits (120), Expect(2) = 1e-026
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 366 VAAEVRGHR*ARPYQGADQVGNRLHPQNLQFIC*HDRQDCRSG 238
V +V G R*ARP QGADQVG+RL PQ+LQFI + R D R+G
Sbjct: 3585580 VQGQV*GDR*ARPCQGADQVGHRLPPQDLQFISRYYRSDRRTG 3585452
>dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K04, full
insert sequence
Length = 2189
Score = 193 bits (416), Expect = 1e-047
Identities = 75/111 (67%), Positives = 84/111 (75%)
Frame = -3 / +1
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCWMR 177
+YEA+GEL HI++ IKWG DY LKTFNS+ADTIDR+V QVG G TS GS+QPNDHYCWMR
Sbjct: 682 KYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQVGSGATSPGSTQPNDHYCWMR 861
Query: 176 PEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
PEDIDY RPV ECH+CSD SIVFKD+K YS KLV GA L
Sbjct: 862 PEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNKAYSQKLVHGATTL 1014
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 122 bits (260), Expect(2) = 1e-043
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -1
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 12176019 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 12175840
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 12175839 AYSQKLVHGATTL 12175801
Score = 78.5 bits (165), Expect(2) = 1e-043
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = -3 / -1
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+YEA+GEL HI++ IKWG DY LKTFNS+ADTIDR+V QV
Sbjct: 12176226 KYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQV 12176107
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 122 bits (260), Expect(2) = 1e-043
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -1
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 3422288 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 3422109
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 3422108 AYSQKLVHGATTL 3422070
Score = 78.5 bits (165), Expect(2) = 1e-043
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = -3 / -1
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+YEA+GEL HI++ IKWG DY LKTFNS+ADTIDR+V QV
Sbjct: 3422495 KYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQV 3422376
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20,
complete sequence
Length = 144969
Score = 122 bits (260), Expect(2) = 1e-043
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -1
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 100608 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 100429
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 100428 AYSQKLVHGATTL 100390
Score = 78.5 bits (165), Expect(2) = 1e-043
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = -3 / -1
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+YEA+GEL HI++ IKWG DY LKTFNS+ADTIDR+V QV
Sbjct: 100815 KYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQV 100696
>gb|AACV01006539.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006539, whole
genome shotgun sequence
Length = 40585
Score = 122 bits (260), Expect(2) = 1e-043
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -3
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 8810 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 8631
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 8630 AYSQKLVHGATTL 8592
Score = 78.5 bits (165), Expect(2) = 1e-043
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = -3 / -3
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+YEA+GEL HI++ IKWG DY LKTFNS+ADTIDR+V QV
Sbjct: 9017 KYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQV 8898
>gb|AU181006.1|AU181006 AU181006 Rice cDNA from leaf Oryza sativa (japonica cultivar-group)
cDNA clone F10291, mRNA sequence
Length = 300
Score = 157 bits (338), Expect = 6e-037
Identities = 63/79 (79%), Positives = 65/79 (82%)
Frame = -3 / +2
Query: 260 IDRIVAQVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSI 81
IDRIVAQVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SI
Sbjct: 2 IDRIVAQVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASI 181
Query: 80 VFKDSKTYSDKLVKGAKAL 24
VFKDSKTYSDKLV+GAKAL
Sbjct: 182 VFKDSKTYSDKLVRGAKAL 238
Score = 112 bits (239), Expect = 2e-023
Identities = 48/71 (67%), Positives = 54/71 (76%)
Frame = +3 / -3
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 217 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 38
Query: 225 VTYTHLSDNPV 257
VTYTHL D+P+
Sbjct: 37 VTYTHLCDDPI 5
Score = 105 bits (225), Expect = 2e-021
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = +2 / -2
Query: 47 ACRSRFCCP*TLWKLQPGQQPFQTLDLSKSDTR*LAFCSRCPLVSSSSNGH*ADCCL*RC 226
AC+S+ CCP*TLWKLQ GQQPF+ DLSKS T+* + +R PL SSSS+GH* L RC
Sbjct: 215 ACQSKSCCP*TLWKLQQGQQPFRKQDLSKSGTQ*QVWGNRYPLASSSSSGH*VGHHLLRC 36
Query: 227 HLHPPERQS 253
HLHPP R+S
Sbjct: 35 HLHPPVRRS 9
Score = 105 bits (223), Expect = 3e-021
Identities = 48/79 (60%), Positives = 53/79 (67%)
Frame = -2 / +1
Query: 258 RQDCRSGGCR*HL*RQQSA**PLLLDETRGHRLQKASHXXXXXXXXXX*NGCCPGCSFHS 79
R D R+GGCR*HL R **PLLLDE RG+RL + H NGCCP CSFHS
Sbjct: 4 RSDRRTGGCR*HLKRWCPT**PLLLDEARGYRLPQTCH*VPLLLRSCFRNGCCPCCSFHS 183
Query: 78 VQGQQNLLRQARQGRQGPV 22
VQGQQ+LL QAR R+GPV
Sbjct: 184 VQGQQDLL*QARAWRKGPV 240
>gb|AQ794524.1|AQ794524 nbxb0053M11r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0053M11r, DNA sequence
Length = 710
Score = 122 bits (260), Expect(3) = 1e-035
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -1
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 380 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 201
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 200 AYSQKLVHGATTL 162
Score = 36.8 bits (74), Expect(3) = 1e-035
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3 / -2
Query: 356 RYEAIGELDHIKELIKWGTDYILK 285
+Y +G L HI++ I+WG DY L+
Sbjct: 586 KYRPVGNLAHIRDTIRWGADYSLR 515
Score = 32.7 bits (65), Expect(3) = 1e-035
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 305 GTDYILKTFNSSADTIDRIVAQV 237
G + KTFNS+ D IDR+V QV
Sbjct: 536 GGRLLFKTFNSTXDPIDRVVMQV 468
>gb|AU065486.1|AU065486 AU065486 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C20059_1A, mRNA sequence
Length = 344
Score = 149 bits (319), Expect = 3e-034
Identities = 60/88 (68%), Positives = 64/88 (72%)
Frame = -3 / +3
Query: 287 KTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXX 108
KTFNS+ADTIDR V QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD
Sbjct: 3 KTFNSTADTIDRXVMQVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEM 182
Query: 107 XXXXXXXSIVFKDSKTYSDKLVKGAKAL 24
SIVFKD+K YS KLV GA L
Sbjct: 183 AASLAAASIVFKDNKAYSQKLVHGATTL 266
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 145 bits (311), Expect = 3e-033
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / -2
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 30851475 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 30851296
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 30851295 TYSDKLVRGAKAL 30851257
Score = 122 bits (260), Expect = 3e-026
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -3
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 12368381 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 12368202
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 12368201 AYSQKLVHGATTL 12368163
Score = 105 bits (223), Expect = 3e-021
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / +1
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 30851278 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 30851457
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 30851458 VTYTHL 30851475
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 145 bits (311), Expect = 3e-033
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / -1
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 29982730 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 29982551
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 29982550 TYSDKLVRGAKAL 29982512
Score = 122 bits (260), Expect = 3e-026
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -2
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 12076791 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 12076612
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 12076611 AYSQKLVHGATTL 12076573
Score = 105 bits (223), Expect = 3e-021
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / +2
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 29982533 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 29982712
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 29982713 VTYTHL 29982730
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 145 bits (311), Expect = 3e-033
Identities = 57/73 (78%), Positives = 59/73 (80%)
Frame = -3 / -2
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVGVGDTSKG +QPNDHYCWMRPEDIDY RPVTECHSCSD SIVFKDSK
Sbjct: 29891308 QVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSK 29891129
Query: 62 TYSDKLVKGAKAL 24
TYSDKLV+GAKAL
Sbjct: 29891128 TYSDKLVRGAKAL 29891090
Score = 122 bits (260), Expect = 3e-026
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -3 / -3
Query: 242 QVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSK 63
QVG G TS GS+QPNDHYCWMRPEDIDY RPV ECH+CSD SIVFKD+K
Sbjct: 12080028 QVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAASLAAASIVFKDNK 12079849
Query: 62 TYSDKLVKGAKAL 24
YS KLV GA L
Sbjct: 12079848 AYSQKLVHGATTL 12079810
Score = 105 bits (223), Expect = 3e-021
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3 / +2
Query: 45 ELVGVGFAVLEHYGSCSQGSSHFRR*I*ARVTLGDWPFVVDVLWSHPAVMVIRLTAAFRG 224
ELV V AVLEHYGSCS+GSSHF I*ARV L D V+D+LW HPAV+VIRL F G
Sbjct: 29891111 ELVRVSLAVLEHYGSCSKGSSHFGSKI*ARVALSDRSGVIDILWPHPAVVVIRLGTTF*G 29891290
Query: 225 VTYTHL 242
VTYTHL
Sbjct: 29891291 VTYTHL 29891308
>ref|XM_473037.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1872
Score = 80.8 bits (170), Expect(2) = 1e-030
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = -3 / +1
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGV 231
+Y+A+GE DH++ELIKWGTDY+L TFNSSA TID++ +QVG+
Sbjct: 571 KYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQVGI 696
Score = 75.8 bits (159), Expect(2) = 1e-030
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = -3 / +1
Query: 233 VGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYS 54
VG +QP+DHYCW RPED+ Y RPV S D SIVF+D+ YS
Sbjct: 688 VGIAKINGTQPDDHYCWNRPEDMAYPRPVQTAGSAPDLGGEMAAALAAASIVFRDNAAYS 867
Query: 53 DKLVKGAKAL 24
KLV GA A+
Sbjct: 868 KKLVNGAAAV 897
>gb|AACV01010055.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010055, whole
genome shotgun sequence
Length = 22746
Score = 76.7 bits (161), Expect(2) = 1e-027
Identities = 27/40 (67%), Positives = 36/40 (90%)
Frame = -3 / +1
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+Y+A+GE DH++ELIKWGTDY+L TFNSSA TID++ +QV
Sbjct: 11092 KYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQV 11211
Score = 75.8 bits (159), Expect(2) = 1e-027
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = -3 / +2
Query: 233 VGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYS 54
VG +QP+DHYCW RPED+ Y RPV S D SIVF+D+ YS
Sbjct: 11798 VGIAKINGTQPDDHYCWNRPEDMAYPRPVQTAGSAPDLGGEMAAALAAASIVFRDNAAYS 11977
Query: 53 DKLVKGAKAL 24
KLV GA A+
Sbjct: 11978 KKLVNGAAAV 12007
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
complete sequence
Length = 170765
Score = 76.7 bits (161), Expect(2) = 7e-027
Identities = 27/40 (67%), Positives = 36/40 (90%)
Frame = -3 / -2
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+Y+A+GE DH++ELIKWGTDY+L TFNSSA TID++ +QV
Sbjct: 103201 KYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQV 103082
Score = 75.8 bits (159), Expect(2) = 7e-027
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = -3 / -3
Query: 233 VGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYS 54
VG +QP+DHYCW RPED+ Y RPV S D SIVF+D+ YS
Sbjct: 102495 VGIAKINGTQPDDHYCWNRPEDMAYPRPVQTAGSAPDLGGEMAAALAAASIVFRDNAAYS 102316
Query: 53 DKLVKGAKAL 24
KLV GA A+
Sbjct: 102315 KKLVNGAAAV 102286
>ref|NT_079863.2| Oryza sativa (japonica cultivar-group)
Length = 2656602
Score = 76.7 bits (161), Expect(2) = 1e-025
Identities = 27/40 (67%), Positives = 36/40 (90%)
Frame = -3 / -3
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+Y+A+GE DH++ELIKWGTDY+L TFNSSA TID++ +QV
Sbjct: 2445508 KYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQV 2445389
Score = 75.8 bits (159), Expect(2) = 1e-025
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = -3 / -1
Query: 233 VGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYS 54
VG +QP+DHYCW RPED+ Y RPV S D SIVF+D+ YS
Sbjct: 2444802 VGIAKINGTQPDDHYCWNRPEDMAYPRPVQTAGSAPDLGGEMAAALAAASIVFRDNAAYS 2444623
Query: 53 DKLVKGAKAL 24
KLV GA A+
Sbjct: 2444622 KKLVNGAAAV 2444593
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 76.7 bits (161), Expect(2) = 5e-025
Identities = 27/40 (67%), Positives = 36/40 (90%)
Frame = -3 / -1
Query: 356 RYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQV 237
+Y+A+GE DH++ELIKWGTDY+L TFNSSA TID++ +QV
Sbjct: 2760840 KYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQV 2760721
Score = 75.8 bits (159), Expect(2) = 5e-025
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = -3 / -2
Query: 233 VGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDXXXXXXXXXXXXSIVFKDSKTYS 54
VG +QP+DHYCW RPED+ Y RPV S D SIVF+D+ YS
Sbjct: 2760134 VGIAKINGTQPDDHYCWNRPEDMAYPRPVQTAGSAPDLGGEMAAALAAASIVFRDNAAYS 2759955
Query: 53 DKLVKGAKAL 24
KLV GA A+
Sbjct: 2759954 KKLVNGAAAV 2759925
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,240,806,081
Number of Sequences: 438736
Number of extensions: 29125210
Number of successful extensions: 163680
Number of sequences better than 1.0e-020: 40
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 60896573963
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)