TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829406.2.1
(673 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA756111.1|CA756111 BR030035000_PLATE_C06_43_040.ab1 OA ... 199 2e-049
dbj|AK110485.1| Oryza sativa (japonica cultivar-group) cDNA... 199 2e-049
ref|XM_472424.1| Oryza sativa (japonica cultivar-group), p... 198 7e-049
emb|AL606451.1|OSJN00006 Oryza sativa (japonica cultivar-gr... 185 5e-045
gb|AACV01009713.1| Oryza sativa (japonica cultivar-group) c... 185 5e-045
ref|NT_107198.1| Oryza sativa (japonica cultivar-group) 185 5e-045
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 185 5e-045
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 185 5e-045
emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromoso... 185 5e-045
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 185 5e-045
gb|AU165717.1|AU165717 AU165717 Rice panicle at flowering s... 112 1e-031
gb|AU183327.1|AU183327 AU183327 Rice cDNA from immature lea... 112 1e-031
ref|XM_475631.1| Oryza sativa (japonica cultivar-group), p... 111 2e-031
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 97 4e-028
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 97 4e-028
gb|AC119288.4| Oryza sativa (japonica cultivar-group) chrom... 97 4e-028
gb|AC137614.2| Oryza sativa (japonica cultivar-group) chrom... 97 4e-028
gb|AC104276.2| Oryza sativa (japonica cultivar-group) chrom... 97 4e-028
gb|AACV01010931.1| Oryza sativa (japonica cultivar-group) c... 97 4e-028
gb|AU182519.1|AU182519 AU182519 Rice panicle at flowering s... 112 4e-027
gb|AU184299.1|AU184299 AU184299 Rice root Oryza sativa (jap... 112 4e-027
gb|AU184331.1|AU184331 AU184331 Rice root Oryza sativa (jap... 112 4e-027
gb|CV721477.1|CV721477 YBH--04-E01.b1 Rice before heading y... 112 5e-027
gb|CV721494.1|CV721494 YBH--04-F01.b1 Rice before heading y... 112 5e-027
dbj|AK105208.1| Oryza sativa (japonica cultivar-group) cDNA... 98 5e-026
dbj|AK062916.1| Oryza sativa (japonica cultivar-group) cDNA... 98 5e-026
gb|AU184419.1|AU184419 AU184419 Rice root Oryza sativa (jap... 112 3e-025
gb|AU182670.1|AU182670 AU182670 Rice panicle (longer than 1... 110 1e-024
gb|CV721235.1|CV721235 YBH--03-G09.b1 Rice before heading y... 98 1e-024
gb|CV721634.1|CV721634 YBH--04-M15.b1 Rice before heading y... 98 1e-024
ref|XM_472425.1| Oryza sativa (japonica cultivar-group), p... 98 1e-024
gb|CV720933.1|CV720933 YBH--02-F09.b1 Rice before heading y... 74 7e-024
gb|AU183328.1|AU183328 AU183328 Rice cDNA from immature lea... 107 1e-023
gb|CV721396.1|CV721396 YBH--03-P10.b1 Rice before heading y... 71 5e-023
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 84 3e-022
dbj|AP004127.1| Oryza sativa (japonica cultivar-group) geno... 84 4e-022
>gb|CA756111.1|CA756111 BR030035000_PLATE_C06_43_040.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030035000_PLATE_C06_43_040.ab1 similar to NP_568160.1|
(NM_120678) putative protein [Arabidopsis thaliana]
gi|21592534|gb|AAM64483.1| (AY086919) unknown
[Arabidopsis thaliana], mRNA sequence
Length = 628
Score = 199 bits (430), Expect = 2e-049
Identities = 85/111 (76%), Positives = 87/111 (78%)
Frame = +2 / -2
Query: 296 AHGRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQ 475
AHGRV*SPHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ
Sbjct: 441 AHGRV*SPHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQ 262
Query: 476 QPLDGAELGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
PLDG +LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 261 HPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 109
Score = 179 bits (385), Expect = 3e-043
Identities = 71/97 (73%), Positives = 78/97 (80%)
Frame = -2 / +2
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 158 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 337
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
+GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP*A +
Sbjct: 338 NAGIKPEVAITIPKRCNIADRPVGYKCGDYTLP*ATK 448
Score = 67.0 bits (140), Expect(3) = 4e-022
Identities = 26/36 (72%), Positives = 26/36 (72%)
Frame = +3 / -3
Query: 297 LMAECNLRTCSXXXXXXXCSAWGW*WPPRA*SRTSW 404
LMAECNLRTCS CSAWGW*W PRA*S SW
Sbjct: 440 LMAECNLRTCSRRGGRRCCSAWGW*WRPRA*SPRSW 333
Score = 44.6 bits (91), Expect(3) = 4e-022
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / -1
Query: 415 QHDGAEALGALLPDGVH 465
QHDGAEALGALLPDGVH
Sbjct: 322 QHDGAEALGALLPDGVH 272
Score = 34.5 bits (69), Expect(3) = 4e-022
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 459 CAPPCSSRWTAPSWG 503
CAPPCS+R TA +WG
Sbjct: 278 CAPPCSTRSTASTWG 234
>dbj|AK110485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-B02, full
insert sequence
Length = 3096
Score = 199 bits (430), Expect = 2e-049
Identities = 85/111 (76%), Positives = 87/111 (78%)
Frame = +2 / -2
Query: 296 AHGRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQ 475
AHGRV*SPHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ
Sbjct: 2801 AHGRV*SPHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQ 2622
Query: 476 QPLDGAELGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
PLDG +LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 2621 HPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 2469
Score = 179 bits (385), Expect = 3e-043
Identities = 71/97 (73%), Positives = 78/97 (80%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 2518 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 2697
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
+GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP*A +
Sbjct: 2698 NAGIKPEVAITIPKRCNIADRPVGYKCGDYTLP*ATK 2808
Score = 70.3 bits (147), Expect(3) = 2e-022
Identities = 27/36 (75%), Positives = 27/36 (75%)
Frame = +3 / -3
Query: 297 LMAECNLRTCSXXXXXXXCSAWGW*WPPRA*SRTSW 404
LMAECNLRTCS CSAWGW*W PRA*SR SW
Sbjct: 2800 LMAECNLRTCSRRGGRRCCSAWGW*WRPRA*SRRSW 2693
Score = 42.3 bits (86), Expect(3) = 2e-022
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1 / -1
Query: 415 QHDGAEALGALLPDGVH 465
QHDGAEALGALLP+GVH
Sbjct: 2682 QHDGAEALGALLPNGVH 2632
Score = 34.5 bits (69), Expect(3) = 2e-022
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 459 CAPPCSSRWTAPSWG 503
CAPPCS+R TA +WG
Sbjct: 2638 CAPPCSTRSTASTWG 2594
>ref|XM_472424.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 351
Score = 198 bits (426), Expect = 7e-049
Identities = 84/110 (76%), Positives = 86/110 (78%)
Frame = +2 / -2
Query: 299 HGRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQ 478
HGRV*SPHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ
Sbjct: 350 HGRV*SPHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQH 171
Query: 479 PLDGAELGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
PLDG +LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 170 PLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 21
Score = 176 bits (379), Expect = 2e-042
Identities = 70/94 (74%), Positives = 76/94 (80%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 70 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 249
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
+GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP*
Sbjct: 250 NAGIKPEVAITIPKRCNIADRPVGYKCGDYTLP* 351
Score = 68.4 bits (143), Expect(3) = 9e-023
Identities = 26/35 (74%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 300 MAECNLRTCSXXXXXXXCSAWGW*WPPRA*SRTSW 404
MAECNLRTCS CSAWGW*W PRA*SR SW
Sbjct: 349 MAECNLRTCSRRGGRRCCSAWGW*WRPRA*SRRSW 245
Score = 44.6 bits (91), Expect(3) = 9e-023
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / -1
Query: 415 QHDGAEALGALLPDGVH 465
QHDGAEALGALLPDGVH
Sbjct: 234 QHDGAEALGALLPDGVH 184
Score = 34.5 bits (69), Expect(3) = 9e-023
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 459 CAPPCSSRWTAPSWG 503
CAPPCS+R TA +WG
Sbjct: 190 CAPPCSTRSTASTWG 146
>emb|AL606451.1|OSJN00006 Oryza sativa (japonica cultivar-group) chromosome 4 clone OJ1217_H10,
*** SEQUENCING IN PROGRESS ***
Length = 84487
Score = 185 bits (398), Expect = 5e-045
Identities = 78/104 (75%), Positives = 80/104 (76%)
Frame = +2 / -2
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQPLDGAE 496
PHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ PLDG +
Sbjct: 83496 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQHPLDGVD 83317
Query: 497 LGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 83316 LGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 83185
Score = 162 bits (349), Expect = 3e-038
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = -2 / +2
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 83234 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 83413
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCG 316
+GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 83414 NAGIKPEVAITIPKRCNIADRPVGYKCG 83497
>gb|AACV01009713.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009713, whole
genome shotgun sequence
Length = 19998
Score = 185 bits (398), Expect = 5e-045
Identities = 78/104 (75%), Positives = 80/104 (76%)
Frame = +2 / -1
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQPLDGAE 496
PHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ PLDG +
Sbjct: 3972 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQHPLDGVD 3793
Query: 497 LGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 3792 LGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 3661
Score = 162 bits (349), Expect = 3e-038
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = -2 / +2
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 3710 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 3889
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCG 316
+GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 3890 NAGIKPEVAITIPKRCNIADRPVGYKCG 3973
Score = 71.2 bits (149), Expect(2) = 4e-023
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +2 / -1
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 7680 PHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 7561
Score = 60.6 bits (126), Expect(2) = 4e-023
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -1
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 7557 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 7417
>ref|NT_107198.1| Oryza sativa (japonica cultivar-group)
Length = 632744
Score = 185 bits (398), Expect = 5e-045
Identities = 78/104 (75%), Positives = 80/104 (76%)
Frame = +2 / -1
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQPLDGAE 496
PHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ PLDG +
Sbjct: 283502 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQHPLDGVD 283323
Query: 497 LGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 283322 LGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 283191
Score = 162 bits (349), Expect = 3e-038
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 283240 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 283419
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCG 316
+GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 283420 NAGIKPEVAITIPKRCNIADRPVGYKCG 283503
Score = 71.2 bits (149), Expect(2) = 4e-023
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +2 / -3
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 287211 PHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 287092
Score = 60.6 bits (126), Expect(2) = 4e-023
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -3
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 287088 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 286948
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 185 bits (398), Expect = 5e-045
Identities = 78/104 (75%), Positives = 80/104 (76%)
Frame = +2 / -3
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQPLDGAE 496
PHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ PLDG +
Sbjct: 10341458 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQHPLDGVD 10341279
Query: 497 LGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 10341278 LGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 10341147
Score = 162 bits (349), Expect = 3e-038
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 10341196 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 10341375
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCG 316
+GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 10341376 NAGIKPEVAITIPKRCNIADRPVGYKCG 10341459
Score = 71.2 bits (149), Expect(2) = 4e-023
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +2 / -3
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 10345166 PHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 10345047
Score = 60.6 bits (126), Expect(2) = 4e-023
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -3
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 10345043 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 10344903
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 185 bits (398), Expect = 5e-045
Identities = 78/104 (75%), Positives = 80/104 (76%)
Frame = +2 / -1
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQPLDGAE 496
PHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ PLDG +
Sbjct: 17688820 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQHPLDGVD 17688641
Query: 497 LGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 17688640 LGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 17688509
Score = 162 bits (349), Expect = 3e-038
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = -2 / +3
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 17688558 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 17688737
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCG 316
+GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 17688738 NAGIKPEVAITIPKRCNIADRPVGYKCG 17688821
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
complete sequence
Length = 116952
Score = 185 bits (398), Expect = 5e-045
Identities = 78/104 (75%), Positives = 80/104 (76%)
Frame = +2 / -2
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQPLDGAE 496
PHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ PLDG +
Sbjct: 63497 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQHPLDGVD 63318
Query: 497 LGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 63317 LGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 63186
Score = 162 bits (349), Expect = 3e-038
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 63235 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 63414
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCG 316
+GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 63415 NAGIKPEVAITIPKRCNIADRPVGYKCG 63498
Score = 71.2 bits (149), Expect(2) = 4e-023
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +2 / -1
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 67206 PHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 67087
Score = 60.6 bits (126), Expect(2) = 4e-023
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -1
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 67083 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 66943
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 185 bits (398), Expect = 5e-045
Identities = 78/104 (75%), Positives = 80/104 (76%)
Frame = +2 / -3
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLCFPMVCTAVQQPLDGAE 496
PHL*PTGRS LQRLGMVMATSGLIP FL VLDSMTAQRH GLCFPMVCTAVQ PLDG +
Sbjct: 20552869 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLCFPMVCTAVQHPLDGVD 20552690
Query: 497 LGFCAADAHGASFSAILSGGVAPHSPAPXXXXXXXXXXXXXXXS 628
LG AADAHGASFSAILSGGVAPHSPAP +
Sbjct: 20552689 LGSLAADAHGASFSAILSGGVAPHSPAPSAAAAATTTSASTTTT 20552558
Score = 162 bits (349), Expect = 3e-038
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = -2 / +3
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGKQSPQCLCAVMLSKTAK 400
GAGECGATPPD+MALKL S+GCCTAVHTIGKQSP+CLCAVMLS T +
Sbjct: 20552607 GAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTR 20552786
Query: 399 KSGIKPEVAITIPKRCNLVDRPVGYKCG 316
+GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 20552787 NAGIKPEVAITIPKRCNIADRPVGYKCG 20552870
>gb|AU165717.1|AU165717 AU165717 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4182, mRNA sequence
Length = 676
Score = 112 bits (239), Expect(2) = 1e-031
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 289 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 447
Score = 88.1 bits (186), Expect(2) = 5e-030
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +2 / -3
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
G V*SPHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 434 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 288
Score = 67.0 bits (140), Expect(2) = 5e-030
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / -3
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 287 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 159
Score = 48.3 bits (99), Expect(2) = 1e-031
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 160 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 291
>gb|AU183327.1|AU183327 AU183327 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61684, mRNA sequence
Length = 444
Score = 112 bits (239), Expect(2) = 1e-031
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 269 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 427
Score = 88.1 bits (186), Expect(2) = 5e-030
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +2 / -1
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
G V*SPHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 414 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 268
Score = 67.0 bits (140), Expect(2) = 5e-030
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / -1
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 267 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 139
Score = 48.3 bits (99), Expect(2) = 1e-031
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / +2
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 140 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 271
>ref|XM_475631.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 354
Score = 111 bits (236), Expect(2) = 2e-031
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP* 298
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP*
Sbjct: 205 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 354
Score = 88.1 bits (186), Expect(3) = 1e-030
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +2 / -2
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
G V*SPHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 350 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 204
Score = 67.0 bits (140), Expect(3) = 1e-030
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / -2
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 203 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 75
Score = 48.3 bits (99), Expect(2) = 2e-031
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 76 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 207
Score = 18.9 bits (35), Expect(3) = 1e-030
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1 / -1
Query: 448 LPDGVH 465
LPDGVH
Sbjct: 207 LPDGVH 190
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 97.3 bits (206), Expect(2) = 3e-027
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2 / -3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 3491629 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCG 3491498
Score = 81.7 bits (172), Expect(2) = 4e-028
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2 / +3
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
PHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 3491499 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 3491630
Score = 67.0 bits (140), Expect(2) = 4e-028
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / +3
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 3491631 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 3491759
Score = 48.3 bits (99), Expect(2) = 3e-027
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / -3
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 3491758 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 3491627
>ref|NT_107216.1| Oryza sativa (japonica cultivar-group)
Length = 2910826
Score = 97.3 bits (206), Expect(2) = 3e-027
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2 / -2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 2570655 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCG 2570524
Score = 81.7 bits (172), Expect(2) = 4e-028
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2 / +2
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
PHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 2570525 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 2570656
Score = 67.0 bits (140), Expect(2) = 4e-028
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / +2
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 2570657 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 2570785
Score = 48.3 bits (99), Expect(2) = 3e-027
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / -2
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 2570784 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 2570653
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22,
complete sequence
Length = 177153
Score = 97.3 bits (206), Expect(2) = 3e-027
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2 / -3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 109750 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCG 109619
Score = 81.7 bits (172), Expect(2) = 4e-028
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2 / +3
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
PHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 109620 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 109751
Score = 67.0 bits (140), Expect(2) = 4e-028
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / +3
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 109752 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 109880
Score = 48.3 bits (99), Expect(2) = 3e-027
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / -3
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 109879 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 109748
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0034O12, complete sequence
Length = 156263
Score = 97.3 bits (206), Expect(2) = 3e-027
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2 / -1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 45899 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCG 45768
Score = 81.7 bits (172), Expect(2) = 4e-028
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2 / +1
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
PHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 45769 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 45900
Score = 67.0 bits (140), Expect(2) = 4e-028
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / +1
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 45901 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 46029
Score = 48.3 bits (99), Expect(2) = 3e-027
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / -1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 46028 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 45897
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08,
complete sequence
Length = 118049
Score = 97.3 bits (206), Expect(2) = 3e-027
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2 / -3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 47550 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCG 47419
Score = 81.7 bits (172), Expect(2) = 4e-028
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2 / +2
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
PHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 47420 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 47551
Score = 67.0 bits (140), Expect(2) = 4e-028
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / +2
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 47552 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 47680
Score = 48.3 bits (99), Expect(2) = 3e-027
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / -3
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 47679 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 47548
>gb|AACV01010931.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010931, whole
genome shotgun sequence
Length = 25588
Score = 97.3 bits (206), Expect(2) = 4e-027
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCG
Sbjct: 4687 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCG 4818
Score = 81.7 bits (172), Expect(2) = 4e-028
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2 / -3
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
PHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 4817 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 4686
Score = 67.0 bits (140), Expect(2) = 4e-028
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +2 / -3
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PMVCTA QQ LDGA+ G AAD HGAS SA S PHSPAP
Sbjct: 4685 PMVCTAEQQLLDGADCGSSAADTHGASRSATRSADALPHSPAP 4557
Score = 48.3 bits (99), Expect(2) = 4e-027
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -2 / +1
Query: 579 GAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
GAGECG DR+AL+L S+ CC+AVHTIG+
Sbjct: 4558 GAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ 4689
>gb|AU182519.1|AU182519 AU182519 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3418, mRNA sequence
Length = 453
Score = 112 bits (239), Expect(2) = 4e-027
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 64 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 222
Score = 33.1 bits (66), Expect(2) = 4e-027
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / +3
Query: 502 PQLGAVQRLLHGGAHHR 452
P +GAV++LL GGAHHR
Sbjct: 12 PAVGAVEQLLLGGAHHR 62
>gb|AU184299.1|AU184299 AU184299 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1885, mRNA sequence
Length = 449
Score = 112 bits (239), Expect(2) = 4e-027
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 67 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 225
Score = 33.1 bits (66), Expect(2) = 4e-027
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / +3
Query: 502 PQLGAVQRLLHGGAHHR 452
P +GAV++LL GGAHHR
Sbjct: 15 PAVGAVEQLLLGGAHHR 65
>gb|AU184331.1|AU184331 AU184331 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1979, mRNA sequence
Length = 451
Score = 112 bits (239), Expect(2) = 4e-027
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 69 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 227
Score = 88.1 bits (186), Expect(2) = 2e-021
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +2 / -1
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
G V*SPHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 214 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 68
Score = 38.2 bits (77), Expect(2) = 2e-021
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / -1
Query: 452 PMVCTAVQQPLDGAELGFCAAD 517
PMVCTA QQ LDGA+ G AAD
Sbjct: 67 PMVCTAEQQLLDGADCGSSAAD 2
Score = 33.1 bits (66), Expect(2) = 4e-027
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / +2
Query: 502 PQLGAVQRLLHGGAHHR 452
P +GAV++LL GGAHHR
Sbjct: 17 PAVGAVEQLLLGGAHHR 67
>gb|CV721477.1|CV721477 YBH--04-E01.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-E01, mRNA sequence
Length = 460
Score = 112 bits (239), Expect(2) = 5e-027
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 138 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 296
Score = 88.1 bits (186), Expect(2) = 2e-025
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +2 / -1
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
G V*SPHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 283 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 137
Score = 51.5 bits (106), Expect(2) = 2e-025
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = +2 / -1
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILS 550
PMVCTA QQ LDGA+ G AAD HGAS SA S
Sbjct: 136 PMVCTAEQQMLDGADCGSSAADTHGASRSATRS 38
Score = 32.7 bits (65), Expect(2) = 5e-027
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1 / +2
Query: 502 PQLGAVQRLLHGGAHHR 452
P +GAV+ LL GGAHHR
Sbjct: 86 PAVGAVEHLLLGGAHHR 136
>gb|CV721494.1|CV721494 YBH--04-F01.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-F01, mRNA sequence
Length = 460
Score = 112 bits (239), Expect(2) = 5e-027
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +3
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 138 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 296
Score = 88.1 bits (186), Expect(2) = 2e-025
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +2 / -1
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWGLC 448
G V*SPHL*PTGRS LQRLGMVMATSGLIP LAVLDS+TA R GLC
Sbjct: 283 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLC 137
Score = 51.5 bits (106), Expect(2) = 2e-025
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = +2 / -1
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILS 550
PMVCTA QQ LDGA+ G AAD HGAS SA S
Sbjct: 136 PMVCTAEQQMLDGADCGSSAADTHGASRSATRS 38
Score = 32.7 bits (65), Expect(2) = 5e-027
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1 / +2
Query: 502 PQLGAVQRLLHGGAHHR 452
P +GAV+ LL GGAHHR
Sbjct: 86 PAVGAVEHLLLGGAHHR 136
>dbj|AK105208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H09, full
insert sequence
Length = 702
Score = 97.7 bits (207), Expect(2) = 5e-026
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
++P+CLCAVMLS TA+ +G+KP VA+TIPKRC + +RP+GYKCG YTLP* A+
Sbjct: 283 RNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP*GAK 441
Score = 76.2 bits (160), Expect(2) = 6e-023
Identities = 34/50 (68%), Positives = 35/50 (70%)
Frame = +2 / -2
Query: 293 AAHGRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWG 442
A HGRV PHL*P GR QRLGMVMAT+GL P AV DSMTA RH G
Sbjct: 437 APHGRVYGPHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLG 288
Score = 55.1 bits (114), Expect(2) = 6e-023
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = +2 / -2
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PM+ T QQ A GFC A AHGAS SA S G PHSPAP
Sbjct: 281 PMLRTCAQQLGGTAARGFCVAAAHGASLSATWSTGTRPHSPAP 153
Score = 44.1 bits (90), Expect(2) = 5e-026
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2 / +1
Query: 582 RGAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
RGAGECG P D++ALKL CC V +IG+
Sbjct: 151 RGAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGR 285
>dbj|AK062916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H02, full
insert sequence
Length = 590
Score = 97.7 bits (207), Expect(2) = 5e-026
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
++P+CLCAVMLS TA+ +G+KP VA+TIPKRC + +RP+GYKCG YTLP* A+
Sbjct: 283 RNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP*GAK 441
Score = 76.2 bits (160), Expect(2) = 6e-023
Identities = 34/50 (68%), Positives = 35/50 (70%)
Frame = +2 / -1
Query: 293 AAHGRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRHWG 442
A HGRV PHL*P GR QRLGMVMAT+GL P AV DSMTA RH G
Sbjct: 437 APHGRVYGPHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLG 288
Score = 55.1 bits (114), Expect(2) = 6e-023
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = +2 / -1
Query: 452 PMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPAP 580
PM+ T QQ A GFC A AHGAS SA S G PHSPAP
Sbjct: 281 PMLRTCAQQLGGTAARGFCVAAAHGASLSATWSTGTRPHSPAP 153
Score = 44.1 bits (90), Expect(2) = 5e-026
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2 / +1
Query: 582 RGAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
RGAGECG P D++ALKL CC V +IG+
Sbjct: 151 RGAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGR 285
>gb|AU184419.1|AU184419 AU184419 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2228, mRNA sequence
Length = 454
Score = 112 bits (239), Expect(2) = 3e-025
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 34 QSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 192
Score = 26.7 bits (52), Expect(2) = 3e-025
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 483 NGCCTAVHTIGK 448
+ CC+AVHTIG+
Sbjct: 1 SSCCSAVHTIGQ 36
>gb|AU182670.1|AU182670 AU182670 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20278, mRNA sequence
Length = 443
Score = 110 bits (234), Expect(2) = 1e-024
Identities = 43/52 (82%), Positives = 46/52 (88%)
Frame = -2 / +2
Query: 444 SPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
SP CLCAVMLS TA+ +GIKPEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 44 SPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 199
Score = 27.2 bits (53), Expect(2) = 1e-024
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 490 AVQRLLHGGAHHR 452
AV++LL GGAHHR
Sbjct: 1 AVEQLLLGGAHHR 39
>gb|CV721235.1|CV721235 YBH--03-G09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-G09, mRNA sequence
Length = 454
Score = 97.7 bits (207), Expect(2) = 1e-021
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP 301
QS CLCAV+LS T ++SG+KPEVAITIPKRC L +RPVGYKCG YTLP
Sbjct: 269 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLP 415
Score = 76.2 bits (160), Expect(2) = 1e-024
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +2 / -2
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
G V*+PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 414 GSV*APHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 280
Score = 60.6 bits (126), Expect(2) = 1e-024
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -2
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 276 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 136
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 576 AGECGATPPDRMALKL 529
AG+CG TP +++ALKL
Sbjct: 137 AGKCGKTPAEKVALKL 184
>gb|CV721634.1|CV721634 YBH--04-M15.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-M15, mRNA sequence
Length = 450
Score = 97.7 bits (207), Expect(2) = 1e-021
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP 301
QS CLCAV+LS T ++SG+KPEVAITIPKRC L +RPVGYKCG YTLP
Sbjct: 281 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLP 427
Score = 76.2 bits (160), Expect(2) = 1e-024
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +2 / -1
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
G V*+PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 426 GSV*APHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 292
Score = 60.6 bits (126), Expect(2) = 1e-024
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -1
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 288 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 148
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 576 AGECGATPPDRMALKL 529
AG+CG TP +++ALKL
Sbjct: 149 AGKCGKTPAEKVALKL 196
>ref|XM_472425.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 372
Score = 97.7 bits (207), Expect(2) = 1e-021
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = -2 / +1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP 301
QS CLCAV+LS T ++SG+KPEVAITIPKRC L +RPVGYKCG YTLP
Sbjct: 211 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLP 357
Score = 76.2 bits (160), Expect(2) = 1e-024
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +2 / -2
Query: 302 GRV*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
G V*+PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 356 GSV*APHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 222
Score = 60.6 bits (126), Expect(2) = 1e-024
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -2
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 218 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 78
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2 / +1
Query: 576 AGECGATPPDRMALKL 529
AG+CG TP +++ALKL
Sbjct: 79 AGKCGKTPAEKVALKL 126
>gb|CV720933.1|CV720933 YBH--02-F09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--02-F09, mRNA sequence
Length = 452
Score = 73.9 bits (155), Expect(2) = 7e-024
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +2 / -3
Query: 308 V*SPHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
V*+PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 450 V*APHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 322
Score = 60.6 bits (126), Expect(2) = 7e-024
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -3
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 318 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 178
>gb|AU183328.1|AU183328 AU183328 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61684, mRNA sequence
Length = 438
Score = 107 bits (229), Expect(2) = 1e-023
Identities = 42/53 (79%), Positives = 45/53 (84%)
Frame = -2 / +2
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP*AAR 289
QSP CLC VMLS TA+ +GI PEVAITIPKRCN+ DRPVGYKCGDYTLP* R
Sbjct: 29 QSPXCLCXVMLSNTARVAGIXPEVAITIPKRCNMADRPVGYKCGDYTLP*PXR 187
Score = 26.3 bits (51), Expect(2) = 1e-023
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 477 CCTAVHTIGK 448
CC+AVHTIG+
Sbjct: 2 CCSAVHTIGQ 31
>gb|CV721396.1|CV721396 YBH--03-P10.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-P10, mRNA sequence
Length = 453
Score = 71.2 bits (149), Expect(2) = 5e-023
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +2 / -2
Query: 317 PHL*PTGRSTRLQRLGMVMATSGLIPDFLAVLDSMTAQRH 436
PHL*PTGR LQRLGMVMATSGL P+ L VLDS TA RH
Sbjct: 407 PHL*PTGRLASLQRLGMVMATSGLTPERLTVLDSSTAHRH 288
Score = 60.6 bits (126), Expect(2) = 5e-023
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2 / -2
Query: 437 WGLCFPMVCTAVQQPLDGAELGFCAADAHGASFSAILSGGVAPHSPA 577
W C PM TA Q G G CAA AHGASFSA S GV PH PA
Sbjct: 284 WLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPA 144
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 84.5 bits (178), Expect(2) = 3e-022
Identities = 29/44 (65%), Positives = 39/44 (88%)
Frame = -2 / -1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
++P+CLCAVMLS TA+ +G+KP VA+TIPKRC + +RP+GYKCG
Sbjct: 11005848 RNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCG 11005717
Score = 44.1 bits (90), Expect(2) = 3e-022
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2 / -1
Query: 582 RGAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
RGAGECG P D++ALKL CC V +IG+
Sbjct: 11005980 RGAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGR 11005846
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0005H10
Length = 142885
Score = 84.5 bits (178), Expect(2) = 4e-022
Identities = 29/44 (65%), Positives = 39/44 (88%)
Frame = -2 / -1
Query: 447 QSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCG 316
++P+CLCAVMLS TA+ +G+KP VA+TIPKRC + +RP+GYKCG
Sbjct: 129634 RNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCG 129503
Score = 44.1 bits (90), Expect(2) = 4e-022
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2 / -1
Query: 582 RGAGECGATPPDRMALKLXXXXXXXXXXXXXXSNGCCTAVHTIGK 448
RGAGECG P D++ALKL CC V +IG+
Sbjct: 129766 RGAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGR 129632
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,833,673,270
Number of Sequences: 438736
Number of extensions: 55324906
Number of successful extensions: 274890
Number of sequences better than 1.0e-020: 46
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 148844412484
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)