TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.1
(642 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_464471.1| Oryza sativa (japonica cultivar-group), mRNA 305 3e-081
gb|AACV01003552.1| Oryza sativa (japonica cultivar-group) c... 286 7e-077
dbj|AP004184.3| Oryza sativa (japonica cultivar-group) geno... 286 4e-076
dbj|AP004191.3| Oryza sativa (japonica cultivar-group) geno... 286 4e-076
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 286 2e-075
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 286 2e-075
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 286 2e-075
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 286 2e-075
dbj|AK072748.1| Oryza sativa (japonica cultivar-group) cDNA... 239 3e-061
ref|NT_107231.1| Oryza sativa (japonica cultivar-group) 239 3e-061
dbj|AP005466.2| Oryza sativa (japonica cultivar-group) geno... 239 3e-061
dbj|AP003608.3| Oryza sativa (japonica cultivar-group) geno... 239 3e-061
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 239 3e-061
dbj|AK072708.1| Oryza sativa (japonica cultivar-group) cDNA... 232 2e-059
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 232 2e-059
dbj|AP003626.3| Oryza sativa (japonica cultivar-group) geno... 232 2e-059
dbj|AP003616.4| Oryza sativa (japonica cultivar-group) geno... 232 2e-059
gb|AACV01014531.1| Oryza sativa (japonica cultivar-group) c... 232 2e-059
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 232 2e-059
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 232 2e-059
gb|AACV01014256.1| Oryza sativa (japonica cultivar-group) c... 232 4e-059
gb|AU082676.1|AU082676 AU082676 Rice panicle at flowering s... 183 2e-057
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 117 1e-050
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 117 1e-050
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 117 1e-050
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 117 1e-050
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 117 1e-050
dbj|AP003562.3| Oryza sativa (japonica cultivar-group) geno... 117 1e-050
gb|AACV01001330.1| Oryza sativa (japonica cultivar-group) c... 117 1e-050
ref|XM_463287.1| Oryza sativa (japonica cultivar-group), p... 117 2e-050
dbj|AK069989.1| Oryza sativa (japonica cultivar-group) cDNA... 116 3e-050
gb|AU094002.1|AU094002 AU094002 Rice panicle at flowering s... 106 1e-043
ref|XM_477090.1| Oryza sativa (japonica cultivar-group), mRNA 104 9e-033
dbj|AK119482.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-032
ref|XM_477087.1| Oryza sativa (japonica cultivar-group), mRNA 104 6e-032
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 73 3e-030
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 73 3e-030
gb|AU172897.1|AU172897 AU172897 Rice panicle (between 3cm t... 136 3e-030
dbj|AP003837.2| Oryza sativa (japonica cultivar-group) geno... 73 3e-030
gb|AACV01015402.1| Oryza sativa (japonica cultivar-group) c... 73 3e-030
ref|XM_477085.1| Oryza sativa (japonica cultivar-group), mRNA 101 9e-030
ref|XM_477091.1| Oryza sativa (japonica cultivar-group), mRNA 100 1e-029
dbj|AK069803.1| Oryza sativa (japonica cultivar-group) cDNA... 126 2e-029
ref|XM_481636.1| Oryza sativa (japonica cultivar-group), mRNA 126 2e-029
gb|AU172932.1|AU172932 AU172932 Rice panicle (between 3cm t... 131 9e-029
dbj|AK119501.1| Oryza sativa (japonica cultivar-group) cDNA... 66 5e-028
dbj|AP003943.3| Oryza sativa (japonica cultivar-group) geno... 73 1e-026
dbj|AP004759.3| Oryza sativa (japonica cultivar-group) geno... 97 6e-026
dbj|AP003884.2| Oryza sativa (japonica cultivar-group) geno... 97 6e-026
dbj|AP003867.1| Oryza sativa (japonica cultivar-group) chro... 97 6e-026
gb|AACV01018116.1| Oryza sativa (japonica cultivar-group) c... 97 6e-026
dbj|AK105520.1| Oryza sativa (japonica cultivar-group) cDNA... 79 2e-024
ref|XM_470039.1| Oryza sativa (japonica cultivar-group), mRNA 67 1e-023
dbj|AP003748.4| Oryza sativa (japonica cultivar-group) geno... 73 2e-023
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 83 5e-022
dbj|AP004886.3| Oryza sativa (japonica cultivar-group) geno... 83 5e-022
dbj|AP004150.2| Oryza sativa (japonica cultivar-group) geno... 83 5e-022
dbj|AK106802.1| Oryza sativa (japonica cultivar-group) cDNA... 83 5e-022
ref|XM_463996.1| Oryza sativa (japonica cultivar-group), mRNA 83 5e-022
dbj|AK105858.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-021
dbj|AK106049.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-021
dbj|AK071271.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-021
gb|CB643640.1|CB643640 OSJNEb04H02.r OSJNEb Oryza sativa (j... 68 1e-021
>ref|XM_464471.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1269
Score = 305 bits (660), Expect = 3e-081
Identities = 125/157 (79%), Positives = 135/157 (85%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMD
Sbjct: 799 GHGISVGSLGRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMD 978
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
NVSYPIIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+Q
Sbjct: 979 NVSYPIIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQ 1158
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
L NVD+KY N T+SVCKN GKS +AKELACV*
Sbjct: 1159 LHNVDLKYAGQGNTTLSVCKNVAGKSSNVAKELACV* 1269
Score = 184 bits (396), Expect(2) = 9e-049
Identities = 84/118 (71%), Positives = 89/118 (75%)
Frame = -3 / -2
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 1151 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 972
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
V YRNLVALS DLESSYDL+RRP VVP V V SLYRPRLPT MP P
Sbjct: 971 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYRPRLPTEMP*P 798
Score = 33.6 bits (67), Expect(2) = 9e-049
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 472 QTQASSFAMPMDLPMAFLQTD 410
QTQASS A +DLP FLQT+
Sbjct: 1268 QTQASSLATLLDLPATFLQTE 1206
>gb|AACV01003552.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003552, whole
genome shotgun sequence
Length = 23711
Score = 286 bits (619), Expect(2) = 7e-077
Identities = 119/156 (76%), Positives = 129/156 (82%)
Frame = +3 / +3
Query: 18 VGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
VG L RYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMDNVSYP
Sbjct: 936 VGHLCRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYP 1115
Query: 198 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVD 377
IIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD
Sbjct: 1116 IIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVD 1295
Query: 378 IKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 1296 LKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 1403
Score = 169 bits (363), Expect(2) = 3e-044
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = -3 / -2
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 1273 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 1094
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPT 17
V YRNLVALS DLESSYDL+RRP VVP V V SLY R PT
Sbjct: 1093 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYLQRWPT 935
Score = 33.6 bits (67), Expect(2) = 3e-044
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 472 QTQASSFAMPMDLPMAFLQTD 410
QTQASS A +DLP FLQT+
Sbjct: 1390 QTQASSLATLLDLPATFLQTE 1328
Score = 32.2 bits (64), Expect(2) = 7e-077
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRY 38
GHGISVGSLGRY
Sbjct: 422 GHGISVGSLGRY 457
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1225_F07
Length = 142772
Score = 286 bits (619), Expect(2) = 4e-076
Identities = 119/156 (76%), Positives = 129/156 (82%)
Frame = +3 / +3
Query: 18 VGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
VG L RYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMDNVSYP
Sbjct: 139569 VGHLCRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYP 139748
Query: 198 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVD 377
IIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD
Sbjct: 139749 IIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVD 139928
Query: 378 IKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 139929 LKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 140036
Score = 169 bits (363), Expect(2) = 3e-044
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = -3 / -2
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 139906 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 139727
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPT 17
V YRNLVALS DLESSYDL+RRP VVP V V SLY R PT
Sbjct: 139726 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYLQRWPT 139568
Score = 33.6 bits (67), Expect(2) = 3e-044
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 472 QTQASSFAMPMDLPMAFLQTD 410
QTQASS A +DLP FLQT+
Sbjct: 140023 QTQASSLATLLDLPATFLQTE 139961
Score = 32.2 bits (64), Expect(2) = 4e-076
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRY 38
GHGISVGSLGRY
Sbjct: 139055 GHGISVGSLGRY 139090
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1524_D08
Length = 143046
Score = 286 bits (619), Expect(2) = 4e-076
Identities = 119/156 (76%), Positives = 129/156 (82%)
Frame = +3 / +1
Query: 18 VGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
VG L RYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMDNVSYP
Sbjct: 66847 VGHLCRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYP 67026
Query: 198 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVD 377
IIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD
Sbjct: 67027 IIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVD 67206
Query: 378 IKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 67207 LKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 67314
Score = 169 bits (363), Expect(2) = 3e-044
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = -3 / -2
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 67184 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 67005
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPT 17
V YRNLVALS DLESSYDL+RRP VVP V V SLY R PT
Sbjct: 67004 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYLQRWPT 66846
Score = 33.6 bits (67), Expect(2) = 3e-044
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 472 QTQASSFAMPMDLPMAFLQTD 410
QTQASS A +DLP FLQT+
Sbjct: 67301 QTQASSLATLLDLPATFLQTE 67239
Score = 32.2 bits (64), Expect(2) = 4e-076
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRY 38
GHGISVGSLGRY
Sbjct: 66333 GHGISVGSLGRY 66368
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 286 bits (619), Expect = 2e-075
Identities = 119/156 (76%), Positives = 129/156 (82%)
Frame = +3 / +1
Query: 18 VGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
VG L RYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMDNVSYP
Sbjct: 785338 VGHLCRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYP 785517
Query: 198 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVD 377
IIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD
Sbjct: 785518 IIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVD 785697
Query: 378 IKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 785698 LKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 785805
Score = 169 bits (363), Expect(2) = 3e-044
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = -3 / -1
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 785675 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 785496
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPT 17
V YRNLVALS DLESSYDL+RRP VVP V V SLY R PT
Sbjct: 785495 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYLQRWPT 785337
Score = 33.6 bits (67), Expect(2) = 3e-044
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 472 QTQASSFAMPMDLPMAFLQTD 410
QTQASS A +DLP FLQT+
Sbjct: 785792 QTQASSLATLLDLPATFLQTE 785730
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 286 bits (619), Expect = 2e-075
Identities = 119/156 (76%), Positives = 129/156 (82%)
Frame = +3 / +2
Query: 18 VGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
VG L RYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMDNVSYP
Sbjct: 5516507 VGHLCRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYP 5516686
Query: 198 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVD 377
IIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD
Sbjct: 5516687 IIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVD 5516866
Query: 378 IKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 5516867 LKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 5516974
Score = 169 bits (363), Expect(2) = 3e-044
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = -3 / -2
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 5516844 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 5516665
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPT 17
V YRNLVALS DLESSYDL+RRP VVP V V SLY R PT
Sbjct: 5516664 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYLQRWPT 5516506
Score = 33.6 bits (67), Expect(2) = 3e-044
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 472 QTQASSFAMPMDLPMAFLQTD 410
QTQASS A +DLP FLQT+
Sbjct: 5516961 QTQASSLATLLDLPATFLQTE 5516899
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 286 bits (619), Expect = 2e-075
Identities = 119/156 (76%), Positives = 129/156 (82%)
Frame = +3 / +2
Query: 18 VGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
VG L RYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMDNVSYP
Sbjct: 5516507 VGHLCRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYP 5516686
Query: 198 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVD 377
IIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD
Sbjct: 5516687 IIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVD 5516866
Query: 378 IKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 5516867 LKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 5516974
Score = 169 bits (363), Expect = 3e-040
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = -3 / -1
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 5516844 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 5516665
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPT 17
V YRNLVALS DLESSYDL+RRP VVP V V SLY R PT
Sbjct: 5516664 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYLQRWPT 5516506
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 286 bits (619), Expect = 2e-075
Identities = 119/156 (76%), Positives = 129/156 (82%)
Frame = +3 / +3
Query: 18 VGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
VG L RYKDEKDVED+ VT CT+ GTTNGLRIKSYEDSKS L+ATKFLY +TMDNVSYP
Sbjct: 5413266 VGHLCRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYP 5413445
Query: 198 IIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVD 377
IIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD
Sbjct: 5413446 IIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVD 5413625
Query: 378 IKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 5413626 LKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 5413733
Score = 169 bits (363), Expect = 3e-040
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = -3 / -1
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLSM 176
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* TLSM
Sbjct: 5413603 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LTLSM 5413424
Query: 175 VTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPT 17
V YRNLVALS DLESSYDL+RRP VVP V V SLY R PT
Sbjct: 5413423 VMPSYRNLVALSCDLESSYDLIRRPFVVPFIVQLVTMMSSTSFSSLYLQRWPT 5413265
>dbj|AK072748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O11, full
insert sequence
Length = 1559
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 820 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 999
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 1000 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 1179
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 1180 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 1293
Score = 117 bits (250), Expect(2) = 4e-026
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / -1
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 1175 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 996
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 995 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 819
Score = 24.4 bits (47), Expect(2) = 4e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / -1
Query: 460 SSFAMPMDLPMAFLQT 413
SS P+ +P+AFLQT
Sbjct: 1277 SSLRQPVAVPLAFLQT 1230
>ref|NT_107231.1| Oryza sativa (japonica cultivar-group)
Length = 1372977
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 110749 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 110570
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 110569 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 110390
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 110389 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 110276
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 140107 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 139928
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 139927 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 139748
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 139747 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 139634
Score = 142 bits (304), Expect(2) = 1e-051
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G+GISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L +KF Y+++ M+
Sbjct: 100522 GYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTTSKFTYKNIKME 100343
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDV 275
+V+ PIIID KYCPN IC +G SKV + D+
Sbjct: 100342 DVANPIIIDMKYCPNKICTANGNSKVTIKDI 100250
Score = 117 bits (250), Expect(2) = 4e-026
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / +3
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 139752 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 139931
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 139932 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 140108
Score = 117 bits (250), Expect(2) = 4e-026
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / +3
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 110394 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 110573
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 110574 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 110750
Score = 85.4 bits (180), Expect(2) = 1e-051
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3 / -2
Query: 279 FKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKE 458
FKNI GTS+TPEA++L C++ LPC GV L +++++Y +NKTM+VCKNA G + G KE
Sbjct: 100247 FKNITGTSSTPEAVSLFCSDKLPCTGVTLNDINVEYAGKNNKTMAVCKNAKGTATGCLKE 100068
Score = 24.4 bits (47), Expect(2) = 4e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +3
Query: 460 SSFAMPMDLPMAFLQT 413
SS P+ +P+AFLQT
Sbjct: 139650 SSLRQPVAVPLAFLQT 139697
Score = 24.4 bits (47), Expect(2) = 4e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +3
Query: 460 SSFAMPMDLPMAFLQT 413
SS P+ +P+AFLQT
Sbjct: 110292 SSLRQPVAVPLAFLQT 110339
>dbj|AP005466.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OJ1212_H09
Length = 129040
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 58259 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 58080
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 58079 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 57900
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 57899 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 57786
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 87617 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 87438
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 87437 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 87258
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 87257 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 87144
Score = 142 bits (304), Expect(2) = 1e-051
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G+GISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L +KF Y+++ M+
Sbjct: 48032 GYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTTSKFTYKNIKME 47853
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDV 275
+V+ PIIID KYCPN IC +G SKV + D+
Sbjct: 47852 DVANPIIIDMKYCPNKICTANGNSKVTIKDI 47760
Score = 117 bits (250), Expect(2) = 4e-026
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / +1
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 87262 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 87441
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 87442 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 87618
Score = 117 bits (250), Expect(2) = 4e-026
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / +1
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 57904 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 58083
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 58084 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 58260
Score = 85.4 bits (180), Expect(2) = 1e-051
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3 / -2
Query: 279 FKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKE 458
FKNI GTS+TPEA++L C++ LPC GV L +++++Y +NKTM+VCKNA G + G KE
Sbjct: 47757 FKNITGTSSTPEAVSLFCSDKLPCTGVTLNDINVEYAGKNNKTMAVCKNAKGTATGCLKE 47578
Score = 24.4 bits (47), Expect(2) = 4e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 460 SSFAMPMDLPMAFLQT 413
SS P+ +P+AFLQT
Sbjct: 87160 SSLRQPVAVPLAFLQT 87207
Score = 24.4 bits (47), Expect(2) = 4e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 460 SSFAMPMDLPMAFLQT 413
SS P+ +P+AFLQT
Sbjct: 57802 SSLRQPVAVPLAFLQT 57849
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0007G12
Length = 111819
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 110749 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 110570
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 110569 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 110390
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 110389 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 110276
Score = 142 bits (304), Expect(2) = 1e-051
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G+GISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L +KF Y+++ M+
Sbjct: 100522 GYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTTSKFTYKNIKME 100343
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDV 275
+V+ PIIID KYCPN IC +G SKV + D+
Sbjct: 100342 DVANPIIIDMKYCPNKICTANGNSKVTIKDI 100250
Score = 117 bits (250), Expect(2) = 4e-026
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / +3
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 110394 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 110573
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 110574 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 110750
Score = 85.4 bits (180), Expect(2) = 1e-051
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3 / -2
Query: 279 FKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKE 458
FKNI GTS+TPEA++L C++ LPC GV L +++++Y +NKTM+VCKNA G + G KE
Sbjct: 100247 FKNITGTSSTPEAVSLFCSDKLPCTGVTLNDINVEYAGKNNKTMAVCKNAKGTATGCLKE 100068
Score = 24.4 bits (47), Expect(2) = 4e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +3
Query: 460 SSFAMPMDLPMAFLQT 413
SS P+ +P+AFLQT
Sbjct: 110292 SSLRQPVAVPLAFLQT 110339
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 20244749 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 20244570
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 20244569 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 20244390
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 20244389 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 20244276
Score = 239 bits (516), Expect = 3e-061
Identities = 95/158 (60%), Positives = 123/158 (77%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 20274107 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 20273928
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+TPEA++L C++ LPC GV
Sbjct: 20273927 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPEAVSLLCSDKLPCTGVT 20273748
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 20273747 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 20273634
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 24001767 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 24001946
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 24001947 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 24002126
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 24002127 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 24002237
Score = 144 bits (308), Expect = 1e-032
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -3
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 24002122 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 24001943
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 24001942 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 24001766
Score = 142 bits (304), Expect = 4e-032
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G+GISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L +KF Y+++ M+
Sbjct: 20234522 GYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTTSKFTYKNIKME 20234343
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDV 275
+V+ PIIID KYCPN IC +G SKV + D+
Sbjct: 20234342 DVANPIIIDMKYCPNKICTANGNSKVTIKDI 20234250
Score = 117 bits (250), Expect = 1e-024
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / +1
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 20273752 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 20273931
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 20273932 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 20274108
Score = 117 bits (250), Expect = 1e-024
Identities = 62/119 (52%), Positives = 70/119 (58%)
Frame = -3 / +1
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + ASGV EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 20244394 TPVHGSLSEQRRLTASGVEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 20244573
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 20244574 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 20244750
>dbj|AK072708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142F24, full
insert sequence
Length = 1503
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 858 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 1037
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 1038 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 1217
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 1218 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 1328
Score = 144 bits (308), Expect(2) = 5e-034
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -3
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 1213 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 1034
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 1033 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 857
Score = 24.4 bits (47), Expect(2) = 5e-034
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -3
Query: 466 QASSFAMPMDLPMAFLQT 413
QASS P+D P A+ QT
Sbjct: 1321 QASSLRHPVDFPSAWSQT 1268
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 1467252 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 1467431
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 1467432 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 1467611
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 1467612 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 1467722
Score = 144 bits (308), Expect(2) = 5e-034
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 1467607 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 1467428
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 1467427 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 1467251
Score = 24.4 bits (47), Expect(2) = 5e-034
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 466 QASSFAMPMDLPMAFLQT 413
QASS P+D P A+ QT
Sbjct: 1467715 QASSLRHPVDFPSAWSQT 1467662
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0429G06
Length = 158321
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 11460 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 11639
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 11640 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 11819
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 11820 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 11930
Score = 144 bits (308), Expect(2) = 5e-034
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 11815 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 11636
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 11635 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 11459
Score = 66.1 bits (138), Expect(3) = 3e-023
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKA 149
GHGISVGSLGR E DV ++V+ CT+AGT NG+RIK++ + S A
Sbjct: 7200 GHGISVGSLGRSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAA 7346
Score = 64.3 bits (134), Expect(3) = 3e-023
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3 / +2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V ++DV F+NI G S T A+ L+C+ PC+GV+L ++D++Y R T+S C N
Sbjct: 7820 SVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGVELRDIDLRYVRRGVATVSRCANVA 7999
Query: 432 GKSIG 446
G G
Sbjct: 8000 GGVAG 8014
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3 / +3
Query: 159 LYQDVTMDNVSYPIIIDQKYCPNNIC 236
+++D+ M V PIIIDQ+YCP C
Sbjct: 7377 VFEDIVMRRVRNPIIIDQEYCPYLSC 7454
Score = 24.4 bits (47), Expect(2) = 5e-034
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 466 QASSFAMPMDLPMAFLQT 413
QASS P+D P A+ QT
Sbjct: 11923 QASSLRHPVDFPSAWSQT 11870
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0490F09
Length = 149542
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 131378 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 131557
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 131558 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 131737
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 131738 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 131848
Score = 144 bits (308), Expect(2) = 5e-034
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 131733 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 131554
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 131553 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 131377
Score = 66.1 bits (138), Expect(3) = 3e-023
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKA 149
GHGISVGSLGR E DV ++V+ CT+AGT NG+RIK++ + S A
Sbjct: 127118 GHGISVGSLGRSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAA 127264
Score = 64.3 bits (134), Expect(3) = 3e-023
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3 / +1
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V ++DV F+NI G S T A+ L+C+ PC+GV+L ++D++Y R T+S C N
Sbjct: 127738 SVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGVELRDIDLRYVRRGVATVSRCANVA 127917
Query: 432 GKSIG 446
G G
Sbjct: 127918 GGVAG 127932
Score = 37.3 bits (75), Expect(3) = 3e-023
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3 / +2
Query: 159 LYQDVTMDNVSYPIIIDQKYCPNNIC 236
+++D+ M V PIIIDQ+YCP C
Sbjct: 127295 VFEDIVMRRVRNPIIIDQEYCPYLSC 127372
Score = 24.4 bits (47), Expect(2) = 5e-034
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 466 QASSFAMPMDLPMAFLQT 413
QASS P+D P A+ QT
Sbjct: 131841 QASSLRHPVDFPSAWSQT 131788
>gb|AACV01014531.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014531, whole
genome shotgun sequence
Length = 41492
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 32133 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 32312
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 32313 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 32492
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 32493 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 32603
Score = 144 bits (308), Expect(2) = 5e-034
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 32488 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 32309
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 32308 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 32132
Score = 65.7 bits (137), Expect(3) = 4e-024
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSS 140
GHGISVGSLGR E DV ++V+ CT+AGT NG+RIK++ + S
Sbjct: 27873 GHGISVGSLGRSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRS 28010
Score = 64.3 bits (134), Expect(3) = 4e-024
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3 / +2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V ++DV F+NI G S T A+ L+C+ PC+GV+L ++D++Y R T+S C N
Sbjct: 28493 SVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGVELRDIDLRYVRRGVATVSRCANVA 28672
Query: 432 GKSIG 446
G G
Sbjct: 28673 GGVAG 28687
Score = 37.3 bits (75), Expect(3) = 4e-024
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3 / +3
Query: 159 LYQDVTMDNVSYPIIIDQKYCPNNIC 236
+++D+ M V PIIIDQ+YCP C
Sbjct: 28050 VFEDIVMRRVRNPIIIDQEYCPYLSC 28127
Score = 24.4 bits (47), Expect(2) = 5e-034
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 466 QASSFAMPMDLPMAFLQT 413
QASS P+D P A+ QT
Sbjct: 32596 QASSLRHPVDFPSAWSQT 32543
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 5323065 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 5323244
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 5323245 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 5323424
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 5323425 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 5323535
Score = 232 bits (500), Expect = 4e-059
Identities = 92/158 (58%), Positives = 120/158 (75%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 1644165 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 1643986
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+ PE ++ C++ LPC GV
Sbjct: 1643985 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSKPEGVSPPCSDKLPCTGVT 1643806
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 1643805 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 1643692
Score = 144 bits (308), Expect = 1e-032
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 5323420 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 5323241
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 5323240 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 5323064
Score = 142 bits (304), Expect(2) = 1e-051
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G+GISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L +KF Y+++ M+
Sbjct: 1633928 GYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTTSKFTYKNIKME 1633749
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDV 275
+V+ PIIID KYCPN IC +G SKV + D+
Sbjct: 1633748 DVANPIIIDMKYCPNKICTANGNSKVTIKDI 1633656
Score = 113 bits (241), Expect = 2e-023
Identities = 60/119 (50%), Positives = 69/119 (57%)
Frame = -3 / +2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + SG+ EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 1643810 TPVHGSLSEQGGLTPSGLEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 1643989
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 1643990 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 1644166
Score = 85.4 bits (180), Expect(2) = 1e-051
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3 / -3
Query: 279 FKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKE 458
FKNI GTS+TPEA++L C++ LPC GV L +++++Y +NKTM+VCKNA G + G KE
Sbjct: 1633653 FKNITGTSSTPEAVSLFCSDKLPCTGVTLNDINVEYAGKNNKTMAVCKNAKGTATGCLKE 1633474
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 232 bits (502), Expect = 2e-059
Identities = 96/157 (61%), Positives = 114/157 (72%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGIS+GSLGRYKDE+DV DV VT C L TTNGLRIKSYEDS S + +K Y V MD
Sbjct: 23021802 GHGISIGSLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMD 23021981
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V PIIIDQKYCPN+IC G SKV+V DV F+NI G+SNTP + L C+ LPC GV
Sbjct: 23021982 HVDNPIIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVA 23022161
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV* 473
+ +V + Y SD KT +VC +A+GKS G KELAC+*
Sbjct: 23022162 MQDVRVLYGGSDKKTTAVCDHALGKSTGCLKELACL* 23022272
Score = 232 bits (500), Expect = 4e-059
Identities = 92/158 (58%), Positives = 120/158 (75%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 19342902 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 19342723
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+ PE ++ C++ LPC GV
Sbjct: 19342722 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSKPEGVSPPCSDKLPCTGVT 19342543
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 19342542 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 19342429
Score = 144 bits (308), Expect = 1e-032
Identities = 69/119 (57%), Positives = 75/119 (63%)
Frame = -3 / -1
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q S +GVL+ P MFLK TSLT TLE+P L QMLLGQYFWSMMMG T S
Sbjct: 23022157 TPLHGSLPEQSSWTTAGVLDDPVMFLKVTSLTDTLESPLLVQMLLGQYFWSMMMGLSTWS 23021978
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
M T L ++ D ESSYDL+RRPLVV V SLYRPRLP LMPWP
Sbjct: 23021977 MTTPS*DTLDTVTGDTESSYDLIRRPLVVLRRTQRVTETSRTSRSSLYRPRLPMLMPWP 23021801
Score = 142 bits (304), Expect = 4e-032
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G+GISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L +KF Y+++ M+
Sbjct: 19332665 GYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTTSKFTYKNIKME 19332486
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDV 275
+V+ PIIID KYCPN IC +G SKV + D+
Sbjct: 19332485 DVANPIIIDMKYCPNKICTANGNSKVTIKDI 19332393
Score = 113 bits (241), Expect = 2e-023
Identities = 60/119 (50%), Positives = 69/119 (57%)
Frame = -3 / +2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + SG+ EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 19342547 TPVHGSLSEQGGLTPSGLEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 19342726
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 19342727 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 19342903
>gb|AACV01014256.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014256, whole
genome shotgun sequence
Length = 44535
Score = 232 bits (500), Expect = 4e-059
Identities = 92/158 (58%), Positives = 120/158 (75%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHGISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L A+KF Y+++ M+
Sbjct: 25950 GHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKME 25771
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
+V+ PIIID KYCPN IC +G SKV + D+ FKNI GTS+ PE ++ C++ LPC GV
Sbjct: 25770 DVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSKPEGVSPPCSDKLPCTGVT 25591
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
L ++ ++Y+ ++NKTM+VCKNA G + G KEL+C *T
Sbjct: 25590 LNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF*T 25477
Score = 142 bits (304), Expect(2) = 1e-051
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G+GISVGSLGRYKDEKDV DV V C L +TNG+RIKSYED+ S L +KF Y+++ M+
Sbjct: 15713 GYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTTSKFTYKNIKME 15534
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDV 275
+V+ PIIID KYCPN IC +G SKV + D+
Sbjct: 15533 DVANPIIIDMKYCPNKICTANGNSKVTIKDI 15441
Score = 113 bits (241), Expect(2) = 7e-025
Identities = 60/119 (50%), Positives = 69/119 (57%)
Frame = -3 / +2
Query: 358 TPWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ETLS 179
TP G L Q + SG+ EVP MFLK SL TLE P Q+LLGQYF SMMMG T S
Sbjct: 25595 TPVHGSLSEQGGLTPSGLEEVPVMFLKVMSLMVTLELPLAVQILLGQYFMSMMMGLATSS 25774
Query: 178 MVTSWYRNLVALSDDLESSYDLMRRPLVVPASVHPVXXXXXXXXXSLYRPRLPTLMPWP 2
++ NL A+S + SS DL+R PLV S + SLY PRLPTLMPWP
Sbjct: 25775 ILMFS*VNLEAVSTEAASS*DLIRTPLVDFLSTQFLTVTSVTSFSSLYLPRLPTLMPWP 25951
Score = 85.4 bits (180), Expect(2) = 1e-051
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3 / -1
Query: 279 FKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKE 458
FKNI GTS+TPEA++L C++ LPC GV L +++++Y +NKTM+VCKNA G + G KE
Sbjct: 15438 FKNITGTSSTPEAVSLFCSDKLPCTGVTLNDINVEYAGKNNKTMAVCKNAKGTATGCLKE 15259
Score = 24.4 bits (47), Expect(2) = 7e-025
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +2
Query: 460 SSFAMPMDLPMAFLQT 413
SS P+ +P+AFLQT
Sbjct: 25493 SSLRQPVAVPLAFLQT 25540
>gb|AU082676.1|AU082676 AU082676 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3796, mRNA sequence
Length = 637
Score = 183 bits (395), Expect(3) = 2e-057
Identities = 76/101 (75%), Positives = 82/101 (81%)
Frame = +3 / +3
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQ 362
NVSYPIIIDQKYCPNNIC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+Q
Sbjct: 141 NVSYPIIIDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQ 320
Query: 363 LINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*TYLY 485
L NVD+KY N T+SVCKN GKS +AKELACV* Y
Sbjct: 321 LHNVDLKYAGQGNTTLSVCKNVAGKSSNVAKELACV*FSSY 443
Score = 104 bits (222), Expect(3) = 5e-034
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = -3 / -1
Query: 355 PWQGRLLAQLSVMASGVLEVPWMFLKTTSLTATLEAPDLTQMLLGQYFWSMMMG*ET 185
PW GRLLAQLSV ASGV +VP MFLKT S+TATL+ PD QMLLGQYFWSMM+G* T
Sbjct: 313 PWHGRLLAQLSVTASGVADVPTMFLKTMSVTATLDVPDAEQMLLGQYFWSMMIG*LT 143
Score = 54.7 bits (113), Expect(3) = 2e-057
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 102 GLRIKSYEDSKSSLKATKFLYQDVTMDNVSYP 197
G RIKSYEDSKS L+ATKFLY +TMD P
Sbjct: 59 GFRIKSYEDSKSQLRATKFLYDGITMDERELP 154
Score = 48.3 bits (99), Expect(3) = 5e-034
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -3 / -2
Query: 181 SMVTSWYRNLVALSDDLESSYDLMRRPL 98
SMV YRNLVALS DLESSYDL+R+P+
Sbjct: 138 SMVMPSYRNLVALSCDLESSYDLIRKPV 55
Score = 33.6 bits (67), Expect(3) = 5e-034
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 472 QTQASSFAMPMDLPMAFLQTD 410
QTQASS A +DLP FLQT+
Sbjct: 430 QTQASSLATLLDLPATFLQTE 368
Score = 26.7 bits (52), Expect(3) = 2e-057
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 48 KDVEDVKVTGCTLAG 92
KDVED+ VT CT G
Sbjct: 3 KDVEDIMVTXCTNKG 47
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 117 bits (251), Expect(2) = 1e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 18428321 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 18428142
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 18428141 GVANPVIVDQKYCPEKDCPEKKGSK 18428067
Score = 106 bits (226), Expect(2) = 1e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / -2
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 18428081 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 18427902
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 18427901 TNAKGISKGSLQALACL*S 18427845
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 117 bits (251), Expect(2) = 1e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 18349604 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 18349425
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 18349424 GVANPVIVDQKYCPEKDCPEKKGSK 18349350
Score = 106 bits (226), Expect(2) = 1e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / -2
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 18349364 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 18349185
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 18349184 TNAKGISKGSLQALACL*S 18349128
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 117 bits (251), Expect(2) = 1e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 18008664 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 18008485
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 18008484 GVANPVIVDQKYCPEKDCPEKKGSK 18008410
Score = 106 bits (226), Expect(2) = 1e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / -1
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 18008424 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 18008245
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 18008244 TNAKGISKGSLQALACL*S 18008188
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 117 bits (251), Expect(2) = 1e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 1383541 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 1383362
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 1383361 GVANPVIVDQKYCPEKDCPEKKGSK 1383287
Score = 106 bits (226), Expect(2) = 1e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / -2
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 1383301 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 1383122
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 1383121 TNAKGISKGSLQALACL*S 1383065
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 117 bits (251), Expect(2) = 1e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 1346553 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 1346374
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 1346373 GVANPVIVDQKYCPEKDCPEKKGSK 1346299
Score = 106 bits (226), Expect(2) = 1e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / -1
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 1346313 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 1346134
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 1346133 TNAKGISKGSLQALACL*S 1346077
>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1108H10
Length = 136357
Score = 117 bits (251), Expect(2) = 1e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 106938 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 106759
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 106758 GVANPVIVDQKYCPEKDCPEKKGSK 106684
Score = 106 bits (226), Expect(2) = 1e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / -2
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 106698 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 106519
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 106518 TNAKGISKGSLQALACL*S 106462
>gb|AACV01001330.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001330, whole
genome shotgun sequence
Length = 59730
Score = 117 bits (251), Expect(2) = 1e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 25326 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 25147
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 25146 GVANPVIVDQKYCPEKDCPEKKGSK 25072
Score = 106 bits (226), Expect(2) = 1e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / -1
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 25086 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 24907
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 24906 TNAKGISKGSLQALACL*S 24850
>ref|XM_463287.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1212
Score = 117 bits (251), Expect(2) = 2e-050
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RIKSYED S + A++ ++++ MD
Sbjct: 739 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMD 918
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 919 GVANPVIVDQKYCPEKDCPEKKGSK 993
Score = 105 bits (225), Expect(2) = 2e-050
Identities = 41/78 (52%), Positives = 59/78 (75%)
Frame = +3 / +1
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 979 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 1158
Query: 420 KNAIGKSIGMAKELACV* 473
NA G S G + LAC+*
Sbjct: 1159 TNAKGISKGSLQALACL* 1212
>dbj|AK069989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037D20, full
insert sequence
Length = 1459
Score = 116 bits (248), Expect(2) = 3e-050
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
G GISVG LGR+KDEKDV DV V C L T+NG+RI+SYED S + A++ ++++ MD
Sbjct: 800 GQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIRSYEDVLSPITASRLTFENIRMD 979
Query: 183 NVSYPIIIDQKYCPNNICVKSGASK 257
V+ P+I+DQKYCP C + SK
Sbjct: 980 GVANPVIVDQKYCPEKDCPEKKGSK 1054
Score = 106 bits (226), Expect(2) = 3e-050
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / +2
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 1040 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 1219
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 1220 TNAKGISKGSLQALACL*S 1276
>gb|AU094002.1|AU094002 AU094002 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1822, mRNA sequence
Length = 675
Score = 106 bits (226), Expect(2) = 1e-043
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3 / +2
Query: 240 KSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVC 419
K G+ V + +V F+NI GTSNTPEA++L C++ LPC G++L++V++KY+ DNKTM+VC
Sbjct: 224 KKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDGKDNKTMAVC 403
Query: 420 KNAIGKSIGMAKELACV*T 476
NA G S G + LAC+*+
Sbjct: 404 TNAKGISKGSLQALACL*S 460
Score = 94.1 bits (199), Expect(2) = 1e-043
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +3 / +2
Query: 21 GSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYPI 200
G LGR+KDEK DV V + T+NG+RIKSYED S + A++ ++++ MD V+ P+
Sbjct: 2 GFLGRFKDEKXXTDVTVRRLRVRNTSNGVRIKSYEDVLSPITASRLTFENIRMDGVANPV 181
Query: 201 IIDQKYCPNNICVKSGASK 257
I+DQKYCP C + SK
Sbjct: 182 IVDQKYCPEKDCPEKKGSK 238
>ref|XM_477090.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1386
Score = 104 bits (222), Expect(2) = 9e-033
Identities = 43/102 (42%), Positives = 65/102 (63%)
Frame = +3 / +1
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 326
A ++Q++ MDNV PIIIDQ YC ++ K S V V++++FKNI GTS + EAI L
Sbjct: 1024 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNLLFKNIRGTSASEEAIVL 1203
Query: 327 NCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMA 452
+C+N++PC G+ L NV++ + S C+NA K G++
Sbjct: 1204 HCSNSVPCHGITLENVNLTVKGGSSNAKSTCQNAEWKKSGVS 1329
Score = 59.7 bits (124), Expect(2) = 9e-033
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GTTNG RIK+++ K S K F
Sbjct: 886 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVF 1041
>dbj|AK119482.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-C02, full
insert sequence
Length = 1381
Score = 103 bits (219), Expect(2) = 2e-032
Identities = 42/102 (41%), Positives = 65/102 (63%)
Frame = +3 / +2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 326
A ++Q++ MDNV PIIIDQ YC ++ K S V V++++FKNI GTS + EA L
Sbjct: 764 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNLLFKNIRGTSASEEAFVL 943
Query: 327 NCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMA 452
+C+N++PC+G+ L NV++ + S C+NA K G++
Sbjct: 944 HCSNSVPCRGITLENVNLTVKGGSSNAKSTCQNAEWKKSGVS 1069
Score = 59.7 bits (124), Expect(2) = 2e-032
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GTTNG RIK+++ K S K F
Sbjct: 626 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVF 781
>ref|XM_477087.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1218
Score = 104 bits (221), Expect(2) = 6e-032
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +3 / +1
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 326
A ++Q++ MDNV PIIIDQ YC ++ K S V V++V+FKNI GTS + EAI L
Sbjct: 883 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNVLFKNIRGTSASEEAIML 1062
Query: 327 NCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELAC 467
+C++++PC G+ L NV++ + S C+NA K G C
Sbjct: 1063 HCSSSVPCHGITLENVNLTVKGGSSNAKSTCQNAEWKKSGSVSPQPC 1203
Score = 57.4 bits (119), Expect(2) = 6e-032
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GT NG RIK+++ K S K F
Sbjct: 745 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGKGSAKNIVF 900
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 73.0 bits (153), Expect(3) = 1e-026
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +3 / -2
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ V S V V++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V + +
Sbjct: 5789327 NLVVLYQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDVKLTIKGGGSDA 5789148
Query: 408 MSVCKNAIGKSIGMA 452
S C NA K G+A
Sbjct: 5789147 KSTCGNAKWKKSGIA 5789103
Score = 70.7 bits (148), Expect(3) = 3e-030
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +3 / +2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++++FKNI GTS + EAI L+C+N++PC G+ L NV++ + S C+NA
Sbjct: 5811974 SAVEVSNLLFKNIRGTSASEEAIVLHCSNSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 5812153
Query: 432 GKSIGMA 452
K G++
Sbjct: 5812154 WKKSGVS 5812174
Score = 70.3 bits (147), Expect(3) = 1e-028
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +3 / -1
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++V+FKNI GTS + EAI L+C++++PC G+ L NV++ + S C+NA
Sbjct: 5800734 SAVEVSNVLFKNIRGTSASEEAIMLHCSSSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 5800555
Query: 432 GKSIGMAKELAC 467
K G C
Sbjct: 5800554 WKKSGSVSPQPC 5800519
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GTTNG RIK+++ K S K F
Sbjct: 5811608 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVF 5811763
Score = 57.4 bits (119), Expect(3) = 1e-028
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GT NG RIK+++ K S K F
Sbjct: 5801093 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGKGSAKNIVF 5800938
Score = 52.8 bits (109), Expect(3) = 1e-026
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYE 125
GHGIS+GSLG + E V +V V L GTTNG RIK+++
Sbjct: 5789635 GHGISIGSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQ 5789513
Score = 43.2 bits (88), Expect(3) = 3e-030
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3 / +2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVN 269
A ++Q++ MDNV PIIIDQ YC ++ K KV +N
Sbjct: 5811746 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKVKLN 5811868
Score = 40.5 bits (82), Expect(3) = 1e-028
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / -2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKV 260
A ++Q++ MDNV PIIIDQ YC ++ K KV
Sbjct: 5800955 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKV 5800842
Score = 35.4 bits (71), Expect(3) = 1e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -3
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYC 221
A ++Q++ M+NV PIIIDQ YC
Sbjct: 5789497 AKNIVFQNMIMENVWNPIIIDQNYC 5789423
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057 genomic
scaffold, whole genome shotgun sequence
Length = 3236776
Score = 73.5 bits (154), Expect(3) = 2e-023
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +3 / +3
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ S S V +++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V +
Sbjct: 2958612 NLVFLSQTSAVQISNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLNDVKLTVKGGGGDA 2958791
Query: 408 MSVCKNAIGKSIGMAKELACV*T 476
S C+NA K G C T
Sbjct: 2958792 KSTCRNAKWKKSGTVVPQPCAST 2958860
Score = 73.0 bits (153), Expect(3) = 1e-026
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +3 / -2
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ V S V V++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V + +
Sbjct: 2929824 NLVVLYQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDVKLTIKGGGSDA 2929645
Query: 408 MSVCKNAIGKSIGMA 452
S C NA K G+A
Sbjct: 2929644 KSTCGNAKWKKSGIA 2929600
Score = 70.7 bits (148), Expect(3) = 3e-030
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +3 / +2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++++FKNI GTS + EAI L+C+N++PC G+ L NV++ + S C+NA
Sbjct: 2952473 SAVEVSNLLFKNIRGTSASEEAIVLHCSNSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 2952652
Query: 432 GKSIGMA 452
K G++
Sbjct: 2952653 WKKSGVS 2952673
Score = 70.3 bits (147), Expect(3) = 1e-028
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +3 / -1
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++V+FKNI GTS + EAI L+C++++PC G+ L NV++ + S C+NA
Sbjct: 2941231 SAVEVSNVLFKNIRGTSASEEAIMLHCSSSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 2941052
Query: 432 GKSIGMAKELAC 467
K G C
Sbjct: 2941051 WKKSGSVSPQPC 2941016
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GTTNG RIK+++ K S K F
Sbjct: 2952107 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVF 2952262
Score = 57.4 bits (119), Expect(3) = 1e-028
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GT NG RIK+++ K S K F
Sbjct: 2941590 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGKGSAKNIVF 2941435
Score = 53.8 bits (111), Expect(3) = 2e-023
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V + L GTTNG RIK+++ + K F
Sbjct: 2958304 GHGISIGSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVF 2958459
Score = 52.8 bits (109), Expect(3) = 1e-026
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYE 125
GHGIS+GSLG + E V +V V L GTTNG RIK+++
Sbjct: 2930132 GHGISIGSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQ 2930010
Score = 43.2 bits (88), Expect(3) = 3e-030
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3 / +2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVN 269
A ++Q++ MDNV PIIIDQ YC ++ K KV +N
Sbjct: 2952245 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKVKLN 2952367
Score = 40.5 bits (82), Expect(3) = 1e-028
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / -2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKV 260
A ++Q++ MDNV PIIIDQ YC ++ K KV
Sbjct: 2941452 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKV 2941339
Score = 35.4 bits (71), Expect(3) = 1e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -3
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYC 221
A ++Q++ M+NV PIIIDQ YC
Sbjct: 2929994 AKNIVFQNMIMENVWNPIIIDQNYC 2929920
Score = 23.1 bits (44), Expect(3) = 2e-023
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +3
Query: 164 PGRHHGQRLLPHHHRPEVL 220
P HG+ L P H+R ++L
Sbjct: 2958459 PEHDHGKCLEPRHYRSKLL 2958515
>gb|AU172897.1|AU172897 AU172897 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E40585, mRNA sequence
Length = 449
Score = 136 bits (291), Expect = 3e-030
Identities = 58/85 (68%), Positives = 64/85 (75%)
Frame = +3 / +1
Query: 231 ICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTM 410
IC SG SKVAV D+VFKNI GTS TPEA+TLNCANNLPCQG+QL NVD+KY N +
Sbjct: 1 ICSASGTSKVAVTDMVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVDLKYAGQGNTXL 180
Query: 411 SVCKNAIGKSIGMAKELACV*TYLY 485
SVC N GKS +AKELACV* Y
Sbjct: 181 SVCXNVAGKSSNVAKELACV*FSSY 255
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1559_F09
Length = 87792
Score = 73.5 bits (154), Expect(3) = 2e-023
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +3 / +1
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ S S V +++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V +
Sbjct: 36715 NLVFLSQTSAVQISNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLNDVKLTVKGGGGDA 36894
Query: 408 MSVCKNAIGKSIGMAKELACV*T 476
S C+NA K G C T
Sbjct: 36895 KSTCRNAKWKKSGTVVPQPCAST 36963
Score = 73.0 bits (153), Expect(3) = 1e-026
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +3 / -1
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ V S V V++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V + +
Sbjct: 7929 NLVVLYQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDVKLTIKGGGSDA 7750
Query: 408 MSVCKNAIGKSIGMA 452
S C NA K G+A
Sbjct: 7749 KSTCGNAKWKKSGIA 7705
Score = 70.7 bits (148), Expect(3) = 3e-030
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +3 / +3
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++++FKNI GTS + EAI L+C+N++PC G+ L NV++ + S C+NA
Sbjct: 30576 SAVEVSNLLFKNIRGTSASEEAIVLHCSNSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 30755
Query: 432 GKSIGMA 452
K G++
Sbjct: 30756 WKKSGVS 30776
Score = 70.3 bits (147), Expect(3) = 1e-028
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +3 / -3
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++V+FKNI GTS + EAI L+C++++PC G+ L NV++ + S C+NA
Sbjct: 19336 SAVEVSNVLFKNIRGTSASEEAIMLHCSSSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 19157
Query: 432 GKSIGMAKELAC 467
K G C
Sbjct: 19156 WKKSGSVSPQPC 19121
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GTTNG RIK+++ K S K F
Sbjct: 30210 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVF 30365
Score = 57.4 bits (119), Expect(3) = 1e-028
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GT NG RIK+++ K S K F
Sbjct: 19695 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGKGSAKNIVF 19540
Score = 53.8 bits (111), Expect(3) = 2e-023
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V + L GTTNG RIK+++ + K F
Sbjct: 36407 GHGISIGSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVF 36562
Score = 52.8 bits (109), Expect(3) = 1e-026
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYE 125
GHGIS+GSLG + E V +V V L GTTNG RIK+++
Sbjct: 8237 GHGISIGSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQ 8115
Score = 43.2 bits (88), Expect(3) = 3e-030
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3 / +3
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVN 269
A ++Q++ MDNV PIIIDQ YC ++ K KV +N
Sbjct: 30348 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKVKLN 30470
Score = 40.5 bits (82), Expect(3) = 1e-028
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / -1
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKV 260
A ++Q++ MDNV PIIIDQ YC ++ K KV
Sbjct: 19557 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKV 19444
Score = 35.4 bits (71), Expect(3) = 1e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYC 221
A ++Q++ M+NV PIIIDQ YC
Sbjct: 8099 AKNIVFQNMIMENVWNPIIIDQNYC 8025
Score = 23.1 bits (44), Expect(3) = 2e-023
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 164 PGRHHGQRLLPHHHRPEVL 220
P HG+ L P H+R ++L
Sbjct: 36562 PEHDHGKCLEPRHYRSKLL 36618
>gb|AACV01015402.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015402, whole
genome shotgun sequence
Length = 48933
Score = 73.5 bits (154), Expect(3) = 2e-023
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +3 / +2
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ S S V +++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V +
Sbjct: 42803 NLVFLSQTSAVQISNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLNDVKLTVKGGGGDA 42982
Query: 408 MSVCKNAIGKSIGMAKELACV*T 476
S C+NA K G C T
Sbjct: 42983 KSTCRNAKWKKSGTVVPQPCAST 43051
Score = 73.0 bits (153), Expect(3) = 1e-026
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +3 / -2
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ V S V V++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V + +
Sbjct: 14015 NLVVLYQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDVKLTIKGGGSDA 13836
Query: 408 MSVCKNAIGKSIGMA 452
S C NA K G+A
Sbjct: 13835 KSTCGNAKWKKSGIA 13791
Score = 70.7 bits (148), Expect(3) = 3e-030
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +3 / +1
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++++FKNI GTS + EAI L+C+N++PC G+ L NV++ + S C+NA
Sbjct: 36664 SAVEVSNLLFKNIRGTSASEEAIVLHCSNSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 36843
Query: 432 GKSIGMA 452
K G++
Sbjct: 36844 WKKSGVS 36864
Score = 70.3 bits (147), Expect(3) = 1e-028
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +3 / -1
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V V++V+FKNI GTS + EAI L+C++++PC G+ L NV++ + S C+NA
Sbjct: 25422 SAVEVSNVLFKNIRGTSASEEAIMLHCSSSVPCHGITLENVNLTVKGGSSNAKSTCQNAE 25243
Query: 432 GKSIGMAKELAC 467
K G C
Sbjct: 25242 WKKSGSVSPQPC 25207
Score = 59.7 bits (124), Expect(3) = 3e-030
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GTTNG RIK+++ K S K F
Sbjct: 36298 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVF 36453
Score = 57.4 bits (119), Expect(3) = 1e-028
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3 / -2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V V L GT NG RIK+++ K S K F
Sbjct: 25781 GHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGKGSAKNIVF 25626
Score = 53.8 bits (111), Expect(3) = 2e-023
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +3 / +3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V + L GTTNG RIK+++ + K F
Sbjct: 42495 GHGISIGSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVF 42650
Score = 52.8 bits (109), Expect(3) = 1e-026
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3 / -3
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYE 125
GHGIS+GSLG + E V +V V L GTTNG RIK+++
Sbjct: 14323 GHGISIGSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQ 14201
Score = 43.2 bits (88), Expect(3) = 3e-030
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3 / +1
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVN 269
A ++Q++ MDNV PIIIDQ YC ++ K KV +N
Sbjct: 36436 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKVKLN 36558
Score = 40.5 bits (82), Expect(3) = 1e-028
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / -2
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKV 260
A ++Q++ MDNV PIIIDQ YC ++ K KV
Sbjct: 25643 AKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQVYKV 25530
Score = 35.4 bits (71), Expect(3) = 1e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -3
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYC 221
A ++Q++ M+NV PIIIDQ YC
Sbjct: 14185 AKNIVFQNMIMENVWNPIIIDQNYC 14111
Score = 23.1 bits (44), Expect(3) = 2e-023
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +2
Query: 164 PGRHHGQRLLPHHHRPEVL 220
P HG+ L P H+R ++L
Sbjct: 42650 PEHDHGKCLEPRHYRSKLL 42706
>ref|XM_477085.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1269
Score = 101 bits (215), Expect(2) = 9e-030
Identities = 45/102 (44%), Positives = 62/102 (60%)
Frame = +3 / +1
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 326
A ++Q++ M+NV PIIIDQ YC + K S V V++VVFKNI GTS + EAI L
Sbjct: 949 AKNIVFQNMIMENVWNPIIIDQNYCDSATPCKEQTSAVQVSNVVFKNIRGTSASKEAIKL 1128
Query: 327 NCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMA 452
+C+ N+PCQG+ L +V + + S C NA K G+A
Sbjct: 1129 DCSRNVPCQGITLKDVKLTIKGGGSDAKSTCGNAKWKKSGIA 1254
Score = 52.8 bits (109), Expect(2) = 9e-030
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYE 125
GHGIS+GSLG + E V +V V L GTTNG RIK+++
Sbjct: 811 GHGISIGSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQ 933
>ref|XM_477091.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1290
Score = 100 bits (212), Expect(2) = 1e-029
Identities = 44/110 (40%), Positives = 62/110 (56%)
Frame = +3 / +1
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 326
A ++Q++ M+NV P+IIDQ YC + K S V +++VVFKNI GTS + EAI L
Sbjct: 949 AKYIVFQNMIMENVWNPVIIDQNYCDSATPCKKQTSAVQISNVVFKNIRGTSASKEAIKL 1128
Query: 327 NCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAIGKSIGMAKELACV*T 476
+C+ N+PCQG+ L +V + S C+NA K G C T
Sbjct: 1129 DCSRNVPCQGITLNDVKLTVKGGGGDAKSTCRNAKWKKSGTVVPQPCAST 1278
Score = 53.8 bits (111), Expect(2) = 1e-029
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +3 / +1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKF 158
GHGIS+GSLG + E V +V + L GTTNG RIK+++ + K F
Sbjct: 811 GHGISIGSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVF 966
>dbj|AK069803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027O10, full
insert sequence
Length = 1946
Score = 126 bits (269), Expect(2) = 2e-029
Identities = 54/110 (49%), Positives = 70/110 (63%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHG+SVGSLGRY E DV + V T GT NG+RIK++E+S + A L++++ M+
Sbjct: 1073 GHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMN 1252
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNC 332
+V PIIIDQKYCP C S V + DV FKNI GT+ T A+ L C
Sbjct: 1253 DVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIKGTATTQVAVLLKC 1402
Score = 27.2 bits (53), Expect(2) = 2e-029
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 342 LPCQGVQLINVDIKY 386
+PCQGV L +VD++Y
Sbjct: 1406 VPCQGVVLQDVDLRY 1450
>ref|XM_481636.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1947
Score = 126 bits (269), Expect(2) = 2e-029
Identities = 54/110 (49%), Positives = 70/110 (63%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHG+SVGSLGRY E DV + V T GT NG+RIK++E+S + A L++++ M+
Sbjct: 1073 GHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMN 1252
Query: 183 NVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNC 332
+V PIIIDQKYCP C S V + DV FKNI GT+ T A+ L C
Sbjct: 1253 DVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIKGTATTQVAVLLKC 1402
Score = 27.2 bits (53), Expect(2) = 2e-029
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 342 LPCQGVQLINVDIKY 386
+PCQGV L +VD++Y
Sbjct: 1406 VPCQGVVLQDVDLRY 1450
>gb|AU172932.1|AU172932 AU172932 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E41143, mRNA sequence
Length = 441
Score = 131 bits (280), Expect = 9e-029
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = +3 / +2
Query: 243 SGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCK 422
SG SKVAV D+VFKNI GTS TP A+TLNCANNLPCQG+QL NVD+KY N T+SVC
Sbjct: 5 SGTSKVAVTDMVFKNIVGTSATPXAVTLNCANNLPCQGIQLHNVDLKYAGQGNTTLSVCX 184
Query: 423 NAIGKSIGMAKELACV*TYLY 485
N GKS +AKELACV* Y
Sbjct: 185 NVAGKSSNVAKELACV*FSSY 247
>dbj|AK119501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E08, full
insert sequence
Length = 1456
Score = 66.1 bits (138), Expect(3) = 5e-028
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +3 / +2
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKA 149
GHGISVGSLGR E DV ++V+ CT+AGT NG+RIK++ + S A
Sbjct: 788 GHGISVGSLGRSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAA 934
Score = 62.9 bits (131), Expect(3) = 5e-028
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +3 / +2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKTMSVCKNAI 431
S V ++DV F+NI G S T A+ L+C+ PC+G++L ++D++Y R T+S C N
Sbjct: 1067 SVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGMELRDIDLRYVRRGVATVSRCANVA 1246
Query: 432 GKSIG 446
G G
Sbjct: 1247 GGVAG 1261
Score = 37.3 bits (75), Expect(3) = 5e-028
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3 / +2
Query: 159 LYQDVTMDNVSYPIIIDQKYCPNNIC 236
+++D+ M V PIIIDQ+YCP C
Sbjct: 965 VFEDIVMRRVRNPIIIDQEYCPYLSC 1042
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1119_B04
Length = 151721
Score = 73.0 bits (153), Expect(3) = 1e-026
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +3 / -3
Query: 228 NICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNKT 407
N+ V S V V++VVFKNI GTS + EAI L+C+ N+PCQG+ L +V + +
Sbjct: 140283 NLVVLYQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDVKLTIKGGGSDA 140104
Query: 408 MSVCKNAIGKSIGMA 452
S C NA K G+A
Sbjct: 140103 KSTCGNAKWKKSGIA 140059
Score = 52.8 bits (109), Expect(3) = 1e-026
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYE 125
GHGIS+GSLG + E V +V V L GTTNG RIK+++
Sbjct: 140591 GHGISIGSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQ 140469
Score = 35.4 bits (71), Expect(3) = 1e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -1
Query: 147 ATKFLYQDVTMDNVSYPIIIDQKYC 221
A ++Q++ M+NV PIIIDQ YC
Sbjct: 140453 AKNIVFQNMIMENVWNPIIIDQNYC 140379
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0670E08
Length = 133106
Score = 96.8 bits (205), Expect(3) = 6e-026
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHG+SVGSLGRY E DV + V T GT NG+RIK++E+S + A L++++ M+
Sbjct: 42152 GHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMN 41973
Query: 183 NVSYPIIIDQKYCPNNIC 236
+V PIIIDQKYCP C
Sbjct: 41972 DVQNPIIIDQKYCPYYNC 41919
Score = 35.0 bits (70), Expect(3) = 6e-026
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3 / -2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNC 332
S V + DV FKNI GT+ T A+ L C
Sbjct: 41830 SGVTIKDVQFKNIKGTATTQVAVLLKC 41750
Score = 27.2 bits (53), Expect(3) = 6e-026
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 342 LPCQGVQLINVDIKY 386
+PCQGV L +VD++Y
Sbjct: 41746 VPCQGVVLQDVDLRY 41702
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1136_A10
Length = 101249
Score = 96.8 bits (205), Expect(3) = 6e-026
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHG+SVGSLGRY E DV + V T GT NG+RIK++E+S + A L++++ M+
Sbjct: 100949 GHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMN 100770
Query: 183 NVSYPIIIDQKYCPNNIC 236
+V PIIIDQKYCP C
Sbjct: 100769 DVQNPIIIDQKYCPYYNC 100716
Score = 35.0 bits (70), Expect(3) = 6e-026
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3 / -2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNC 332
S V + DV FKNI GT+ T A+ L C
Sbjct: 100627 SGVTIKDVQFKNIKGTATTQVAVLLKC 100547
Score = 27.2 bits (53), Expect(3) = 6e-026
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 342 LPCQGVQLINVDIKY 386
+PCQGV L +VD++Y
Sbjct: 100543 VPCQGVVLQDVDLRY 100499
>dbj|AP003867.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1111_B02,
*** SEQUENCING IN PROGRESS ***
Length = 96360
Score = 96.8 bits (205), Expect(3) = 6e-026
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = +3 / -1
Query: 3 GHGISVGSLGRYKDEKDVEDVKVTGCTLAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMD 182
GHG+SVGSLGRY E DV + V T GT NG+RIK++E+S + A L++++ M+
Sbjct: 52059 GHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMN 51880
Query: 183 NVSYPIIIDQKYCPNNIC 236
+V PIIIDQKYCP C
Sbjct: 51879 DVQNPIIIDQKYCPYYNC 51826
Score = 35.0 bits (70), Expect(3) = 6e-026
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3 / -2
Query: 252 SKVAVNDVVFKNIHGTSNTPEAITLNC 332
S V + DV FKNI GT+ T A+ L C
Sbjct: 51737 SGVTIKDVQFKNIKGTATTQVAVLLKC 51657
Score = 27.2 bits (53), Expect(3) = 6e-026
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 342 LPCQGVQLINVDIKY 386
+PCQGV L +VD++Y
Sbjct: 51653 VPCQGVVLQDVDLRY 51609
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,661,817,130
Number of Sequences: 438736
Number of extensions: 27662353
Number of successful extensions: 201219
Number of sequences better than 1.0e-020: 79
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 140744125635
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)