TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4573929.2.1
(691 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB681122.1|CB681122 OSJNEf06P20.r OSJNEf Oryza sativa (j... 194 9e-048
gb|CF277249.1|CF277249 14ETL--02-L11.b1 Rice etiolated leaf... 194 9e-048
gb|CF308514.1|CF308514 ABF--02-F22.g1 ABF3-overexpressing t... 194 9e-048
gb|CF309751.1|CF309751 ABF--04-A24.g1 ABF3-overexpressing t... 194 9e-048
dbj|AB087745.1| Oryza sativa (japonica cultivar-group) OsUG... 194 9e-048
ref|XM_476032.1| Oryza sativa (japonica cultivar-group), p... 194 9e-048
gb|CB684794.1|CB684794 OSJNEf14K15.r OSJNEf Oryza sativa (j... 191 6e-047
gb|AU093034.1|AU093034 AU093034 Rice callus Oryza sativa (j... 191 8e-047
gb|CB658458.1|CB658458 OSJNEc14I03.r OSJNEc Oryza sativa (j... 188 4e-046
gb|CF321935.1|CF321935 HD--13-F17.g1 OsHDAC1-overexpressing... 186 3e-045
gb|CF310156.1|CF310156 ABF--04-K17.g1 ABF3-overexpressing t... 177 1e-042
gb|CB684793.1|CB684793 OSJNEf14K15.f OSJNEf Oryza sativa (j... 135 1e-042
gb|CF315233.1|CF315233 HD--04-B06.g1 OsHDAC1-overexpressing... 160 1e-037
dbj|AK066249.1| Oryza sativa (japonica cultivar-group) cDNA... 68 3e-033
gb|CF276200.1|CF276200 14ETL--01-E04.g1 Rice etiolated leaf... 146 3e-033
gb|CF308368.1|CF308368 ABF--02-C17.g1 ABF3-overexpressing t... 146 3e-033
gb|CF309124.1|CF309124 ABF--03-D03.g1 ABF3-overexpressing t... 146 3e-033
dbj|AK121426.1| Oryza sativa (japonica cultivar-group) cDNA... 144 3e-033
ref|XM_450508.1| Oryza sativa (japonica cultivar-group), mRNA 144 3e-033
ref|XM_450509.1| Oryza sativa (japonica cultivar-group), mRNA 144 3e-033
gb|CB649206.1|CB649206 OSJNEb13A07.r OSJNEb Oryza sativa (j... 145 5e-033
gb|CB669622.1|CB669622 OSJNEe02D23.f OSJNEe Oryza sativa (j... 145 5e-033
dbj|AB096863.1| Oryza sativa (japonica cultivar-group) OsUG... 145 5e-033
dbj|AK066269.1| Oryza sativa (japonica cultivar-group) cDNA... 145 5e-033
ref|XM_482070.1| Oryza sativa (japonica cultivar-group), mRNA 145 5e-033
gb|CF308937.1|CF308937 ABF--02-P01.g1 ABF3-overexpressing t... 143 2e-032
gb|CF309463.1|CF309463 ABF--03-K15.g1 ABF3-overexpressing t... 143 2e-032
gb|CF313990.1|CF313990 HD--02-F13.g1 OsHDAC1-overexpressing... 143 2e-032
gb|CB679083.1|CB679083 OSJNEf02C10.r OSJNEf Oryza sativa (j... 142 4e-032
gb|CF309246.1|CF309246 ABF--03-F21.b1 ABF3-overexpressing t... 141 9e-032
gb|CF310061.1|CF310061 ABF--04-I11.g1 ABF3-overexpressing t... 141 9e-032
gb|CF320976.1|CF320976 HD--12-B04.b1 OsHDAC1-overexpressing... 141 9e-032
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 68 3e-031
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 68 3e-031
gb|AC136217.4| Oryza sativa (japonica cultivar-group) chrom... 68 3e-031
gb|AACV01012825.1| Oryza sativa (japonica cultivar-group) c... 68 3e-031
gb|CF309247.1|CF309247 ABF--03-F21.g1 ABF3-overexpressing t... 138 6e-031
gb|CF312561.1|CF312561 ABF--08-F24.b1 ABF3-overexpressing t... 138 6e-031
gb|CF320798.1|CF320798 HD--11-N03.b1 OsHDAC1-overexpressing... 138 6e-031
gb|CF314144.1|CF314144 HD--02-I24.g1 OsHDAC1-overexpressing... 134 1e-029
gb|CB669623.1|CB669623 OSJNEe02D23.r OSJNEe Oryza sativa (j... 131 7e-029
gb|CF309927.1|CF309927 ABF--04-F05.g1 ABF3-overexpressing t... 129 2e-028
gb|CF310802.1|CF310802 ABF--05-K18.b1 ABF3-overexpressing t... 127 1e-027
gb|CF292804.1|CF292804 30DGS--01-M06.b1 Rice leaf plasmid c... 126 2e-027
gb|AU096552.1|AU096552 AU096552 Rice green shoot Oryza sati... 126 3e-027
gb|CB665376.1|CB665376 OSJNEd11L17.r OSJNEd Oryza sativa (j... 126 3e-027
gb|CF324844.1|CF324844 JMT1--01-K01.g1 AtJMT-overexpressing... 126 3e-027
dbj|AB097460.1| Oryza sativa (japonica cultivar-group) OsUG... 126 3e-027
dbj|AK073610.1| Oryza sativa (japonica cultivar-group) cDNA... 126 3e-027
dbj|AK104977.1| Oryza sativa (japonica cultivar-group) cDNA... 126 3e-027
dbj|AK070317.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-024
gb|CF336872.1|CF336872 JMT--07-B11.b1 AtJMT-overexpressing ... 116 3e-024
gb|CF307798.1|CF307798 ABF--01-F19.b1 ABF3-overexpressing t... 96 3e-023
gb|AU161347.1|AU161347 AU161347 Rice callus Oryza sativa (j... 110 2e-022
dbj|AK063871.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-022
gb|AU174074.1|AU174074 AU174074 Rice green shoot Oryza sati... 105 5e-021
gb|CF320518.1|CF320518 HD--11-H04.b1 OsHDAC1-overexpressing... 104 1e-020
>gb|CB681122.1|CB681122 OSJNEf06P20.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06P20 3', mRNA sequence
Length = 841
Score = 194 bits (418), Expect = 9e-048
Identities = 79/96 (82%), Positives = 81/96 (84%)
Frame = +1 / -2
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 663 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 484
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 483 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 376
Score = 162 bits (349), Expect = 3e-038
Identities = 75/102 (73%), Positives = 77/102 (75%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 356 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 535
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 536 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 661
>gb|CF277249.1|CF277249 14ETL--02-L11.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-L11, mRNA sequence
Length = 632
Score = 194 bits (418), Expect = 9e-048
Identities = 79/96 (82%), Positives = 81/96 (84%)
Frame = +1 / -3
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 627 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 448
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 447 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 340
Score = 162 bits (349), Expect = 3e-038
Identities = 75/102 (73%), Positives = 77/102 (75%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 320 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 499
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 500 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 625
>gb|CF308514.1|CF308514 ABF--02-F22.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-F22, mRNA sequence
Length = 602
Score = 194 bits (418), Expect = 9e-048
Identities = 79/96 (82%), Positives = 81/96 (84%)
Frame = +1 / -2
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 574 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 395
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 394 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 287
Score = 162 bits (349), Expect = 3e-038
Identities = 75/102 (73%), Positives = 77/102 (75%)
Frame = -3 / +3
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 267 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 446
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 447 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 572
>gb|CF309751.1|CF309751 ABF--04-A24.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-A24, mRNA sequence
Length = 633
Score = 194 bits (418), Expect = 9e-048
Identities = 79/96 (82%), Positives = 81/96 (84%)
Frame = +1 / -1
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 630 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 451
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 450 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 343
Score = 162 bits (349), Expect = 3e-038
Identities = 75/102 (73%), Positives = 77/102 (75%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 323 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 502
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 503 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 628
>dbj|AB087745.1| Oryza sativa (japonica cultivar-group) OsUGE-1 mRNA for UDP-glucose
4-epimerase, complete cds
Length = 1346
Score = 194 bits (418), Expect = 9e-048
Identities = 79/96 (82%), Positives = 81/96 (84%)
Frame = +1 / +3
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 840 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 1019
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 1020 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 1127
Score = 162 bits (349), Expect = 3e-038
Identities = 75/102 (73%), Positives = 77/102 (75%)
Frame = -3 / -2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 1147 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 968
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 967 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 842
>ref|XM_476032.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1065
Score = 194 bits (418), Expect = 9e-048
Identities = 79/96 (82%), Positives = 81/96 (84%)
Frame = +1 / +1
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 754 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 933
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 934 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 1041
Score = 162 bits (349), Expect = 3e-038
Identities = 75/102 (73%), Positives = 77/102 (75%)
Frame = -3 / -2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 1061 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 882
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 881 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 756
>gb|CB684794.1|CB684794 OSJNEf14K15.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14K15 3', mRNA sequence
Length = 714
Score = 191 bits (412), Expect = 6e-047
Identities = 78/96 (81%), Positives = 80/96 (83%)
Frame = +1 / -1
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKA GKKIPLVFAGRRPGDAEIVY
Sbjct: 678 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKAFGKKIPLVFAGRRPGDAEIVY 499
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 498 AQTAKAEKDLKWKAKYGVEEMCRDLWNWASKNPYGY 391
Score = 121 bits (259), Expect(2) = 1e-034
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -3 / +2
Query: 230 TISASPGLRPANTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
TISASPGLRPANT GIFFP+AFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 503 TISASPGLRPANTSGIFFPKAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 676
Score = 49.2 bits (101), Expect(2) = 1e-034
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPY 279
LL YP GFLLAQFHRSLHISS PY
Sbjct: 371 LLLSGDPYP*GFLLAQFHRSLHISSTPY 454
>gb|AU093034.1|AU093034 AU093034 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61726, mRNA sequence
Length = 701
Score = 191 bits (411), Expect = 8e-047
Identities = 78/96 (81%), Positives = 80/96 (83%)
Frame = +1 / +1
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 112 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 291
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASK PYGY
Sbjct: 292 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKXPYGY 399
Score = 159 bits (342), Expect = 3e-037
Identities = 74/102 (72%), Positives = 76/102 (74%)
Frame = -3 / -1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP G LLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 419 LLLSGDPYP*GXLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 240
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 239 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 114
>gb|CB658458.1|CB658458 OSJNEc14I03.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14I03 3', mRNA sequence
Length = 730
Score = 188 bits (406), Expect = 4e-046
Identities = 77/96 (80%), Positives = 79/96 (82%)
Frame = +1 / -1
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLG GKGTSVLEMVAAFEKA GKKIPLVFAGRRPGDAEIVY
Sbjct: 667 IAALRKLYEDSDRIGCEVYNLGPGKGTSVLEMVAAFEKAFGKKIPLVFAGRRPGDAEIVY 488
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 487 AQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 380
Score = 157 bits (338), Expect = 1e-036
Identities = 73/102 (71%), Positives = 76/102 (74%)
Frame = -3 / +3
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 360 LLLAGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 539
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFP+AFSNAATIS+TDVPFP P+LYTS PILSESS*SFL AA
Sbjct: 540 FFPKAFSNAATISSTDVPFPGPRLYTSHPILSESS*SFLNAA 665
>gb|CF321935.1|CF321935 HD--13-F17.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--13-F17, mRNA sequence
Length = 564
Score = 186 bits (400), Expect = 3e-045
Identities = 76/96 (79%), Positives = 79/96 (82%)
Frame = +1 / -1
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 447 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 268
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWA+ PYGY
Sbjct: 267 AQTAKAEKELKWKAKYGVEEMCRDLWNWAN*TPYGY 160
Score = 155 bits (332), Expect = 7e-036
Identities = 72/102 (70%), Positives = 74/102 (72%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP G AQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 140 LLLSGDPYP*GVQFAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 319
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 320 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 445
>gb|CF310156.1|CF310156 ABF--04-K17.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-K17, mRNA sequence
Length = 588
Score = 177 bits (381), Expect = 1e-042
Identities = 71/88 (80%), Positives = 73/88 (82%)
Frame = +1 / -3
Query: 79 EDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXX 258
EDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 586 EDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEK 407
Query: 259 XXXXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 406 ELKWKAKYGVEEMCRDLWNWASKNPYGY 323
Score = 152 bits (326), Expect = 4e-035
Identities = 69/95 (72%), Positives = 71/95 (74%)
Frame = -3 / +3
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 303 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 482
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS 78
FFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS
Sbjct: 483 FFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS 587
>gb|CB684793.1|CB684793 OSJNEf14K15.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14K15 5', mRNA sequence
Length = 651
Score = 135 bits (289), Expect(2) = 1e-042
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +1 / +3
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAA RKLYEDSD+IGCEVYNLGTGKGTS LEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 6 IAAPRKLYEDSDRIGCEVYNLGTGKGTSALEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 185
Score = 120 bits (256), Expect(2) = 3e-034
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -3 / -3
Query: 230 TISASPGLRPANTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
TISASPGLRPANT GIFFPEAFSNAATIS+ DVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 181 TISASPGLRPANTSGIFFPEAFSNAATISSADVPFPVPRLYTSHPILSESS*SFLGAA 8
Score = 83.1 bits (175), Expect(2) = 1e-021
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -2 / -2
Query: 246 GSCGVDDLCVSGSSPSEHQRDFLPRSLLECSHHFQHGRPLSSPQVVHFTAYFVGVFVELP 67
GS V+DL +S S S+++RDFL RS LEC +HFQ PLSS Q+VH T+Y + +F+ELP
Sbjct: 197 GSLSVNDLGISRPSSSKYKRDFLSRSFLECCNHFQRRCPLSSAQIVHLTSYSIRIFIELP 18
Score = 62.0 bits (129), Expect(2) = 1e-042
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 280 YGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 232 YGVEEMCRDLWNWASKNPYGY 294
Score = 49.2 bits (101), Expect(2) = 3e-034
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -3 / -2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPY 279
LL YP GFLLAQFHRSLHISS PY
Sbjct: 314 LLLSGDPYP*GFLLAQFHRSLHISSTPY 231
Score = 44.1 bits (90), Expect(2) = 1e-021
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -1 / -3
Query: 370 FICCCRVTQRTRTGSCSPSSTDLCTSPRSRTWPSI*AP 257
+I C TR GSCSP+ST CTSP R PSI P
Sbjct: 322 WISCYCPAIHTRRGSCSPNSTGPCTSPLPRILPSISVP 209
>gb|CF315233.1|CF315233 HD--04-B06.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-B06, mRNA sequence
Length = 673
Score = 160 bits (344), Expect = 1e-037
Identities = 69/95 (72%), Positives = 73/95 (76%)
Frame = +1 / -2
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 627 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 448
Query: 235 XXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYG 339
YG+EEMCRD ++ P G
Sbjct: 447 AQTAKAEKELKWKAKYGVEEMCRDRGIGRARTPTG 343
Score = 142 bits (304), Expect = 5e-032
Identities = 66/94 (70%), Positives = 68/94 (72%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P G L RSLHISS PY *TISASPGLRPANT GIFFPEAFSN
Sbjct: 344 PVGVLARPIPRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGIFFPEAFSN 523
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
AATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 524 AATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 625
Score = 97.3 bits (206), Expect(2) = 1e-023
Identities = 45/79 (56%), Positives = 52/79 (65%)
Frame = +2 / -3
Query: 65 *GSSTKTPTK*AVKCTTWGLERGRPCWKWWLHSRRLLGRKSLWCSLGEDPETQRSSTPQL 244
*GSS K +* V+CT W LERG CWKW HSR+LL RKS L E E RS T +L
Sbjct: 617 *GSSMKILIE*DVRCTIWALERGHLCWKWLQHSRKLLERKSRLYLLDEGLEMPRSFTLKL 438
Query: 245 PRQRRSSNGRPSTGSRRCA 301
P+ RR+ NGR +TG RRCA
Sbjct: 437 PKLRRN*NGRQNTG*RRCA 381
Score = 36.8 bits (74), Expect(2) = 1e-023
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 310 WNWASKNPYGY 342
WNWASKNPYGY
Sbjct: 373 WNWASKNPYGY 341
>dbj|AK066249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I17, full
insert sequence
Length = 3495
Score = 68.4 bits (143), Expect(4) = 3e-033
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1 / +2
Query: 97 GCEVYNLGTGKGTSVLEMVAAFEKASGK 180
GCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 2993 GCEVYNLGTGKGTSVLEMVAAFEKASGK 3076
Score = 64.8 bits (135), Expect(4) = 1e-024
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3 / -1
Query: 179 FPEAFSNAATISNTDVPFPVPKLYTSQP 96
FPEAFSNAATIS+TDVPFPVP+LYTS P
Sbjct: 3075 FPEAFSNAATISSTDVPFPVPRLYTSHP 2992
Score = 62.0 bits (129), Expect(4) = 3e-033
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 280 YGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 3401 YGVEEMCRDLWNWASKNPYGY 3463
Score = 49.2 bits (101), Expect(4) = 1e-024
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPY 279
LL YP GFLLAQFHRSLHISS PY
Sbjct: 3483 LLLSGDPYP*GFLLAQFHRSLHISSTPY 3400
Score = 46.0 bits (94), Expect(4) = 3e-033
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / +2
Query: 178 KKIPLVFAGRRPGDAEIVY 234
+KIPLVFAGRRPGDAEIVY
Sbjct: 3197 QKIPLVFAGRRPGDAEIVY 3253
Score = 39.6 bits (80), Expect(4) = 1e-024
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / -1
Query: 230 TISASPGLRPANTRGIF 180
TISASPGLRPANT GIF
Sbjct: 3249 TISASPGLRPANTSGIF 3199
Score = 35.0 bits (70), Expect(4) = 3e-033
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +1
Query: 55 IAALRKLYEDSDKIG 99
IAALRKLYEDSD+IG
Sbjct: 2848 IAALRKLYEDSDRIG 2892
Score = 28.1 bits (55), Expect(4) = 1e-024
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3 / -2
Query: 98 PILSESS*SFLRAA 57
PILSESS*SFL AA
Sbjct: 2891 PILSESS*SFLNAA 2850
>gb|CF276200.1|CF276200 14ETL--01-E04.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-E04, mRNA sequence
Length = 611
Score = 146 bits (313), Expect = 3e-033
Identities = 59/75 (78%), Positives = 60/75 (80%)
Frame = +1 / -1
Query: 118 GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEM 297
GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEM
Sbjct: 611 GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEM 432
Query: 298 CRDLWNWASKNPYGY 342
CRDLWNWASKNPYGY
Sbjct: 431 CRDLWNWASKNPYGY 387
Score = 124 bits (265), Expect = 1e-026
Identities = 57/81 (70%), Positives = 58/81 (71%)
Frame = -3 / +1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 367 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 546
Query: 182 FFPEAFSNAATISNTDVPFPV 120
FFPEAFSNAATIS+TDVPFPV
Sbjct: 547 FFPEAFSNAATISSTDVPFPV 609
>gb|CF308368.1|CF308368 ABF--02-C17.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-C17, mRNA sequence
Length = 568
Score = 146 bits (313), Expect = 3e-033
Identities = 59/75 (78%), Positives = 60/75 (80%)
Frame = +1 / -2
Query: 118 GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEM 297
GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEM
Sbjct: 567 GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEM 388
Query: 298 CRDLWNWASKNPYGY 342
CRDLWNWASKNPYGY
Sbjct: 387 CRDLWNWASKNPYGY 343
Score = 127 bits (272), Expect = 1e-027
Identities = 58/82 (70%), Positives = 59/82 (71%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 323 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 502
Query: 182 FFPEAFSNAATISNTDVPFPVP 117
FFPEAFSNAATIS+TDVPFPVP
Sbjct: 503 FFPEAFSNAATISSTDVPFPVP 568
>gb|CF309124.1|CF309124 ABF--03-D03.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-D03, mRNA sequence
Length = 574
Score = 146 bits (313), Expect = 3e-033
Identities = 59/75 (78%), Positives = 60/75 (80%)
Frame = +1 / -2
Query: 118 GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEM 297
GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEM
Sbjct: 573 GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEM 394
Query: 298 CRDLWNWASKNPYGY 342
CRDLWNWASKNPYGY
Sbjct: 393 CRDLWNWASKNPYGY 349
Score = 127 bits (272), Expect = 1e-027
Identities = 58/82 (70%), Positives = 59/82 (71%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 329 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 508
Query: 182 FFPEAFSNAATISNTDVPFPVP 117
FFPEAFSNAATIS+TDVPFPVP
Sbjct: 509 FFPEAFSNAATISSTDVPFPVP 574
>dbj|AK121426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135L03, full
insert sequence
Length = 1419
Score = 144 bits (308), Expect(2) = 3e-033
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +1 / +2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC+ YNLGTGKGTSVLE+V AFEK SGKKIPLV RRPGDAEI++
Sbjct: 905 IGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDAEILFSSAAKAEREFKWK 1084
Query: 274 XXYGIEEMCRDLWNWASKNPYGYA 345
YGIEEMCRD WNWASKNP+GYA
Sbjct: 1085 AKYGIEEMCRDQWNWASKNPFGYA 1156
Score = 122 bits (261), Expect = 4e-026
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -3 / -1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
L+ AYP GFLLAQFH SLHISS+PY ISASPG R T+GI
Sbjct: 1173 LVESGEAYPKGFLLAQFHWSLHISSMPYFAFHLNSLSALAADEKRISASPGRRGPITKGI 994
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPI 93
FFPE FSNA TISNTDVPFPVP+LY PI
Sbjct: 993 FFPETFSNALTISNTDVPFPVPRLYA*HPI 904
Score = 22.1 bits (42), Expect(2) = 3e-033
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 55 IAALRKLYEDS 87
IAALRKL+E S
Sbjct: 872 IAALRKLFESS 904
>ref|XM_450508.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1419
Score = 144 bits (308), Expect(2) = 3e-033
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +1 / +2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC+ YNLGTGKGTSVLE+V AFEK SGKKIPLV RRPGDAEI++
Sbjct: 905 IGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDAEILFSSAAKAEREFKWK 1084
Query: 274 XXYGIEEMCRDLWNWASKNPYGYA 345
YGIEEMCRD WNWASKNP+GYA
Sbjct: 1085 AKYGIEEMCRDQWNWASKNPFGYA 1156
Score = 122 bits (261), Expect = 4e-026
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -3 / -1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
L+ AYP GFLLAQFH SLHISS+PY ISASPG R T+GI
Sbjct: 1173 LVESGEAYPKGFLLAQFHWSLHISSMPYFAFHLNSLSALAADEKRISASPGRRGPITKGI 994
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPI 93
FFPE FSNA TISNTDVPFPVP+LY PI
Sbjct: 993 FFPETFSNALTISNTDVPFPVPRLYA*HPI 904
Score = 22.1 bits (42), Expect(2) = 3e-033
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 55 IAALRKLYEDS 87
IAALRKL+E S
Sbjct: 872 IAALRKLFESS 904
>ref|XM_450509.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1110
Score = 144 bits (308), Expect(2) = 3e-033
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +1 / +1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC+ YNLGTGKGTSVLE+V AFEK SGKKIPLV RRPGDAEI++
Sbjct: 820 IGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDAEILFSSAAKAEREFKWK 999
Query: 274 XXYGIEEMCRDLWNWASKNPYGYA 345
YGIEEMCRD WNWASKNP+GYA
Sbjct: 1000 AKYGIEEMCRDQWNWASKNPFGYA 1071
Score = 122 bits (261), Expect = 4e-026
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -3 / -2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
L+ AYP GFLLAQFH SLHISS+PY ISASPG R T+GI
Sbjct: 1088 LVESGEAYPKGFLLAQFHWSLHISSMPYFAFHLNSLSALAADEKRISASPGRRGPITKGI 909
Query: 182 FFPEAFSNAATISNTDVPFPVPKLYTSQPI 93
FFPE FSNA TISNTDVPFPVP+LY PI
Sbjct: 908 FFPETFSNALTISNTDVPFPVPRLYA*HPI 819
Score = 22.1 bits (42), Expect(2) = 3e-033
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 55 IAALRKLYEDS 87
IAALRKL+E S
Sbjct: 787 IAALRKLFESS 819
>gb|CB649206.1|CB649206 OSJNEb13A07.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13A07 3', mRNA sequence
Length = 869
Score = 145 bits (311), Expect = 5e-033
Identities = 57/87 (65%), Positives = 64/87 (73%)
Frame = +1 / -3
Query: 82 DSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXX 261
+S IGCE YNLGTGKGTSVLE+V AFEKASGKKIPL+ RRPGDAEI++
Sbjct: 774 ESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKE 595
Query: 262 XXXXXXYGIEEMCRDLWNWASKNPYGY 342
+GI+EMCRD WNWASKNPYGY
Sbjct: 594 LNWKAKFGIDEMCRDQWNWASKNPYGY 514
Score = 112 bits (240), Expect = 3e-023
Identities = 52/99 (52%), Positives = 58/99 (58%)
Frame = -3 / +2
Query: 377 WVVHLLLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPA 198
W L+ YP GFLLAQFH SLHISS+P ISASPG
Sbjct: 479 WCPFCLVESSDPYP*GFLLAQFH*SLHISSMPNFAFQLSSFSALAGNENRISASPGRLGP 658
Query: 197 NTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSES 81
RGIFFPEAFSNA TIS+T+VP PVP+LY S P+L S
Sbjct: 659 IIRGIFFPEAFSNALTISSTEVPLPVPRLYASHPMLELS 775
>gb|CB669622.1|CB669622 OSJNEe02D23.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02D23 5', mRNA sequence
Length = 884
Score = 145 bits (311), Expect = 5e-033
Identities = 57/87 (65%), Positives = 64/87 (73%)
Frame = +1 / +3
Query: 82 DSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXX 261
+S IGCE YNLGTGKGTSVLE+V AFEKASGKKIPL+ RRPGDAEI++
Sbjct: 399 ESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKE 578
Query: 262 XXXXXXYGIEEMCRDLWNWASKNPYGY 342
+GI+EMCRD WNWASKNPYGY
Sbjct: 579 LNWKAKFGIDEMCRDQWNWASKNPYGY 659
Score = 112 bits (240), Expect = 3e-023
Identities = 52/99 (52%), Positives = 58/99 (58%)
Frame = -3 / -2
Query: 377 WVVHLLLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPA 198
W L+ YP GFLLAQFH SLHISS+P ISASPG
Sbjct: 694 WCPFCLVESSDPYP*GFLLAQFH*SLHISSMPNFAFQLSSFSALAGNENRISASPGRLGP 515
Query: 197 NTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSES 81
RGIFFPEAFSNA TIS+T+VP PVP+LY S P+L S
Sbjct: 514 IIRGIFFPEAFSNALTISSTEVPLPVPRLYASHPMLELS 398
>dbj|AB096863.1| Oryza sativa (japonica cultivar-group) OsUGE-2 mRNA for putative
UDP-glucose 4-epimerase, complete cds
Length = 1736
Score = 145 bits (311), Expect = 5e-033
Identities = 57/87 (65%), Positives = 64/87 (73%)
Frame = +1 / +1
Query: 82 DSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXX 261
+S IGCE YNLGTGKGTSVLE+V AFEKASGKKIPL+ RRPGDAEI++
Sbjct: 1018 ESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKE 1197
Query: 262 XXXXXXYGIEEMCRDLWNWASKNPYGY 342
+GI+EMCRD WNWASKNPYGY
Sbjct: 1198 LNWKAKFGIDEMCRDQWNWASKNPYGY 1278
Score = 112 bits (240), Expect = 3e-023
Identities = 52/99 (52%), Positives = 58/99 (58%)
Frame = -3 / -1
Query: 377 WVVHLLLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPA 198
W L+ YP GFLLAQFH SLHISS+P ISASPG
Sbjct: 1313 WCPFCLVESSDPYP*GFLLAQFH*SLHISSMPNFAFQLSSFSALAGNENRISASPGRLGP 1134
Query: 197 NTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSES 81
RGIFFPEAFSNA TIS+T+VP PVP+LY S P+L S
Sbjct: 1133 IIRGIFFPEAFSNALTISSTEVPLPVPRLYASHPMLELS 1017
>dbj|AK066269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059D16, full
insert sequence
Length = 1878
Score = 145 bits (311), Expect = 5e-033
Identities = 57/87 (65%), Positives = 64/87 (73%)
Frame = +1 / +2
Query: 82 DSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXX 261
+S IGCE YNLGTGKGTSVLE+V AFEKASGKKIPL+ RRPGDAEI++
Sbjct: 1043 ESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKE 1222
Query: 262 XXXXXXYGIEEMCRDLWNWASKNPYGY 342
+GI+EMCRD WNWASKNPYGY
Sbjct: 1223 LNWKAKFGIDEMCRDQWNWASKNPYGY 1303
Score = 112 bits (240), Expect = 3e-023
Identities = 52/99 (52%), Positives = 58/99 (58%)
Frame = -3 / -1
Query: 377 WVVHLLLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPA 198
W L+ YP GFLLAQFH SLHISS+P ISASPG
Sbjct: 1338 WCPFCLVESSDPYP*GFLLAQFH*SLHISSMPNFAFQLSSFSALAGNENRISASPGRLGP 1159
Query: 197 NTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSES 81
RGIFFPEAFSNA TIS+T+VP PVP+LY S P+L S
Sbjct: 1158 IIRGIFFPEAFSNALTISSTEVPLPVPRLYASHPMLELS 1042
>ref|XM_482070.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1878
Score = 145 bits (311), Expect = 5e-033
Identities = 57/87 (65%), Positives = 64/87 (73%)
Frame = +1 / +2
Query: 82 DSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXX 261
+S IGCE YNLGTGKGTSVLE+V AFEKASGKKIPL+ RRPGDAEI++
Sbjct: 1043 ESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKE 1222
Query: 262 XXXXXXYGIEEMCRDLWNWASKNPYGY 342
+GI+EMCRD WNWASKNPYGY
Sbjct: 1223 LNWKAKFGIDEMCRDQWNWASKNPYGY 1303
Score = 112 bits (240), Expect = 3e-023
Identities = 52/99 (52%), Positives = 58/99 (58%)
Frame = -3 / -1
Query: 377 WVVHLLLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPA 198
W L+ YP GFLLAQFH SLHISS+P ISASPG
Sbjct: 1338 WCPFCLVESSDPYP*GFLLAQFH*SLHISSMPNFAFQLSSFSALAGNENRISASPGRLGP 1159
Query: 197 NTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSES 81
RGIFFPEAFSNA TIS+T+VP PVP+LY S P+L S
Sbjct: 1158 IIRGIFFPEAFSNALTISSTEVPLPVPRLYASHPMLELS 1042
>gb|CF308937.1|CF308937 ABF--02-P01.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-P01, mRNA sequence
Length = 561
Score = 143 bits (307), Expect = 2e-032
Identities = 58/74 (78%), Positives = 59/74 (79%)
Frame = +1 / -1
Query: 121 TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMC 300
TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMC
Sbjct: 561 TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMC 382
Query: 301 RDLWNWASKNPYGY 342
RDLWNWASKNPYGY
Sbjct: 381 RDLWNWASKNPYGY 340
Score = 122 bits (261), Expect = 4e-026
Identities = 56/80 (70%), Positives = 57/80 (71%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 320 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 499
Query: 182 FFPEAFSNAATISNTDVPFP 123
FFPEAFSNAATIS+TDVPFP
Sbjct: 500 FFPEAFSNAATISSTDVPFP 559
>gb|CF309463.1|CF309463 ABF--03-K15.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-K15, mRNA sequence
Length = 561
Score = 143 bits (307), Expect = 2e-032
Identities = 58/74 (78%), Positives = 59/74 (79%)
Frame = +1 / -1
Query: 121 TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMC 300
TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMC
Sbjct: 561 TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMC 382
Query: 301 RDLWNWASKNPYGY 342
RDLWNWASKNPYGY
Sbjct: 381 RDLWNWASKNPYGY 340
Score = 122 bits (261), Expect = 4e-026
Identities = 56/80 (70%), Positives = 57/80 (71%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 320 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 499
Query: 182 FFPEAFSNAATISNTDVPFP 123
FFPEAFSNAATIS+TDVPFP
Sbjct: 500 FFPEAFSNAATISSTDVPFP 559
>gb|CF313990.1|CF313990 HD--02-F13.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-F13, mRNA sequence
Length = 563
Score = 143 bits (307), Expect = 2e-032
Identities = 58/74 (78%), Positives = 59/74 (79%)
Frame = +1 / -3
Query: 121 TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMC 300
TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMC
Sbjct: 561 TGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMC 382
Query: 301 RDLWNWASKNPYGY 342
RDLWNWASKNPYGY
Sbjct: 381 RDLWNWASKNPYGY 340
Score = 124 bits (265), Expect = 1e-026
Identities = 57/81 (70%), Positives = 58/81 (71%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 320 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 499
Query: 182 FFPEAFSNAATISNTDVPFPV 120
FFPEAFSNAATIS+TDVPFPV
Sbjct: 500 FFPEAFSNAATISSTDVPFPV 562
>gb|CB679083.1|CB679083 OSJNEf02C10.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02C10 3', mRNA sequence
Length = 792
Score = 142 bits (305), Expect = 4e-032
Identities = 56/87 (64%), Positives = 63/87 (72%)
Frame = +1 / -1
Query: 82 DSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXX 261
+S IGCE YNLGTGKGTSVLE+V AFEKA GKKIPL+ RRPGDAEI++
Sbjct: 774 ESSSIGCEAYNLGTGKGTSVLEIVKAFEKAFGKKIPLIIGPRRPGDAEILFSLPAKAEKE 595
Query: 262 XXXXXXYGIEEMCRDLWNWASKNPYGY 342
+GI+EMCRD WNWASKNPYGY
Sbjct: 594 LNWKAKFGIDEMCRDQWNWASKNPYGY 514
Score = 111 bits (236), Expect = 1e-022
Identities = 51/99 (51%), Positives = 58/99 (58%)
Frame = -3 / +2
Query: 377 WVVHLLLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPA 198
W L+ YP GFLLAQFH SLHISS+P ISASPG
Sbjct: 479 WCPFCLVESSDPYP*GFLLAQFH*SLHISSMPNFAFQLSSFSALAGNENRISASPGRLGP 658
Query: 197 NTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSES 81
RGIFFP+AFSNA TIS+T+VP PVP+LY S P+L S
Sbjct: 659 IIRGIFFPKAFSNALTISSTEVPLPVPRLYASHPMLELS 775
>gb|CF309246.1|CF309246 ABF--03-F21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-F21, mRNA sequence
Length = 594
Score = 141 bits (302), Expect = 9e-032
Identities = 61/77 (79%), Positives = 62/77 (80%)
Frame = +1 / +1
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY
Sbjct: 364 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 543
Query: 235 XXXXXXXXXXXXXXXYG 285
YG
Sbjct: 544 AQTAKAEKELKWKAKYG 594
Score = 123 bits (263), Expect = 2e-026
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = -3 / -2
Query: 230 TISASPGLRPANTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
TISASPGLRPANT GIFFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 539 TISASPGLRPANTSGIFFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 366
>gb|CF310061.1|CF310061 ABF--04-I11.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-I11, mRNA sequence
Length = 564
Score = 141 bits (302), Expect = 9e-032
Identities = 57/73 (78%), Positives = 58/73 (79%)
Frame = +1 / -3
Query: 124 GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCR 303
GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMCR
Sbjct: 562 GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCR 383
Query: 304 DLWNWASKNPYGY 342
DLWNWASKNPYGY
Sbjct: 382 DLWNWASKNPYGY 344
Score = 122 bits (261), Expect = 4e-026
Identities = 56/80 (70%), Positives = 57/80 (71%)
Frame = -3 / +3
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 324 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 503
Query: 182 FFPEAFSNAATISNTDVPFP 123
FFPEAFSNAATIS+TDVPFP
Sbjct: 504 FFPEAFSNAATISSTDVPFP 563
>gb|CF320976.1|CF320976 HD--12-B04.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-B04, mRNA sequence
Length = 557
Score = 141 bits (302), Expect = 9e-032
Identities = 57/73 (78%), Positives = 58/73 (79%)
Frame = +1 / -3
Query: 124 GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCR 303
GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMCR
Sbjct: 555 GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCR 376
Query: 304 DLWNWASKNPYGY 342
DLWNWASKNPYGY
Sbjct: 375 DLWNWASKNPYGY 337
Score = 122 bits (261), Expect = 4e-026
Identities = 56/80 (70%), Positives = 57/80 (71%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 317 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 496
Query: 182 FFPEAFSNAATISNTDVPFP 123
FFPEAFSNAATIS+TDVPFP
Sbjct: 497 FFPEAFSNAATISSTDVPFP 556
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 68.4 bits (143), Expect(4) = 3e-031
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1 / +1
Query: 97 GCEVYNLGTGKGTSVLEMVAAFEKASGK 180
GCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 11830330 GCEVYNLGTGKGTSVLEMVAAFEKASGK 11830413
Score = 62.0 bits (129), Expect(4) = 3e-031
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 280 YGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 11830738 YGVEEMCRDLWNWASKNPYGY 11830800
Score = 35.0 bits (70), Expect(4) = 3e-031
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +3
Query: 55 IAALRKLYEDSDKIG 99
IAALRKLYEDSD+IG
Sbjct: 11830185 IAALRKLYEDSDRIG 11830229
Score = 29.0 bits (57), Expect(4) = 3e-031
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2 / +2
Query: 173 LGRKSLWCSLGEDPETQRSSTPQLPRQRRSSNG 271
L RKS L E E RS T +LP+ RR+ NG
Sbjct: 11830529 LNRKSRLYLLDEGLEMPRSFTLKLPKLRRN*NG 11830627
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 68.4 bits (143), Expect(4) = 3e-031
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1 / +3
Query: 97 GCEVYNLGTGKGTSVLEMVAAFEKASGK 180
GCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 1049571 GCEVYNLGTGKGTSVLEMVAAFEKASGK 1049654
Score = 62.0 bits (129), Expect(4) = 3e-031
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 280 YGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 1049979 YGVEEMCRDLWNWASKNPYGY 1050041
Score = 35.0 bits (70), Expect(4) = 3e-031
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +2
Query: 55 IAALRKLYEDSDKIG 99
IAALRKLYEDSD+IG
Sbjct: 1049426 IAALRKLYEDSDRIG 1049470
Score = 29.0 bits (57), Expect(4) = 3e-031
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2 / +1
Query: 173 LGRKSLWCSLGEDPETQRSSTPQLPRQRRSSNG 271
L RKS L E E RS T +LP+ RR+ NG
Sbjct: 1049770 LNRKSRLYLLDEGLEMPRSFTLKLPKLRRN*NG 1049868
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0030I14, complete sequence
Length = 159035
Score = 68.4 bits (143), Expect(4) = 3e-031
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1 / +2
Query: 97 GCEVYNLGTGKGTSVLEMVAAFEKASGK 180
GCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 62672 GCEVYNLGTGKGTSVLEMVAAFEKASGK 62755
Score = 64.8 bits (135), Expect(4) = 7e-023
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3 / -3
Query: 179 FPEAFSNAATISNTDVPFPVPKLYTSQP 96
FPEAFSNAATIS+TDVPFPVP+LYTS P
Sbjct: 62754 FPEAFSNAATISSTDVPFPVPRLYTSHP 62671
Score = 62.0 bits (129), Expect(4) = 3e-031
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 280 YGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 63080 YGVEEMCRDLWNWASKNPYGY 63142
Score = 49.2 bits (101), Expect(4) = 7e-023
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -3 / -3
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPY 279
LL YP GFLLAQFHRSLHISS PY
Sbjct: 63162 LLLSGDPYP*GFLLAQFHRSLHISSTPY 63079
Score = 35.0 bits (70), Expect(4) = 3e-031
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +1
Query: 55 IAALRKLYEDSDKIG 99
IAALRKLYEDSD+IG
Sbjct: 62527 IAALRKLYEDSDRIG 62571
Score = 29.0 bits (57), Expect(4) = 3e-031
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2 / +3
Query: 173 LGRKSLWCSLGEDPETQRSSTPQLPRQRRSSNG 271
L RKS L E E RS T +LP+ RR+ NG
Sbjct: 62871 LNRKSRLYLLDEGLEMPRSFTLKLPKLRRN*NG 62969
Score = 28.1 bits (55), Expect(4) = 7e-023
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3 / -1
Query: 98 PILSESS*SFLRAA 57
PILSESS*SFL AA
Sbjct: 62570 PILSESS*SFLNAA 62529
Score = 23.5 bits (45), Expect(4) = 7e-023
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1 / -1
Query: 271 SI*APSLPWQXXXXXXXXXRVFAQRTPEGFSSQ 173
SI PS WQ + F Q+ GFS Q
Sbjct: 62969 SISVPSQLWQFERKRSRHLQAFVQQIQAGFSVQ 62871
>gb|AACV01012825.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012825, whole
genome shotgun sequence
Length = 24986
Score = 68.4 bits (143), Expect(4) = 3e-031
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1 / -1
Query: 97 GCEVYNLGTGKGTSVLEMVAAFEKASGK 180
GCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 18203 GCEVYNLGTGKGTSVLEMVAAFEKASGK 18120
Score = 64.8 bits (135), Expect(4) = 8e-023
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3 / +1
Query: 179 FPEAFSNAATISNTDVPFPVPKLYTSQP 96
FPEAFSNAATIS+TDVPFPVP+LYTS P
Sbjct: 18121 FPEAFSNAATISSTDVPFPVPRLYTSHP 18204
Score = 62.0 bits (129), Expect(4) = 3e-031
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 280 YGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRDLWNWASKNPYGY
Sbjct: 17795 YGVEEMCRDLWNWASKNPYGY 17733
Score = 49.2 bits (101), Expect(4) = 8e-023
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -3 / +1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPY 279
LL YP GFLLAQFHRSLHISS PY
Sbjct: 17713 LLLSGDPYP*GFLLAQFHRSLHISSTPY 17796
Score = 35.0 bits (70), Expect(4) = 3e-031
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / -3
Query: 55 IAALRKLYEDSDKIG 99
IAALRKLYEDSD+IG
Sbjct: 18348 IAALRKLYEDSDRIG 18304
Score = 29.0 bits (57), Expect(4) = 3e-031
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2 / -2
Query: 173 LGRKSLWCSLGEDPETQRSSTPQLPRQRRSSNG 271
L RKS L E E RS T +LP+ RR+ NG
Sbjct: 18004 LNRKSRLYLLDEGLEMPRSFTLKLPKLRRN*NG 17906
Score = 28.1 bits (55), Expect(4) = 8e-023
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3 / +2
Query: 98 PILSESS*SFLRAA 57
PILSESS*SFL AA
Sbjct: 18305 PILSESS*SFLNAA 18346
Score = 23.5 bits (45), Expect(4) = 8e-023
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1 / +2
Query: 271 SI*APSLPWQXXXXXXXXXRVFAQRTPEGFSSQ 173
SI PS WQ + F Q+ GFS Q
Sbjct: 17906 SISVPSQLWQFERKRSRHLQAFVQQIQAGFSVQ 18004
>gb|CF309247.1|CF309247 ABF--03-F21.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-F21, mRNA sequence
Length = 641
Score = 138 bits (296), Expect = 6e-031
Identities = 56/72 (77%), Positives = 57/72 (79%)
Frame = +1 / -1
Query: 127 KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRD 306
KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMCRD
Sbjct: 641 KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRD 462
Query: 307 LWNWASKNPYGY 342
LWNWASKNPYGY
Sbjct: 461 LWNWASKNPYGY 426
Score = 116 bits (248), Expect = 3e-024
Identities = 54/78 (69%), Positives = 55/78 (70%)
Frame = -3 / +1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 406 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 585
Query: 182 FFPEAFSNAATISNTDVP 129
FFPEAFSNAATIS+TDVP
Sbjct: 586 FFPEAFSNAATISSTDVP 639
>gb|CF312561.1|CF312561 ABF--08-F24.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--08-F24, mRNA sequence
Length = 557
Score = 138 bits (296), Expect = 6e-031
Identities = 56/72 (77%), Positives = 57/72 (79%)
Frame = +1 / -3
Query: 127 KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRD 306
KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMCRD
Sbjct: 555 KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRD 376
Query: 307 LWNWASKNPYGY 342
LWNWASKNPYGY
Sbjct: 375 LWNWASKNPYGY 340
Score = 119 bits (254), Expect = 4e-025
Identities = 55/79 (69%), Positives = 56/79 (70%)
Frame = -3 / +2
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 320 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 499
Query: 182 FFPEAFSNAATISNTDVPF 126
FFPEAFSNAATIS+TDVPF
Sbjct: 500 FFPEAFSNAATISSTDVPF 556
>gb|CF320798.1|CF320798 HD--11-N03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-N03, mRNA sequence
Length = 560
Score = 138 bits (296), Expect = 6e-031
Identities = 56/72 (77%), Positives = 57/72 (79%)
Frame = +1 / -1
Query: 127 KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRD 306
KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMCRD
Sbjct: 560 KGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRD 381
Query: 307 LWNWASKNPYGY 342
LWNWASKNPYGY
Sbjct: 380 LWNWASKNPYGY 345
Score = 116 bits (248), Expect = 3e-024
Identities = 54/78 (69%), Positives = 55/78 (70%)
Frame = -3 / +1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 325 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 504
Query: 182 FFPEAFSNAATISNTDVP 129
FFPEAFSNAATIS+TDVP
Sbjct: 505 FFPEAFSNAATISSTDVP 558
>gb|CF314144.1|CF314144 HD--02-I24.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-I24, mRNA sequence
Length = 645
Score = 134 bits (287), Expect = 1e-029
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +1 / -3
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY 234
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEK SGKKIPLVFAGRRP DAEIVY
Sbjct: 325 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKESGKKIPLVFAGRRPEDAEIVY 146
Score = 116 bits (249), Expect = 2e-024
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = -3 / +3
Query: 230 TISASPGLRPANTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
TISAS GLRPANT GIFFP++FSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 150 TISASSGLRPANTSGIFFPDSFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 323
>gb|CB669623.1|CB669623 OSJNEe02D23.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02D23 3', mRNA sequence
Length = 822
Score = 131 bits (281), Expect = 7e-029
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = +1 / -3
Query: 109 YNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGI 288
YNLGTGKGTSVLE+V AFEKASGKKIPL+ RRPGDAEI++ +GI
Sbjct: 817 YNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGI 638
Query: 289 EEMCRDLWNWASKNPYGY 342
+EMCRD WNWASKNPYGY
Sbjct: 637 DEMCRDQWNWASKNPYGY 584
Score = 105 bits (223), Expect = 7e-021
Identities = 48/90 (53%), Positives = 53/90 (58%)
Frame = -3 / +3
Query: 377 WVVHLLLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPA 198
W L+ YP GFLLAQFH SLHISS+P ISASPG
Sbjct: 549 WCPFCLVESSDPYP*GFLLAQFH*SLHISSMPNFAFQLSSFSALAGNENRISASPGRLGP 728
Query: 197 NTRGIFFPEAFSNAATISNTDVPFPVPKLY 108
RGIFFPEAFSNA TIS+T+VP PVP+LY
Sbjct: 729 IIRGIFFPEAFSNALTISSTEVPLPVPRLY 818
>gb|CF309927.1|CF309927 ABF--04-F05.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-F05, mRNA sequence
Length = 541
Score = 129 bits (276), Expect(2) = 2e-028
Identities = 52/68 (76%), Positives = 53/68 (77%)
Frame = +1 / -1
Query: 139 VLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRDLWNW 318
VLEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMCRDLWNW
Sbjct: 541 VLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNW 362
Query: 319 ASKNPYGY 342
ASKNPYGY
Sbjct: 361 ASKNPYGY 338
Score = 106 bits (226), Expect(2) = 1e-022
Identities = 50/74 (67%), Positives = 51/74 (68%)
Frame = -3 / +3
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 318 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 497
Query: 182 FFPEAFSNAATISN 141
FFPEAFSNAATIS+
Sbjct: 498 FFPEAFSNAATISS 539
Score = 24.0 bits (46), Expect(2) = 1e-022
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1 / +1
Query: 406 CSYCRMGCMDGWFICCC 356
C Y R+G + W C C
Sbjct: 277 CCYWRIGRLFSWISCYC 327
Score = 21.7 bits (41), Expect(2) = 2e-028
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -3
Query: 345 WVTRQQQMNHPSMHPILQ*EQ 407
W+ Q Q+ PILQ*+Q
Sbjct: 338 WIAGQ*QLIQLKRRPILQ*QQ 276
>gb|CF310802.1|CF310802 ABF--05-K18.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-K18, mRNA sequence
Length = 631
Score = 127 bits (272), Expect = 1e-027
Identities = 51/67 (76%), Positives = 52/67 (77%)
Frame = +1 / -3
Query: 142 LEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRDLWNWA 321
LEMVAAFEKASGKKIPLVFAGRRPGDAEIVY YG+EEMCRDLWNWA
Sbjct: 629 LEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNWA 450
Query: 322 SKNPYGY 342
SKNPYGY
Sbjct: 449 SKNPYGY 429
Score = 106 bits (226), Expect = 3e-021
Identities = 50/74 (67%), Positives = 51/74 (68%)
Frame = -3 / +1
Query: 362 LLSRDPAYPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGI 183
LL YP GFLLAQFHRSLHISS PY *TISASPGLRPANT GI
Sbjct: 409 LLLSGDPYP*GFLLAQFHRSLHISSTPYFAFHFSSFSALAV*A*TISASPGLRPANTSGI 588
Query: 182 FFPEAFSNAATISN 141
FFPEAFSNAATIS+
Sbjct: 589 FFPEAFSNAATISS 630
>gb|CF292804.1|CF292804 30DGS--01-M06.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--01-M06, mRNA sequence
Length = 544
Score = 126 bits (270), Expect = 2e-027
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1 / +2
Query: 55 IAALRKLYEDSDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPG 216
IAALRKLYEDSD+IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPG
Sbjct: 320 IAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPG 481
Score = 113 bits (242), Expect = 2e-023
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = -3 / -2
Query: 215 PGLRPANTRGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS*SFLRAA 57
PGLRPANT GIFFPEAFSNAATIS+TDVPFPVP+LYTS PILSESS*SFL AA
Sbjct: 480 PGLRPANTSGIFFPEAFSNAATISSTDVPFPVPRLYTSHPILSESS*SFLNAA 322
>gb|AU096552.1|AU096552 AU096552 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14196, mRNA sequence
Length = 587
Score = 126 bits (269), Expect = 3e-027
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +1 / +1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GT+VLE+V AFE+ASGKKIP+ RRPGD VY
Sbjct: 100 IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWS 279
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNS 363
+GIE+MCRD WNWA KNPYGY+ + + +
Sbjct: 280 ARFGIEDMCRDQWNWAKKNPYGYSANAEQN 369
>gb|CB665376.1|CB665376 OSJNEd11L17.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11L17 3', mRNA sequence
Length = 764
Score = 126 bits (269), Expect = 3e-027
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +1 / -1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GT+VLE+V AFE+ASGKKIP+ RRPGD VY
Sbjct: 479 IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWS 300
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNS 363
+GIE+MCRD WNWA KNPYGY+ + + +
Sbjct: 299 ARFGIEDMCRDQWNWAKKNPYGYSANAEQN 210
>gb|CF324844.1|CF324844 JMT1--01-K01.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--01-K01, mRNA sequence
Length = 501
Score = 126 bits (269), Expect = 3e-027
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +1 / -3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GT+VLE+V AFE+ASGKKIP+ RRPGD VY
Sbjct: 499 IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWS 320
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNS 363
+GIE+MCRD WNWA KNPYGY+ + + +
Sbjct: 319 ARFGIEDMCRDQWNWAKKNPYGYSANAEQN 230
>dbj|AB097460.1| Oryza sativa (japonica cultivar-group) OsUGE-3 mRNA for putative
UDP-glucose 4-epimerase, complete cds
Length = 1223
Score = 126 bits (269), Expect = 3e-027
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +1 / +2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GT+VLE+V AFE+ASGKKIP+ RRPGD VY
Sbjct: 875 IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWS 1054
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNS 363
+GIE+MCRD WNWA KNPYGY+ + + +
Sbjct: 1055 ARFGIEDMCRDQWNWAKKNPYGYSANAEQN 1144
>dbj|AK073610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033049I18, full
insert sequence
Length = 1425
Score = 126 bits (269), Expect = 3e-027
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +1 / +2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GT+VLE+V AFE+ASGKKIP+ RRPGD VY
Sbjct: 947 IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWS 1126
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNS 363
+GIE+MCRD WNWA KNPYGY+ + + +
Sbjct: 1127 ARFGIEDMCRDQWNWAKKNPYGYSANAEQN 1216
>dbj|AK104977.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A06, full
insert sequence
Length = 1375
Score = 126 bits (269), Expect = 3e-027
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +1 / +3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GT+VLE+V AFE+ASGKKIP+ RRPGD VY
Sbjct: 891 IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWS 1070
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNS 363
+GIE+MCRD WNWA KNPYGY+ + + +
Sbjct: 1071 ARFGIEDMCRDQWNWAKKNPYGYSANAEQN 1160
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,335,435,619
Number of Sequences: 438736
Number of extensions: 69447935
Number of successful extensions: 535655
Number of sequences better than 1.0e-020: 66
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 154289939770
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)