TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748380.2.1
(1272 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA... 369 e-111
gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-... 362 e-109
ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA 362 e-105
dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA... 207 e-103
gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS ... 335 7e-094
ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA 326 2e-091
gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-... 326 3e-091
dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA... 319 4e-085
gb|AACV01015031.1| Oryza sativa (japonica cultivar-group) c... 149 3e-078
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 149 1e-072
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 149 5e-072
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-066
ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA 240 2e-061
emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box pro... 240 2e-061
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 149 6e-061
dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA... 238 1e-060
gb|AACV01007934.1| Oryza sativa (japonica cultivar-group) c... 134 4e-059
gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 gen... 134 2e-057
gb|AF377947.3| Oryza sativa (japonica cultivar-group) chrom... 134 3e-057
gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 ... 134 5e-057
ref|NT_107186.1| Oryza sativa (japonica cultivar-group) 134 2e-056
dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA... 200 3e-049
gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-... 200 3e-049
ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA 200 3e-049
gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-... 198 1e-048
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 134 3e-048
gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-... 195 7e-048
dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA... 195 1e-047
gb|C72923.1|C72923 C72923 Rice panicle at flowering stage O... 160 1e-046
dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA... 139 1e-045
dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA... 139 2e-045
gb|CF332154.1|CF332154 NACL--08-I21.g1 Rice callus plasmid ... 138 4e-045
dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA... 185 1e-044
dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA... 123 5e-044
gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6... 123 5e-044
gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flow... 123 5e-044
gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5... 132 2e-043
dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA... 132 2e-043
ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA 132 2e-043
gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-... 140 8e-041
gb|C74564.1|C74564 C74564 Rice panicle shorter than 3cm Ory... 160 3e-039
dbj|AK070958.1| Oryza sativa (japonica cultivar-group) cDNA... 118 3e-037
gb|AY551913.1| Oryza sativa (japonica cultivar-group) MADS-... 118 3e-037
ref|XM_463559.1| Oryza sativa (japonica cultivar-group), p... 117 5e-037
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 149 6e-034
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 149 6e-034
gb|CF315263.1|CF315263 HD--04-B23.b1 OsHDAC1-overexpressing... 129 3e-033
emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein 141 4e-033
gb|AY250075.1| Oryza sativa (japonica cultivar-group) MADS2... 110 8e-033
gb|AY177696.1| Oryza sativa (japonica cultivar-group) trans... 101 8e-033
gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) ... 140 1e-032
dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA... 140 1e-032
ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA 140 1e-032
gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS ... 138 4e-032
gb|AACV01016746.1| Oryza sativa (japonica cultivar-group) c... 127 4e-031
gb|AY177702.1| Oryza sativa (japonica cultivar-group) trans... 103 7e-031
ref|XM_467621.1| Oryza sativa (japonica cultivar-group), mRNA 103 7e-031
gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8... 139 7e-031
dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA... 139 7e-031
gb|AY224482.1| Oryza sativa (japonica cultivar-group) isola... 102 2e-030
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 127 6e-030
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 134 2e-029
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 134 2e-029
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 134 2e-029
gb|C75937.1|C75937 C75937 Rice callus Oryza sativa (japonic... 134 2e-029
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 127 2e-027
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 127 2e-027
dbj|AP004178.3| Oryza sativa (japonica cultivar-group) geno... 123 3e-027
gb|AACV01018907.1| Oryza sativa (japonica cultivar-group) c... 122 6e-027
gb|CB655394.1|CB655394 OSJNEc08M08.r OSJNEc Oryza sativa (j... 126 7e-027
gb|CB658195.1|CB658195 OSJNEc14A21.f OSJNEc Oryza sativa (j... 126 7e-027
gb|CB659436.1|CB659436 OSJNEc16G22.f OSJNEc Oryza sativa (j... 126 7e-027
gb|CF332627.1|CF332627 JMT--01-D10.b1 AtJMT-overexpressing ... 126 7e-027
gb|CF334759.1|CF334759 JMT--04-C18.b1 AtJMT-overexpressing ... 126 7e-027
dbj|AK070135.1| Oryza sativa (japonica cultivar-group) cDNA... 126 7e-027
gb|AY345224.1| Oryza sativa (japonica cultivar-group) trans... 126 7e-027
gb|AY551919.1| Oryza sativa (japonica cultivar-group) MADS-... 126 7e-027
ref|NM_197541.1| Oryza sativa (japonica cultivar-group) put... 126 7e-027
gb|AU225854.1|AU225854 AU225854 Oryza sativa Koshihikari pi... 119 2e-026
gb|D22380.1|D22380 RICC10934A Rice callus Oryza sativa (jap... 123 3e-026
gb|AC105732.3| Oryza sativa (japonica cultivar-group) chrom... 123 3e-026
gb|AC135158.2| Oryza sativa (japonica cultivar-group) chrom... 123 3e-026
gb|AACV01005162.1| Oryza sativa (japonica cultivar-group) c... 123 3e-026
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 123 3e-026
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 123 3e-026
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 123 3e-026
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 123 3e-026
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 123 3e-026
gb|AACV01006102.1| Oryza sativa (japonica cultivar-group) c... 123 3e-026
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 123 3e-026
gb|AU068508.1|AU068508 AU068508 Rice callus Oryza sativa (j... 123 5e-026
dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA... 122 9e-026
gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-... 122 9e-026
gb|AACV01010373.1| Oryza sativa (japonica cultivar-group) c... 122 9e-026
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 122 9e-026
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 122 9e-026
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 122 9e-026
emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromoso... 122 9e-026
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 122 9e-026
gb|AY551924.1| Oryza sativa (japonica cultivar-group) MADS-... 111 1e-025
dbj|AK070894.1| Oryza sativa (japonica cultivar-group) cDNA... 111 1e-025
ref|XM_463532.1| Oryza sativa (japonica cultivar-group), p... 111 1e-025
gb|AQ578837.1|AQ578837 nbxb0093F09f CUGI Rice BAC Library O... 122 1e-025
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 122 1e-025
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 122 1e-025
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 122 1e-025
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 122 1e-025
dbj|AP005529.3| Oryza sativa (japonica cultivar-group) geno... 122 1e-025
gb|AACV01020364.1| Oryza sativa (japonica cultivar-group) c... 121 2e-025
gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromo... 121 2e-025
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 121 2e-025
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 121 2e-025
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 121 2e-025
gb|AU225127.1|AU225127 AU225127 Oryza sativa Koshihikari pi... 121 2e-025
gb|CF297258.1|CF297258 30DGS--07-P17.b1 Rice leaf plasmid c... 121 2e-025
dbj|AB003328.1| Oryza sativa (japonica cultivar-group) mRNA... 121 2e-025
dbj|AK067641.1| Oryza sativa (japonica cultivar-group) cDNA... 121 2e-025
dbj|AK104921.1| Oryza sativa (japonica cultivar-group) cDNA... 121 2e-025
gb|AY551912.1| Oryza sativa (japonica cultivar-group) MADS-... 121 2e-025
ref|XM_473638.1| Oryza sativa (japonica cultivar-group), p... 121 2e-025
dbj|AK070425.1| Oryza sativa (japonica cultivar-group) cDNA... 120 3e-025
gb|AY332475.1| Oryza sativa (japonica cultivar-group) MADS ... 120 4e-025
dbj|AK108568.1| Oryza sativa (japonica cultivar-group) cDNA... 119 6e-025
gb|AC098695.2| Oryza sativa (japonica cultivar-group) chrom... 119 6e-025
gb|AY551915.1| Oryza sativa (japonica cultivar-group) MADS-... 119 6e-025
gb|AY553724.1| Oryza sativa (japonica cultivar-group) MADS-... 119 6e-025
gb|AACV01005781.1| Oryza sativa (japonica cultivar-group) c... 119 6e-025
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 119 6e-025
gb|AQ330858.1|AQ330858 nbxb0048E10f CUGI Rice BAC Library O... 119 8e-025
gb|AACV01013077.1| Oryza sativa (japonica cultivar-group) c... 119 8e-025
dbj|AB026295.2| Oryza sativa (japonica cultivar-group) geno... 119 8e-025
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 119 8e-025
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 119 8e-025
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 119 8e-025
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 119 8e-025
gb|CF294135.1|CF294135 30DGS--03-I23.g1 Rice leaf plasmid c... 118 1e-024
gb|CA755986.1|CA755986 BR030032000_PLATE_E04_29_033.ab1 OA ... 101 1e-024
gb|AACV01000383.1| Oryza sativa (japonica cultivar-group) c... 117 2e-024
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 117 2e-024
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 117 2e-024
dbj|AP003105.2| Oryza sativa (japonica cultivar-group) geno... 117 2e-024
dbj|AP003197.4| Oryza sativa (japonica cultivar-group) geno... 117 2e-024
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 117 2e-024
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 117 2e-024
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 117 2e-024
ref|NM_188300.1| Oryza sativa (japonica cultivar-group), p... 117 3e-024
gb|AQ271415.1|AQ271415 nbxb0025B08f CUGI Rice BAC Library O... 116 4e-024
gb|AQ575051.1|AQ575051 nbxb0086L17r CUGI Rice BAC Library O... 116 4e-024
gb|AY332476.1| Oryza sativa (japonica cultivar-group) MADS ... 115 1e-023
emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC O... 115 1e-023
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 115 1e-023
gb|AACV01024998.1| Oryza sativa (japonica cultivar-group) c... 115 1e-023
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 115 1e-023
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 115 1e-023
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 115 1e-023
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 115 1e-023
gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05... 115 1e-023
gb|AACV01022000.1| Oryza sativa (japonica cultivar-group) c... 115 1e-023
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 115 1e-023
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 115 1e-023
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 115 1e-023
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 115 1e-023
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 115 1e-023
gb|D46933.1|D46933 RICS11905A Rice green shoot Oryza sativa... 114 2e-023
gb|CF309429.1|CF309429 ABF--03-J22.g1 ABF3-overexpressing t... 102 2e-023
ref|XM_468584.1| Oryza sativa (japonica cultivar-group), p... 114 3e-023
emb|AL513004.1|CNS07EFJ Oryza sativa (japonica cultivar-gro... 113 5e-023
emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC O... 113 5e-023
emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC O... 113 5e-023
emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B... 113 5e-023
ref|NT_107159.1| Oryza sativa (japonica cultivar-group) 113 5e-023
gb|AACV01024177.1| Oryza sativa (japonica cultivar-group) c... 113 5e-023
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 113 5e-023
gb|AY177693.1| Oryza sativa (japonica cultivar-group) trans... 112 1e-022
gb|AY177700.1| Oryza sativa (japonica cultivar-group) trans... 112 1e-022
gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJN... 112 1e-022
gb|AACV01002820.1| Oryza sativa (japonica cultivar-group) c... 112 1e-022
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 112 1e-022
dbj|AP003379.2| Oryza sativa (japonica cultivar-group) geno... 112 1e-022
dbj|AP003346.4| Oryza sativa (japonica cultivar-group) geno... 112 1e-022
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 112 1e-022
gb|AACV01002803.1| Oryza sativa (japonica cultivar-group) c... 111 1e-022
gb|AC090974.1|AC090974 Oryza sativa (japonica cultivar-grou... 111 2e-022
dbj|AB003326.1| Oryza sativa (japonica cultivar-group) mRNA... 111 2e-022
dbj|AP003405.1| Oryza sativa (japonica cultivar-group) chro... 111 2e-022
dbj|AK069122.1| Oryza sativa (japonica cultivar-group) cDNA... 111 2e-022
gb|AY551925.1| Oryza sativa (japonica cultivar-group) MADS-... 111 2e-022
ref|XM_479752.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-022
dbj|AP003561.2| Oryza sativa (japonica cultivar-group) geno... 111 2e-022
gb|AU095354.1|AU095354 AU095354 Rice cDNA from immature lea... 110 3e-022
dbj|AK111723.1| Oryza sativa (japonica cultivar-group) cDNA... 109 9e-022
dbj|AB232157.1| Oryza sativa (japonica cultivar-group) mRNA... 109 9e-022
dbj|AK111776.1| Oryza sativa (japonica cultivar-group) cDNA... 108 1e-021
gb|AY345220.1| Oryza sativa (japonica cultivar-group) trans... 107 3e-021
dbj|AK109522.1| Oryza sativa (japonica cultivar-group) cDNA... 106 4e-021
dbj|AP004836.2| Oryza sativa (japonica cultivar-group) geno... 106 4e-021
dbj|AP004113.3| Oryza sativa (japonica cultivar-group) geno... 106 4e-021
gb|AACV01003433.1| Oryza sativa (japonica cultivar-group) c... 106 4e-021
ref|XM_464283.1| Oryza sativa (japonica cultivar-group), mRNA 106 4e-021
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 106 4e-021
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 106 4e-021
gb|AY177698.1| Oryza sativa (japonica cultivar-group) trans... 106 6e-021
gb|AC135920.2| Oryza sativa (japonica cultivar-group) chrom... 106 6e-021
gb|AACV01010477.1| Oryza sativa (japonica cultivar-group) c... 106 6e-021
gb|AACV01011127.1| Oryza sativa (japonica cultivar-group) c... 106 6e-021
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 106 6e-021
ref|NT_107224.1| Oryza sativa (japonica cultivar-group) 106 6e-021
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 106 6e-021
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 106 6e-021
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 106 6e-021
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 106 6e-021
>dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:E31864
Length = 1289
Score = 369 bits (801), Expect(3) = e-111
Identities = 162/185 (87%), Positives = 166/185 (89%)
Frame = -1 / +2
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 107 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 286
Query: 1041 YEYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMG 862
YEYA+DSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQ+CHKHLMG
Sbjct: 287 YEYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMG 466
Query: 861 EDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSE 682
EDLESLN K LKHI SRKSHLM ESISELQKKERSLQEENKALQKEL E
Sbjct: 467 EDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 646
Query: 681 RQKAV 667
RQK V
Sbjct: 647 RQKNV 661
Score = 236 bits (509), Expect(4) = 6e-082
Identities = 105/127 (82%), Positives = 109/127 (85%)
Frame = +2 / -3
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
F+DSRSSP+RCL H CMVSI A SFLYSWHQFPSLSDSAEIRAFSA E RS*RSRILS+
Sbjct: 486 FRDSRSSPMRCL*HFCMVSIFALSFLYSWHQFPSLSDSAEIRAFSAYE*RS*RSRILSIL 307
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 306 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 127
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 126 ILAARRS 106
Score = 166 bits (358), Expect(3) = 2e-056
Identities = 80/123 (65%), Positives = 88/123 (71%)
Frame = -3 / +1
Query: 1057 PQGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMP 878
PQGQALRVR L GQN TL*A+F+C*KGSYFS*I +*GKLVP IQET G++*DHTKM
Sbjct: 271 PQGQALRVRH*LQDGQNP*TL*ALFIC*KGSYFS*IRE*GKLVP*IQET*GKD*DHTKMS 450
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVNFXXXXXXXXXXXXXXGST 698
Q P GRGSR+ ES+R PT RAAAGE EAH IKKEPPY V+F GS
Sbjct: 451 QTPHGRGSRIPESQRTPTARAAAGEFIEAHNIKKEPPYA*VHFRAAEKGEVTAGGEQGSA 630
Query: 697 EGT 689
EGT
Sbjct: 631 EGT 639
Score = 126 bits (270), Expect(5) = 2e-039
Identities = 59/112 (52%), Positives = 62/112 (55%)
Frame = +3 / -1
Query: 690 VPSVEXXXXXXXXXXXXXXQKLTRP*GGSFLI*CXXXXXXXXXXXXXXXXDSKTLDPLPS 869
VPS E +K T+ *GGSFLI C DS LDPLP
Sbjct: 638 VPSAEPCSPPAVTSPFSAARKWTQA*GGSFLILCASMNSPAAALAVGVL*DSGILDPLP* 459
Query: 870 GACGIFVWSQFWPSVSCIRGTNFPHFQIQLK*EPFQHRNIAHNVLEFCPCGS 1025
G C IFVWSQ P VSCI GTNFPH +IQLK*EPFQH N AHNV FCP S
Sbjct: 458 GVCDIFVWSQSLP*VSCIHGTNFPHSRIQLK*EPFQHMNSAHNVQGFCPSWS 303
Score = 95.9 bits (203), Expect(3) = 2e-029
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = -2 / +3
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTK NVMS I MLKRLLFQLN +VREIGA NTGN R +LRPYK+ T+T WERI*+ *I
Sbjct: 312 WTKSLNVMSAIHMLKRLLFQLNPRVREIGAMNTGNLRQRLRPYKNVTNTSWERI*NP*IS 491
Query: 836 K 834
K
Sbjct: 492 K 494
Score = 93.2 bits (197), Expect(3) = 6e-023
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = +1 / -2
Query: 835 FWIQRL*ILSHQVLVASLYGLNFGLQFPVFVAPISLTFRFS*NKSLFSIGISLITF*NFV 1014
F IQ *ILSH+V V LYGLN L+FPVF+APISLT FS*NKSLFSI I+LITF +FV
Sbjct: 493 FEIQGF*ILSHEVFVTFLYGLNLCLKFPVFMAPISLTLGFS*NKSLFSI*IALITFKDFV 314
Query: 1015 H 1017
H
Sbjct: 313 H 311
Score = 64.8 bits (135), Expect(3) = 2e-056
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3 / +1
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
++R+ +GEDGA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 100 RRRAASGEDGAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 222
Score = 53.8 bits (111), Expect(4) = 6e-082
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2 / -3
Query: 668 TAFCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
T FCLS SSFCRA E+DS+IRWLFLD+M
Sbjct: 660 TFFCLSTSSFCRALFSSCSDLSFFCSSEMDSSIRWLFLDIM 538
Score = 52.8 bits (109), Expect(3) = 2e-029
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = -2 / +3
Query: 1217 GGRRRWGAARCS*SG*RTR*TGR*PSPSAGTGC* 1116
G RR WG RCS*SG*RTR TGR* SP G C*
Sbjct: 111 GERRGWGGGRCS*SG*RTRSTGR*RSPRGGMDC* 212
Score = 39.6 bits (80), Expect(3) = e-111
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 881 RIGGLPPWMLSHLNA* 928
Score = 39.6 bits (80), Expect(4) = 6e-082
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2 / -3
Query: 515 MLNGGKQMFCGGGSPC*SCLIMKEEDDELVWTW 613
++ GG Q+FCGG S C*S + +EE+ W W
Sbjct: 819 IITGG*QIFCGGRSAC*SLSMEEEEELVWAWGW 721
Score = 38.6 bits (78), Expect(3) = 2e-056
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / +1
Query: 436 PHRRSAAMDAEPPQRIRRAS 377
PHRRS+AMDAEPPQ +R +S
Sbjct: 880 PHRRSSAMDAEPPQCLR*SS 939
Score = 38.2 bits (77), Expect(4) = 6e-082
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / -3
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 924 ALRWLSIHGGRPPMR 880
Score = 37.3 bits (75), Expect(3) = e-111
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1 / +2
Query: 555 LPPPQNICFPPLSIGERGE 499
L PPQNIC+PP+ +GER +
Sbjct: 779 LLPPQNICYPPVMMGERND 835
Score = 37.3 bits (75), Expect(5) = 2e-039
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / -2
Query: 388 LCVEVAQHPWRQTCDAE 438
L +EVAQHPWR+T DAE
Sbjct: 928 LSIEVAQHPWRKTSDAE 878
Score = 33.1 bits (66), Expect(3) = 6e-023
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3 / -1
Query: 387 LMR*GGSASMAADLRCG 437
L *GGSASMA DLRCG
Sbjct: 929 LKH*GGSASMAEDLRCG 879
Score = 30.4 bits (60), Expect(3) = 2e-029
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 440 SSASQVCRHGC*ATSTHK 387
+SAS+V RHGC*ATS K
Sbjct: 876 NSASEVFRHGC*ATSMLK 929
Score = 30.4 bits (60), Expect(3) = 6e-023
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3 / -1
Query: 519 STAGSRCFVEVAVPVDPASS*RKKTMS 599
S AGSR FV VP DP++ R++++S
Sbjct: 815 SPAGSRYFVVEEVPADPSAWRRRRSLS 735
Score = 27.6 bits (54), Expect(5) = 2e-039
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1 / -2
Query: 505 SLSDAQRREADVLWRWQSLLILPHHEG 585
SL+ RR AD+LW + LLI H G
Sbjct: 829 SLAHHHRRVADILWWKKCLLIPQHGGG 749
Score = 25.4 bits (49), Expect(5) = 2e-039
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 584 EEDDELVWTW 613
EE++ELVW W
Sbjct: 756 EEEEELVWAW 727
Score = 24.0 bits (46), Expect(5) = 2e-039
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 1108 RLLQQPVPALGE 1143
RLLQQ +P LGE
Sbjct: 220 RLLQQSIPPLGE 185
>gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS215
mRNA, complete cds
Length = 1136
Score = 362 bits (785), Expect(3) = e-109
Identities = 160/184 (86%), Positives = 162/184 (88%)
Frame = -1 / +3
Query: 1218 RRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLY 1039
R MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKLY
Sbjct: 153 RAARMMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLY 332
Query: 1038 EYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGE 859
EYA+DSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQ+CHKHLMGE
Sbjct: 333 EYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGE 512
Query: 858 DLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSER 679
DLESLN K LKHI SRKSHLM ESISELQKKERSLQEENKALQKEL ER
Sbjct: 513 DLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVER 692
Query: 678 QKAV 667
QK V
Sbjct: 693 QKNV 704
Score = 232 bits (501), Expect(4) = 7e-081
Identities = 103/126 (81%), Positives = 107/126 (84%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
F+DSRSSP+RCL H CMVSI A SFLYSWHQFPSLSDSAEIRAFSA E RS*RSRILS+
Sbjct: 529 FRDSRSSPMRCL*HFCMVSIFALSFLYSWHQFPSLSDSAEIRAFSAYE*RS*RSRILSIL 350
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 349 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 170
Query: 1202 IFACLR 1219
I R
Sbjct: 169 IILAAR 152
Score = 166 bits (358), Expect(3) = 4e-055
Identities = 80/123 (65%), Positives = 88/123 (71%)
Frame = -3 / +2
Query: 1057 PQGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMP 878
PQGQALRVR L GQN TL*A+F+C*KGSYFS*I +*GKLVP IQET G++*DHTKM
Sbjct: 314 PQGQALRVRH*LQDGQNP*TL*ALFIC*KGSYFS*IRE*GKLVP*IQET*GKD*DHTKMS 493
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVNFXXXXXXXXXXXXXXGST 698
Q P GRGSR+ ES+R PT RAAAGE EAH IKKEPPY V+F GS
Sbjct: 494 QTPHGRGSRIPESQRTPTARAAAGEFIEAHNIKKEPPYA*VHFRAAEKGEVTAGGEQGSA 673
Query: 697 EGT 689
EGT
Sbjct: 674 EGT 682
Score = 126 bits (270), Expect(5) = 2e-039
Identities = 59/112 (52%), Positives = 62/112 (55%)
Frame = +3 / -3
Query: 690 VPSVEXXXXXXXXXXXXXXQKLTRP*GGSFLI*CXXXXXXXXXXXXXXXXDSKTLDPLPS 869
VPS E +K T+ *GGSFLI C DS LDPLP
Sbjct: 681 VPSAEPCSPPAVTSPFSAARKWTQA*GGSFLILCASMNSPAAALAVGVL*DSGILDPLP* 502
Query: 870 GACGIFVWSQFWPSVSCIRGTNFPHFQIQLK*EPFQHRNIAHNVLEFCPCGS 1025
G C IFVWSQ P VSCI GTNFPH +IQLK*EPFQH N AHNV FCP S
Sbjct: 501 GVCDIFVWSQSLP*VSCIHGTNFPHSRIQLK*EPFQHMNSAHNVQGFCPSWS 346
Score = 95.9 bits (203), Expect(3) = 1e-029
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = -2 / +1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTK NVMS I MLKRLLFQLN +VREIGA NTGN R +LRPYK+ T+T WERI*+ *I
Sbjct: 355 WTKSLNVMSAIHMLKRLLFQLNPRVREIGAMNTGNLRQRLRPYKNVTNTSWERI*NP*IS 534
Query: 836 K 834
K
Sbjct: 535 K 537
Score = 93.2 bits (197), Expect(3) = 5e-023
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = +1 / -1
Query: 835 FWIQRL*ILSHQVLVASLYGLNFGLQFPVFVAPISLTFRFS*NKSLFSIGISLITF*NFV 1014
F IQ *ILSH+V V LYGLN L+FPVF+APISLT FS*NKSLFSI I+LITF +FV
Sbjct: 536 FEIQGF*ILSHEVFVTFLYGLNLCLKFPVFMAPISLTLGFS*NKSLFSI*IALITFKDFV 357
Query: 1015 H 1017
H
Sbjct: 356 H 354
Score = 59.7 bits (124), Expect(3) = 4e-055
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = -3 / +2
Query: 1240 GRERKQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
G R++ + +DGA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 131 GIGRRRAASGEDDGAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 265
Score = 53.8 bits (111), Expect(4) = 7e-081
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2 / -2
Query: 668 TAFCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
T FCLS SSFCRA E+DS+IRWLFLD+M
Sbjct: 703 TFFCLSTSSFCRALFSSCSDLSFFCSSEMDSSIRWLFLDIM 581
Score = 52.8 bits (109), Expect(3) = 1e-029
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = -2 / +1
Query: 1256 RSRIDRKRKEAEIGGRRRWGAARCS*SG*RTR*TGR*PSPSAGTGC* 1116
RS DR R A R WG RCS*SG*RTR TGR* SP G C*
Sbjct: 115 RSDRDRDRPPASGERRG*WGGGRCS*SG*RTRSTGR*RSPRGGMDC* 255
Score = 39.6 bits (80), Expect(3) = e-109
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 924 RIGGLPPWMLSHLNA* 971
Score = 39.6 bits (80), Expect(4) = 7e-081
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2 / -2
Query: 515 MLNGGKQMFCGGGSPC*SCLIMKEEDDELVWTW 613
++ GG Q+FCGG S C*S + +EE+ W W
Sbjct: 862 IITGG*QIFCGGRSAC*SLSMEEEEELVWAWGW 764
Score = 38.6 bits (78), Expect(3) = 4e-055
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / +2
Query: 436 PHRRSAAMDAEPPQRIRRAS 377
PHRRS+AMDAEPPQ +R +S
Sbjct: 923 PHRRSSAMDAEPPQCLR*SS 982
Score = 38.2 bits (77), Expect(4) = 7e-081
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / -2
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 967 ALRWLSIHGGRPPMR 923
Score = 37.3 bits (75), Expect(3) = e-109
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1 / +3
Query: 555 LPPPQNICFPPLSIGERGE 499
L PPQNIC+PP+ +GER +
Sbjct: 822 LLPPQNICYPPVMMGERND 878
Score = 37.3 bits (75), Expect(5) = 2e-039
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 388 LCVEVAQHPWRQTCDAE 438
L +EVAQHPWR+T DAE
Sbjct: 971 LSIEVAQHPWRKTSDAE 921
Score = 33.1 bits (66), Expect(3) = 5e-023
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3 / -3
Query: 387 LMR*GGSASMAADLRCG 437
L *GGSASMA DLRCG
Sbjct: 972 LKH*GGSASMAEDLRCG 922
Score = 30.4 bits (60), Expect(3) = 1e-029
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 440 SSASQVCRHGC*ATSTHK 387
+SAS+V RHGC*ATS K
Sbjct: 919 NSASEVFRHGC*ATSMLK 972
Score = 30.4 bits (60), Expect(3) = 5e-023
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3 / -3
Query: 519 STAGSRCFVEVAVPVDPASS*RKKTMS 599
S AGSR FV VP DP++ R++++S
Sbjct: 858 SPAGSRYFVVEEVPADPSAWRRRRSLS 778
Score = 27.6 bits (54), Expect(5) = 2e-039
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 505 SLSDAQRREADVLWRWQSLLILPHHEG 585
SL+ RR AD+LW + LLI H G
Sbjct: 872 SLAHHHRRVADILWWKKCLLIPQHGGG 792
Score = 25.4 bits (49), Expect(5) = 2e-039
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 584 EEDDELVWTW 613
EE++ELVW W
Sbjct: 799 EEEEELVWAW 770
Score = 24.0 bits (46), Expect(5) = 2e-039
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 1108 RLLQQPVPALGE 1143
RLLQQ +P LGE
Sbjct: 263 RLLQQSIPPLGE 228
>ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 807
Score = 362 bits (784), Expect(3) = e-105
Identities = 159/179 (88%), Positives = 161/179 (89%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKLYEYA+D
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 180
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESL 844
SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQ+CHKHLMGEDLESL
Sbjct: 181 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESL 360
Query: 843 NPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSERQKAV 667
N K LKHI SRKSHLM ESISELQKKERSLQEENKALQKEL ERQK V
Sbjct: 361 NLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNV 537
Score = 229 bits (494), Expect(4) = 2e-078
Identities = 101/120 (84%), Positives = 105/120 (87%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
F+DSRSSP+RCL H CMVSI A SFLYSWHQFPSLSDSAEIRAFSA E RS*RSRILS+
Sbjct: 362 FRDSRSSPMRCL*HFCMVSIFALSFLYSWHQFPSLSDSAEIRAFSAYE*RS*RSRILSIL 183
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 182 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 3
Score = 166 bits (358), Expect(4) = 2e-053
Identities = 80/123 (65%), Positives = 88/123 (71%)
Frame = -3 / +3
Query: 1057 PQGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMP 878
PQGQALRVR L GQN TL*A+F+C*KGSYFS*I +*GKLVP IQET G++*DHTKM
Sbjct: 147 PQGQALRVRH*LQDGQNP*TL*ALFIC*KGSYFS*IRE*GKLVP*IQET*GKD*DHTKMS 326
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVNFXXXXXXXXXXXXXXGST 698
Q P GRGSR+ ES+R PT RAAAGE EAH IKKEPPY V+F GS
Sbjct: 327 QTPHGRGSRIPESQRTPTARAAAGEFIEAHNIKKEPPYA*VHFRAAEKGEVTAGGEQGSA 506
Query: 697 EGT 689
EGT
Sbjct: 507 EGT 515
Score = 126 bits (270), Expect(4) = 2e-034
Identities = 59/112 (52%), Positives = 62/112 (55%)
Frame = +3 / -3
Query: 690 VPSVEXXXXXXXXXXXXXXQKLTRP*GGSFLI*CXXXXXXXXXXXXXXXXDSKTLDPLPS 869
VPS E +K T+ *GGSFLI C DS LDPLP
Sbjct: 514 VPSAEPCSPPAVTSPFSAARKWTQA*GGSFLILCASMNSPAAALAVGVL*DSGILDPLP* 335
Query: 870 GACGIFVWSQFWPSVSCIRGTNFPHFQIQLK*EPFQHRNIAHNVLEFCPCGS 1025
G C IFVWSQ P VSCI GTNFPH +IQLK*EPFQH N AHNV FCP S
Sbjct: 334 GVCDIFVWSQSLP*VSCIHGTNFPHSRIQLK*EPFQHMNSAHNVQGFCPSWS 179
Score = 95.9 bits (203), Expect(3) = 3e-028
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = -2 / +2
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTK NVMS I MLKRLLFQLN +VREIGA NTGN R +LRPYK+ T+T WERI*+ *I
Sbjct: 188 WTKSLNVMSAIHMLKRLLFQLNPRVREIGAMNTGNLRQRLRPYKNVTNTSWERI*NP*IS 367
Query: 836 K 834
K
Sbjct: 368 K 370
Score = 53.8 bits (111), Expect(4) = 2e-078
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2 / -2
Query: 668 TAFCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
T FCLS SSFCRA E+DS+IRWLFLD+M
Sbjct: 536 TFFCLSTSSFCRALFSSCSDLSFFCSSEMDSSIRWLFLDIM 414
Score = 52.8 bits (109), Expect(4) = 2e-053
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -3 / +3
Query: 1201 GARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
GA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 3 GAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 98
Score = 47.3 bits (97), Expect(3) = 3e-028
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -2 / +2
Query: 1202 WGAARCS*SG*RTR*TGR*PSPSAGTGC* 1116
WG RCS*SG*RTR TGR* SP G C*
Sbjct: 2 WGGGRCS*SG*RTRSTGR*RSPRGGMDC* 88
Score = 39.6 bits (80), Expect(3) = e-105
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +1
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 760 RIGGLPPWMLSHLNA* 807
Score = 38.2 bits (77), Expect(4) = 2e-078
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / -2
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 803 ALRWLSIHGGRPPMR 759
Score = 37.3 bits (75), Expect(4) = 2e-034
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 388 LCVEVAQHPWRQTCDAE 438
L +EVAQHPWR+T DAE
Sbjct: 807 LSIEVAQHPWRKTSDAE 757
Score = 36.3 bits (73), Expect(4) = 2e-053
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 436 PHRRSAAMDAEPPQ 395
PHRRS+AMDAEPPQ
Sbjct: 759 PHRRSSAMDAEPPQ 800
Score = 34.5 bits (69), Expect(4) = 2e-078
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / -2
Query: 533 QMFCGGGSPC*SCLIMKEEDDELVWTW 613
Q+FCGG S C*S + +EE+ W W
Sbjct: 677 QIFCGGRSAC*SLSMEEEEELVWAWGW 597
Score = 29.9 bits (59), Expect(3) = 3e-028
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / +2
Query: 440 SSASQVCRHGC*ATS 396
+SAS+V RHGC*ATS
Sbjct: 755 NSASEVFRHGC*ATS 799
Score = 25.4 bits (49), Expect(4) = 2e-034
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 584 EEDDELVWTW 613
EE++ELVW W
Sbjct: 632 EEEEELVWAW 603
Score = 24.9 bits (48), Expect(3) = e-105
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1 / +1
Query: 555 LPPPQNICFPPLSIGERGE 499
LPP +PP+ +GER +
Sbjct: 658 LPPQNICSYPPVMMGERND 714
Score = 24.0 bits (46), Expect(4) = 2e-034
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 1108 RLLQQPVPALGE 1143
RLLQQ +P LGE
Sbjct: 96 RLLQQSIPPLGE 61
Score = 21.7 bits (41), Expect(4) = 2e-053
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / +1
Query: 555 LPPPQNICFPP 523
L PPQNIC P
Sbjct: 655 LLPPQNICSYP 687
>dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K24, full
insert sequence
Length = 2563
Score = 207 bits (446), Expect(4) = e-103
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -1 / +3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 165 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 344
Query: 1041 YEYASDSRMDKILERYERYSYAEKALISAESESE 940
YEYA+DSRMDKILERYERYSYAEKALISAESESE
Sbjct: 345 YEYATDSRMDKILERYERYSYAEKALISAESESE 446
Score = 168 bits (361), Expect(5) = 5e-074
Identities = 79/96 (82%), Positives = 81/96 (84%)
Frame = +2 / -1
Query: 935 FPSLSDSAEIRAFSA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAF 1114
F SLSDSAEIRAFSA E RS*RSRILS+ ES AYS*SLPLGEKTM ATSASQRTEISCAF
Sbjct: 451 FTSLSDSAEIRAFSAYE*RS*RSRILSILESVAYS*SLPLGEKTMAATSASQRTEISCAF 272
Query: 1115 FSSPFRRLEKVTCRFILFSIRFSCTLPRPIFACLRS 1222
FS+PF LE VTC ILFSIRFSCT PRPI A RS
Sbjct: 271 FSNPFLLLENVTCLLILFSIRFSCTFPRPILAARRS 164
Score = 166 bits (357), Expect(4) = e-103
Identities = 73/92 (79%), Positives = 75/92 (81%)
Frame = -1 / +2
Query: 942 EGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLM 763
+GNWCHEYRKLKAKIETIQ+CHKHLMGEDLESLN K LKHI SRKSHLM
Sbjct: 1778 QGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLM 1957
Query: 762 AESISELQKKERSLQEENKALQKELSERQKAV 667
ESISELQKKERSLQEENKALQKEL ERQK V
Sbjct: 1958 LESISELQKKERSLQEENKALQKELVERQKNV 2053
Score = 111 bits (237), Expect(4) = 4e-052
Identities = 51/84 (60%), Positives = 56/84 (66%)
Frame = -3 / +1
Query: 940 GKLVPRIQETEGQN*DHTKMPQAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYG 761
GKLVP IQET G++*DHTKM Q P GRGSR+ ES+R PT RAAAGE EAH IKKEPPY
Sbjct: 1780 GKLVP*IQET*GKD*DHTKMSQTPHGRGSRIPESQRTPTARAAAGEFIEAHNIKKEPPYA 1959
Query: 760 RVNFXXXXXXXXXXXXXXGSTEGT 689
V+F GS EGT
Sbjct: 1960 *VHFRAAEKGEVTAGGEQGSAEGT 2031
Score = 80.3 bits (169), Expect(6) = 8e-032
Identities = 39/84 (46%), Positives = 41/84 (48%)
Frame = +3 / -3
Query: 690 VPSVEXXXXXXXXXXXXXXQKLTRP*GGSFLI*CXXXXXXXXXXXXXXXXDSKTLDPLPS 869
VPS E +K T+ *GGSFLI C DS LDPLP
Sbjct: 2030 VPSAEPCSPPAVTSPFSAARKWTQA*GGSFLILCASMNSPAAALAVGVL*DSGILDPLP* 1851
Query: 870 GACGIFVWSQFWPSVSCIRGTNFP 941
G C IFVWSQ P VSCI GTNFP
Sbjct: 1850 GVCDIFVWSQSLP*VSCIHGTNFP 1779
Score = 73.0 bits (153), Expect(5) = 5e-074
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFP 940
F+DSRSSP+RCL H CMVSI A SFLYSWHQFP
Sbjct: 1878 FRDSRSSPMRCL*HFCMVSIFALSFLYSWHQFP 1780
Score = 64.8 bits (135), Expect(4) = 4e-052
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3 / +2
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
++R+ +GEDGA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 158 RRRAASGEDGAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 280
Score = 63.4 bits (132), Expect(4) = 4e-052
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3 / +2
Query: 1057 PQGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GK 935
PQGQALRVR L GQN TL*A+F+C*KGSYFS*I +*GK
Sbjct: 329 PQGQALRVRH*LQDGQNP*TL*ALFIC*KGSYFS*IRE*GK 451
Score = 57.0 bits (118), Expect(4) = 1e-024
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = -2 / +3
Query: 941 REIGATNTGN*RPKLRPYKDATST*WERI*SL*IQK 834
REIGA NTGN R +LRPYK+ T+T WERI*+ *I K
Sbjct: 1779 REIGAMNTGNLRQRLRPYKNVTNTSWERI*NP*ISK 1886
Score = 53.8 bits (111), Expect(5) = 5e-074
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2 / -2
Query: 668 TAFCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
T FCLS SSFCRA E+DS+IRWLFLD+M
Sbjct: 2052 TFFCLSTSSFCRALFSSCSDLSFFCSSEMDSSIRWLFLDIM 1930
Score = 52.8 bits (109), Expect(4) = 1e-024
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = -2 / +1
Query: 1217 GGRRRWGAARCS*SG*RTR*TGR*PSPSAGTGC* 1116
G RR WG RCS*SG*RTR TGR* SP G C*
Sbjct: 169 GERRGWGGGRCS*SG*RTRSTGR*RSPRGGMDC* 270
Score = 52.4 bits (108), Expect(6) = 8e-032
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3 / -2
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCPCGS 1025
PH +IQLK*EPFQH N AHNV FCP S
Sbjct: 447 PHSRIQLK*EPFQHMNSAHNVQGFCPSWS 361
Score = 44.1 bits (90), Expect(4) = 1e-024
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2 / +1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVR 939
WTK NVMS I MLKRLLFQLN +VR
Sbjct: 370 WTKSLNVMSAIHMLKRLLFQLNPRVR 447
Score = 39.6 bits (80), Expect(4) = e-103
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 2273 RIGGLPPWMLSHLNA* 2320
Score = 39.6 bits (80), Expect(5) = 5e-074
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2 / -2
Query: 515 MLNGGKQMFCGGGSPC*SCLIMKEEDDELVWTW 613
++ GG Q+FCGG S C*S + +EE+ W W
Sbjct: 2211 IITGG*QIFCGGRSAC*SLSMEEEEELVWAWGW 2113
Score = 38.6 bits (78), Expect(4) = 4e-052
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / +1
Query: 436 PHRRSAAMDAEPPQRIRRAS 377
PHRRS+AMDAEPPQ +R +S
Sbjct: 2272 PHRRSSAMDAEPPQCLR*SS 2331
Score = 38.2 bits (77), Expect(5) = 5e-074
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / -2
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 2316 ALRWLSIHGGRPPMR 2272
Score = 37.3 bits (75), Expect(4) = e-103
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1 / +2
Query: 555 LPPPQNICFPPLSIGERGE 499
L PPQNIC+PP+ +GER +
Sbjct: 2171 LLPPQNICYPPVMMGERND 2227
Score = 37.3 bits (75), Expect(6) = 8e-032
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 388 LCVEVAQHPWRQTCDAE 438
L +EVAQHPWR+T DAE
Sbjct: 2320 LSIEVAQHPWRKTSDAE 2270
Score = 30.4 bits (60), Expect(4) = 1e-024
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 440 SSASQVCRHGC*ATSTHK 387
+SAS+V RHGC*ATS K
Sbjct: 2268 NSASEVFRHGC*ATSMLK 2321
Score = 27.6 bits (54), Expect(6) = 8e-032
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 505 SLSDAQRREADVLWRWQSLLILPHHEG 585
SL+ RR AD+LW + LLI H G
Sbjct: 2221 SLAHHHRRVADILWWKKCLLIPQHGGG 2141
Score = 25.4 bits (49), Expect(6) = 8e-032
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 584 EEDDELVWTW 613
EE++ELVW W
Sbjct: 2148 EEEEELVWAW 2119
Score = 24.0 bits (46), Expect(6) = 8e-032
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 1108 RLLQQPVPALGE 1143
RLLQQ +P LGE
Sbjct: 278 RLLQQSIPPLGE 243
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10) mRNA,
complete cds
Length = 964
Score = 335 bits (725), Expect(2) = 7e-094
Identities = 144/184 (78%), Positives = 160/184 (86%)
Frame = -1 / +2
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 68 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 247
Query: 1044 LYEYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLM 865
LYEYA+DS MDKILERYERYSYAEK LISAES+++GNWCHEYRKLKAK+ETIQ+C KHLM
Sbjct: 248 LYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLM 427
Query: 864 GEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELS 685
GEDLESLN K LKHIRSRKS LM ESI+ELQ+KE+SLQEENK LQKEL
Sbjct: 428 GEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELV 607
Query: 684 ERQK 673
E+QK
Sbjct: 608 EKQK 619
Score = 218 bits (471), Expect(4) = 3e-064
Identities = 101/129 (78%), Positives = 106/129 (82%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
FKDSRSSP+RC H C+VS LAFSFLYSWHQ P +SDSAEIR FSA*E RS*RSRILS+
Sbjct: 450 FKDSRSSPMRCF*HFCIVSTLAFSFLYSWHQLP*VSDSAEIRTFSA*E*RS*RSRILSIH 271
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSCTLPRP
Sbjct: 270 ESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSCTLPRP 91
Query: 1202 IFACLRSLL 1228
IF LL
Sbjct: 90 IFLLFFLLL 64
Score = 133 bits (284), Expect(3) = 9e-046
Identities = 64/101 (63%), Positives = 76/101 (75%)
Frame = -3 / +1
Query: 1054 QGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMPQ 875
QGQALRVR RL +GQN TL*A+ LC KG YFS*I* G+LVPRI ETEG *D+T+M +
Sbjct: 238 QGQALRVRHRLMYGQNP*TL*ALLLCRKGPYFS*I*HSGQLVPRI*ETEG*G*DNTEMSK 417
Query: 874 APDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVN 752
AP GRGS +FES+RA AAAG+ E +QI+KEP RV+
Sbjct: 418 APHGRGS*IFESQRAAAAGAAAGKFVETYQIQKEPTNARVH 540
Score = 98.2 bits (208), Expect(3) = 1e-022
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / -1
Query: 763 HKVALS*SDVXXXXXXXXXXXXXXFWIQRL*ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
H +ALS SD+ F IQR ILSH+VL+ LY LN LQFP+FVAP++L
Sbjct: 529 H*LALSGSDMFQRIFQLLLQLLQLFEIQRFKILSHEVLLTFLYCLNLSLQFPIFVAPVAL 350
Query: 943 TFRFS*NKSLFSIGISLITF*NFVH 1017
+ RFS*NK LF IG++LITF +FVH
Sbjct: 349 SVRFS*NKDLFCIGVALITFKDFVH 275
Score = 86.3 bits (182), Expect(2) = 4e-027
Identities = 46/92 (50%), Positives = 52/92 (56%)
Frame = -2 / +3
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTK NVMS PM KR LFQLNL +R GATN GN*R +LR Y++ ST WERI +L*I
Sbjct: 276 WTKSLNVMSATPMQKRSLFQLNLTLRATGATNIGN*RLRLRQYRNVKSTSWERILNL*IS 455
Query: 836 KXXXXXXXXXXXXXXXSDQERATLWPSQFLSY 741
K SD ERA S S+
Sbjct: 456 KSCSSWSSSWKIR*NISDPERAN*CSSPLTSF 551
Score = 67.5 bits (141), Expect(3) = 9e-046
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 1234 ERKQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEG 1109
E ++ E EDGA QGAAEADREQD+PAGDLLQA AA+EG
Sbjct: 58 EEEEEEEQEEDGAGQGAAEADREQDQPAGDLLQAQVGAAQEG 183
Score = 60.2 bits (125), Expect(2) = 4e-027
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -2 / +3
Query: 1205 RWGAARCS*SG*RTR*TGR*PSPSAGTGC 1119
RWG ARCS*SG RTR TGR*PSPSAG GC
Sbjct: 87 RWGGARCS*SGSRTRSTGR*PSPSAGRGC 173
Score = 40.5 bits (82), Expect(4) = 3e-064
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2 / -2
Query: 674 FCLSESSFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
FC S SSFCR +DS+I WLFLDL+
Sbjct: 618 FCFSTSSFCRTLFSSCSDFSFR*SSLMDSSISWLFLDLI 502
Score = 38.2 bits (77), Expect(2) = 7e-094
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 791 GLPPWMLSHING*GG 835
Score = 32.7 bits (65), Expect(3) = 9e-046
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +3
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 771 SHSMFALGCHHGC*ATSTAKE 833
Score = 31.8 bits (63), Expect(4) = 3e-064
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 837 KPP*PLMWLSIHGGSP 790
Score = 28.6 bits (56), Expect(3) = 1e-022
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 1108 RLLQQPVPALGEG 1146
RLL+QP PALGEG
Sbjct: 184 RLLEQPRPALGEG 146
Score = 28.1 bits (55), Expect(3) = 1e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 385 SLCVEVAQHPWRQ 423
SL V+VAQHPW Q
Sbjct: 832 SLAVDVAQHPWWQ 794
Score = 24.0 bits (46), Expect(4) = 3e-064
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2 / -2
Query: 572 LIMKEEDDELV 604
LIMKE+D+ELV
Sbjct: 693 LIMKEDDEELV 661
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 813
Score = 326 bits (706), Expect(2) = 2e-091
Identities = 140/178 (78%), Positives = 155/178 (87%)
Frame = -1 / +3
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 3 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 182
Query: 1044 LYEYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLM 865
LYEYA+DS MDKILERYERYSYAEK LISAES+++GNWCHEYRKLKAK+ETIQ+C KHLM
Sbjct: 183 LYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLM 362
Query: 864 GEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKE 691
GEDLESLN K LKHIRSRKS LM ESI+ELQ+KE+SLQEENK LQKE
Sbjct: 363 GEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKE 536
Score = 218 bits (470), Expect(4) = 3e-061
Identities = 99/122 (81%), Positives = 104/122 (85%)
Frame = +2 / -3
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
FKDSRSSP+RC H C+VS LAFSFLYSWHQ P +SDSAEIR FSA*E RS*RSRILS+
Sbjct: 385 FKDSRSSPMRCF*HFCIVSTLAFSFLYSWHQLP*VSDSAEIRTFSA*E*RS*RSRILSIH 206
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSCTLPRP
Sbjct: 205 ESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSCTLPRP 26
Query: 1202 IF 1207
IF
Sbjct: 25 IF 20
Score = 133 bits (284), Expect(3) = 4e-045
Identities = 64/101 (63%), Positives = 76/101 (75%)
Frame = -3 / +2
Query: 1054 QGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMPQ 875
QGQALRVR RL +GQN TL*A+ LC KG YFS*I* G+LVPRI ETEG *D+T+M +
Sbjct: 173 QGQALRVRHRLMYGQNP*TL*ALLLCRKGPYFS*I*HSGQLVPRI*ETEG*G*DNTEMSK 352
Query: 874 APDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVN 752
AP GRGS +FES+RA AAAG+ E +QI+KEP RV+
Sbjct: 353 APHGRGS*IFESQRAAAAGAAAGKFVETYQIQKEPTNARVH 475
Score = 98.2 bits (208), Expect(3) = 8e-023
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / -2
Query: 763 HKVALS*SDVXXXXXXXXXXXXXXFWIQRL*ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
H +ALS SD+ F IQR ILSH+VL+ LY LN LQFP+FVAP++L
Sbjct: 464 H*LALSGSDMFQRIFQLLLQLLQLFEIQRFKILSHEVLLTFLYCLNLSLQFPIFVAPVAL 285
Query: 943 TFRFS*NKSLFSIGISLITF*NFVH 1017
+ RFS*NK LF IG++LITF +FVH
Sbjct: 284 SVRFS*NKDLFCIGVALITFKDFVH 210
Score = 86.3 bits (182), Expect(2) = 4e-027
Identities = 46/92 (50%), Positives = 52/92 (56%)
Frame = -2 / +1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTK NVMS PM KR LFQLNL +R GATN GN*R +LR Y++ ST WERI +L*I
Sbjct: 211 WTKSLNVMSATPMQKRSLFQLNLTLRATGATNIGN*RLRLRQYRNVKSTSWERILNL*IS 390
Query: 836 KXXXXXXXXXXXXXXXSDQERATLWPSQFLSY 741
K SD ERA S S+
Sbjct: 391 KSCSSWSSSWKIR*NISDPERAN*CSSPLTSF 486
Score = 64.8 bits (135), Expect(3) = 4e-045
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -3 / +2
Query: 1225 QRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEG 1109
+ E EDGA QGAAEADREQD+PAGDLLQA AA+EG
Sbjct: 2 EEEEQEEDGAGQGAAEADREQDQPAGDLLQAQVGAAQEG 118
Score = 60.2 bits (125), Expect(2) = 4e-027
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -2 / +1
Query: 1205 RWGAARCS*SG*RTR*TGR*PSPSAGTGC 1119
RWG ARCS*SG RTR TGR*PSPSAG GC
Sbjct: 22 RWGGARCS*SGSRTRSTGR*PSPSAGRGC 108
Score = 38.2 bits (77), Expect(2) = 2e-091
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 747 GLPPWMLSHING*GG 791
Score = 32.7 bits (65), Expect(3) = 4e-045
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 727 SHSMFALGCHHGC*ATSTAKE 789
Score = 31.8 bits (63), Expect(4) = 3e-061
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 793 KPP*PLMWLSIHGGSP 746
Score = 30.4 bits (60), Expect(4) = 3e-061
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2 / -3
Query: 692 SFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
SFCR +DS+I WLFLDL+
Sbjct: 535 SFCRTLFSSCSDFSFR*SSLMDSSISWLFLDLI 437
Score = 28.6 bits (56), Expect(3) = 8e-023
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 1108 RLLQQPVPALGEG 1146
RLL+QP PALGEG
Sbjct: 119 RLLEQPRPALGEG 81
Score = 28.1 bits (55), Expect(3) = 8e-023
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -2
Query: 385 SLCVEVAQHPWRQ 423
SL V+VAQHPW Q
Sbjct: 788 SLAVDVAQHPWWQ 750
Score = 24.0 bits (46), Expect(4) = 3e-061
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2 / -3
Query: 572 LIMKEEDDELV 604
LIMKE+D+ELV
Sbjct: 649 LIMKEDDEELV 617
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211
mRNA, complete cds
Length = 1109
Score = 326 bits (706), Expect(2) = 3e-091
Identities = 140/178 (78%), Positives = 155/178 (87%)
Frame = -1 / +3
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 81 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 260
Query: 1044 LYEYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLM 865
LYEYA+DS MDKILERYERYSYAEK LISAES+++GNWCHEYRKLKAK+ETIQ+C KHLM
Sbjct: 261 LYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLM 440
Query: 864 GEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKE 691
GEDLESLN K LKHIRSRKS LM ESI+ELQ+KE+SLQEENK LQKE
Sbjct: 441 GEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKE 614
Score = 218 bits (471), Expect(4) = 5e-061
Identities = 101/129 (78%), Positives = 106/129 (82%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
FKDSRSSP+RC H C+VS LAFSFLYSWHQ P +SDSAEIR FSA*E RS*RSRILS+
Sbjct: 463 FKDSRSSPMRCF*HFCIVSTLAFSFLYSWHQLP*VSDSAEIRTFSA*E*RS*RSRILSIH 284
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSCTLPRP
Sbjct: 283 ESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSCTLPRP 104
Query: 1202 IFACLRSLL 1228
IF LL
Sbjct: 103 IFLLFFLLL 77
Score = 133 bits (284), Expect(3) = 1e-045
Identities = 64/101 (63%), Positives = 76/101 (75%)
Frame = -3 / +2
Query: 1054 QGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMPQ 875
QGQALRVR RL +GQN TL*A+ LC KG YFS*I* G+LVPRI ETEG *D+T+M +
Sbjct: 251 QGQALRVRHRLMYGQNP*TL*ALLLCRKGPYFS*I*HSGQLVPRI*ETEG*G*DNTEMSK 430
Query: 874 APDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVN 752
AP GRGS +FES+RA AAAG+ E +QI+KEP RV+
Sbjct: 431 APHGRGS*IFESQRAAAAGAAAGKFVETYQIQKEPTNARVH 553
Score = 98.2 bits (208), Expect(3) = 2e-022
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / -1
Query: 763 HKVALS*SDVXXXXXXXXXXXXXXFWIQRL*ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
H +ALS SD+ F IQR ILSH+VL+ LY LN LQFP+FVAP++L
Sbjct: 542 H*LALSGSDMFQRIFQLLLQLLQLFEIQRFKILSHEVLLTFLYCLNLSLQFPIFVAPVAL 363
Query: 943 TFRFS*NKSLFSIGISLITF*NFVH 1017
+ RFS*NK LF IG++LITF +FVH
Sbjct: 362 SVRFS*NKDLFCIGVALITFKDFVH 288
Score = 86.3 bits (182), Expect(2) = 4e-027
Identities = 46/92 (50%), Positives = 52/92 (56%)
Frame = -2 / +1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTK NVMS PM KR LFQLNL +R GATN GN*R +LR Y++ ST WERI +L*I
Sbjct: 289 WTKSLNVMSATPMQKRSLFQLNLTLRATGATNIGN*RLRLRQYRNVKSTSWERILNL*IS 468
Query: 836 KXXXXXXXXXXXXXXXSDQERATLWPSQFLSY 741
K SD ERA S S+
Sbjct: 469 KSCSSWSSSWKIR*NISDPERAN*CSSPLTSF 564
Score = 67.5 bits (141), Expect(3) = 1e-045
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +2
Query: 1234 ERKQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEG 1109
E ++ E EDGA QGAAEADREQD+PAGDLLQA AA+EG
Sbjct: 71 EEEEEEEQEEDGAGQGAAEADREQDQPAGDLLQAQVGAAQEG 196
Score = 60.2 bits (125), Expect(2) = 4e-027
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -2 / +1
Query: 1205 RWGAARCS*SG*RTR*TGR*PSPSAGTGC 1119
RWG ARCS*SG RTR TGR*PSPSAG GC
Sbjct: 100 RWGGARCS*SGSRTRSTGR*PSPSAGRGC 186
Score = 38.2 bits (77), Expect(2) = 3e-091
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 825 GLPPWMLSHING*GG 869
Score = 32.7 bits (65), Expect(3) = 1e-045
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 805 SHSMFALGCHHGC*ATSTAKE 867
Score = 31.8 bits (63), Expect(4) = 5e-061
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 871 KPP*PLMWLSIHGGSP 824
Score = 30.4 bits (60), Expect(4) = 5e-061
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2 / -2
Query: 692 SFCRAXXXXXXXXXXXXXXEIDSAIRWLFLDLM 790
SFCR +DS+I WLFLDL+
Sbjct: 613 SFCRTLFSSCSDFSFR*SSLMDSSISWLFLDLI 515
Score = 28.6 bits (56), Expect(3) = 2e-022
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 1108 RLLQQPVPALGEG 1146
RLL+QP PALGEG
Sbjct: 197 RLLEQPRPALGEG 159
Score = 28.1 bits (55), Expect(3) = 2e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 385 SLCVEVAQHPWRQ 423
SL V+VAQHPW Q
Sbjct: 866 SLAVDVAQHPWWQ 828
Score = 24.0 bits (46), Expect(4) = 5e-061
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2 / -2
Query: 572 LIMKEEDDELV 604
LIMKE+D+ELV
Sbjct: 727 LIMKEDDEELV 695
>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full
insert sequence
Length = 1284
Score = 319 bits (691), Expect = 4e-085
Identities = 137/175 (78%), Positives = 152/175 (86%)
Frame = -1 / +2
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 287 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 466
Query: 1044 LYEYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLM 865
LYEYA+DS MDKILERYERYSYAEK LISAES+++GNWCHEYRKLKAK+ETIQ+C KHLM
Sbjct: 467 LYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLM 646
Query: 864 GEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKAL 700
GEDLESLN K LKHIRSRKS LM ESI+ELQ+KE+SLQEENK L
Sbjct: 647 GEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVL 811
Score = 218 bits (471), Expect(2) = 2e-056
Identities = 101/129 (78%), Positives = 106/129 (82%)
Frame = +2 / -1
Query: 842 FKDSRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMR 1021
FKDSRSSP+RC H C+VS LAFSFLYSWHQ P +SDSAEIR FSA*E RS*RSRILS+
Sbjct: 669 FKDSRSSPMRCF*HFCIVSTLAFSFLYSWHQLP*VSDSAEIRTFSA*E*RS*RSRILSIH 490
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSCTLPRP
Sbjct: 489 ESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSCTLPRP 310
Query: 1202 IFACLRSLL 1228
IF LL
Sbjct: 309 IFLLFFLLL 283
Score = 133 bits (284), Expect(2) = 3e-043
Identities = 64/101 (63%), Positives = 76/101 (75%)
Frame = -3 / +1
Query: 1054 QGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GKLVPRIQETEGQN*DHTKMPQ 875
QGQALRVR RL +GQN TL*A+ LC KG YFS*I* G+LVPRI ETEG *D+T+M +
Sbjct: 457 QGQALRVRHRLMYGQNP*TL*ALLLCRKGPYFS*I*HSGQLVPRI*ETEG*G*DNTEMSK 636
Query: 874 APDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYGRVN 752
AP GRGS +FES+RA AAAG+ E +QI+KEP RV+
Sbjct: 637 APHGRGS*IFESQRAAAAGAAAGKFVETYQIQKEPTNARVH 759
Score = 98.2 bits (208), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / -3
Query: 763 HKVALS*SDVXXXXXXXXXXXXXXFWIQRL*ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
H +ALS SD+ F IQR ILSH+VL+ LY LN LQFP+FVAP++L
Sbjct: 748 H*LALSGSDMFQRIFQLLLQLLQLFEIQRFKILSHEVLLTFLYCLNLSLQFPIFVAPVAL 569
Query: 943 TFRFS*NKSLFSIGISLITF*NFVH 1017
+ RFS*NK LF IG++LITF +FVH
Sbjct: 568 SVRFS*NKDLFCIGVALITFKDFVH 494
Score = 86.3 bits (182), Expect(2) = 4e-027
Identities = 46/92 (50%), Positives = 52/92 (56%)
Frame = -2 / +3
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVREIGATNTGN*RPKLRPYKDATST*WERI*SL*IQ 837
WTK NVMS PM KR LFQLNL +R GATN GN*R +LR Y++ ST WERI +L*I
Sbjct: 495 WTKSLNVMSATPMQKRSLFQLNLTLRATGATNIGN*RLRLRQYRNVKSTSWERILNL*IS 674
Query: 836 KXXXXXXXXXXXXXXXSDQERATLWPSQFLSY 741
K SD ERA S S+
Sbjct: 675 KSCSSWSSSWKIR*NISDPERAN*CSSPLTSF 770
Score = 67.5 bits (141), Expect(2) = 3e-043
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 1234 ERKQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEG 1109
E ++ E EDGA QGAAEADREQD+PAGDLLQA AA+EG
Sbjct: 277 EEEEEEEQEEDGAGQGAAEADREQDQPAGDLLQAQVGAAQEG 402
Score = 60.2 bits (125), Expect(2) = 4e-027
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -2 / +3
Query: 1205 RWGAARCS*SG*RTR*TGR*PSPSAGTGC 1119
RWG ARCS*SG RTR TGR*PSPSAG GC
Sbjct: 306 RWGGARCS*SGSRTRSTGR*PSPSAGRGC 392
Score = 28.6 bits (56), Expect(2) = 3e-021
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 1108 RLLQQPVPALGEG 1146
RLL+QP PALGEG
Sbjct: 403 RLLEQPRPALGEG 365
Score = 26.3 bits (51), Expect(2) = 2e-056
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 752 IDSAIRWLFLDLM 790
+DS+I WLFLDL+
Sbjct: 759 MDSSISWLFLDLI 721
>gb|AACV01015031.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015031, whole
genome shotgun sequence
Length = 13398
Score = 149 bits (320), Expect(7) = 3e-078
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -1 / -1
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 12357 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 12178
Query: 1041 YEYASDSR 1018
YEYA+DSR
Sbjct: 12177 YEYATDSR 12154
Score = 124 bits (266), Expect(6) = 2e-051
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +2
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 12158 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 12337
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 12338 ILAARRS 12358
Score = 64.8 bits (135), Expect(5) = 1e-029
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3 / -3
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
++R+ +GEDGA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 12364 RRRAASGEDGAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 12242
Score = 62.9 bits (131), Expect(7) = 3e-078
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -1 / -2
Query: 1020 RMDKILERYERYSYAEKALISAESESE 940
RMDKILERYERYSYAEKALISAESESE
Sbjct: 9740 RMDKILERYERYSYAEKALISAESESE 9660
Score = 62.0 bits (129), Expect(7) = 3e-078
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = -1 / -1
Query: 942 EGNWCHEYRKLKAKIETIQRCHK 874
+GNWCHEYRKLKAKIETIQ+CHK
Sbjct: 8328 QGNWCHEYRKLKAKIETIQKCHK 8260
Score = 56.1 bits (116), Expect(7) = 3e-078
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -3 / -2
Query: 871 PDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
P GRGSR+ ES+R PT RAAAGE EAH IKK
Sbjct: 8108 PHGRGSRIPESQRTPTARAAAGEFIEAHNIKK 8013
Score = 51.9 bits (107), Expect(6) = 2e-051
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3 / +2
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
PH +IQLK*EPFQH N AHNV FCP
Sbjct: 9659 PHSRIQLK*EPFQHMNSAHNVQGFCP 9736
Score = 48.7 bits (100), Expect(6) = 2e-051
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / +2
Query: 881 HLCMVSILAFSFLYSWHQFP 940
H CMVSI A SFLYSWHQFP
Sbjct: 8267 HFCMVSIFALSFLYSWHQFP 8326
Score = 46.0 bits (94), Expect(5) = 1e-029
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / -1
Query: 1024 LPHGQNSRTL*AIFLC*KGSYFS*I*K*GK 935
L GQN TL*A+F+C*KGSYFS*I +*GK
Sbjct: 9744 LQDGQNP*TL*ALFIC*KGSYFS*IRE*GK 9655
Score = 42.3 bits (86), Expect(5) = 1e-029
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 941 REIGATNTGN*RPKLRPYKDATS 873
REIGA NTGN R +LRPYK+ TS
Sbjct: 8327 REIGAMNTGNLRQRLRPYKNVTS 8259
Score = 39.6 bits (80), Expect(7) = 3e-078
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / -1
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 6507 RIGGLPPWMLSHLNA* 6460
Score = 38.6 bits (78), Expect(5) = 1e-029
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / -3
Query: 436 PHRRSAAMDAEPPQRIRRAS 377
PHRRS+AMDAEPPQ +R +S
Sbjct: 6508 PHRRSSAMDAEPPQCLR*SS 6449
Score = 38.6 bits (78), Expect(5) = 1e-029
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -1 / -3
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHI SRK
Sbjct: 8113 RHLMGEDLESLNLKELQQLEQQLESSLKHIISRK 8012
Score = 38.2 bits (77), Expect(6) = 2e-051
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +2
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 6464 ALRWLSIHGGRPPMR 6508
Score = 38.2 bits (77), Expect(7) = 3e-078
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 735 KERSLQEENKALQKELSERQKAV 667
+ERSLQEENKALQKE+S R+ ++
Sbjct: 7461 QERSLQEENKALQKEVSCRKYSI 7393
Score = 34.5 bits (69), Expect(6) = 2e-051
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 533 QMFCGGGSPC*SCLIMKEEDDELVWTW 613
Q+FCGG S C*S + +EE+ W W
Sbjct: 6742 QIFCGGRSAC*SLSMEEEEELVWAWGW 6822
Score = 31.3 bits (62), Expect(7) = 3e-078
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 777 KSHLMAESISELQKK 733
+SHLM ESISELQKK
Sbjct: 7639 QSHLMLESISELQKK 7595
Score = 29.0 bits (57), Expect(6) = 2e-051
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 842 FKDSRSSPIRCL 877
F+DSRSSP+RCL
Sbjct: 8079 FRDSRSSPMRCL 8114
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1567_G09
Length = 121388
Score = 149 bits (320), Expect(7) = 1e-072
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -1 / -1
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 30404 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 30225
Query: 1041 YEYASDSR 1018
YEYA+DSR
Sbjct: 30224 YEYATDSR 30201
Score = 124 bits (266), Expect(6) = 6e-047
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 30205 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 30384
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 30385 ILAARRS 30405
Score = 64.8 bits (135), Expect(5) = 6e-026
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3 / -3
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
++R+ +GEDGA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 30411 RRRAASGEDGAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 30289
Score = 62.9 bits (131), Expect(7) = 1e-072
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -1 / -2
Query: 1020 RMDKILERYERYSYAEKALISAESESE 940
RMDKILERYERYSYAEKALISAESESE
Sbjct: 27787 RMDKILERYERYSYAEKALISAESESE 27707
Score = 62.0 bits (129), Expect(7) = 1e-072
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = -1 / -1
Query: 942 EGNWCHEYRKLKAKIETIQRCHK 874
+GNWCHEYRKLKAKIETIQ+CHK
Sbjct: 26375 QGNWCHEYRKLKAKIETIQKCHK 26307
Score = 56.1 bits (116), Expect(7) = 1e-072
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -3 / -2
Query: 871 PDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
P GRGSR+ ES+R PT RAAAGE EAH IKK
Sbjct: 26155 PHGRGSRIPESQRTPTARAAAGEFIEAHNIKK 26060
Score = 51.9 bits (107), Expect(6) = 6e-047
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
PH +IQLK*EPFQH N AHNV FCP
Sbjct: 27706 PHSRIQLK*EPFQHMNSAHNVQGFCP 27783
Score = 48.7 bits (100), Expect(6) = 6e-047
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 881 HLCMVSILAFSFLYSWHQFP 940
H CMVSI A SFLYSWHQFP
Sbjct: 26314 HFCMVSIFALSFLYSWHQFP 26373
Score = 46.0 bits (94), Expect(5) = 6e-026
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / -1
Query: 1024 LPHGQNSRTL*AIFLC*KGSYFS*I*K*GK 935
L GQN TL*A+F+C*KGSYFS*I +*GK
Sbjct: 27791 LQDGQNP*TL*ALFIC*KGSYFS*IRE*GK 27702
Score = 42.3 bits (86), Expect(5) = 6e-026
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 941 REIGATNTGN*RPKLRPYKDATS 873
REIGA NTGN R +LRPYK+ TS
Sbjct: 26374 REIGAMNTGNLRQRLRPYKNVTS 26306
Score = 39.6 bits (80), Expect(7) = 1e-072
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / -1
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 24554 RIGGLPPWMLSHLNA* 24507
Score = 38.6 bits (78), Expect(5) = 6e-026
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / -3
Query: 436 PHRRSAAMDAEPPQRIRRAS 377
PHRRS+AMDAEPPQ +R +S
Sbjct: 24555 PHRRSSAMDAEPPQCLR*SS 24496
Score = 38.6 bits (78), Expect(5) = 6e-026
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -1 / -3
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHI SRK
Sbjct: 26160 RHLMGEDLESLNLKELQQLEQQLESSLKHIISRK 26059
Score = 38.2 bits (77), Expect(7) = 1e-072
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 735 KERSLQEENKALQKELSERQKAV 667
+ERSLQEENKALQKE+S R+ ++
Sbjct: 25508 QERSLQEENKALQKEVSCRKYSI 25440
Score = 38.2 bits (77), Expect(6) = 6e-047
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 24511 ALRWLSIHGGRPPMR 24555
Score = 34.5 bits (69), Expect(6) = 6e-047
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 533 QMFCGGGSPC*SCLIMKEEDDELVWTW 613
Q+FCGG S C*S + +EE+ W W
Sbjct: 24789 QIFCGGRSAC*SLSMEEEEELVWAWGW 24869
Score = 31.3 bits (62), Expect(7) = 1e-072
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 777 KSHLMAESISELQKK 733
+SHLM ESISELQKK
Sbjct: 25686 QSHLMLESISELQKK 25642
Score = 29.0 bits (57), Expect(6) = 6e-047
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 842 FKDSRSSPIRCL 877
F+DSRSSP+RCL
Sbjct: 26126 FRDSRSSPMRCL 26161
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0585H11
Length = 149371
Score = 149 bits (320), Expect(7) = 5e-072
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -1 / -3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 78656 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 78477
Query: 1041 YEYASDSR 1018
YEYA+DSR
Sbjct: 78476 YEYATDSR 78453
Score = 124 bits (266), Expect(6) = 2e-046
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 78457 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 78636
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 78637 ILAARRS 78657
Score = 64.8 bits (135), Expect(5) = 1e-025
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3 / -2
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
++R+ +GEDGA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 78663 RRRAASGEDGAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 78541
Score = 62.9 bits (131), Expect(7) = 5e-072
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -1 / -1
Query: 1020 RMDKILERYERYSYAEKALISAESESE 940
RMDKILERYERYSYAEKALISAESESE
Sbjct: 76039 RMDKILERYERYSYAEKALISAESESE 75959
Score = 62.0 bits (129), Expect(7) = 5e-072
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = -1 / -3
Query: 942 EGNWCHEYRKLKAKIETIQRCHK 874
+GNWCHEYRKLKAKIETIQ+CHK
Sbjct: 74627 QGNWCHEYRKLKAKIETIQKCHK 74559
Score = 56.1 bits (116), Expect(7) = 5e-072
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -3 / -1
Query: 871 PDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
P GRGSR+ ES+R PT RAAAGE EAH IKK
Sbjct: 74407 PHGRGSRIPESQRTPTARAAAGEFIEAHNIKK 74312
Score = 51.9 bits (107), Expect(6) = 2e-046
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
PH +IQLK*EPFQH N AHNV FCP
Sbjct: 75958 PHSRIQLK*EPFQHMNSAHNVQGFCP 76035
Score = 48.7 bits (100), Expect(6) = 2e-046
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 881 HLCMVSILAFSFLYSWHQFP 940
H CMVSI A SFLYSWHQFP
Sbjct: 74566 HFCMVSIFALSFLYSWHQFP 74625
Score = 46.0 bits (94), Expect(5) = 1e-025
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / -3
Query: 1024 LPHGQNSRTL*AIFLC*KGSYFS*I*K*GK 935
L GQN TL*A+F+C*KGSYFS*I +*GK
Sbjct: 76043 LQDGQNP*TL*ALFIC*KGSYFS*IRE*GK 75954
Score = 42.3 bits (86), Expect(5) = 1e-025
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 941 REIGATNTGN*RPKLRPYKDATS 873
REIGA NTGN R +LRPYK+ TS
Sbjct: 74626 REIGAMNTGNLRQRLRPYKNVTS 74558
Score = 39.6 bits (80), Expect(7) = 5e-072
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / -3
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 72806 RIGGLPPWMLSHLNA* 72759
Score = 38.6 bits (78), Expect(5) = 1e-025
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / -2
Query: 436 PHRRSAAMDAEPPQRIRRAS 377
PHRRS+AMDAEPPQ +R +S
Sbjct: 72807 PHRRSSAMDAEPPQCLR*SS 72748
Score = 38.6 bits (78), Expect(5) = 1e-025
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -1 / -2
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHI SRK
Sbjct: 74412 RHLMGEDLESLNLKELQQLEQQLESSLKHIISRK 74311
Score = 38.2 bits (77), Expect(7) = 5e-072
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 735 KERSLQEENKALQKELSERQKAV 667
+ERSLQEENKALQKE+S R+ ++
Sbjct: 73760 QERSLQEENKALQKEVSCRKYSI 73692
Score = 38.2 bits (77), Expect(6) = 2e-046
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 72763 ALRWLSIHGGRPPMR 72807
Score = 34.5 bits (69), Expect(6) = 2e-046
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 533 QMFCGGGSPC*SCLIMKEEDDELVWTW 613
Q+FCGG S C*S + +EE+ W W
Sbjct: 73041 QIFCGGRSAC*SLSMEEEEELVWAWGW 73121
Score = 31.3 bits (62), Expect(7) = 5e-072
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 777 KSHLMAESISELQKK 733
+SHLM ESISELQKK
Sbjct: 73938 QSHLMLESISELQKK 73894
Score = 29.0 bits (57), Expect(6) = 2e-046
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 842 FKDSRSSPIRCL 877
F+DSRSSP+RCL
Sbjct: 74378 FRDSRSSPMRCL 74413
>gb|CH401218.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000055
genomic scaffold, whole genome shotgun sequence
Length = 1431804
Score = 149 bits (320), Expect(7) = 2e-066
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -1 / -3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 463063 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 462884
Query: 1041 YEYASDSR 1018
YEYA+DSR
Sbjct: 462883 YEYATDSR 462860
Score = 124 bits (266), Expect(5) = 2e-041
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +3
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 462864 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 463043
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 463044 ILAARRS 463064
Score = 64.8 bits (135), Expect(5) = 6e-022
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3 / -2
Query: 1228 KQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEGA 1106
++R+ +GEDGA +GAAEADREQD+ AGD+LQ E AEEGA
Sbjct: 463070 RRRAASGEDGAGEGAAEADREQDQQAGDVLQEEEWIAEEGA 462948
Score = 62.9 bits (131), Expect(7) = 2e-066
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -1 / -1
Query: 1020 RMDKILERYERYSYAEKALISAESESE 940
RMDKILERYERYSYAEKALISAESESE
Sbjct: 460446 RMDKILERYERYSYAEKALISAESESE 460366
Score = 62.0 bits (129), Expect(7) = 2e-066
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = -1 / -3
Query: 942 EGNWCHEYRKLKAKIETIQRCHK 874
+GNWCHEYRKLKAKIETIQ+CHK
Sbjct: 459034 QGNWCHEYRKLKAKIETIQKCHK 458966
Score = 56.1 bits (116), Expect(7) = 2e-066
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -3 / -1
Query: 871 PDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
P GRGSR+ ES+R PT RAAAGE EAH IKK
Sbjct: 458814 PHGRGSRIPESQRTPTARAAAGEFIEAHNIKK 458719
Score = 51.9 bits (107), Expect(5) = 2e-041
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3 / +3
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
PH +IQLK*EPFQH N AHNV FCP
Sbjct: 460365 PHSRIQLK*EPFQHMNSAHNVQGFCP 460442
Score = 48.7 bits (100), Expect(5) = 2e-041
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / +3
Query: 881 HLCMVSILAFSFLYSWHQFP 940
H CMVSI A SFLYSWHQFP
Sbjct: 458973 HFCMVSIFALSFLYSWHQFP 459032
Score = 46.0 bits (94), Expect(5) = 6e-022
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / -3
Query: 1024 LPHGQNSRTL*AIFLC*KGSYFS*I*K*GK 935
L GQN TL*A+F+C*KGSYFS*I +*GK
Sbjct: 460450 LQDGQNP*TL*ALFIC*KGSYFS*IRE*GK 460361
Score = 42.3 bits (86), Expect(5) = 6e-022
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 941 REIGATNTGN*RPKLRPYKDATS 873
REIGA NTGN R +LRPYK+ TS
Sbjct: 459033 REIGAMNTGNLRQRLRPYKNVTS 458965
Score = 39.6 bits (80), Expect(7) = 2e-066
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / -3
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 457213 RIGGLPPWMLSHLNA* 457166
Score = 38.6 bits (78), Expect(5) = 6e-022
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3 / -2
Query: 436 PHRRSAAMDAEPPQRIRRAS 377
PHRRS+AMDAEPPQ +R +S
Sbjct: 457214 PHRRSSAMDAEPPQCLR*SS 457155
Score = 38.6 bits (78), Expect(5) = 6e-022
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -1 / -2
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHI SRK
Sbjct: 458819 RHLMGEDLESLNLKELQQLEQQLESSLKHIISRK 458718
Score = 38.2 bits (77), Expect(7) = 2e-066
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 735 KERSLQEENKALQKELSERQKAV 667
+ERSLQEENKALQKE+S R+ ++
Sbjct: 458167 QERSLQEENKALQKEVSCRKYSI 458099
Score = 38.2 bits (77), Expect(5) = 2e-041
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 457170 ALRWLSIHGGRPPMR 457214
Score = 34.5 bits (69), Expect(5) = 2e-041
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +2
Query: 533 QMFCGGGSPC*SCLIMKEEDDELVWTW 613
Q+FCGG S C*S + +EE+ W W
Sbjct: 457448 QIFCGGRSAC*SLSMEEEEELVWAWGW 457528
Score = 31.3 bits (62), Expect(7) = 2e-066
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 777 KSHLMAESISELQKK 733
+SHLM ESISELQKK
Sbjct: 458345 QSHLMLESISELQKK 458301
>ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1088
Score = 240 bits (519), Expect = 2e-061
Identities = 103/170 (60%), Positives = 131/170 (77%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDA+VA+IVFS KGKLYE++S
Sbjct: 90 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 269
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESL 844
S M+ ILERY+RYS+ E+A++ +E + NW EY LK+K++ +Q+ + L+GE L++L
Sbjct: 270 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 449
Query: 843 NPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
K LKHIRS+K+ L+ ESISELQKKE+SL+ +N LQK
Sbjct: 450 TIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK 599
Score = 134 bits (287), Expect = 2e-029
Identities = 73/118 (61%), Positives = 76/118 (64%)
Frame = +2 / -2
Query: 851 SRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESE 1030
S SP CLW S L F YS QF S A S+ E R *RSRI S+ E
Sbjct: 442 SNCSPKSCLWLF*SASSLDFKIPYSSPQFSWSSVFGSSTALSSNE*RW*RSRIPSILEWL 263
Query: 1031 AYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
S*SLPL EKTM+ATSASQ TEISCAFFSSPF RLEKVTC FILFSIR SCT P PI
Sbjct: 262 ENS*SLPLVEKTMSATSASQSTEISCAFFSSPFLRLEKVTCLFILFSIRRSCTGPLPI 89
>emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box protein
Length = 974
Score = 240 bits (519), Expect = 2e-061
Identities = 103/170 (60%), Positives = 131/170 (77%)
Frame = -1 / +2
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDA+VA+IVFS KGKLYE++S
Sbjct: 77 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 256
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESL 844
S M+ ILERY+RYS+ E+A++ +E + NW EY LK+K++ +Q+ + L+GE L++L
Sbjct: 257 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 436
Query: 843 NPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
K LKHIRS+K+ L+ ESISELQKKE+SL+ +N LQK
Sbjct: 437 TIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK 586
Score = 134 bits (287), Expect = 2e-029
Identities = 73/118 (61%), Positives = 76/118 (64%)
Frame = +2 / -3
Query: 851 SRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESE 1030
S SP CLW S L F YS QF S A S+ E R *RSRI S+ E
Sbjct: 429 SNCSPKSCLWLF*SASSLDFKIPYSSPQFSWSSVFGSSTALSSNE*RW*RSRIPSILEWL 250
Query: 1031 AYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
S*SLPL EKTM+ATSASQ TEISCAFFSSPF RLEKVTC FILFSIR SCT P PI
Sbjct: 249 ENS*SLPLVEKTMSATSASQSTEISCAFFSSPFLRLEKVTCLFILFSIRRSCTGPLPI 76
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 149 bits (320), Expect(6) = 6e-061
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -1 / -2
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 470429 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 470250
Query: 1041 YEYASDSR 1018
YEYA+DSR
Sbjct: 470249 YEYATDSR 470226
Score = 124 bits (266), Expect(5) = 5e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 470230 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 470409
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 470410 ILAARRS 470430
Score = 62.9 bits (131), Expect(6) = 6e-061
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -1 / -3
Query: 1020 RMDKILERYERYSYAEKALISAESESE 940
RMDKILERYERYSYAEKALISAESESE
Sbjct: 467812 RMDKILERYERYSYAEKALISAESESE 467732
Score = 62.0 bits (129), Expect(6) = 6e-061
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = -1 / -2
Query: 942 EGNWCHEYRKLKAKIETIQRCHK 874
+GNWCHEYRKLKAKIETIQ+CHK
Sbjct: 466400 QGNWCHEYRKLKAKIETIQKCHK 466332
Score = 56.1 bits (116), Expect(6) = 6e-061
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -3 / -3
Query: 871 PDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
P GRGSR+ ES+R PT RAAAGE EAH IKK
Sbjct: 466180 PHGRGSRIPESQRTPTARAAAGEFIEAHNIKK 466085
Score = 51.9 bits (107), Expect(5) = 5e-038
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
PH +IQLK*EPFQH N AHNV FCP
Sbjct: 467731 PHSRIQLK*EPFQHMNSAHNVQGFCP 467808
Score = 48.7 bits (100), Expect(5) = 5e-038
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 881 HLCMVSILAFSFLYSWHQFP 940
H CMVSI A SFLYSWHQFP
Sbjct: 466339 HFCMVSIFALSFLYSWHQFP 466398
Score = 39.6 bits (80), Expect(6) = 6e-061
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / -2
Query: 435 RIAGLPPWMLSHLNA* 388
RI GLPPWMLSHLNA*
Sbjct: 464579 RIGGLPPWMLSHLNA* 464532
Score = 38.2 bits (77), Expect(6) = 6e-061
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 735 KERSLQEENKALQKELSERQKAV 667
+ERSLQEENKALQKE+S R+ ++
Sbjct: 465533 QERSLQEENKALQKEVSCRKYSI 465465
Score = 38.2 bits (77), Expect(5) = 5e-038
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 392 ALRWLSIHGGRPAMR 436
ALRWLSIHGGRP MR
Sbjct: 464536 ALRWLSIHGGRPPMR 464580
Score = 34.5 bits (69), Expect(5) = 5e-038
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 533 QMFCGGGSPC*SCLIMKEEDDELVWTW 613
Q+FCGG S C*S + +EE+ W W
Sbjct: 464814 QIFCGGRSAC*SLSMEEEEELVWAWGW 464894
>dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A02, full
insert sequence
Length = 1088
Score = 238 bits (514), Expect = 1e-060
Identities = 102/170 (60%), Positives = 130/170 (76%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDA+VA+IVFS KGKLYE++S
Sbjct: 90 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 269
Query: 1023 SRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESL 844
S M+ ILERY+RYS+ E+A++ +E + NW EY LK+K++ +Q+ + L+GE L++L
Sbjct: 270 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 449
Query: 843 NPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
K LKHIRS+K+ L+ ESI ELQKKE+SL+ +N LQK
Sbjct: 450 TIKELQQLEHQLEYSLKHIRSKKNQLLFESIPELQKKEKSLKNQNNVLQK 599
Score = 134 bits (287), Expect = 2e-029
Identities = 73/118 (61%), Positives = 76/118 (64%)
Frame = +2 / -2
Query: 851 SRSSPIRCLWHLCMVSILAFSFLYSWHQFPSLSDSAEIRAFSA*EYRS*RSRILSMRESE 1030
S SP CLW S L F YS QF S A S+ E R *RSRI S+ E
Sbjct: 442 SNCSPKSCLWLF*SASSLDFKIPYSSPQFSWSSVFGSSTALSSNE*RW*RSRIPSILEWL 263
Query: 1031 AYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
S*SLPL EKTM+ATSASQ TEISCAFFSSPF RLEKVTC FILFSIR SCT P PI
Sbjct: 262 ENS*SLPLVEKTMSATSASQSTEISCAFFSSPFLRLEKVTCLFILFSIRRSCTGPLPI 89
>gb|AACV01007934.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007934, whole
genome shotgun sequence
Length = 56956
Score = 134 bits (288), Expect(6) = 4e-059
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = -1 / -2
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 13422 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 13243
Query: 1044 LYEYASDS 1021
LYEYA+DS
Sbjct: 13242 LYEYATDS 13219
Score = 115 bits (245), Expect(5) = 2e-036
Identities = 45/66 (68%), Positives = 61/66 (92%)
Frame = -1 / -1
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 26887 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 26708
Query: 1035 YASDSR 1018
++S S+
Sbjct: 26707 FSSSSK 26690
Score = 114 bits (243), Expect(5) = 5e-038
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +2 / +2
Query: 1007 ILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSC 1186
+ + ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSC
Sbjct: 13205 VRTYHESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSC 13384
Query: 1187 TLPRPIFACLRSLL 1228
TLPRPIF LL
Sbjct: 13385 TLPRPIFLLFFLLL 13426
Score = 78.0 bits (164), Expect(4) = 1e-022
Identities = 37/52 (71%), Positives = 37/52 (71%)
Frame = +2 / +3
Query: 1049 PLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
P EK ATSASQR E S AF S PFRRL VTCR ILFSIR S TLPRPI
Sbjct: 26721 PAWEKRTRATSASQRMESS*AFLSRPFRRLANVTCRLILFSIR*STTLPRPI 26876
Score = 57.0 bits (118), Expect(6) = 4e-059
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -1 / -2
Query: 939 GNWCHEYRKLKAKIETIQRCHK 874
GNWCHEYRKLKAK+ETIQ+C K
Sbjct: 5724 GNWCHEYRKLKAKVETIQKCQK 5659
Score = 54.7 bits (113), Expect(6) = 4e-059
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1 / -3
Query: 1017 MDKILERYERYSYAEKALISAESESE 940
MDKILERYERYSYAEK LISAES+++
Sbjct: 7961 MDKILERYERYSYAEKVLISAESDTQ 7884
Score = 47.8 bits (98), Expect(6) = 4e-059
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3 / -2
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
QAP GRGS +FES+RA AAAG+ E +QI+K
Sbjct: 5574 QAPHGRGS*IFESQRAAAAGAAAGKFVETYQIQK 5473
Score = 46.9 bits (96), Expect(5) = 5e-038
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 881 HLCMVSILAFSFLYSWHQFPSLS 949
H C+VS LAFSFLYSWHQ P S
Sbjct: 5666 HFCIVSTLAFSFLYSWHQLPYTS 5734
Score = 44.1 bits (90), Expect(5) = 5e-038
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3 / +2
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
P QIQLK* PF HR+ AHNV FCP
Sbjct: 7883 PECQIQLK*GPFLHRSSAHNVQGFCP 7960
Score = 43.2 bits (88), Expect(4) = 1e-022
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1 / +3
Query: 940 LTFRFS*NKSLFSIGISLITF*NFVH 1017
L+ RFS*NK LF IG++LITF +FVH
Sbjct: 7884 LSVRFS*NKDLFCIGVALITFKDFVH 7961
Score = 41.8 bits (85), Expect(5) = 2e-036
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHIRSRK
Sbjct: 5573 RHLMGEDLESLNLKELQQLEQQLENSLKHIRSRK 5472
Score = 41.8 bits (85), Expect(4) = 1e-022
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1 / +1
Query: 856 ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
+ S Q+L+ LY LN LQFP+FVAP++L
Sbjct: 5641 VSSFQLLLTFLYCLNLSLQFPIFVAPVAL 5727
Score = 40.9 bits (83), Expect(5) = 2e-036
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVR 939
WTK NVMS PM KR LFQLNL +R
Sbjct: 7960 WTKSLNVMSATPMQKRSLFQLNLTLR 7883
Score = 38.2 bits (77), Expect(6) = 4e-059
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 4260 GLPPWMLSHING*GG 4216
Score = 32.7 bits (65), Expect(5) = 2e-036
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 4280 SHSMFALGCHHGC*ATSTAKE 4218
Score = 31.8 bits (63), Expect(5) = 2e-036
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 940 GKLVPRIQETEGQN*DHTKM 881
G+LVPRI ETEG *D+T+M
Sbjct: 5725 GQLVPRI*ETEG*G*DNTEM 5666
Score = 31.8 bits (63), Expect(5) = 5e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 4214 KPP*PLMWLSIHGGSP 4261
Score = 31.3 bits (62), Expect(6) = 4e-059
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1 / -2
Query: 735 KERSLQEENKALQKEL 688
+E+SLQEENK LQKE+
Sbjct: 5088 QEKSLQEENKVLQKEV 5041
Score = 30.9 bits (61), Expect(5) = 5e-038
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 842 FKDSRSSPIRCLWHL 886
FKDSRSSP+RCL L
Sbjct: 5539 FKDSRSSPMRCLQDL 5583
Score = 28.1 bits (55), Expect(4) = 1e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 385 SLCVEVAQHPWRQ 423
SL V+VAQHPW Q
Sbjct: 4219 SLAVDVAQHPWWQ 4257
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
sequence
Length = 128294
Score = 134 bits (288), Expect(6) = 2e-057
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = -1 / -2
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 57520 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 57341
Query: 1044 LYEYASDS 1021
LYEYA+DS
Sbjct: 57340 LYEYATDS 57317
Score = 115 bits (245), Expect(5) = 4e-035
Identities = 45/66 (68%), Positives = 61/66 (92%)
Frame = -1 / -2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 70984 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 70805
Query: 1035 YASDSR 1018
++S S+
Sbjct: 70804 FSSSSK 70787
Score = 114 bits (243), Expect(5) = 1e-036
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +2 / +3
Query: 1007 ILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSC 1186
+ + ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSC
Sbjct: 57303 VRTYHESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSC 57482
Query: 1187 TLPRPIFACLRSLL 1228
TLPRPIF LL
Sbjct: 57483 TLPRPIFLLFFLLL 57524
Score = 78.0 bits (164), Expect(4) = 1e-021
Identities = 37/52 (71%), Positives = 37/52 (71%)
Frame = +2 / +3
Query: 1049 PLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
P EK ATSASQR E S AF S PFRRL VTCR ILFSIR S TLPRPI
Sbjct: 70818 PAWEKRTRATSASQRMESS*AFLSRPFRRLANVTCRLILFSIR*STTLPRPI 70973
Score = 57.0 bits (118), Expect(6) = 2e-057
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -1 / -2
Query: 939 GNWCHEYRKLKAKIETIQRCHK 874
GNWCHEYRKLKAK+ETIQ+C K
Sbjct: 49822 GNWCHEYRKLKAKVETIQKCQK 49757
Score = 54.7 bits (113), Expect(6) = 2e-057
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1 / -3
Query: 1017 MDKILERYERYSYAEKALISAESESE 940
MDKILERYERYSYAEK LISAES+++
Sbjct: 52059 MDKILERYERYSYAEKVLISAESDTQ 51982
Score = 47.8 bits (98), Expect(6) = 2e-057
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3 / -2
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
QAP GRGS +FES+RA AAAG+ E +QI+K
Sbjct: 49672 QAPHGRGS*IFESQRAAAAGAAAGKFVETYQIQK 49571
Score = 46.9 bits (96), Expect(5) = 1e-036
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 881 HLCMVSILAFSFLYSWHQFPSLS 949
H C+VS LAFSFLYSWHQ P S
Sbjct: 49764 HFCIVSTLAFSFLYSWHQLPYTS 49832
Score = 44.1 bits (90), Expect(5) = 1e-036
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3 / +3
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
P QIQLK* PF HR+ AHNV FCP
Sbjct: 51981 PECQIQLK*GPFLHRSSAHNVQGFCP 52058
Score = 43.2 bits (88), Expect(4) = 1e-021
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1 / +1
Query: 940 LTFRFS*NKSLFSIGISLITF*NFVH 1017
L+ RFS*NK LF IG++LITF +FVH
Sbjct: 51982 LSVRFS*NKDLFCIGVALITFKDFVH 52059
Score = 41.8 bits (85), Expect(5) = 4e-035
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHIRSRK
Sbjct: 49671 RHLMGEDLESLNLKELQQLEQQLENSLKHIRSRK 49570
Score = 41.8 bits (85), Expect(4) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1 / +2
Query: 856 ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
+ S Q+L+ LY LN LQFP+FVAP++L
Sbjct: 49739 VSSFQLLLTFLYCLNLSLQFPIFVAPVAL 49825
Score = 40.9 bits (83), Expect(5) = 4e-035
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVR 939
WTK NVMS PM KR LFQLNL +R
Sbjct: 52058 WTKSLNVMSATPMQKRSLFQLNLTLR 51981
Score = 38.2 bits (77), Expect(6) = 2e-057
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 48358 GLPPWMLSHING*GG 48314
Score = 32.7 bits (65), Expect(5) = 4e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 48378 SHSMFALGCHHGC*ATSTAKE 48316
Score = 31.8 bits (63), Expect(5) = 4e-035
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 940 GKLVPRIQETEGQN*DHTKM 881
G+LVPRI ETEG *D+T+M
Sbjct: 49823 GQLVPRI*ETEG*G*DNTEM 49764
Score = 31.8 bits (63), Expect(5) = 1e-036
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 48312 KPP*PLMWLSIHGGSP 48359
Score = 31.3 bits (62), Expect(6) = 2e-057
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1 / -2
Query: 735 KERSLQEENKALQKEL 688
+E+SLQEENK LQKE+
Sbjct: 49186 QEKSLQEENKVLQKEV 49139
Score = 30.9 bits (61), Expect(5) = 1e-036
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 842 FKDSRSSPIRCLWHL 886
FKDSRSSP+RCL L
Sbjct: 49637 FKDSRSSPMRCLQDL 49681
Score = 28.1 bits (55), Expect(4) = 1e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 385 SLCVEVAQHPWRQ 423
SL V+VAQHPW Q
Sbjct: 48317 SLAVDVAQHPWWQ 48355
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
OSJNBa0032E21, complete sequence
Length = 137580
Score = 134 bits (288), Expect(6) = 3e-057
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = -1 / +1
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 54964 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 55143
Query: 1044 LYEYASDS 1021
LYEYA+DS
Sbjct: 55144 LYEYATDS 55167
Score = 115 bits (245), Expect(5) = 5e-035
Identities = 45/66 (68%), Positives = 61/66 (92%)
Frame = -1 / +1
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 41500 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 41679
Query: 1035 YASDSR 1018
++S S+
Sbjct: 41680 FSSSSK 41697
Score = 114 bits (243), Expect(5) = 1e-036
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +2 / -2
Query: 1007 ILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSC 1186
+ + ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSC
Sbjct: 55181 VRTYHESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSC 55002
Query: 1187 TLPRPIFACLRSLL 1228
TLPRPIF LL
Sbjct: 55001 TLPRPIFLLFFLLL 54960
Score = 78.0 bits (164), Expect(4) = 1e-021
Identities = 37/52 (71%), Positives = 37/52 (71%)
Frame = +2 / -2
Query: 1049 PLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
P EK ATSASQR E S AF S PFRRL VTCR ILFSIR S TLPRPI
Sbjct: 41666 PAWEKRTRATSASQRMESS*AFLSRPFRRLANVTCRLILFSIR*STTLPRPI 41511
Score = 57.0 bits (118), Expect(6) = 3e-057
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -1 / +1
Query: 939 GNWCHEYRKLKAKIETIQRCHK 874
GNWCHEYRKLKAK+ETIQ+C K
Sbjct: 62662 GNWCHEYRKLKAKVETIQKCQK 62727
Score = 54.7 bits (113), Expect(6) = 3e-057
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1 / +2
Query: 1017 MDKILERYERYSYAEKALISAESESE 940
MDKILERYERYSYAEK LISAES+++
Sbjct: 60425 MDKILERYERYSYAEKVLISAESDTQ 60502
Score = 47.8 bits (98), Expect(6) = 3e-057
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3 / +1
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
QAP GRGS +FES+RA AAAG+ E +QI+K
Sbjct: 62812 QAPHGRGS*IFESQRAAAAGAAAGKFVETYQIQK 62913
Score = 46.9 bits (96), Expect(5) = 1e-036
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / -2
Query: 881 HLCMVSILAFSFLYSWHQFPSLS 949
H C+VS LAFSFLYSWHQ P S
Sbjct: 62720 HFCIVSTLAFSFLYSWHQLPYTS 62652
Score = 44.1 bits (90), Expect(5) = 1e-036
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3 / -2
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
P QIQLK* PF HR+ AHNV FCP
Sbjct: 60503 PECQIQLK*GPFLHRSSAHNVQGFCP 60426
Score = 43.2 bits (88), Expect(4) = 1e-021
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1 / -3
Query: 940 LTFRFS*NKSLFSIGISLITF*NFVH 1017
L+ RFS*NK LF IG++LITF +FVH
Sbjct: 60502 LSVRFS*NKDLFCIGVALITFKDFVH 60425
Score = 41.8 bits (85), Expect(4) = 1e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1 / -1
Query: 856 ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
+ S Q+L+ LY LN LQFP+FVAP++L
Sbjct: 62745 VSSFQLLLTFLYCLNLSLQFPIFVAPVAL 62659
Score = 41.8 bits (85), Expect(5) = 5e-035
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1 / +2
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHIRSRK
Sbjct: 62813 RHLMGEDLESLNLKELQQLEQQLENSLKHIRSRK 62914
Score = 40.9 bits (83), Expect(5) = 5e-035
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / +3
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVR 939
WTK NVMS PM KR LFQLNL +R
Sbjct: 60426 WTKSLNVMSATPMQKRSLFQLNLTLR 60503
Score = 38.2 bits (77), Expect(6) = 3e-057
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 64126 GLPPWMLSHING*GG 64170
Score = 32.7 bits (65), Expect(5) = 5e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +2
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 64106 SHSMFALGCHHGC*ATSTAKE 64168
Score = 31.8 bits (63), Expect(5) = 1e-036
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 64172 KPP*PLMWLSIHGGSP 64125
Score = 31.8 bits (63), Expect(5) = 5e-035
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3 / +3
Query: 940 GKLVPRIQETEGQN*DHTKM 881
G+LVPRI ETEG *D+T+M
Sbjct: 62661 GQLVPRI*ETEG*G*DNTEM 62720
Score = 31.3 bits (62), Expect(6) = 3e-057
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1 / +1
Query: 735 KERSLQEENKALQKEL 688
+E+SLQEENK LQKE+
Sbjct: 63298 QEKSLQEENKVLQKEV 63345
Score = 30.9 bits (61), Expect(5) = 1e-036
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 842 FKDSRSSPIRCLWHL 886
FKDSRSSP+RCL L
Sbjct: 62847 FKDSRSSPMRCLQDL 62803
Score = 28.1 bits (55), Expect(4) = 1e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 385 SLCVEVAQHPWRQ 423
SL V+VAQHPW Q
Sbjct: 64167 SLAVDVAQHPWWQ 64129
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
sequence
Length = 157970
Score = 134 bits (288), Expect(6) = 5e-057
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = -1 / +3
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 13572 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 13751
Query: 1044 LYEYASDS 1021
LYEYA+DS
Sbjct: 13752 LYEYATDS 13775
Score = 115 bits (245), Expect(5) = 9e-035
Identities = 45/66 (68%), Positives = 61/66 (92%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 108 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 287
Query: 1035 YASDSR 1018
++S S+
Sbjct: 288 FSSSSK 305
Score = 114 bits (243), Expect(5) = 2e-036
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +2 / -2
Query: 1007 ILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSC 1186
+ + ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSC
Sbjct: 13789 VRTYHESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSC 13610
Query: 1187 TLPRPIFACLRSLL 1228
TLPRPIF LL
Sbjct: 13609 TLPRPIFLLFFLLL 13568
Score = 78.0 bits (164), Expect(4) = 2e-021
Identities = 37/52 (71%), Positives = 37/52 (71%)
Frame = +2 / -2
Query: 1049 PLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRPI 1204
P EK ATSASQR E S AF S PFRRL VTCR ILFSIR S TLPRPI
Sbjct: 274 PAWEKRTRATSASQRMESS*AFLSRPFRRLANVTCRLILFSIR*STTLPRPI 119
Score = 57.0 bits (118), Expect(6) = 5e-057
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -1 / +2
Query: 939 GNWCHEYRKLKAKIETIQRCHK 874
GNWCHEYRKLKAK+ETIQ+C K
Sbjct: 21269 GNWCHEYRKLKAKVETIQKCQK 21334
Score = 54.7 bits (113), Expect(6) = 5e-057
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1 / +1
Query: 1017 MDKILERYERYSYAEKALISAESESE 940
MDKILERYERYSYAEK LISAES+++
Sbjct: 19033 MDKILERYERYSYAEKVLISAESDTQ 19110
Score = 47.8 bits (98), Expect(6) = 5e-057
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
QAP GRGS +FES+RA AAAG+ E +QI+K
Sbjct: 21419 QAPHGRGS*IFESQRAAAAGAAAGKFVETYQIQK 21520
Score = 46.9 bits (96), Expect(5) = 2e-036
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / -3
Query: 881 HLCMVSILAFSFLYSWHQFPSLS 949
H C+VS LAFSFLYSWHQ P S
Sbjct: 21327 HFCIVSTLAFSFLYSWHQLPYTS 21259
Score = 44.1 bits (90), Expect(5) = 2e-036
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3 / -2
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
P QIQLK* PF HR+ AHNV FCP
Sbjct: 19111 PECQIQLK*GPFLHRSSAHNVQGFCP 19034
Score = 43.2 bits (88), Expect(4) = 2e-021
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1 / -3
Query: 940 LTFRFS*NKSLFSIGISLITF*NFVH 1017
L+ RFS*NK LF IG++LITF +FVH
Sbjct: 19110 LSVRFS*NKDLFCIGVALITFKDFVH 19033
Score = 41.8 bits (85), Expect(4) = 2e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1 / -2
Query: 856 ILSHQVLVASLYGLNFGLQFPVFVAPISL 942
+ S Q+L+ LY LN LQFP+FVAP++L
Sbjct: 21352 VSSFQLLLTFLYCLNLSLQFPIFVAPVAL 21266
Score = 41.8 bits (85), Expect(5) = 9e-035
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1 / +3
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHIRSRK
Sbjct: 21420 RHLMGEDLESLNLKELQQLEQQLENSLKHIRSRK 21521
Score = 40.9 bits (83), Expect(5) = 9e-035
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / +2
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVR 939
WTK NVMS PM KR LFQLNL +R
Sbjct: 19034 WTKSLNVMSATPMQKRSLFQLNLTLR 19111
Score = 38.2 bits (77), Expect(6) = 5e-057
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 22733 GLPPWMLSHING*GG 22777
Score = 32.7 bits (65), Expect(5) = 9e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +3
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 22713 SHSMFALGCHHGC*ATSTAKE 22775
Score = 31.8 bits (63), Expect(5) = 2e-036
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 22779 KPP*PLMWLSIHGGSP 22732
Score = 31.8 bits (63), Expect(5) = 9e-035
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3 / +1
Query: 940 GKLVPRIQETEGQN*DHTKM 881
G+LVPRI ETEG *D+T+M
Sbjct: 21268 GQLVPRI*ETEG*G*DNTEM 21327
Score = 31.3 bits (62), Expect(6) = 5e-057
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 735 KERSLQEENKALQKEL 688
+E+SLQEENK LQKE+
Sbjct: 21905 QEKSLQEENKVLQKEV 21952
Score = 30.9 bits (61), Expect(5) = 2e-036
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / -2
Query: 842 FKDSRSSPIRCLWHL 886
FKDSRSSP+RCL L
Sbjct: 21454 FKDSRSSPMRCLQDL 21410
Score = 28.1 bits (55), Expect(4) = 2e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -2
Query: 385 SLCVEVAQHPWRQ 423
SL V+VAQHPW Q
Sbjct: 22774 SLAVDVAQHPWWQ 22736
>ref|NT_107186.1| Oryza sativa (japonica cultivar-group)
Length = 215173
Score = 134 bits (288), Expect(6) = 2e-056
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = -1 / -2
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 144399 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 144220
Query: 1044 LYEYASDS 1021
LYEYA+DS
Sbjct: 144219 LYEYATDS 144196
Score = 115 bits (245), Expect(5) = 3e-034
Identities = 45/66 (68%), Positives = 61/66 (92%)
Frame = -1 / -2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 157863 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 157684
Query: 1035 YASDSR 1018
++S S+
Sbjct: 157683 FSSSSK 157666
Score = 114 bits (243), Expect(5) = 7e-036
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +2 / +2
Query: 1007 ILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSC 1186
+ + ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSC
Sbjct: 144182 VRTYHESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSC 144361
Query: 1187 TLPRPIFACLRSLL 1228
TLPRPIF LL
Sbjct: 144362 TLPRPIFLLFFLLL 144403
Score = 57.0 bits (118), Expect(6) = 2e-056
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -1 / -1
Query: 939 GNWCHEYRKLKAKIETIQRCHK 874
GNWCHEYRKLKAK+ETIQ+C K
Sbjct: 136702 GNWCHEYRKLKAKVETIQKCQK 136637
Score = 54.7 bits (113), Expect(6) = 2e-056
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1 / -3
Query: 1017 MDKILERYERYSYAEKALISAESESE 940
MDKILERYERYSYAEK LISAES+++
Sbjct: 138938 MDKILERYERYSYAEKVLISAESDTQ 138861
Score = 47.8 bits (98), Expect(6) = 2e-056
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3 / -1
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
QAP GRGS +FES+RA AAAG+ E +QI+K
Sbjct: 136552 QAPHGRGS*IFESQRAAAAGAAAGKFVETYQIQK 136451
Score = 46.9 bits (96), Expect(5) = 7e-036
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 881 HLCMVSILAFSFLYSWHQFPSLS 949
H C+VS LAFSFLYSWHQ P S
Sbjct: 136644 HFCIVSTLAFSFLYSWHQLPYTS 136712
Score = 44.1 bits (90), Expect(5) = 7e-036
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3 / +2
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
P QIQLK* PF HR+ AHNV FCP
Sbjct: 138860 PECQIQLK*GPFLHRSSAHNVQGFCP 138937
Score = 41.8 bits (85), Expect(5) = 3e-034
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1 / -2
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHIRSRK
Sbjct: 136551 RHLMGEDLESLNLKELQQLEQQLENSLKHIRSRK 136450
Score = 40.9 bits (83), Expect(5) = 3e-034
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -1
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVR 939
WTK NVMS PM KR LFQLNL +R
Sbjct: 138937 WTKSLNVMSATPMQKRSLFQLNLTLR 138860
Score = 38.2 bits (77), Expect(6) = 2e-056
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 135238 GLPPWMLSHING*GG 135194
Score = 32.7 bits (65), Expect(5) = 3e-034
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 446 NHSSASQVCRHGC*ATSTHKE 384
+HS + C HGC*ATST KE
Sbjct: 135258 SHSMFALGCHHGC*ATSTAKE 135196
Score = 31.8 bits (63), Expect(5) = 7e-036
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 380 RPPYALRWLSIHGGRP 427
+PP L WLSIHGG P
Sbjct: 135192 KPP*PLMWLSIHGGSP 135239
Score = 31.8 bits (63), Expect(5) = 3e-034
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3 / -3
Query: 940 GKLVPRIQETEGQN*DHTKM 881
G+LVPRI ETEG *D+T+M
Sbjct: 136703 GQLVPRI*ETEG*G*DNTEM 136644
Score = 31.3 bits (62), Expect(6) = 2e-056
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1 / -1
Query: 735 KERSLQEENKALQKEL 688
+E+SLQEENK LQKE+
Sbjct: 136066 QEKSLQEENKVLQKEV 136019
Score = 30.9 bits (61), Expect(5) = 7e-036
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 842 FKDSRSSPIRCLWHL 886
FKDSRSSP+RCL L
Sbjct: 136517 FKDSRSSPMRCLQDL 136561
>dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:E31254
Length = 1175
Score = 200 bits (431), Expect = 3e-049
Identities = 86/178 (48%), Positives = 125/178 (70%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 248 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 427
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
++S S M K LERY+RY YA + + S+ N EY LKA +E +Q+ ++L+GED
Sbjct: 428 FSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGED 607
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSE 682
L L LK IRSRK+ ++ + + +L++KE+ LQ+ N+ L+++L E
Sbjct: 608 LAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 781
>gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS217
mRNA, complete cds
Length = 1028
Score = 200 bits (431), Expect = 3e-049
Identities = 86/178 (48%), Positives = 125/178 (70%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 108 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 287
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
++S S M K LERY+RY YA + + S+ N EY LKA +E +Q+ ++L+GED
Sbjct: 288 FSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGED 467
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSE 682
L L LK IRSRK+ ++ + + +L++KE+ LQ+ N+ L+++L E
Sbjct: 468 LAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 641
>ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 839
Score = 200 bits (431), Expect = 3e-049
Identities = 86/178 (48%), Positives = 125/178 (70%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 108 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 287
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
++S S M K LERY+RY YA + + S+ N EY LKA +E +Q+ ++L+GED
Sbjct: 288 FSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGED 467
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSE 682
L L LK IRSRK+ ++ + + +L++KE+ LQ+ N+ L+++L E
Sbjct: 468 LAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 641
>gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS212
mRNA, complete cds
Length = 1095
Score = 198 bits (427), Expect = 1e-048
Identities = 87/184 (47%), Positives = 125/184 (67%)
Frame = -1 / +3
Query: 1233 KGSRDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSP 1054
K +R MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS
Sbjct: 72 KRDLEREIEMMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSH 251
Query: 1053 KGKLYEYASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHK 874
G+LY+++S S M K LERY+RY YA + + S+ N EY LKA +E +Q+ +
Sbjct: 252 AGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQR 431
Query: 873 HLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
+L+GEDL L LK IRSRK+ ++ + + +L++KE+ LQ+ N+ L++
Sbjct: 432 NLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKR 611
Query: 693 ELSE 682
+L E
Sbjct: 612 KLDE 623
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 134 bits (288), Expect(5) = 3e-048
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = -1 / -3
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 4402414 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 4402235
Query: 1044 LYEYASDS 1021
LYEYA+DS
Sbjct: 4402234 LYEYATDS 4402211
Score = 115 bits (245), Expect(3) = 2e-027
Identities = 45/66 (68%), Positives = 61/66 (92%)
Frame = -1 / -2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 4415879 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 4415700
Query: 1035 YASDSR 1018
++S S+
Sbjct: 4415699 FSSSSK 4415682
Score = 114 bits (243), Expect(3) = 1e-029
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +2 / +3
Query: 1007 ILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSC 1186
+ + ES AYS*SLPL EK M+ATSASQ TEIS AF SSP RLEKVTCR ILFSIRFSC
Sbjct: 4402197 VRTYHESVAYS*SLPLVEKMMSATSASQSTEISFAFLSSPDLRLEKVTCRLILFSIRFSC 4402376
Query: 1187 TLPRPIFACLRSLL 1228
TLPRPIF LL
Sbjct: 4402377 TLPRPIFLLFFLLL 4402418
Score = 57.0 bits (118), Expect(5) = 3e-048
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -1 / -3
Query: 939 GNWCHEYRKLKAKIETIQRCHK 874
GNWCHEYRKLKAK+ETIQ+C K
Sbjct: 4394716 GNWCHEYRKLKAKVETIQKCQK 4394651
Score = 54.7 bits (113), Expect(5) = 3e-048
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1 / -1
Query: 1017 MDKILERYERYSYAEKALISAESESE 940
MDKILERYERYSYAEK LISAES+++
Sbjct: 4396953 MDKILERYERYSYAEKVLISAESDTQ 4396876
Score = 47.8 bits (98), Expect(5) = 3e-048
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3 / -3
Query: 877 QAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKK 776
QAP GRGS +FES+RA AAAG+ E +QI+K
Sbjct: 4394566 QAPHGRGS*IFESQRAAAAGAAAGKFVETYQIQK 4394465
Score = 46.9 bits (96), Expect(3) = 1e-029
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 881 HLCMVSILAFSFLYSWHQFPSLS 949
H C+VS LAFSFLYSWHQ P S
Sbjct: 4394658 HFCIVSTLAFSFLYSWHQLPYTS 4394726
Score = 44.1 bits (90), Expect(3) = 1e-029
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3 / +3
Query: 939 PHFQIQLK*EPFQHRNIAHNVLEFCP 1016
P QIQLK* PF HR+ AHNV FCP
Sbjct: 4396875 PECQIQLK*GPFLHRSSAHNVQGFCP 4396952
Score = 41.8 bits (85), Expect(3) = 2e-027
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1 / -1
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRK 775
+HLMGEDLESLN K LKHIRSRK
Sbjct: 4394565 RHLMGEDLESLNLKELQQLEQQLENSLKHIRSRK 4394464
Score = 40.9 bits (83), Expect(3) = 2e-027
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 1016 WTKF*NVMSDIPMLKRLLFQLNLKVR 939
WTK NVMS PM KR LFQLNL +R
Sbjct: 4396952 WTKSLNVMSATPMQKRSLFQLNLTLR 4396875
Score = 38.2 bits (77), Expect(5) = 3e-048
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -3
Query: 426 GLPPWMLSHLNA*GG 382
GLPPWMLSH+N *GG
Sbjct: 4393252 GLPPWMLSHING*GG 4393208
>gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS221
mRNA, complete cds
Length = 1070
Score = 195 bits (421), Expect = 7e-048
Identities = 84/174 (48%), Positives = 122/174 (70%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 140 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 319
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
++S S M K LERY+RY YA + + S+ N EY LKA +E +Q+ ++L+GED
Sbjct: 320 FSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGED 499
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQK 694
L L LK IRSRK+ ++ + + +L++KE+ LQ+ N+ L++
Sbjct: 500 LAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKR 661
>dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E14, full
insert sequence
Length = 1284
Score = 195 bits (420), Expect = 1e-047
Identities = 85/178 (47%), Positives = 124/178 (69%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ +MGRGKV L+RIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+++FS G+LY+
Sbjct: 273 REIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQ 452
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGED 856
++S S M K LERY+RY YA + + S+ N E LKA +E +Q+ ++L+GED
Sbjct: 453 FSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQE*VNLKAHVEILQQSQRNLLGED 632
Query: 855 LESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSE 682
L L LK IRSRK+ ++ + + +L++KE+ LQ+ N+ L+++L E
Sbjct: 633 LAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 806
>gb|C72923.1|C72923 C72923 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2475_1A, mRNA sequence
Length = 400
Score = 160 bits (343), Expect(2) = 1e-046
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = -1 / +3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 81 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 260
Query: 1041 YEYASDSRMDKIL 1003
YEYA DSRMDKIL
Sbjct: 261 YEYAXDSRMDKIL 299
Score = 130 bits (279), Expect(2) = 1e-035
Identities = 58/73 (79%), Positives = 61/73 (83%)
Frame = +2 / -1
Query: 1004 RILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFS 1183
RILS+ ES AYS*SLPLGEKT+ ATSASQRTEISCAFFS+PF LE VTC ILFSIRFS
Sbjct: 298 RILSILESXAYS*SLPLGEKTIAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFS 119
Query: 1184 CTLPRPIFACLRS 1222
CT PRPI A RS
Sbjct: 118 CTFPRPILAARRS 80
Score = 51.9 bits (107), Expect(2) = 1e-046
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -1 / +3
Query: 993 ERYSYAEKALISAESESEGNWCHEYRKLK 907
+R SYAEKALI AESE +G WCHE R+LK
Sbjct: 312 KRXSYAEKALI*AESEXKGIWCHEXRELK 398
Score = 44.6 bits (91), Expect(2) = 1e-035
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +3 / -2
Query: 906 PSVSCIRGTNFPHFQIQLK*EPFQHRNIA 992
P V I GT FP F+IQLK EPFQH N A
Sbjct: 399 P*VPXIHGTKFPXFRIQLKLEPFQHMNXA 313
>dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029M13, full
insert sequence
Length = 1152
Score = 139 bits (299), Expect(2) = 1e-045
Identities = 58/92 (63%), Positives = 77/92 (83%)
Frame = -1 / +3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR+ KMGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+I+FS +G+L
Sbjct: 75 ERRRKKMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRL 254
Query: 1041 YEYASDSRMDKILERYERYSYAEKALISAESE 946
+E++S S M K LERY +Y + + E+E
Sbjct: 255 FEFSSSSCMYKTLERYRSCNYNSQDAAAPENE 350
Score = 68.9 bits (144), Expect(2) = 1e-045
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = -1 / +3
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
EY KLK ++E +Q ++++GEDL L+ K LK IRSRK+ + + + +
Sbjct: 363 EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFD 542
Query: 744 LQKKERSLQEENKALQKELSE 682
L+ KE+ LQ+ NK L+K+L E
Sbjct: 543 LKSKEQQLQDLNKDLRKKLQE 605
>dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O08, full
insert sequence
Length = 1188
Score = 139 bits (299), Expect(2) = 2e-045
Identities = 58/92 (63%), Positives = 77/92 (83%)
Frame = -1 / +2
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR+ KMGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+I+FS +G+L
Sbjct: 71 ERRRKKMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRL 250
Query: 1041 YEYASDSRMDKILERYERYSYAEKALISAESE 946
+E++S S M K LERY +Y + + E+E
Sbjct: 251 FEFSSSSCMYKTLERYRSCNYNSQDAAAPENE 346
Score = 68.4 bits (143), Expect(2) = 2e-045
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = -1 / +2
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
EY KLK ++E +Q ++++GEDL L+ K LK +RSRK+ + + + +
Sbjct: 359 EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQVRSRKNQALLDQLFD 538
Query: 744 LQKKERSLQEENKALQKELSE 682
L+ KE+ LQ+ NK L+K+L E
Sbjct: 539 LKSKEQQLQDLNKDLRKKLQE 601
>gb|CF332154.1|CF332154 NACL--08-I21.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--08-I21, mRNA
sequence
Length = 619
Score = 138 bits (295), Expect(2) = 4e-045
Identities = 57/92 (61%), Positives = 77/92 (83%)
Frame = -1 / +3
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR+ KMGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+S+LCDAEVA+I+FS +G+L
Sbjct: 60 ERRRKKMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRL 239
Query: 1041 YEYASDSRMDKILERYERYSYAEKALISAESE 946
+E++S S M K L+RY +Y + + E+E
Sbjct: 240 FEFSSSSCMYKTLKRYRSCNYNSQDAAAPENE 335
Score = 68.9 bits (144), Expect(2) = 4e-045
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = -1 / +3
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
EY KLK ++E +Q ++++GEDL L+ K LK IRSRK+ + + + +
Sbjct: 348 EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFD 527
Query: 744 LQKKERSLQEENKALQKELSE 682
L+ KE+ LQ+ NK L+K+L E
Sbjct: 528 LKSKEQQLQDLNKDLRKKLQE 590
>dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C04, full
insert sequence
Length = 1784
Score = 185 bits (398), Expect = 1e-044
Identities = 79/95 (83%), Positives = 89/95 (93%)
Frame = -1 / +2
Query: 1224 RDRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGK 1045
R + + KMGRGKVQLKRIENKINRQVTFSKRR+GLLKKA+EISVLCDAEVA+I+FS KGK
Sbjct: 284 RRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 463
Query: 1044 LYEYASDSRMDKILERYERYSYAEKALISAESESE 940
LYEYA+DS MDKILERYERYSYAEK LISAES+++
Sbjct: 464 LYEYATDSCMDKILERYERYSYAEKVLISAESDTQ 568
Score = 153 bits (329), Expect = 4e-035
Identities = 76/98 (77%), Positives = 79/98 (80%)
Frame = +2 / -3
Query: 935 FPSLSDSAEIRAFSA*EYRS*RSRILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAF 1114
F +SDSAEIR FSA*E RS*RSRILS+ ES AYS*SLPL EK M+ATSASQ TEIS AF
Sbjct: 573 FT*VSDSAEIRTFSA*E*RS*RSRILSIHESVAYS*SLPLVEKMMSATSASQSTEISFAF 394
Query: 1115 FSSPFRRLEKVTCRFILFSIRFSCTLPRPIFACLRSLL 1228
SSP RLEKVTCR ILFSIRFSCTLPRPIF LL
Sbjct: 393 LSSPDLRLEKVTCRLILFSIRFSCTLPRPIFLLFFLLL 280
Score = 67.5 bits (141), Expect(2) = 8e-021
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 1234 ERKQRSEAGEDGARQGAAEADREQDKPAGDLLQAPERAAEEG 1109
E ++ E EDGA QGAAEADREQD+PAGDLLQA AA+EG
Sbjct: 274 EEEEEEEQEEDGAGQGAAEADREQDQPAGDLLQAQVGAAQEG 399
Score = 57.9 bits (120), Expect(2) = 8e-021
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -3 / +1
Query: 1054 QGQALRVRLRLPHGQNSRTL*AIFLC*KGSYFS*I*K*GK 935
QGQALRVR RL +GQN TL*A+ LC KG YFS*I* GK
Sbjct: 454 QGQALRVRHRLMYGQNP*TL*ALLLCRKGPYFS*I*HSGK 573
>dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006N09, full
insert sequence
Length = 1134
Score = 123 bits (264), Expect(2) = 5e-044
Identities = 50/63 (79%), Positives = 59/63 (93%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R +MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE
Sbjct: 122 RSGEMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYE 301
Query: 1035 YAS 1027
+ S
Sbjct: 302 FGS 310
Score = 79.4 bits (167), Expect(2) = 5e-044
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = -1 / +2
Query: 936 NWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAE 757
+W HE KLKAK E +QR +HL+GEDL L+ K L R RK+ LM E
Sbjct: 395 SWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMME 574
Query: 756 SISELQKKERSLQEENKALQKEL 688
+ EL++KER L E N+ L+ +L
Sbjct: 575 QVEELRRKERQLGEINRQLKHKL 643
>gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6) mRNA, complete cds
Length = 1043
Score = 123 bits (264), Expect(2) = 5e-044
Identities = 50/63 (79%), Positives = 59/63 (93%)
Frame = -1 / +1
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R +MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE
Sbjct: 22 RSGEMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYE 201
Query: 1035 YAS 1027
+ S
Sbjct: 202 FGS 210
Score = 79.4 bits (167), Expect(2) = 5e-044
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = -1 / +1
Query: 936 NWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAE 757
+W HE KLKAK E +QR +HL+GEDL L+ K L R RK+ LM E
Sbjct: 295 SWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMME 474
Query: 756 SISELQKKERSLQEENKALQKEL 688
+ EL++KER L E N+ L+ +L
Sbjct: 475 QVEELRRKERQLGEINRQLKHKL 543
>gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone pNS-YP13, mRNA
sequence
Length = 670
Score = 123 bits (264), Expect(2) = 5e-044
Identities = 50/63 (79%), Positives = 59/63 (93%)
Frame = -1 / +1
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R +MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE
Sbjct: 103 RSGEMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYE 282
Query: 1035 YAS 1027
+ S
Sbjct: 283 FGS 291
Score = 79.4 bits (167), Expect(2) = 5e-044
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = -1 / +1
Query: 936 NWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAE 757
+W HE KLKAK E +QR +HL+GEDL L+ K L R RK+ LM E
Sbjct: 376 SWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMME 555
Query: 756 SISELQKKERSLQEENKALQKEL 688
+ EL++KER L E N+ L+ +L
Sbjct: 556 QVEELRRKERQLGEINRQLKHKL 624
>gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5) mRNA, complete cds
Length = 1027
Score = 132 bits (283), Expect(2) = 2e-043
Identities = 54/79 (68%), Positives = 69/79 (87%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ MGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +G+L+E
Sbjct: 113 RERSMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFE 292
Query: 1035 YASDSRMDKILERYERYSY 979
+++ S M K LERY +Y
Sbjct: 293 FSTSSCMYKTLERYRSCNY 349
Score = 68.4 bits (143), Expect(2) = 2e-043
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = -1 / +2
Query: 960 SAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRS 781
SA E+E + EY KLK ++E +Q ++L+GEDL L+ K L +IRS
Sbjct: 371 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRS 550
Query: 780 RKSHLMAESISELQKKERSLQEENKALQKELSE 682
K+ + + + EL++KE+ LQ+ NK L++++ E
Sbjct: 551 SKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 649
>dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-B10, full
insert sequence
Length = 1022
Score = 132 bits (283), Expect(2) = 2e-043
Identities = 54/79 (68%), Positives = 69/79 (87%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ MGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +G+L+E
Sbjct: 126 RERSMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFE 305
Query: 1035 YASDSRMDKILERYERYSY 979
+++ S M K LERY +Y
Sbjct: 306 FSTSSCMYKTLERYRSCNY 362
Score = 68.4 bits (143), Expect(2) = 2e-043
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = -1 / +3
Query: 960 SAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRS 781
SA E+E + EY KLK ++E +Q ++L+GEDL L+ K L +IRS
Sbjct: 384 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRS 563
Query: 780 RKSHLMAESISELQKKERSLQEENKALQKELSE 682
K+ + + + EL++KE+ LQ+ NK L++++ E
Sbjct: 564 SKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 662
>ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1022
Score = 132 bits (283), Expect(2) = 2e-043
Identities = 54/79 (68%), Positives = 69/79 (87%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ MGRGKV+LKRIENKI+RQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +G+L+E
Sbjct: 126 RERSMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFE 305
Query: 1035 YASDSRMDKILERYERYSY 979
+++ S M K LERY +Y
Sbjct: 306 FSTSSCMYKTLERYRSCNY 362
Score = 68.4 bits (143), Expect(2) = 2e-043
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = -1 / +3
Query: 960 SAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRS 781
SA E+E + EY KLK ++E +Q ++L+GEDL L+ K L +IRS
Sbjct: 384 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRS 563
Query: 780 RKSHLMAESISELQKKERSLQEENKALQKELSE 682
K+ + + + EL++KE+ LQ+ NK L++++ E
Sbjct: 564 SKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 662
>gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS216
mRNA, complete cds
Length = 1265
Score = 140 bits (301), Expect(2) = 8e-041
Identities = 60/92 (65%), Positives = 72/92 (78%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE
Sbjct: 222 RSIGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYE 401
Query: 1035 YASDSRMDKILERYERYSYAEKALISAESESE 940
+ S M K LE+Y++ SYA ESE
Sbjct: 402 FCSTQSMTKTLEKYQKCSYAGPETAVQNRESE 497
Score = 55.6 bits (115), Expect(2) = 8e-041
Identities = 22/65 (33%), Positives = 41/65 (63%)
Frame = -1 / +3
Query: 876 KHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQ 697
++L+GEDL+SL K LKH+R+ ++ + + ++ELQ+KE+ + E N+ L+
Sbjct: 672 RNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 851
Query: 696 KELSE 682
++L E
Sbjct: 852 RKLEE 866
>gb|C74564.1|C74564 C74564 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31864_1A, mRNA sequence
Length = 438
Score = 160 bits (344), Expect(2) = 3e-039
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = -1 / +2
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 107 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 286
Query: 1041 YEYASDSRMDKIL 1003
YEYA+DSRMDKIL
Sbjct: 287 YEYATDSRMDKIL 325
Score = 132 bits (282), Expect(2) = 8e-030
Identities = 59/73 (80%), Positives = 61/73 (83%)
Frame = +2 / -1
Query: 1004 RILSMRESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFS 1183
RILS+ ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFS
Sbjct: 324 RILSILESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFS 145
Query: 1184 CTLPRPIFACLRS 1222
CT PRPI A RS
Sbjct: 144 CTFPRPILAARRS 106
Score = 26.7 bits (52), Expect(2) = 3e-039
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -3 / +3
Query: 991 AIFLC*KGSYF 959
A+F+C*KGSYF
Sbjct: 339 ALFIC*KGSYF 371
Score = 23.5 bits (45), Expect(2) = 8e-030
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / -3
Query: 945 FQIQLK*EPFQHRNIA 992
F K*EPFQH N A
Sbjct: 385 FXFS*K*EPFQHMNSA 338
>dbj|AK070958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065L09, full
insert sequence
Length = 1407
Score = 118 bits (253), Expect(2) = 3e-037
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R MGRGK+++KRIENK +RQVTF KRRNGLLKKA+E+++LCDAE+A+IVFS +G+LYE
Sbjct: 185 RLINMGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYE 364
Query: 1035 YASDSRMDKILERYERYS 982
+++ + +ERY++ S
Sbjct: 365 FSNVNSTRSTIERYKKAS 418
Score = 62.0 bits (129), Expect(2) = 3e-037
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = -1 / +2
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
E K++ +I+T+Q ++HL+GE + ++ K + IRS+K L+ I
Sbjct: 479 EAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEY 658
Query: 744 LQKKERSLQEENKALQKELSERQKA 670
+QK+E LQ EN L+ +++E ++A
Sbjct: 659 MQKREADLQNENMFLRAKVAEAERA 733
>gb|AY551913.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS207
mRNA, complete cds
Length = 1049
Score = 118 bits (253), Expect(2) = 3e-037
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -1 / +3
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R MGRGK+++KRIENK +RQVTF KRRNGLLKKA+E+++LCDAE+A+IVFS +G+LYE
Sbjct: 75 RLINMGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYE 254
Query: 1035 YASDSRMDKILERYERYS 982
+++ + +ERY++ S
Sbjct: 255 FSNVNSTRSTIERYKKAS 308
Score = 62.0 bits (129), Expect(2) = 3e-037
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = -1 / +3
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
E K++ +I+T+Q ++HL+GE + ++ K + IRS+K L+ I
Sbjct: 369 EAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEY 548
Query: 744 LQKKERSLQEENKALQKELSERQKA 670
+QK+E LQ EN L+ +++E ++A
Sbjct: 549 MQKREADLQNENMFLRAKVAEAERA 623
>ref|XM_463559.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 798
Score = 117 bits (251), Expect(2) = 5e-037
Identities = 45/74 (60%), Positives = 64/74 (86%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRGK+++KRIENK +RQVTF KRRNGLLKKA+E+++LCDAE+A+IVFS +G+LYE+++
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 180
Query: 1023 SRMDKILERYERYS 982
+ +ERY++ S
Sbjct: 181 NSTRSTIERYKKAS 222
Score = 62.0 bits (129), Expect(2) = 5e-037
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = -1 / +1
Query: 924 EYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAESISE 745
E K++ +I+T+Q ++HL+GE + ++ K + IRS+K L+ I
Sbjct: 283 EAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEY 462
Query: 744 LQKKERSLQEENKALQKELSERQKA 670
+QK+E LQ EN L+ +++E ++A
Sbjct: 463 MQKREADLQNENMFLRAKVAEAERA 537
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 149 bits (320), Expect = 6e-034
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -1 / -2
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 463063 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 462884
Query: 1041 YEYASDSR 1018
YEYA+DSR
Sbjct: 462883 YEYATDSR 462860
Score = 127 bits (273), Expect = 2e-027
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDA+VA+IVFS KGKLYE++S
Sbjct: 23626728 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 23626907
Query: 1023 SR 1018
SR
Sbjct: 23626908 SR 23626913
Score = 124 bits (266), Expect = 2e-026
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +3
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 462864 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 463043
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 463044 ILAARRS 463064
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
complete sequence
Length = 29644043
Score = 149 bits (320), Expect = 6e-034
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -1 / -1
Query: 1221 DRRQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKL 1042
+RR A+MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVA IVFSPKGKL
Sbjct: 476492 ERRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKL 476313
Query: 1041 YEYASDSR 1018
YEYA+DSR
Sbjct: 476312 YEYATDSR 476289
Score = 127 bits (273), Expect = 2e-027
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRG VQL+RIENKINRQVTFSKRRNGLLKKAHEISVLCDA+VA+IVFS KGKLYE++S
Sbjct: 24734985 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 24735164
Query: 1023 SR 1018
SR
Sbjct: 24735165 SR 24735170
Score = 124 bits (266), Expect = 2e-026
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 1022 ESEAYS*SLPLGEKTMTATSASQRTEISCAFFSSPFRRLEKVTCRFILFSIRFSCTLPRP 1201
ES AYS*SLPLGEKTM ATSASQRTEISCAFFS+PF LE VTC ILFSIRFSCT PRP
Sbjct: 476293 ESVAYS*SLPLGEKTMAATSASQRTEISCAFFSNPFLLLENVTCLLILFSIRFSCTFPRP 476472
Query: 1202 IFACLRS 1222
I A RS
Sbjct: 476473 ILAARRS 476493
>gb|CF315263.1|CF315263 HD--04-B23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-B23, mRNA sequence
Length = 626
Score = 129 bits (276), Expect(2) = 3e-033
Identities = 53/79 (67%), Positives = 68/79 (86%)
Frame = -1 / +2
Query: 1215 RQAKMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYE 1036
R+ MGRGKV LKRIENKI+RQVTF+KRRNGLLKKA+E+SVLCDAEVA+++FS +G+L+E
Sbjct: 197 RERSMGRGKV*LKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLFE 376
Query: 1035 YASDSRMDKILERYERYSY 979
+++ S M K LERY +Y
Sbjct: 377 FSTSSCMYKTLERYRSCNY 433
Score = 37.7 bits (76), Expect(2) = 3e-033
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -1 / +2
Query: 960 SAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLN 841
SA E+E + EY KLK ++E +Q ++L+GEDL L+
Sbjct: 455 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLS 574
>emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein
Length = 1003
Score = 141 bits (302), Expect(2) = 4e-033
Identities = 60/88 (68%), Positives = 71/88 (80%)
Frame = -1 / +3
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRGKV+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+ S
Sbjct: 3 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 182
Query: 1023 SRMDKILERYERYSYAEKALISAESESE 940
M K LE+Y++ SYA ESE
Sbjct: 183 QSMTKTLEKYQKCSYAGPETAVQNRESE 266
Score = 83.1 bits (175), Expect(2) = 2e-021
Identities = 37/102 (36%), Positives = 63/102 (61%)
Frame = -1 / +3
Query: 987 YSYAEKALISAESESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXX 808
Y+ E A+ + ESE +EY KLKA++E +QR ++L+GEDL+SL K
Sbjct: 225 YAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQL 404
Query: 807 XXXLKHIRSRKSHLMAESISELQKKERSLQEENKALQKELSE 682
LKH+R+ ++ + + ++ELQ+KE+ + E N+ L+++L E
Sbjct: 405 DSYLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEE 530
Score = 47.8 bits (98), Expect(2) = 2e-021
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3 / +2
Query: 1201 GARQGAAEADREQDKPAGDLLQAPERAAEEG 1109
G QG AE DREQD+PAGD+ QA E A+EG
Sbjct: 5 GEGQGGAEEDREQDQPAGDVRQAQEWPAQEG 97
Score = 25.4 bits (49), Expect(2) = 4e-033
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3 / +2
Query: 922 IQETEGQN*DHTKMPQAPDGRGSRVFESKRAPTTRAAAGELTEAHQIKKEPPYG 761
I +TEG+ * T + G S KRA R AA ++EA Q K+ G
Sbjct: 290 IPQTEGKG*KFTADSKKFAG*RS*FIRHKRAREPREAA*FISEARQNYKDKTSG 451
>gb|AY250075.1| Oryza sativa (japonica cultivar-group) MADS20 (MADS20) mRNA, complete
cds
Length = 998
Score = 110 bits (235), Expect(2) = 8e-033
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAS 1027
MGRGKVQ++RIEN+++RQVTFSKRR GLLKKAHEI+VLCD +VA IVFS KG L+ YAS
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYAS 177
Score = 55.1 bits (114), Expect(2) = 8e-033
Identities = 27/89 (30%), Positives = 51/89 (57%)
Frame = -1 / +1
Query: 948 ESEGNWCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSH 769
E EG+ +++ KL+ KIE +++ ++LMG++L+SL + L +IRSRK
Sbjct: 265 ELEGSMRYDHIKLRGKIEALKKSQRNLMGQELDSLTLQDIQQLEDQIDTSLNNIRSRKEK 444
Query: 768 LMAESISELQKKERSLQEENKALQKELSE 682
L+ E + L+KK L+ + +++ +E
Sbjct: 445 LLMEKNTILEKKITELETLHTSIRASPTE 531
>gb|AY177696.1| Oryza sativa (japonica cultivar-group) transcription factor MADS27
mRNA, complete cds
Length = 803
Score = 101 bits (215), Expect(2) = 8e-033
Identities = 38/61 (62%), Positives = 52/61 (85%)
Frame = -1 / +1
Query: 1203 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYASD 1024
MGRGK+ ++RI+N +RQVTFSKRRNG+ KKA E+++LCDAEV +++FS G+LYEY+S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 180
Query: 1023 S 1021
S
Sbjct: 181 S 183
Score = 64.3 bits (134), Expect(2) = 8e-033
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = -1 / +1
Query: 933 WCHEYRKLKAKIETIQRCHKHLMGEDLESLNPKXXXXXXXXXXXXLKHIRSRKSHLMAES 754
W E L+ ++ +Q H+ LMGEDL LN K L+ +R++K H++ +
Sbjct: 265 WQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDE 444
Query: 753 ISELQKKERSLQEENKALQKELS 685
I EL +K + +EN L K++S
Sbjct: 445 IHELNRKGSLVHQENMELYKKIS 513
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 6,515,827,778
Number of Sequences: 438736
Number of extensions: 85748369
Number of successful extensions: 390786
Number of sequences better than 1.0e-020: 279
length of database: 933,473,305
effective HSP length: 61
effective length of database: 906,710,409
effective search space used: 328229168058
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)