TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115208.2.3
(672 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_475449.1| Oryza sativa (japonica cultivar-group), p... 338 4e-091
dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA... 311 4e-083
ref|NM_191079.1| Oryza sativa (japonica cultivar-group), p... 311 4e-083
gb|AC093952.2| Oryza sativa (japonica cultivar-group) chrom... 227 8e-083
gb|AC118289.2| Oryza sativa (japonica cultivar-group) chrom... 227 9e-083
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 227 7e-082
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 227 2e-080
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 224 1e-077
dbj|AP003255.3| Oryza sativa (japonica cultivar-group) geno... 224 1e-077
dbj|AP003411.4| Oryza sativa (japonica cultivar-group) geno... 224 1e-077
gb|AACV01002567.1| Oryza sativa (japonica cultivar-group) c... 224 1e-077
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 224 1e-056
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 224 1e-056
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 224 1e-056
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 224 1e-056
gb|C73196.1|C73196 C73196 Rice panicle at flowering stage O... 205 4e-051
gb|AU101215.1|AU101215 AU101215 Rice panicle at flowering s... 187 1e-046
ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA 184 1e-044
dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA... 181 6e-044
dbj|AK070790.1| Oryza sativa (japonica cultivar-group) cDNA... 179 3e-043
dbj|AK071517.1| Oryza sativa (japonica cultivar-group) cDNA... 179 3e-043
ref|XM_473496.1| Oryza sativa (japonica cultivar-group), p... 179 3e-043
ref|XM_476421.1| Oryza sativa (japonica cultivar-group), mRNA 167 1e-039
dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA... 165 4e-039
gb|AACV01016348.1| Oryza sativa (japonica cultivar-group) c... 99 4e-034
ref|XM_480151.1| Oryza sativa (japonica cultivar-group), mRNA 147 1e-033
gb|AACV01014794.1| Oryza sativa (japonica cultivar-group) c... 101 2e-033
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 101 4e-032
dbj|AP003728.3| Oryza sativa (japonica cultivar-group) geno... 101 7e-032
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 99 4e-031
gb|AQ160819.1|AQ160819 nbxb0006E03r CUGI Rice BAC Library O... 101 8e-030
ref|NM_197271.1| Oryza sativa (japonica cultivar-group) put... 130 1e-029
gb|C71978.1|C71978 C71978 Rice panicle at flowering stage O... 133 1e-029
dbj|AK101455.1| Oryza sativa (japonica cultivar-group) cDNA... 130 2e-029
ref|XM_549803.1| Oryza sativa (japonica cultivar-group), mRNA 130 2e-029
gb|AACV01010279.1| Oryza sativa (japonica cultivar-group) c... 100 2e-029
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 101 7e-029
gb|AU101619.1|AU101619 AU101619 Rice root Oryza sativa (jap... 131 7e-029
dbj|AK102494.1| Oryza sativa (japonica cultivar-group) cDNA... 131 7e-029
ref|NM_185313.2| Oryza sativa (japonica cultivar-group), mRNA 131 7e-029
emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromoso... 100 2e-028
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 101 2e-028
gb|AQ273678.1|AQ273678 nbxb0030P13f CUGI Rice BAC Library O... 101 2e-027
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 100 5e-027
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 100 2e-026
dbj|AP004262.2| Oryza sativa (japonica cultivar-group) geno... 94 2e-026
gb|AACV01015064.1| Oryza sativa (japonica cultivar-group) c... 94 3e-026
ref|NM_183431.1| Oryza sativa (japonica cultivar-group), p... 77 4e-025
gb|C73552.1|C73552 C73552 Rice panicle at ripening stage Or... 117 1e-024
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-024
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 113 8e-024
gb|AACV01012443.1| Oryza sativa (japonica cultivar-group) c... 113 2e-023
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 113 2e-023
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 94 9e-023
gb|AQ843693.1|AQ843693 nbxb0024N22r CUGI Rice BAC Library O... 72 2e-021
>ref|XM_475449.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1671
Score = 338 bits (732), Expect = 4e-091
Identities = 132/149 (88%), Positives = 142/149 (95%)
Frame = +2 / +1
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVR 181
VPPAVNGPLHV+PNVITAEFRTFIEI+FENPEKS+DS+H+DGYAFF VGMGPGKWS E R
Sbjct: 1222 VPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDSVHLDGYAFFAVGMGPGKWSAEER 1401
Query: 182 KTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARS 361
KTYNLLD VSRH++QVYPRSWTAIMLTFDNAGMW+V SNIWER+YLGEQ YISVVSPARS
Sbjct: 1402 KTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARS 1581
Query: 362 LRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
LRDEYNMP+NALRCGKVVGLPLPPSY PA
Sbjct: 1582 LRDEYNMPENALRCGKVVGLPLPPSYLPA 1668
Score = 274 bits (592), Expect = 9e-072
Identities = 117/138 (84%), Positives = 121/138 (87%)
Frame = -1 / -2
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA SGMLYSSRSD AGETTLM*+CSPR* SQML+ T H+PALSNVSMIAVHD
Sbjct: 1634 TTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTFHIPALSNVSMIAVHDL 1455
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNS 55
GYTW CRLT SSRLYVFL+S DHFPGPIPT KKA*PS W ESMLFSGFSK ISMKVRNS
Sbjct: 1454 GYTWTECRLTPSSRLYVFLSSADHFPGPIPTAKKA*PSRWTESMLFSGFSKMISMKVRNS 1275
Query: 54 AVMTLGMTWRGPFTAGGT 1
AVMTLG TWRGP TAGGT
Sbjct: 1274 AVMTLGTTWRGPLTAGGT 1221
Score = 206 bits (445), Expect = 2e-051
Identities = 89/113 (78%), Positives = 95/113 (84%)
Frame = -3 / -1
Query: 439 VGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVVER 260
VGRRQRQ DLAAAEGV+ HVVLV + RRRDDADVELL EVVPLPDVG H PH VVER
Sbjct: 1659 VGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLPDVGPHVPHPGVVER 1480
Query: 259 QHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHPDAEEGVAIDVEGVYA 101
QHD RP PRVHLDRVPAH VQQVVRLP LRRPLP HPD EEGVA++V+GV+A
Sbjct: 1479 QHDRRPRPRVHLDRVPAHPVQQVVRLPLLRRPLPRPHPDGEEGVAVEVDGVHA 1321
Score = 127 bits (273), Expect(2) = 9e-032
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +1 / +3
Query: 163 VVAGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQR 342
VV GGEEDVQPAG GEPA PGVP V+DG+HADVRQR VER QHLG LPR A LHQR
Sbjct: 1383 VVGGGEEDVQPAGRGEPALGPGVPEVVDGDHADVRQRRDVEREVQHLGEALPRRAALHQR 1562
Query: 343 RLAGAITARRVQHA 384
RLAG + RVQHA
Sbjct: 1563 RLAGEVAPGRVQHA 1604
Score = 33.1 bits (66), Expect(2) = 9e-032
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 1 RAPRRERSPPCHPQCHHRRV 60
RA RR+ PP PQ HHRRV
Sbjct: 1221 RAARRQWPPPRRPQRHHRRV 1280
>dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111E13, full
insert sequence
Length = 2451
Score = 311 bits (674), Expect = 4e-083
Identities = 120/149 (80%), Positives = 133/149 (89%)
Frame = +2 / +2
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVR 181
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF GMGPG W+PE R
Sbjct: 1397 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAGMGPGIWTPECR 1576
Query: 182 KTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARS 361
KTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q Y+SVVSPARS
Sbjct: 1577 KTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARS 1756
Query: 362 LRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
LRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 1757 LRDEYNMPEIALRCGKVVGLPMPPSYLPA 1843
Score = 243 bits (524), Expect = 2e-062
Identities = 104/138 (75%), Positives = 114/138 (82%)
Frame = -1 / -1
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 1809 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 1630
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNS 55
GYTWIVCRLTVSSRLYVFL SG H PGP+P KKA*P W+ESMLFSGFSKT SMKVRNS
Sbjct: 1629 GYTWIVCRLTVSSRLYVFLHSGVHIPGPMPAAKKA*PLMWKESMLFSGFSKTTSMKVRNS 1450
Query: 54 AVMTLGMTWRGPFTAGGT 1
A MTLG ++ G AGGT
Sbjct: 1449 AEMTLGASFCGTVVAGGT 1396
Score = 184 bits (396), Expect = 1e-044
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -3 / -3
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 1840 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 1661
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHPDAEEGVAIDVEGVYA 101
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H EEGVA+DVEGV A
Sbjct: 1660 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPHAGGEEGVAVDVEGVDA 1496
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +1
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 1564 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 1743
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 1744 AGEVAPGRVQHA 1779
>ref|NM_191079.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1662
Score = 311 bits (674), Expect = 4e-083
Identities = 120/149 (80%), Positives = 133/149 (89%)
Frame = +2 / +1
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVR 181
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF GMGPG W+PE R
Sbjct: 1213 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAGMGPGIWTPECR 1392
Query: 182 KTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARS 361
KTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q Y+SVVSPARS
Sbjct: 1393 KTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARS 1572
Query: 362 LRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
LRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 1573 LRDEYNMPEIALRCGKVVGLPMPPSYLPA 1659
Score = 243 bits (524), Expect = 2e-062
Identities = 104/138 (75%), Positives = 114/138 (82%)
Frame = -1 / -2
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 1625 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 1446
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNS 55
GYTWIVCRLTVSSRLYVFL SG H PGP+P KKA*P W+ESMLFSGFSKT SMKVRNS
Sbjct: 1445 GYTWIVCRLTVSSRLYVFLHSGVHIPGPMPAAKKA*PLMWKESMLFSGFSKTTSMKVRNS 1266
Query: 54 AVMTLGMTWRGPFTAGGT 1
A MTLG ++ G AGGT
Sbjct: 1265 AEMTLGASFCGTVVAGGT 1212
Score = 184 bits (396), Expect = 1e-044
Identities = 83/115 (72%), Positives = 87/115 (75%)
Frame = -3 / -1
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 1656 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 1477
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHPDAEEGVAIDVEGVYA 101
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H EEGVA+DVEGV A
Sbjct: 1476 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPHAGGEEGVAVDVEGVDA 1312
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +3
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 1380 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 1559
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 1560 AGEVAPGRVQHA 1595
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
complete sequence
Length = 127642
Score = 227 bits (491), Expect(2) = 8e-083
Identities = 89/100 (89%), Positives = 94/100 (94%)
Frame = +2 / -3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPGKWS E RKTYNLLD VSRH++QVYPRSWTAIMLTFDNAGMW+V SNIWER+YLGEQ
Sbjct: 19637 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 19458
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
YISVVSPARSLRDEYNMP+NALRCGKVVGLPLPPSY PA
Sbjct: 19457 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA 19338
Score = 180 bits (388), Expect(2) = 2e-065
Identities = 79/98 (80%), Positives = 81/98 (82%)
Frame = -3 / +3
Query: 439 VGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVVER 260
VGRRQRQ DLAAAEGV+ HVVLV + RRRDDADVELL EVVPLPDVG H PH VVER
Sbjct: 19347 VGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLPDVGPHVPHPGVVER 19526
Query: 259 QHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHP 146
QHD RP PRVHLDRVPAH VQQVVRLP LRRPLP HP
Sbjct: 19527 QHDRRPRPRVHLDRVPAHPVQQVVRLPLLRRPLPRPHP 19640
Score = 174 bits (374), Expect(2) = 2e-042
Identities = 74/89 (83%), Positives = 78/89 (87%)
Frame = -1 / +1
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA SGMLYSSRSD AGETTLM*+CSPR* SQML+ T H+PALSNVSMIAVHD
Sbjct: 19372 TTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTFHIPALSNVSMIAVHDL 19551
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTW CRLT SSRLYVFL+S DHFPGPI
Sbjct: 19552 GYTWTECRLTPSSRLYVFLSSADHFPGPI 19638
Score = 127 bits (273), Expect(2) = 5e-029
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +1 / -2
Query: 163 VVAGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQR 342
VV GGEEDVQPAG GEPA PGVP V+DG+HADVRQR VER QHLG LPR A LHQR
Sbjct: 19623 VVGGGEEDVQPAGRGEPALGPGVPEVVDGDHADVRQRRDVEREVQHLGEALPRRAALHQR 19444
Query: 343 RLAGAITARRVQHA 384
RLAG + RVQHA
Sbjct: 19443 RLAGEVAPGRVQHA 19402
Score = 113 bits (241), Expect(2) = 8e-083
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +2 / -3
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPAVNGPLHV+PNVITAEFRTFIEI+FENPEKS+DS+H+DGYAFF VG
Sbjct: 20348 VPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDSVHLDGYAFFAVG 20202
Score = 102 bits (218), Expect(2) = 2e-065
Identities = 43/49 (87%), Positives = 43/49 (87%)
Frame = -1 / +1
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
PT KKA*PS W ESMLFSGFSK ISMKVRNSAVMTLG TWRGP TAGGT
Sbjct: 20203 PTAKKA*PSRWTESMLFSGFSKMISMKVRNSAVMTLGTTWRGPLTAGGT 20349
Score = 33.1 bits (66), Expect(2) = 5e-029
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -2
Query: 1 RAPRRERSPPCHPQCHHRRV 60
RA RR+ PP PQ HHRRV
Sbjct: 20349 RAARRQWPPPRRPQRHHRRV 20290
Score = 32.2 bits (64), Expect(2) = 2e-042
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 148 PDAEEGVAIDVEGVYA 101
PD EEGVA++V+GV+A
Sbjct: 20202 PDGEEGVAVEVDGVHA 20249
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15,
complete sequence
Length = 137357
Score = 227 bits (491), Expect(2) = 9e-083
Identities = 89/100 (89%), Positives = 94/100 (94%)
Frame = +2 / -3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPGKWS E RKTYNLLD VSRH++QVYPRSWTAIMLTFDNAGMW+V SNIWER+YLGEQ
Sbjct: 128769 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 128590
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
YISVVSPARSLRDEYNMP+NALRCGKVVGLPLPPSY PA
Sbjct: 128589 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA 128470
Score = 180 bits (388), Expect(2) = 2e-065
Identities = 79/98 (80%), Positives = 81/98 (82%)
Frame = -3 / +1
Query: 439 VGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVVER 260
VGRRQRQ DLAAAEGV+ HVVLV + RRRDDADVELL EVVPLPDVG H PH VVER
Sbjct: 128479 VGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLPDVGPHVPHPGVVER 128658
Query: 259 QHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHP 146
QHD RP PRVHLDRVPAH VQQVVRLP LRRPLP HP
Sbjct: 128659 QHDRRPRPRVHLDRVPAHPVQQVVRLPLLRRPLPRPHP 128772
Score = 174 bits (374), Expect(2) = 2e-042
Identities = 74/89 (83%), Positives = 78/89 (87%)
Frame = -1 / +2
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA SGMLYSSRSD AGETTLM*+CSPR* SQML+ T H+PALSNVSMIAVHD
Sbjct: 128504 TTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTFHIPALSNVSMIAVHDL 128683
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTW CRLT SSRLYVFL+S DHFPGPI
Sbjct: 128684 GYTWTECRLTPSSRLYVFLSSADHFPGPI 128770
Score = 127 bits (273), Expect(2) = 6e-029
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +1 / -2
Query: 163 VVAGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQR 342
VV GGEEDVQPAG GEPA PGVP V+DG+HADVRQR VER QHLG LPR A LHQR
Sbjct: 128755 VVGGGEEDVQPAGRGEPALGPGVPEVVDGDHADVRQRRDVEREVQHLGEALPRRAALHQR 128576
Query: 343 RLAGAITARRVQHA 384
RLAG + RVQHA
Sbjct: 128575 RLAGEVAPGRVQHA 128534
Score = 113 bits (241), Expect(2) = 9e-083
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +2 / -3
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPAVNGPLHV+PNVITAEFRTFIEI+FENPEKS+DS+H+DGYAFF VG
Sbjct: 129480 VPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDSVHLDGYAFFAVG 129334
Score = 102 bits (218), Expect(2) = 2e-065
Identities = 43/49 (87%), Positives = 43/49 (87%)
Frame = -1 / +2
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
PT KKA*PS W ESMLFSGFSK ISMKVRNSAVMTLG TWRGP TAGGT
Sbjct: 129335 PTAKKA*PSRWTESMLFSGFSKMISMKVRNSAVMTLGTTWRGPLTAGGT 129481
Score = 33.1 bits (66), Expect(2) = 6e-029
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -2
Query: 1 RAPRRERSPPCHPQCHHRRV 60
RA RR+ PP PQ HHRRV
Sbjct: 129481 RAARRQWPPPRRPQRHHRRV 129422
Score = 32.2 bits (64), Expect(2) = 2e-042
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3 / +1
Query: 148 PDAEEGVAIDVEGVYA 101
PD EEGVA++V+GV+A
Sbjct: 129334 PDGEEGVAVEVDGVHA 129381
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 227 bits (491), Expect(2) = 7e-082
Identities = 89/100 (89%), Positives = 94/100 (94%)
Frame = +2 / -1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPGKWS E RKTYNLLD VSRH++QVYPRSWTAIMLTFDNAGMW+V SNIWER+YLGEQ
Sbjct: 128769 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 128590
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
YISVVSPARSLRDEYNMP+NALRCGKVVGLPLPPSY PA
Sbjct: 128589 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA 128470
Score = 180 bits (388), Expect(2) = 1e-064
Identities = 79/98 (80%), Positives = 81/98 (82%)
Frame = -3 / +1
Query: 439 VGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVVER 260
VGRRQRQ DLAAAEGV+ HVVLV + RRRDDADVELL EVVPLPDVG H PH VVER
Sbjct: 128479 VGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLPDVGPHVPHPGVVER 128658
Query: 259 QHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHP 146
QHD RP PRVHLDRVPAH VQQVVRLP LRRPLP HP
Sbjct: 128659 QHDRRPRPRVHLDRVPAHPVQQVVRLPLLRRPLPRPHP 128772
Score = 174 bits (374), Expect = 1e-041
Identities = 74/89 (83%), Positives = 78/89 (87%)
Frame = -1 / +2
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA SGMLYSSRSD AGETTLM*+CSPR* SQML+ T H+PALSNVSMIAVHD
Sbjct: 128504 TTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTFHIPALSNVSMIAVHDL 128683
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTW CRLT SSRLYVFL+S DHFPGPI
Sbjct: 128684 GYTWTECRLTPSSRLYVFLSSADHFPGPI 128770
Score = 127 bits (273), Expect(2) = 4e-028
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +1 / -3
Query: 163 VVAGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQR 342
VV GGEEDVQPAG GEPA PGVP V+DG+HADVRQR VER QHLG LPR A LHQR
Sbjct: 128755 VVGGGEEDVQPAGRGEPALGPGVPEVVDGDHADVRQRRDVEREVQHLGEALPRRAALHQR 128576
Query: 343 RLAGAITARRVQHA 384
RLAG + RVQHA
Sbjct: 128575 RLAGEVAPGRVQHA 128534
Score = 113 bits (241), Expect(2) = 7e-082
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +2 / -1
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPAVNGPLHV+PNVITAEFRTFIEI+FENPEKS+DS+H+DGYAFF VG
Sbjct: 129480 VPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDSVHLDGYAFFAVG 129334
Score = 102 bits (218), Expect(2) = 1e-064
Identities = 43/49 (87%), Positives = 43/49 (87%)
Frame = -1 / +2
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
PT KKA*PS W ESMLFSGFSK ISMKVRNSAVMTLG TWRGP TAGGT
Sbjct: 129335 PTAKKA*PSRWTESMLFSGFSKMISMKVRNSAVMTLGTTWRGPLTAGGT 129481
Score = 33.1 bits (66), Expect(2) = 4e-028
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -3
Query: 1 RAPRRERSPPCHPQCHHRRV 60
RA RR+ PP PQ HHRRV
Sbjct: 129481 RAARRQWPPPRRPQRHHRRV 129422
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 227 bits (491), Expect(2) = 2e-080
Identities = 89/100 (89%), Positives = 94/100 (94%)
Frame = +2 / -1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPGKWS E RKTYNLLD VSRH++QVYPRSWTAIMLTFDNAGMW+V SNIWER+YLGEQ
Sbjct: 23738816 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 23738637
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
YISVVSPARSLRDEYNMP+NALRCGKVVGLPLPPSY PA
Sbjct: 23738636 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA 23738517
Score = 180 bits (388), Expect(2) = 3e-063
Identities = 79/98 (80%), Positives = 81/98 (82%)
Frame = -3 / +3
Query: 439 VGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVVER 260
VGRRQRQ DLAAAEGV+ HVVLV + RRRDDADVELL EVVPLPDVG H PH VVER
Sbjct: 23738526 VGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLPDVGPHVPHPGVVER 23738705
Query: 259 QHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHP 146
QHD RP PRVHLDRVPAH VQQVVRLP LRRPLP HP
Sbjct: 23738706 QHDRRPRPRVHLDRVPAHPVQQVVRLPLLRRPLPRPHP 23738819
Score = 174 bits (374), Expect = 1e-041
Identities = 74/89 (83%), Positives = 78/89 (87%)
Frame = -1 / +1
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA SGMLYSSRSD AGETTLM*+CSPR* SQML+ T H+PALSNVSMIAVHD
Sbjct: 23738551 TTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTFHIPALSNVSMIAVHDL 23738730
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTW CRLT SSRLYVFL+S DHFPGPI
Sbjct: 23738731 GYTWTECRLTPSSRLYVFLSSADHFPGPI 23738817
Score = 127 bits (273), Expect = 9e-028
Identities = 54/74 (72%), Positives = 57/74 (77%)
Frame = +1 / -3
Query: 163 VVAGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQR 342
VV GGEEDVQPAG GEPA PGVP V+DG+HADVRQR VER QHLG LPR A LHQR
Sbjct: 23738802 VVGGGEEDVQPAGRGEPALGPGVPEVVDGDHADVRQRRDVEREVQHLGEALPRRAALHQR 23738623
Query: 343 RLAGAITARRVQHA 384
RLAG + RVQHA
Sbjct: 23738622 RLAGEVAPGRVQHA 23738581
Score = 113 bits (241), Expect(2) = 2e-080
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +2 / -1
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPAVNGPLHV+PNVITAEFRTFIEI+FENPEKS+DS+H+DGYAFF VG
Sbjct: 23739527 VPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDSVHLDGYAFFAVG 23739381
Score = 102 bits (218), Expect(2) = 3e-063
Identities = 43/49 (87%), Positives = 43/49 (87%)
Frame = -1 / +1
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
PT KKA*PS W ESMLFSGFSK ISMKVRNSAVMTLG TWRGP TAGGT
Sbjct: 23739382 PTAKKA*PSRWTESMLFSGFSKMISMKVRNSAVMTLGTTWRGPLTAGGT 23739528
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 224 bits (483), Expect(2) = 1e-077
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / +3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 9269919 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 9270098
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 9270099 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 9270218
Score = 165 bits (355), Expect(2) = 4e-057
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / -3
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 9270184 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 9270005
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 9270004 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 9269918
Score = 160 bits (345), Expect(2) = 1e-040
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / -2
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 9270215 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 9270036
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 9270035 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 9269919
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +2
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 9269939 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 9270118
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 9270119 AGEVAPGRVQHA 9270154
Score = 90.4 bits (191), Expect(2) = 1e-077
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +2 / +1
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF G
Sbjct: 9269671 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAG 9269817
Score = 80.3 bits (169), Expect(2) = 4e-057
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = -1 / -2
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
P KKA*P W+ESMLFSGFSKT SMKVRNSA MTLG ++ G AGGT
Sbjct: 9269816 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGT 9269670
Score = 29.9 bits (59), Expect(2) = 1e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 148 PDAEEGVAIDVEGVYA 101
P EEGVA+DVEGV A
Sbjct: 9269817 PGGEEGVAVDVEGVDA 9269770
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0454H12
Length = 161004
Score = 224 bits (483), Expect(2) = 1e-077
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / +3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 1038 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 1217
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 1218 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 1337
Score = 165 bits (355), Expect(2) = 4e-057
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / -3
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 1303 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 1124
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 1123 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 1037
Score = 160 bits (345), Expect(2) = 1e-040
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / -2
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 1334 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 1155
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 1154 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 1038
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +2
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 1058 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 1237
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 1238 AGEVAPGRVQHA 1273
Score = 90.4 bits (191), Expect(2) = 1e-077
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +2 / +1
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF G
Sbjct: 790 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAG 936
Score = 80.3 bits (169), Expect(2) = 4e-057
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = -1 / -2
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
P KKA*P W+ESMLFSGFSKT SMKVRNSA MTLG ++ G AGGT
Sbjct: 935 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGT 789
Score = 29.9 bits (59), Expect(2) = 1e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 148 PDAEEGVAIDVEGVYA 101
P EEGVA+DVEGV A
Sbjct: 936 PGGEEGVAVDVEGVDA 889
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1148D12
Length = 132060
Score = 224 bits (483), Expect(2) = 1e-077
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / +1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 57106 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 57285
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 57286 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 57405
Score = 165 bits (355), Expect(2) = 4e-057
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / -2
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 57371 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 57192
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 57191 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 57105
Score = 160 bits (345), Expect(2) = 1e-040
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / -1
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 57402 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 57223
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 57222 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 57106
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +3
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 57126 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 57305
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 57306 AGEVAPGRVQHA 57341
Score = 90.4 bits (191), Expect(2) = 1e-077
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +2 / +2
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF G
Sbjct: 56858 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAG 57004
Score = 80.3 bits (169), Expect(2) = 4e-057
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = -1 / -1
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
P KKA*P W+ESMLFSGFSKT SMKVRNSA MTLG ++ G AGGT
Sbjct: 57003 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGT 56857
Score = 29.9 bits (59), Expect(2) = 1e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 148 PDAEEGVAIDVEGVYA 101
P EEGVA+DVEGV A
Sbjct: 57004 PGGEEGVAVDVEGVDA 56957
>gb|AACV01002567.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002567, whole
genome shotgun sequence
Length = 43694
Score = 224 bits (483), Expect(2) = 1e-077
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / -1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 2747 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 2568
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 2567 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 2448
Score = 165 bits (355), Expect(2) = 4e-057
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / +1
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 2482 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 2661
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 2662 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 2748
Score = 160 bits (345), Expect(2) = 1e-040
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / +3
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 2451 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 2630
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 2631 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 2747
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / -3
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 2727 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 2548
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 2547 AGEVAPGRVQHA 2512
Score = 90.4 bits (191), Expect(2) = 1e-077
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +2 / -2
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF G
Sbjct: 2995 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAG 2849
Score = 80.3 bits (169), Expect(2) = 4e-057
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = -1 / +3
Query: 147 PTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
P KKA*P W+ESMLFSGFSKT SMKVRNSA MTLG ++ G AGGT
Sbjct: 2850 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGT 2996
Score = 29.9 bits (59), Expect(2) = 1e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 148 PDAEEGVAIDVEGVYA 101
P EEGVA+DVEGV A
Sbjct: 2849 PGGEEGVAVDVEGVDA 2896
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 224 bits (483), Expect = 1e-056
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / +3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 34822536 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 34822715
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 34822716 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 34822835
Score = 165 bits (355), Expect = 4e-039
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / -3
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 34822801 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 34822622
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 34822621 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 34822535
Score = 160 bits (345), Expect = 1e-037
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / -2
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 34822832 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 34822653
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 34822652 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 34822536
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +2
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 34822556 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 34822735
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 34822736 AGEVAPGRVQHA 34822771
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 224 bits (483), Expect = 1e-056
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / +2
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 9090668 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 9090847
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 9090848 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 9090967
Score = 165 bits (355), Expect = 4e-039
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / -2
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 9090933 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 9090754
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 9090753 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 9090667
Score = 160 bits (345), Expect = 1e-037
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / -1
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 9090964 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 9090785
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 9090784 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 9090668
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +1
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 9090688 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 9090867
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 9090868 AGEVAPGRVQHA 9090903
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 224 bits (483), Expect = 1e-056
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / +1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 34292389 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 34292568
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 34292569 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 34292688
Score = 165 bits (355), Expect = 4e-039
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / -2
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 34292654 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 34292475
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 34292474 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 34292388
Score = 160 bits (345), Expect = 1e-037
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / -1
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 34292685 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 34292506
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 34292505 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 34292389
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +3
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 34292409 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 34292588
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 34292589 AGEVAPGRVQHA 34292624
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 224 bits (483), Expect = 1e-056
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +2 / +3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQ 328
MGPG W+PE RKTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAGMW++ SN+WERYYLG Q
Sbjct: 34741866 MGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQ 34742045
Query: 329 FYISVVSPARSLRDEYNMPDNALRCGKVVGLPLPPSYAPA 448
Y+SVVSPARSLRDEYNMP+ ALRCGKVVGLP+PPSY PA
Sbjct: 34742046 LYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSYLPA 34742165
Score = 165 bits (355), Expect = 4e-039
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / -3
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA+SGMLYSSRSD AG+TTL NC+PR*Y S ML+ H+PALSNVS+ AVHD
Sbjct: 34742131 TTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSNVSITAVHDL 34741952
Query: 234 GYTWIVCRLTVSSRLYVFLTSGDHFPGPI 148
GYTWIVCRLTVSSRLYVFL SG H PGP+
Sbjct: 34741951 GYTWIVCRLTVSSRLYVFLHSGVHIPGPM 34741865
Score = 160 bits (345), Expect = 1e-037
Identities = 72/99 (72%), Positives = 75/99 (75%)
Frame = -3 / -2
Query: 445 GGVGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVV 266
G VGRR RQ DLAAAEG + HVVLV + RRR ADV+L PEVVPLP VG PH RVV
Sbjct: 34742162 GEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPDVPHPRVV 34741983
Query: 265 ERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAH 149
ERQH RP PRVHLDRVPAHRVQQVVRLP LRRP P H
Sbjct: 34741982 ERQHHRRPRPRVHLDRVPAHRVQQVVRLPALRRPYPRPH 34741866
Score = 126 bits (269), Expect = 3e-027
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1 / +2
Query: 169 AGGEEDVQPAGHGEPAHDPGVPAVMDGNHADVRQRGHVERAFQHLGAVLPRGAVLHQRRL 348
AG +EDVQPAGHGEPAHDPGVP V+DG ADVRQRG VE QH+G VLPRGAV+ QR +
Sbjct: 34741886 AGVQEDVQPAGHGEPAHDPGVPEVVDGGDADVRQRGDVEHQVQHVGEVLPRGAVVRQRGI 34742065
Query: 349 AGAITARRVQHA 384
AG + RVQHA
Sbjct: 34742066 AGEVAPGRVQHA 34742101
>gb|C73196.1|C73196 C73196 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3359_1A, mRNA sequence
Length = 418
Score = 205 bits (442), Expect = 4e-051
Identities = 80/107 (74%), Positives = 89/107 (83%)
Frame = +2 / +2
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVR 181
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF GMGPG W+PE R
Sbjct: 89 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAGMGPGIWTPEFR 268
Query: 182 KTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLG 322
KTYNLLDTVSRHTIQVYPRSWTA+MLTFDNAG+ + WERY LG
Sbjct: 269 KTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGILDXRFHXWERYLLG 409
Score = 158 bits (340), Expect = 5e-037
Identities = 72/107 (67%), Positives = 77/107 (71%)
Frame = -1 / -2
Query: 321 PR*YRSQMLECTLHMPALSNVSMIAVHDRGYTWIVCRLTVSSRLYVFLTSGDHFPGPIPT 142
P Y S M +PALSNVS+ AVHD GYT IVCRLTVSSRLYVFL SG H PGP P
Sbjct: 408 PSKYLSXMWNLMSKIPALSNVSITAVHDLGYT*IVCRLTVSSRLYVFLNSGVHIPGPXPA 229
Query: 141 PKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMTWRGPFTAGGT 1
KKA*P W+ESMLFSGFS T SMKVRNSA TLG ++ G AGGT
Sbjct: 228 AKKA*PLMWKESMLFSGFSXTTSMKVRNSAEXTLGASFCGTVVAGGT 88
Score = 111 bits (237), Expect = 8e-023
Identities = 50/74 (67%), Positives = 53/74 (71%)
Frame = -3 / -1
Query: 322 PEVVPLPDVGMHAPHARVVERQHDCRP*PRVHLDRVPAHRVQQVVRLPHLRRPLPGAHPD 143
P VPLP V + RVVER H RP PRVHL+RVPAHRVQQVVRLP LRRP P H
Sbjct: 409 PX*VPLPXVEPXVQNPRVVERXHHRRPRPRVHLNRVPAHRVQQVVRLPELRRPYPRPHXG 230
Query: 142 AEEGVAIDVEGVYA 101
EEGVA+DVEGV A
Sbjct: 229 GEEGVAVDVEGVDA 188
>gb|AU101215.1|AU101215 AU101215 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2633, mRNA sequence
Length = 434
Score = 187 bits (403), Expect(2) = 1e-046
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = +2 / +2
Query: 200 DTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYN 379
D VSRH++QVYPRSWTAIMLTFDNAGMW+V SNIWER+YLGEQ YISVVSPARSLRDEYN
Sbjct: 2 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 181
Query: 380 MPDNALRCGKVVGLPLPPSYAPA 448
P+NALRCGKVVGLPLPPSY PA
Sbjct: 182 XPENALRCGKVVGLPLPPSYLPA 250
Score = 139 bits (298), Expect = 3e-031
Identities = 62/80 (77%), Positives = 64/80 (80%)
Frame = -3 / -2
Query: 439 VGRRQRQPHDLAAAEGVVGHVVLVAQ*SRRRDDADVELLPEVVPLPDVGMHAPHARVVER 260
VGRRQRQ DLAAAEGV+ VVLV + RRRDDADVELL VVPLPDVG H PH VVER
Sbjct: 241 VGRRQRQADDLAAAEGVLRXVVLVPERPRRRDDADVELLAXVVPLPDVGPHVPHPGVVER 62
Query: 259 QHDCRP*PRVHLDRVPAHRV 200
QHD RP PRVHLDRVPAH V
Sbjct: 61 QHDRRPRPRVHLDRVPAHPV 2
Score = 136 bits (291), Expect = 3e-030
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = -1 / -3
Query: 414 TTLPQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDR 235
TTLPQRRA SGMLYSSRSD AGETTLM*+CSPR* SQML+ T H+PALSNVSMIAVHD
Sbjct: 216 TTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTFHIPALSNVSMIAVHDL 37
Query: 234 GYTWIVCRLTVS 199
GYTW CRLT S
Sbjct: 36 GYTWTECRLTPS 1
Score = 24.4 bits (47), Expect(2) = 1e-046
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1 / +2
Query: 589 SKNHVMGVIYITLSHHLFQKKKK 657
SKNH G + + + H +KKKK
Sbjct: 365 SKNHCNGGVILYI*FHRSKKKKK 433
>ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1692
Score = 184 bits (396), Expect = 1e-044
Identities = 71/125 (56%), Positives = 89/125 (71%)
Frame = +2 / +1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V+ A +R ++EIVFENPE + S H+DGYAF+ VGM GKWS R+ YNL D VSR+T+
Sbjct: 1297 VMGASYRDYVEIVFENPENEVQSWHIDGYAFWVVGMDGGKWSSASRQGYNLRDAVSRYTV 1476
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP SWTAI + DN GMW+V S W R YLG+QFY+ V + + S RDEY +P NAL C
Sbjct: 1477 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 1656
Query: 404 GKVVG 418
G+ G
Sbjct: 1657 GRAAG 1671
Score = 110 bits (235), Expect = 2e-022
Identities = 59/111 (53%), Positives = 65/111 (58%)
Frame = -1 / -2
Query: 405 PQRRALSGMLYSSRSDRAGETTLM*NCSPR*YRSQMLECTLHMPALSNVSMIAVHDRGYT 226
PQRRA GM YSSR D T *NC PR +Q + T HMP LSN IAVH+ G T
Sbjct: 1658 PQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNGM*IAVHELG*T 1479
Query: 225 WIVCRLTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTIS 73
V R T S RL L + DHFP IPT +KA*PS + FSGFS TIS
Sbjct: 1478 *TVYRETASRRL*PCLLADDHFPPSIPTTQKA*PSMCHDCTSFSGFSNTIS 1326
>dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098E17, full
insert sequence
Length = 1954
Score = 181 bits (390), Expect = 6e-044
Identities = 67/125 (53%), Positives = 90/125 (72%)
Frame = +2 / +2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V+ A R ++E++FEN E + S H+DGYAF+ VGM G+W+P R++YNL D V+R+T+
Sbjct: 1265 VMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVGMDGGQWTPASRQSYNLRDAVARYTL 1444
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 1445 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 1624
Query: 404 GKVVG 418
G+ G
Sbjct: 1625 GRASG 1639
>dbj|AK070790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067H20, full
insert sequence
Length = 2016
Score = 179 bits (385), Expect = 3e-043
Identities = 66/122 (54%), Positives = 91/122 (74%)
Frame = +2 / +1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V+ +++R+F+EIVFEN E S+ H+DGY+ F VGM G WS + RK+YNL+D VSR T+
Sbjct: 1339 VMDSDYRSFLEIVFENSEDSVQIWHLDGYSLFVVGMDRGVWSEQSRKSYNLVDAVSRCTV 1518
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYPR+WTA+++ DN GMW++ S W R Y G+QFY+ V +P+ S RDE +P NALRC
Sbjct: 1519 QVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALRC 1698
Query: 404 GK 409
G+
Sbjct: 1699 GR 1704
>dbj|AK071517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100A14, full
insert sequence
Length = 1977
Score = 179 bits (385), Expect = 3e-043
Identities = 66/122 (54%), Positives = 91/122 (74%)
Frame = +2 / +2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V+ +++R+F+EIVFEN E S+ H+DGY+ F VGM G WS + RK+YNL+D VSR T+
Sbjct: 1346 VMDSDYRSFLEIVFENSEDSVQIWHLDGYSLFVVGMDRGVWSEQSRKSYNLVDAVSRCTV 1525
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYPR+WTA+++ DN GMW++ S W R Y G+QFY+ V +P+ S RDE +P NALRC
Sbjct: 1526 QVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALRC 1705
Query: 404 GK 409
G+
Sbjct: 1706 GR 1711
>ref|XM_473496.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1665
Score = 179 bits (385), Expect = 3e-043
Identities = 66/122 (54%), Positives = 91/122 (74%)
Frame = +2 / +1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V+ +++R+F+EIVFEN E S+ H+DGY+ F VGM G WS + RK+YNL+D VSR T+
Sbjct: 1255 VMDSDYRSFLEIVFENSEDSVQIWHLDGYSLFVVGMDRGVWSEQSRKSYNLVDAVSRCTV 1434
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYPR+WTA+++ DN GMW++ S W R Y G+QFY+ V +P+ S RDE +P NALRC
Sbjct: 1435 QVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALRC 1614
Query: 404 GK 409
G+
Sbjct: 1615 GR 1620
>ref|XM_476421.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1968
Score = 167 bits (359), Expect = 1e-039
Identities = 60/126 (47%), Positives = 87/126 (69%)
Frame = +2 / +2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTI 223
V+ FIE+VF+N E + S H+DGY F+ VG G G+W+ R TYNL+D +RHT+
Sbjct: 1277 VVRLNLHEFIEVVFQNTENELQSWHLDGYDFWVVGYGNGQWTENQRTTYNLVDAQARHTV 1456
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP W+AI+++ DN GMW++ S W+R YLG+Q Y+ V +P +S +EY++P NA+ C
Sbjct: 1457 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 1636
Query: 404 GKVVGL 421
G+ GL
Sbjct: 1637 GRAAGL 1654
>dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114C13, full
insert sequence
Length = 1967
Score = 165 bits (355), Expect = 4e-039
Identities = 59/118 (50%), Positives = 85/118 (72%)
Frame = +2 / +1
Query: 68 FIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
FIE+VF+N E + S H+DGY F+ VG G G+W+ R TYNL+D +RHT+QVYP W+
Sbjct: 1300 FIEVVFQNTENELQSWHLDGYDFWVVGYGNGQWTENQRTTYNLVDAQARHTVQVYPNGWS 1479
Query: 248 AIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRCGKVVGL 421
AI+++ DN GMW++ S W+R YLG+Q Y+ V +P +S +EY++P NA+ CG+ GL
Sbjct: 1480 AILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILCGRAAGL 1653
>gb|AACV01016348.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016348,
whole genome shotgun sequence
Length = 5078
Score = 98.7 bits (209), Expect(3) = 4e-034
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = +2 / -1
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP SWTAI + DN GMW+V S W R YLG+QFY+ V + + S RDEY +P NAL C
Sbjct: 452 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 273
Query: 404 GKVVG 418
G+ G
Sbjct: 272 GRAAG 258
Score = 55.6 bits (115), Expect(3) = 4e-034
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +2 / -2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ A +R ++EIVFENPE + S H+DGYAF+ VG
Sbjct: 1597 VMGASYRDYVEIVFENPENEVQSWHIDGYAFWVVG 1493
Score = 40.9 bits (83), Expect(3) = 4e-034
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVY 232
M GKWS R+ YNL D VSR+T+QV+
Sbjct: 1394 MDGGKWSSASRQGYNLRDAVSRYTVQVW 1311
>ref|XM_480151.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1803
Score = 147 bits (315), Expect = 1e-033
Identities = 55/138 (39%), Positives = 84/138 (60%)
Frame = +2 / +1
Query: 17 NGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNL 196
N P + + + A ++ F+EIVF+N + + + H+DGY+FF VGM G W+P+ R YN
Sbjct: 1282 NAPPKMASSTLNASYKGFLEIVFQNNDTGVQTYHLDGYSFFVVGMDNGDWTPDCRSRYNK 1461
Query: 197 LDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEY 376
D +SR T QV+P WTA++++ DN G+W++ S + +Y G++ Y+ V P E
Sbjct: 1462 WDAISRSTTQVFPGGWTAVLVSLDNVGIWNLRSEKLDNWYNGQEVYVKVADPLGYNITEM 1641
Query: 377 NMPDNALRCGKVVGLPLP 430
MPDNAL CG + L P
Sbjct: 1642 IMPDNALYCGLLKDLQKP 1695
>gb|AACV01014794.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014794, whole
genome shotgun sequence
Length = 29916
Score = 101 bits (216), Expect(3) = 2e-033
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2 / +2
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 3419 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 3598
Query: 404 GKVVG 418
G+ G
Sbjct: 3599 GRASG 3613
Score = 49.6 bits (102), Expect(3) = 2e-033
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2 / +3
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ A R ++E++FEN E + S H+DGYAF+ VG
Sbjct: 2976 VMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVG 3080
Score = 46.4 bits (95), Expect(3) = 2e-033
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2 / +2
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
M G+W+P R++YNL D V+R+T+QVY W+
Sbjct: 3167 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 3265
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0003H08
Length = 142068
Score = 101 bits (216), Expect(3) = 4e-032
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 5239 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 5060
Query: 404 GKVVG 418
G+ G
Sbjct: 5059 GRASG 5045
Score = 49.6 bits (102), Expect(3) = 4e-032
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2 / -1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ A R ++E++FEN E + S H+DGYAF+ VG
Sbjct: 5682 VMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVG 5578
Score = 46.4 bits (95), Expect(3) = 4e-032
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2 / -3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
M G+W+P R++YNL D V+R+T+QVY W+
Sbjct: 5491 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 5393
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0710B08
Length = 186991
Score = 101 bits (216), Expect(3) = 7e-032
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2 / -2
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 153825 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 153646
Query: 404 GKVVG 418
G+ G
Sbjct: 153645 GRASG 153631
Score = 49.6 bits (102), Expect(3) = 7e-032
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2 / -3
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ A R ++E++FEN E + S H+DGYAF+ VG
Sbjct: 154268 VMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVG 154164
Score = 46.4 bits (95), Expect(3) = 7e-032
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2 / -2
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
M G+W+P R++YNL D V+R+T+QVY W+
Sbjct: 154077 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 153979
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0409B11
Length = 168354
Score = 98.7 bits (209), Expect(3) = 4e-031
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = +2 / +3
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP SWTAI + DN GMW+V S W R YLG+QFY+ V + + S RDEY +P NAL C
Sbjct: 134280 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 134459
Query: 404 GKVVG 418
G+ G
Sbjct: 134460 GRAAG 134474
Score = 55.6 bits (115), Expect(3) = 4e-031
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +2 / +1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ A +R ++EIVFENPE + S H+DGYAF+ VG
Sbjct: 133135 VMGASYRDYVEIVFENPENEVQSWHIDGYAFWVVG 133239
Score = 40.9 bits (83), Expect(3) = 4e-031
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2 / +3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVY 232
M GKWS R+ YNL D VSR+T+QV+
Sbjct: 133338 MDGGKWSSASRQGYNLRDAVSRYTVQVW 133421
>gb|AQ160819.1|AQ160819 nbxb0006E03r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0006E03r, DNA sequence
Length = 753
Score = 101 bits (216), Expect(3) = 8e-030
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 334 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 155
Query: 404 GKVVG 418
G+ G
Sbjct: 154 GRASG 140
Score = 39.1 bits (79), Expect(3) = 8e-030
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2 / -3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
M G+ +P R++YNL D V+R+T+QVY W+
Sbjct: 586 MDGGQ*TPANRQSYNLRDAVARYTLQVYQCRWS 488
Score = 34.1 bits (68), Expect(3) = 8e-030
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2 / -3
Query: 71 IEIVFENPEKSIDSLHVDGYAFF 139
+E++FEN E + S H+DG AF+
Sbjct: 751 VEVIFENSENFVQSWHIDG*AFW 683
>ref|NM_197271.1| Oryza sativa (japonica cultivar-group) putative ascorbate oxidase
(OSJNBb0015K05.9), mRNA
Length = 1722
Score = 130 bits (278), Expect(2) = 1e-029
Identities = 46/104 (44%), Positives = 74/104 (71%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
++I +R F+E++F+N + + S H+DGYAFF VGM G+W+ + R TYN D V+R T
Sbjct: 1225 SIINGTYRGFMELIFQNNDTRMQSYHMDGYAFFVVGMDYGEWTEDSRGTYNKGDGVARST 1404
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSP 352
+QVYP +W A++++ DN G+W+V S + +YLG++ Y+ VV+P
Sbjct: 1405 VQVYPGAWAAVLVSLDNVGVWNVRSENLDSWYLGQEVYVRVVNP 1536
Score = 23.5 bits (45), Expect(2) = 1e-029
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 365 RDEYNMPDNALRCGKV 412
+ E +PDNAL CG++
Sbjct: 1552 KTEMAIPDNALFCGQL 1599
>gb|C71978.1|C71978 C71978 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0725_1A, mRNA sequence
Length = 356
Score = 133 bits (286), Expect = 1e-029
Identities = 52/69 (75%), Positives = 58/69 (84%)
Frame = +2 / +1
Query: 2 VPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVR 181
VPPA P + PNVI+AEFRTFIE+VFENPEKSIDS H++GYAFF GMGPG W+PE R
Sbjct: 148 VPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDSFHINGYAFFAAGMGPGIWTPEXR 327
Query: 182 KTYNLLDTV 208
KTYNLLDTV
Sbjct: 328 KTYNLLDTV 354
Score = 120 bits (256), Expect = 2e-025
Identities = 52/70 (74%), Positives = 56/70 (80%)
Frame = -1 / -1
Query: 210 LTVSSRLYVFLTSGDHFPGPIPTPKKA*PSTWRESMLFSGFSKTISMKVRNSAVMTLGMT 31
LTVSSRLYVFL SG H PGP+P KKA*P W+ESMLFSGFSKT SMKVRNSA MTLG +
Sbjct: 356 LTVSSRLYVFLXSGVHIPGPMPAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGAS 177
Query: 30 WRGPFTAGGT 1
+ G AGGT
Sbjct: 176 FCGTVVAGGT 147
>dbj|AK101455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040A20, full
insert sequence
Length = 2162
Score = 130 bits (279), Expect(2) = 2e-029
Identities = 50/107 (46%), Positives = 74/107 (69%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
++I ++ F+EI+F+N S+ S H+DGYAFF VGM G W+ R TYN D V+R T
Sbjct: 1354 SIINGTYKGFMEIIFQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARST 1533
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARS 361
IQV+P +WTA+++ DNAG+W++ + +YLG++ YISVV+P S
Sbjct: 1534 IQVFPGAWTAVLVFLDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 1674
Score = 22.1 bits (42), Expect(2) = 2e-029
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 380 MPDNALRCGKVVGLPLPPSY 439
+PDNA+ CG + L S+
Sbjct: 1696 LPDNAIFCGALSSLQKEQSH 1755
>ref|XM_549803.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2162
Score = 130 bits (279), Expect(2) = 2e-029
Identities = 50/107 (46%), Positives = 74/107 (69%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
++I ++ F+EI+F+N S+ S H+DGYAFF VGM G W+ R TYN D V+R T
Sbjct: 1354 SIINGTYKGFMEIIFQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARST 1533
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARS 361
IQV+P +WTA+++ DNAG+W++ + +YLG++ YISVV+P S
Sbjct: 1534 IQVFPGAWTAVLVFLDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 1674
Score = 22.1 bits (42), Expect(2) = 2e-029
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 380 MPDNALRCGKVVGLPLPPSY 439
+PDNA+ CG + L S+
Sbjct: 1696 LPDNAIFCGALSSLQKEQSH 1755
>gb|AACV01010279.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010279, whole
genome shotgun sequence
Length = 16074
Score = 100 bits (213), Expect(2) = 2e-029
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +2 / -3
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTA+++ DN GMW++ S W R Y G+QFY+ V +P+ S RDE +P NALR
Sbjct: 12076 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 11897
Query: 401 CGK 409
CG+
Sbjct: 11896 CGR 11888
Score = 58.8 bits (122), Expect(2) = 2e-029
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2 / -2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTV 208
V+ +++R+F+EIVFEN E S+ H+DGY+ F VG GP P+ ++L+ +V
Sbjct: 12446 VMDSDYRSFLEIVFENSEDSVQIWHLDGYSLFVVGYGPRYMPPD*CSPHHLVSSV 12282
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 101 bits (216), Expect(3) = 7e-029
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 5316801 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 5316622
Query: 404 GKVVG 418
G+ G
Sbjct: 5316621 GRASG 5316607
Score = 49.6 bits (102), Expect(3) = 7e-029
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2 / -1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ A R ++E++FEN E + S H+DGYAF+ VG
Sbjct: 5317244 VMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVG 5317140
Score = 46.4 bits (95), Expect(3) = 7e-029
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2 / -3
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
M G+W+P R++YNL D V+R+T+QVY W+
Sbjct: 5317053 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 5316955
>gb|AU101619.1|AU101619 AU101619 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0531, mRNA sequence
Length = 699
Score = 131 bits (281), Expect = 7e-029
Identities = 46/93 (49%), Positives = 67/93 (72%)
Frame = +2 / +1
Query: 143 VGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLG 322
VG G G+W+ R TYNL+D +RHT+QVYP W+AI+++ DN GMW++ S W+R YLG
Sbjct: 109 VGYGNGQWTENQRTTYNLVDAQARHTVQVYPNGWSAILVSLDNQGMWNLRSANWDRQYLG 288
Query: 323 EQFYISVVSPARSLRDEYNMPDNALRCGKVVGL 421
+Q Y+ V +P +S +EY++P NA+ CG+ GL
Sbjct: 289 QQLYMRVWTPQQSFSNEYSIPTNAILCGRAAGL 387
>dbj|AK102494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095A13, full
insert sequence
Length = 2224
Score = 131 bits (281), Expect = 7e-029
Identities = 50/113 (44%), Positives = 77/113 (68%)
Frame = +2 / +3
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
++GP + +VI + ++ F+EIVF+N + + + H+DGYAF+ VGM G+W+ R TYN
Sbjct: 1335 IDGPPVMKTSVINSTYKNFLEIVFQNNDTKVQTYHIDGYAFWVVGMDYGEWTENSRGTYN 1514
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSP 352
D VSR T QV+P +WTA+ML+ D+ G W+V + + +YLG++ YI VV P
Sbjct: 1515 KWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 1673
>ref|NM_185313.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 2223
Score = 131 bits (281), Expect = 7e-029
Identities = 50/113 (44%), Positives = 77/113 (68%)
Frame = +2 / +2
Query: 14 VNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYN 193
++GP + +VI + ++ F+EIVF+N + + + H+DGYAF+ VGM G+W+ R TYN
Sbjct: 1334 IDGPPVMKTSVINSTYKNFLEIVFQNNDTKVQTYHIDGYAFWVVGMDYGEWTENSRGTYN 1513
Query: 194 LLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSP 352
D VSR T QV+P +WTA+ML+ D+ G W+V + + +YLG++ YI VV P
Sbjct: 1514 KWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 1672
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
complete sequence
Length = 147806
Score = 100 bits (213), Expect(2) = 2e-028
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +2 / -1
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTA+++ DN GMW++ S W R Y G+QFY+ V +P+ S RDE +P NALR
Sbjct: 108020 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 107841
Query: 401 CGK 409
CG+
Sbjct: 107840 CGR 107832
Score = 58.8 bits (122), Expect(2) = 2e-028
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2 / -2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTV 208
V+ +++R+F+EIVFEN E S+ H+DGY+ F VG GP P+ ++L+ +V
Sbjct: 108388 VMDSDYRSFLEIVFENSEDSVQIWHLDGYSLFVVGYGPRYMPPD*CSPHHLVSSV 108224
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 101 bits (216), Expect(3) = 2e-028
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2 / -1
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 9258206 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 9258027
Query: 404 GKVVG 418
G+ G
Sbjct: 9258026 GRASG 9258012
Score = 49.6 bits (102), Expect(3) = 2e-028
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2 / -2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ A R ++E++FEN E + S H+DGYAF+ VG
Sbjct: 9258649 VMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVG 9258545
Score = 46.4 bits (95), Expect(3) = 2e-028
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2 / -1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
M G+W+P R++YNL D V+R+T+QVY W+
Sbjct: 9258458 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 9258360
>gb|AQ273678.1|AQ273678 nbxb0030P13f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0030P13f, DNA sequence
Length = 598
Score = 101 bits (216), Expect(2) = 2e-027
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2 / -1
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP+SWTAI + DN GMW++ S W R YLG+QFY+ V SPA S RDE +P NAL C
Sbjct: 334 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 155
Query: 404 GKVVG 418
G+ G
Sbjct: 154 GRASG 140
Score = 46.4 bits (95), Expect(2) = 2e-027
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2 / -1
Query: 149 MGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWT 247
M G+W+P R++YNL D V+R+T+QVY W+
Sbjct: 586 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 488
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 100 bits (213), Expect(2) = 5e-027
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +2 / -3
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTA+++ DN GMW++ S W R Y G+QFY+ V +P+ S RDE +P NALR
Sbjct: 1877446 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 1877267
Query: 401 CGK 409
CG+
Sbjct: 1877266 CGR 1877258
Score = 58.8 bits (122), Expect(2) = 5e-027
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2 / -1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTV 208
V+ +++R+F+EIVFEN E S+ H+DGY+ F VG GP P+ ++L+ +V
Sbjct: 1877814 VMDSDYRSFLEIVFENSEDSVQIWHLDGYSLFVVGYGPRYMPPD*CSPHHLVSSV 1877650
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 100 bits (213), Expect(2) = 2e-026
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +2 / -1
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALR 400
+QVYPR+WTA+++ DN GMW++ S W R Y G+QFY+ V +P+ S RDE +P NALR
Sbjct: 5904102 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 5903923
Query: 401 CGK 409
CG+
Sbjct: 5903922 CGR 5903914
Score = 58.8 bits (122), Expect(2) = 2e-026
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2 / -3
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTV 208
V+ +++R+F+EIVFEN E S+ H+DGY+ F VG GP P+ ++L+ +V
Sbjct: 5904472 VMDSDYRSFLEIVFENSEDSVQIWHLDGYSLFVVGYGPRYMPPD*CSPHHLVSSV 5904308
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0022B05
Length = 151317
Score = 94.1 bits (199), Expect(3) = 2e-026
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +2 / +3
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP W+AI+++ DN GMW++ S W+R YLG+Q Y+ V +P +S +EY++P NA+ C
Sbjct: 54204 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 54383
Query: 404 GKVVGL 421
G+ GL
Sbjct: 54384 GRAAGL 54401
Score = 43.2 bits (88), Expect(3) = 2e-026
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ FIE+VF+N E + S H+DGY F+ VG
Sbjct: 53456 VVRLNLHEFIEVVFQNTENELQSWHLDGYDFWVVG 53560
Score = 41.4 bits (84), Expect(3) = 2e-026
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 140 GVGMGPGKWSPEVRKTYNLLDTVSRHTIQV 229
G G G+W+ R TYNL+D +RHT+QV
Sbjct: 53682 GFRYGNGQWTENQRTTYNLVDAQARHTVQV 53771
>gb|AACV01015064.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015064, whole
genome shotgun sequence
Length = 187699
Score = 94.1 bits (199), Expect(3) = 3e-026
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +2 / +2
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP W+AI+++ DN GMW++ S W+R YLG+Q Y+ V +P +S +EY++P NA+ C
Sbjct: 123755 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 123934
Query: 404 GKVVGL 421
G+ GL
Sbjct: 123935 GRAAGL 123952
Score = 43.2 bits (88), Expect(3) = 3e-026
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2 / +1
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ FIE+VF+N E + S H+DGY F+ VG
Sbjct: 123007 VVRLNLHEFIEVVFQNTENELQSWHLDGYDFWVVG 123111
Score = 41.4 bits (84), Expect(3) = 3e-026
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 140 GVGMGPGKWSPEVRKTYNLLDTVSRHTIQV 229
G G G+W+ R TYNL+D +RHT+QV
Sbjct: 123233 GFRYGNGQWTENQRTTYNLVDAQARHTVQV 123322
>ref|NM_183431.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1791
Score = 77.1 bits (162), Expect(2) = 4e-025
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +2 / +1
Query: 41 NVITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHT 220
++I ++ F+EI+F+N S+ S H+DGYAFF VGM G W+ R TYN D V+R T
Sbjct: 1300 SIINGTYKGFMEIIFQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARST 1479
Query: 221 IQV 229
IQV
Sbjct: 1480 IQV 1488
Score = 61.6 bits (128), Expect(2) = 4e-025
Identities = 21/47 (44%), Positives = 35/47 (74%)
Frame = +2 / +1
Query: 221 IQVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARS 361
+QV+P +WTA+++ DNAG+W++ + +YLG++ YISVV+P S
Sbjct: 1579 LQVFPGAWTAVLVFLDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 1719
>gb|C73552.1|C73552 C73552 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11023_1A, mRNA sequence
Length = 447
Score = 117 bits (250), Expect = 1e-024
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +2 / +2
Query: 83 FENPEKSIDSLHVDGYAFFGVGMGPGKWSPEVRKTYNLLDTVSRHTIQVYPRSWTAIMLT 262
F+N S+ S H+DGYAFF VGM G W+ R TYN D V+R TIQV+P +WTA+++
Sbjct: 2 FQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAVLVF 181
Query: 263 FDNAGMWSVHSNIWERYYLGEQFYISVVSPARS 361
DNAG+W++ + +YLG++ YISVV+P S
Sbjct: 182 LDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 280
>gb|CH401218.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000055 genomic
scaffold, whole genome shotgun sequence
Length = 1431804
Score = 94.1 bits (199), Expect(3) = 2e-024
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +2 / +1
Query: 224 QVYPRSWTAIMLTFDNAGMWSVHSNIWERYYLGEQFYISVVSPARSLRDEYNMPDNALRC 403
QVYP W+AI+++ DN GMW++ S W+R YLG+Q Y+ V +P +S +EY++P NA+ C
Sbjct: 1099345 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 1099524
Query: 404 GKVVGL 421
G+ GL
Sbjct: 1099525 GRAAGL 1099542
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 44 VITAEFRTFIEIVFENPEKSIDSLHVDGYAFFGVG 148
V+ FIE+VF+N E + S H+DGY F+ VG
Sbjct: 1098597 VVRLNLHEFIEVVFQNTENELQSWHLDGYDFWVVG 1098701
Score = 41.4 bits (84), Expect(3) = 2e-024
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 140 GVGMGPGKWSPEVRKTYNLLDTVSRHTIQV 229
G G G+W+ R TYNL+D +RHT+QV
Sbjct: 1098823 GFRYGNGQWTENQRTTYNLVDAQARHTVQV 1098912
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,062,255,350
Number of Sequences: 438736
Number of extensions: 61054449
Number of successful extensions: 478008
Number of sequences better than 1.0e-020: 73
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 148844412484
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)