TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071483.2.1
(531 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU183327.1|AU183327 AU183327 Rice cDNA from immature lea... 221 5e-056
ref|XM_475631.1| Oryza sativa (japonica cultivar-group), p... 221 6e-056
gb|AU165717.1|AU165717 AU165717 Rice panicle at flowering s... 219 2e-055
gb|AC104276.2| Oryza sativa (japonica cultivar-group) chrom... 207 9e-052
gb|AC137614.2| Oryza sativa (japonica cultivar-group) chrom... 207 9e-052
gb|AACV01010931.1| Oryza sativa (japonica cultivar-group) c... 207 9e-052
gb|AC119288.4| Oryza sativa (japonica cultivar-group) chrom... 207 9e-052
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 207 9e-052
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 207 9e-052
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 207 9e-052
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 207 9e-052
gb|CV721477.1|CV721477 YBH--04-E01.b1 Rice before heading y... 193 9e-048
gb|CV721494.1|CV721494 YBH--04-F01.b1 Rice before heading y... 193 9e-048
gb|AU184299.1|AU184299 AU184299 Rice root Oryza sativa (jap... 170 1e-040
gb|AU184331.1|AU184331 AU184331 Rice root Oryza sativa (jap... 170 1e-040
dbj|AK110485.1| Oryza sativa (japonica cultivar-group) cDNA... 117 4e-040
gb|AU182519.1|AU182519 AU182519 Rice panicle at flowering s... 168 5e-040
ref|XM_472424.1| Oryza sativa (japonica cultivar-group), p... 115 6e-040
gb|CA756111.1|CA756111 BR030035000_PLATE_C06_43_040.ab1 OA ... 117 2e-039
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 101 4e-037
ref|NT_107198.1| Oryza sativa (japonica cultivar-group) 101 4e-037
emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromoso... 101 4e-037
emb|AL606451.1|OSJN00006 Oryza sativa (japonica cultivar-gr... 101 4e-037
gb|AACV01009713.1| Oryza sativa (japonica cultivar-group) c... 101 4e-037
dbj|AK062916.1| Oryza sativa (japonica cultivar-group) cDNA... 155 3e-036
dbj|AK105208.1| Oryza sativa (japonica cultivar-group) cDNA... 155 3e-036
ref|XM_472425.1| Oryza sativa (japonica cultivar-group), p... 98 7e-035
gb|CV721235.1|CV721235 YBH--03-G09.b1 Rice before heading y... 98 1e-034
gb|CV721634.1|CV721634 YBH--04-M15.b1 Rice before heading y... 98 1e-034
gb|AU182670.1|AU182670 AU182670 Rice panicle (longer than 1... 149 3e-034
gb|AU184419.1|AU184419 AU184419 Rice root Oryza sativa (jap... 148 5e-034
gb|CV720933.1|CV720933 YBH--02-F09.b1 Rice before heading y... 93 4e-033
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 144 5e-033
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 144 5e-033
dbj|AP004127.1| Oryza sativa (japonica cultivar-group) geno... 144 5e-033
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 144 5e-033
gb|CV721396.1|CV721396 YBH--03-P10.b1 Rice before heading y... 89 9e-032
gb|AU183328.1|AU183328 AU183328 Rice cDNA from immature lea... 137 8e-031
gb|C99088.1|C99088 C99088 Rice panicle at flowering stage O... 98 1e-029
gb|AU183333.1|AU183333 AU183333 Rice cDNA from immature lea... 93 2e-028
gb|CV721865.1|CV721865 YBH--05-J14.b1 Rice before heading y... 72 6e-027
gb|AU064186.1|AU064186 AU064186 Rice panicle at flowering s... 110 1e-024
gb|CD670686.1|CD670686 OsMR101 5MT resistant rice mutant cD... 112 2e-023
gb|AACV01002674.1| Oryza sativa (japonica cultivar-group) c... 111 6e-023
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 111 6e-023
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 111 6e-023
gb|D24434.1|D24434 RICR1885A Rice root Oryza sativa (japoni... 99 6e-022
>gb|AU183327.1|AU183327 AU183327 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61684, mRNA sequence
Length = 444
Score = 221 bits (477), Expect = 5e-056
Identities = 88/100 (88%), Positives = 93/100 (93%)
Frame = -2 / +2
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 128 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 307
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMK 219
TAR AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* ++
Sbjct: 308 TARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 427
Score = 188 bits (405), Expect = 4e-046
Identities = 82/96 (85%), Positives = 85/96 (88%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL
Sbjct: 414 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLL 235
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATP 519
G DCGSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 234 DGADCGSSAADTHGASRSATRSADALPHSPAPSAAP 127
Score = 180 bits (388), Expect = 9e-044
Identities = 74/104 (71%), Positives = 79/104 (75%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 428 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 249
Query: 398 SSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
SSSC +A TAGR P AP+ APP RR SRT P RR R
Sbjct: 248 SSSCSTAPTAGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 117
Score = 166 bits (356), Expect = 2e-039
Identities = 74/103 (71%), Positives = 80/103 (77%)
Frame = -1 / +1
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 118 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 297
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRRLHAAL E
Sbjct: 298 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRRLHAALTLE 426
Score = 110 bits (234), Expect = 2e-022
Identities = 51/93 (54%), Positives = 53/93 (56%)
Frame = +3 / -3
Query: 234 QRVISALVADGAVGHVAALGDGNGDLRLDPGSPXXXXXXXXXXXXXXLPDGVHXXXXXXX 413
QRVISALVADGAVGHVAALGDG+GDLRLDPG P LPDGVH
Sbjct: 412 QRVISALVADGAVGHVAALGDGDGDLRLDPGDPGRVGQHHGAQAAGALPDGVHRRAAAAR 233
Query: 414 XXXXXXXXXXDAWRHP*RHPVGGGSPALPRAMR 512
A R P RHPVGG PAL A+R
Sbjct: 232 RRRLRVVRRRHARRQPQRHPVGGRPPALAGALR 134
>ref|XM_475631.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 354
Score = 221 bits (476), Expect = 6e-056
Identities = 88/97 (90%), Positives = 91/97 (93%)
Frame = -2 / +1
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 64 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 243
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 228
TAR AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*
Sbjct: 244 TARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 354
Score = 188 bits (405), Expect = 4e-046
Identities = 82/96 (85%), Positives = 85/96 (88%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL
Sbjct: 350 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLL 171
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATP 519
G DCGSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 170 DGADCGSSAADTHGASRSATRSADALPHSPAPSAAP 63
Score = 178 bits (384), Expect = 3e-043
Identities = 73/100 (73%), Positives = 77/100 (77%)
Frame = +2 / -3
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSC 409
+AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC
Sbjct: 352 KAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSC 173
Query: 410 WSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
+A TAGR P AP+ APP RR SRT P RR R
Sbjct: 172 STAPTAGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 53
Score = 165 bits (355), Expect = 3e-039
Identities = 73/100 (73%), Positives = 79/100 (79%)
Frame = -1 / +3
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 54 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 233
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAAL 229
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRRLHAAL
Sbjct: 234 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRRLHAAL 353
Score = 110 bits (234), Expect = 2e-022
Identities = 51/93 (54%), Positives = 53/93 (56%)
Frame = +3 / -1
Query: 234 QRVISALVADGAVGHVAALGDGNGDLRLDPGSPXXXXXXXXXXXXXXLPDGVHXXXXXXX 413
QRVISALVADGAVGHVAALGDG+GDLRLDPG P LPDGVH
Sbjct: 348 QRVISALVADGAVGHVAALGDGDGDLRLDPGDPGRVGQHHGAQAAGALPDGVHRRAAAAR 169
Query: 414 XXXXXXXXXXDAWRHP*RHPVGGGSPALPRAMR 512
A R P RHPVGG PAL A+R
Sbjct: 168 RRRLRVVRRRHARRQPQRHPVGGRPPALAGALR 70
>gb|AU165717.1|AU165717 AU165717 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4182, mRNA sequence
Length = 676
Score = 219 bits (473), Expect = 2e-055
Identities = 87/100 (87%), Positives = 92/100 (92%)
Frame = -2 / +1
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 148 GAXEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 327
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMK 219
TAR AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* ++
Sbjct: 328 TARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*PLR 447
Score = 186 bits (401), Expect = 1e-045
Identities = 81/96 (84%), Positives = 84/96 (87%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL
Sbjct: 434 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLL 255
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATP 519
G DCGSSAA+ HGA SAT SA+ALPHSP P P
Sbjct: 254 DGADCGSSAADTHGASRSATRSADALPHSPAPSXAP 147
Score = 173 bits (373), Expect = 1e-041
Identities = 69/93 (74%), Positives = 74/93 (79%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 448 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 269
Query: 398 SSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSC +A TAGR P P+ APP RR SRT
Sbjct: 268 SSSCSTAPTAGRPPPTRTVPAAAPPGRRTPSRT 170
Score = 160 bits (343), Expect = 1e-037
Identities = 69/92 (75%), Positives = 75/92 (81%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQ 316
VRE +RR GGA G + +G RPAV A +QLLL AHHRAEPQLPVRR AV+H QG RDQ
Sbjct: 171 VREGVRRPGGAAAGTVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRDAVQHGQGRRDQ 350
Query: 315 AGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
AGGRH+HPQALQHGRPPRRLQVRRLHAAL E
Sbjct: 351 AGGRHHHPQALQHGRPPRRLQVRRLHAALTLE 446
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08,
complete sequence
Length = 118049
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / -3
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 47691 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 47512
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 47511 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 47419
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / +2
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 47420 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 47599
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 47600 GSSAADTHGASRSATRSADALPHSPAPSAAP 47692
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / +3
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 47418 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 47597
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 47598 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 47702
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / -2
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 47701 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 47522
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 47521 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 47417
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0034O12, complete sequence
Length = 156263
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / -1
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 46040 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 45861
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 45860 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 45768
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / +1
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 45769 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 45948
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 45949 GSSAADTHGASRSATRSADALPHSPAPSAAP 46041
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / +2
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 45767 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 45946
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 45947 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 46051
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / -3
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 46050 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 45871
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 45870 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 45766
>gb|AACV01010931.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010931, whole
genome shotgun sequence
Length = 25588
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / +1
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 4546 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 4725
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 4726 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 4818
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / -3
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 4817 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 4638
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 4637 GSSAADTHGASRSATRSADALPHSPAPSAAP 4545
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / -1
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 4819 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 4640
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 4639 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 4535
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / +3
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 4536 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 4715
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 4716 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 4820
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22,
complete sequence
Length = 177153
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / -3
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 109891 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 109712
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 109711 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 109619
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / +3
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 109620 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 109799
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 109800 GSSAADTHGASRSATRSADALPHSPAPSAAP 109892
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / +1
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 109618 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 109797
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 109798 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 109902
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / -2
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 109901 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 109722
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 109721 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 109617
>ref|NT_107216.1| Oryza sativa (japonica cultivar-group)
Length = 2910826
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / -2
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 2570796 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 2570617
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 2570616 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 2570524
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / +2
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 2570525 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 2570704
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 2570705 GSSAADTHGASRSATRSADALPHSPAPSAAP 2570797
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / +3
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 2570523 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 2570702
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 2570703 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 2570807
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / -1
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 2570806 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 2570627
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 2570626 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 2570522
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / -3
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 3491770 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 3491591
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 3491590 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 3491498
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / +3
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 3491499 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 3491678
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 3491679 GSSAADTHGASRSATRSADALPHSPAPSAAP 3491771
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / +1
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 3491497 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 3491676
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 3491677 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 3491781
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / -2
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 3491780 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 3491601
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 3491600 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 3491496
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / -1
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 3491770 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 3491591
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 3491590 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 3491498
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / +3
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 3491499 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 3491678
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 3491679 GSSAADTHGASRSATRSADALPHSPAPSAAP 3491771
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / +1
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 3491497 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 3491676
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 3491677 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 3491781
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / -3
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 3491780 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 3491601
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 3491600 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 3491496
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 207 bits (446), Expect = 9e-052
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2 / -2
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGRASADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS
Sbjct: 3480409 GAAEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSN 3480230
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
TAR AGIKPEVAITIPKRCNMADRPVGYKCG
Sbjct: 3480229 TARVAGIKPEVAITIPKRCNMADRPVGYKCG 3480137
Score = 179 bits (386), Expect = 2e-043
Identities = 77/91 (84%), Positives = 80/91 (87%)
Frame = +1 / +3
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL G DC
Sbjct: 3480138 PHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLLDGADC 3480317
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXPCATP 519
GSSAA+ HGA SAT SA+ALPHSP P A P
Sbjct: 3480318 GSSAADTHGASRSATRSADALPHSPAPSAAP 3480410
Score = 167 bits (359), Expect = 9e-040
Identities = 69/95 (72%), Positives = 72/95 (75%)
Frame = +2 / +1
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWT 424
LRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA SSSC +A T
Sbjct: 3480136 LRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPPSSSCSTAPT 3480315
Query: 425 AGRRQPRCMAPSLAPPCRRRLSRTPPXHAPHRRSR 529
AGR P AP+ APP RR SRT P RR R
Sbjct: 3480316 AGRPPPTRTAPAAAPPGRRTPSRTRRRPPPPRRRR 3480420
Score = 154 bits (331), Expect = 6e-036
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -1 / -1
Query: 528 RDRRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRH 349
R RR G VRE +RR GGA GA+ +G RPAV A +QLLL AHHRAEPQLPVRR
Sbjct: 3480419 RRRRGGGGRRRVREGVRRPGGAAAGAVRVGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRD 3480240
Query: 348 AVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRR
Sbjct: 3480239 AVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRR 3480135
>gb|CV721477.1|CV721477 YBH--04-E01.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-E01, mRNA sequence
Length = 460
Score = 193 bits (417), Expect = 9e-048
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = -2 / +3
Query: 482 SADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVA 303
+ADRVALR+APC+SAADDPQS P+S CCSAVHTIGQSPSCLCAVMLS TAR AGIKPEVA
Sbjct: 33 AADRVALRLAPCVSAADDPQSAPSSICCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVA 212
Query: 302 ITIPKRCNMADRPVGYKCGDYTLP*LMK 219
ITIPKRCNMADRPVGYKCGDYTLP* ++
Sbjct: 213 ITIPKRCNMADRPVGYKCGDYTLP*PLR 296
Score = 168 bits (362), Expect = 3e-040
Identities = 66/88 (75%), Positives = 71/88 (80%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 297 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 118
Query: 398 SSSCWSAWTAGRRQPRCMAPSLAPPCRR 481
SS C +A TAGR P AP+ APP RR
Sbjct: 117 SSRCSTAPTAGRPPPTRTAPAAAPPGRR 34
Score = 163 bits (350), Expect = 2e-038
Identities = 72/83 (86%), Positives = 75/83 (90%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQ+L
Sbjct: 283 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQML 104
Query: 412 VGVDCGSSAAEMHGAILSATLSA 480
G DCGSSAA+ HGA SAT SA
Sbjct: 103 DGADCGSSAADTHGASRSATRSA 35
Score = 152 bits (327), Expect = 2e-035
Identities = 66/87 (75%), Positives = 71/87 (81%)
Frame = -1 / +2
Query: 480 RRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRH 301
RR GGA GA+ +G RPAV A + LLL AHHRAEPQLPVRR AV+H QG RDQAGGRH
Sbjct: 35 RRPGGAAAGAVRVGGGRPAVGAVEHLLLGGAHHRAEPQLPVRRDAVQHGQGRRDQAGGRH 214
Query: 300 YHPQALQHGRPPRRLQVRRLHAALADE 220
+HPQALQHGRPPRRLQVRRLHAAL E
Sbjct: 215 HHPQALQHGRPPRRLQVRRLHAALTLE 295
>gb|CV721494.1|CV721494 YBH--04-F01.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-F01, mRNA sequence
Length = 460
Score = 193 bits (417), Expect = 9e-048
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = -2 / +3
Query: 482 SADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVA 303
+ADRVALR+APC+SAADDPQS P+S CCSAVHTIGQSPSCLCAVMLS TAR AGIKPEVA
Sbjct: 33 AADRVALRLAPCVSAADDPQSAPSSICCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVA 212
Query: 302 ITIPKRCNMADRPVGYKCGDYTLP*LMK 219
ITIPKRCNMADRPVGYKCGDYTLP* ++
Sbjct: 213 ITIPKRCNMADRPVGYKCGDYTLP*PLR 296
Score = 168 bits (362), Expect = 3e-040
Identities = 66/88 (75%), Positives = 71/88 (80%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 297 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 118
Query: 398 SSSCWSAWTAGRRQPRCMAPSLAPPCRR 481
SS C +A TAGR P AP+ APP RR
Sbjct: 117 SSRCSTAPTAGRPPPTRTAPAAAPPGRR 34
Score = 163 bits (350), Expect = 2e-038
Identities = 72/83 (86%), Positives = 75/83 (90%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQ+L
Sbjct: 283 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQML 104
Query: 412 VGVDCGSSAAEMHGAILSATLSA 480
G DCGSSAA+ HGA SAT SA
Sbjct: 103 DGADCGSSAADTHGASRSATRSA 35
Score = 152 bits (327), Expect = 2e-035
Identities = 66/87 (75%), Positives = 71/87 (81%)
Frame = -1 / +2
Query: 480 RRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRH 301
RR GGA GA+ +G RPAV A + LLL AHHRAEPQLPVRR AV+H QG RDQAGGRH
Sbjct: 35 RRPGGAAAGAVRVGGGRPAVGAVEHLLLGGAHHRAEPQLPVRRDAVQHGQGRRDQAGGRH 214
Query: 300 YHPQALQHGRPPRRLQVRRLHAALADE 220
+HPQALQHGRPPRRLQVRRLHAAL E
Sbjct: 215 HHPQALQHGRPPRRLQVRRLHAALTLE 295
>gb|AU184299.1|AU184299 AU184299 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1885, mRNA sequence
Length = 449
Score = 170 bits (365), Expect = 1e-040
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = -2 / +1
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS TAR AGIKPEVAITIPKRCNMADRP
Sbjct: 1 SAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRP 180
Query: 263 VGYKCGDYTLP*LMK 219
VGYKCGDYTLP* ++
Sbjct: 181 VGYKCGDYTLP*PLR 225
Score = 156 bits (336), Expect = 1e-036
Identities = 60/75 (80%), Positives = 64/75 (85%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 226 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 47
Query: 398 SSSCWSAWTAGRRQP 442
SSSC +A TAGR P
Sbjct: 46 SSSCSTAPTAGRPPP 2
Score = 148 bits (318), Expect = 4e-034
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL
Sbjct: 212 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLL 33
Query: 412 VGVDCGSSAA 441
G DCGSSAA
Sbjct: 32 DGADCGSSAA 3
Score = 139 bits (298), Expect = 2e-031
Identities = 60/74 (81%), Positives = 63/74 (85%)
Frame = -1 / +3
Query: 441 GCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPR 262
G RPAV A +QLLL AHHRAEPQLPVRR AV+H QG RDQAGGRH+HPQALQHGRPPR
Sbjct: 3 GGGRPAVGAVEQLLLGGAHHRAEPQLPVRRDAVQHGQGRRDQAGGRHHHPQALQHGRPPR 182
Query: 261 RLQVRRLHAALADE 220
RLQVRRLHAAL E
Sbjct: 183 RLQVRRLHAALTLE 224
>gb|AU184331.1|AU184331 AU184331 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1979, mRNA sequence
Length = 451
Score = 170 bits (365), Expect = 1e-040
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = -2 / +3
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
SAADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS TAR AGIKPEVAITIPKRCNMADRP
Sbjct: 3 SAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRP 182
Query: 263 VGYKCGDYTLP*LMK 219
VGYKCGDYTLP* ++
Sbjct: 183 VGYKCGDYTLP*PLR 227
Score = 156 bits (336), Expect = 1e-036
Identities = 60/75 (80%), Positives = 64/75 (85%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 228 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 49
Query: 398 SSSCWSAWTAGRRQP 442
SSSC +A TAGR P
Sbjct: 48 SSSCSTAPTAGRPPP 4
Score = 149 bits (320), Expect = 2e-034
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL
Sbjct: 214 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLL 35
Query: 412 VGVDCGSSAAE 444
G DCGSSAA+
Sbjct: 34 DGADCGSSAAD 2
Score = 139 bits (299), Expect = 2e-031
Identities = 60/75 (80%), Positives = 64/75 (85%)
Frame = -1 / +2
Query: 444 LGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPP 265
+G RPAV A +QLLL AHHRAEPQLPVRR AV+H QG RDQAGGRH+HPQALQHGRPP
Sbjct: 2 VGGGRPAVGAVEQLLLGGAHHRAEPQLPVRRDAVQHGQGRRDQAGGRHHHPQALQHGRPP 181
Query: 264 RRLQVRRLHAALADE 220
RRLQVRRLHAAL E
Sbjct: 182 RRLQVRRLHAALTLE 226
>dbj|AK110485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-B02, full
insert sequence
Length = 3096
Score = 117 bits (251), Expect(2) = 2e-027
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +1
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 2584 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 2763
Query: 263 VGYKCGDYTLP*LMKTSS 210
VGYKCGDYTLP* K+++
Sbjct: 2764 VGYKCGDYTLP*ATKSTA 2817
Score = 106 bits (227), Expect(2) = 2e-035
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = +2 / -3
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A CNLRTCSRRGGR CCSAWGW*WRP A*SR+ W C TA*RR G+WGSA
Sbjct: 2794 AECNLRTCSRRGGRRCCSAWGW*WRPRA*SRRSWSCWTA*RRRGTWGSA 2648
Score = 105 bits (223), Expect(2) = 4e-040
Identities = 40/57 (70%), Positives = 50/57 (87%)
Frame = -1 / +3
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADED 217
H AEPQ+P+RRHAV+H Q RDQA GRH+HPQALQH RPPRRLQVRRLH+A+++++
Sbjct: 2640 HWEAEPQVPLRRHAVQHDQERRDQARGRHHHPQALQHRRPPRRLQVRRLHSAMSNKE 2810
Score = 98.2 bits (208), Expect(2) = 1e-023
Identities = 44/54 (81%), Positives = 47/54 (87%)
Frame = +1 / -2
Query: 217 VFIS*GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
+F++ G V*SPHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 2810 LFVAHGRV*SPHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 2649
Score = 83.5 bits (176), Expect(2) = 4e-040
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 2497 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 2649
Score = 66.1 bits (138), Expect(2) = 2e-035
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -2
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 2645 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 2496
Score = 35.0 bits (70), Expect(2) = 1e-023
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2 / -3
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR +++WCA S+ +A T G P AP+ AP C RTP P
Sbjct: 2671 RRGTWGSASQWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 2510
Score = 28.1 bits (55), Expect(2) = 2e-027
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 2513 RTVQGSAGRRRRTRWR*SWR 2572
>gb|AU182519.1|AU182519 AU182519 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3418, mRNA sequence
Length = 453
Score = 168 bits (361), Expect = 5e-040
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = -2 / +1
Query: 440 AADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPV 261
AADDPQS P+SSCCSAVHTIGQSPSCLCAVMLS TAR AGIKPEVAITIPKRCNMADRPV
Sbjct: 1 AADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPV 180
Query: 260 GYKCGDYTLP*LMK 219
GYKCGDYTLP* ++
Sbjct: 181 GYKCGDYTLP*PLR 222
Score = 155 bits (332), Expect = 5e-036
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +2 / -3
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 223 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 44
Query: 398 SSSCWSAWTAGR 433
SSSC +A TAGR
Sbjct: 43 SSSCSTAPTAGR 8
Score = 146 bits (314), Expect = 1e-033
Identities = 64/69 (92%), Positives = 65/69 (94%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL
Sbjct: 209 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLL 30
Query: 412 VGVDCGSSA 438
G DCGSSA
Sbjct: 29 DGADCGSSA 3
Score = 138 bits (297), Expect = 3e-031
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -1 / +3
Query: 432 RPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQ 253
RPAV A +QLLL AHHRAEPQLPVRR AV+H QG RDQAGGRH+HPQALQHGRPPRRLQ
Sbjct: 9 RPAVGAVEQLLLGGAHHRAEPQLPVRRDAVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQ 188
Query: 252 VRRLHAALADE 220
VRRLHAAL E
Sbjct: 189 VRRLHAALTLE 221
>ref|XM_472424.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 351
Score = 115 bits (245), Expect(2) = 7e-027
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = -2 / +1
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 136 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 315
Query: 263 VGYKCGDYTLP* 228
VGYKCGDYTLP*
Sbjct: 316 VGYKCGDYTLP* 351
Score = 106 bits (227), Expect(3) = 3e-036
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = +2 / -3
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A CNLRTCSRRGGR CCSAWGW*WRP A*SR+ W C TA*RR G+WGSA
Sbjct: 346 AECNLRTCSRRGGRRCCSAWGW*WRPRA*SRRSWSCWTA*RRRGTWGSA 200
Score = 103 bits (220), Expect(2) = 6e-040
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = -1 / +3
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAAL 229
H AEPQ+P+RRHAV+H Q RDQA GRH+HPQALQH RPPRRLQVRRLH+A+
Sbjct: 192 HREAEPQVPLRRHAVQHDQERRDQARGRHHHPQALQHRRPPRRLQVRRLHSAM 350
Score = 95.0 bits (201), Expect(2) = 2e-023
Identities = 43/49 (87%), Positives = 43/49 (87%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V*SPHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 347 GRV*SPHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 201
Score = 83.5 bits (176), Expect(2) = 6e-040
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 49 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 201
Score = 66.1 bits (138), Expect(3) = 3e-036
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -2
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 197 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 48
Score = 36.8 bits (74), Expect(2) = 2e-023
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2 / -3
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR ++RWCA S+ +A T G P AP+ AP C RTP P
Sbjct: 223 RRGTWGSASRWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 62
Score = 28.1 bits (55), Expect(2) = 7e-027
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 65 RTVQGSAGRRRRTRWR*SWR 124
Score = 18.9 bits (35), Expect(3) = 3e-036
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / -1
Query: 375 LPDGVH 392
LPDGVH
Sbjct: 201 LPDGVH 184
>gb|CA756111.1|CA756111 BR030035000_PLATE_C06_43_040.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030035000_PLATE_C06_43_040.ab1 similar to NP_568160.1|
(NM_120678) putative protein [Arabidopsis thaliana]
gi|21592534|gb|AAM64483.1| (AY086919) unknown
[Arabidopsis thaliana], mRNA sequence
Length = 628
Score = 117 bits (250), Expect(2) = 3e-027
Identities = 49/77 (63%), Positives = 56/77 (72%)
Frame = -2 / +2
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 224 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 403
Query: 263 VGYKCGDYTLP*LMKTS 213
VGYKCGDYTLP* K++
Sbjct: 404 VGYKCGDYTLP*ATKST 454
Score = 103 bits (220), Expect(2) = 2e-034
Identities = 39/49 (79%), Positives = 41/49 (83%)
Frame = +2 / -3
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A CNLRTCSRRGGR CCSAWGW*WRP A*S + W C TA*RR G+WGSA
Sbjct: 434 AECNLRTCSRRGGRRCCSAWGW*WRPRA*SPRSWSCWTA*RRRGTWGSA 288
Score = 102 bits (218), Expect(2) = 2e-039
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -1 / +1
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADED 217
H AEPQ+P+RRHAV+H Q DQA GRH+HPQALQH RPPRRLQVRRLH+A+++++
Sbjct: 280 HREAEPQVPLRRHAVQHDQERGDQARGRHHHPQALQHRRPPRRLQVRRLHSAMSNKE 450
Score = 98.2 bits (208), Expect(2) = 4e-024
Identities = 44/54 (81%), Positives = 47/54 (87%)
Frame = +1 / -2
Query: 217 VFIS*GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
+F++ G V*SPHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 450 LFVAHGRV*SPHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 289
Score = 83.5 bits (176), Expect(2) = 2e-039
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +2
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 137 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 289
Score = 66.1 bits (138), Expect(2) = 2e-034
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -2
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 285 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 136
Score = 36.8 bits (74), Expect(2) = 4e-024
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2 / -3
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR ++RWCA S+ +A T G P AP+ AP C RTP P
Sbjct: 311 RRGTWGSASRWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 150
Score = 28.1 bits (55), Expect(2) = 3e-027
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 153 RTVQGSAGRRRRTRWR*SWR 212
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 101 bits (215), Expect(2) = 1e-022
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -2 / +1
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 10341262 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 10341441
Query: 263 VGYKCG 246
VGYKCG
Sbjct: 10341442 VGYKCG 10341459
Score = 98.7 bits (209), Expect(2) = 5e-033
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2 / -1
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
LRTCSRRGGR CCSAWGW*WRP A*SR+ W C TA*RR G+WGSA
Sbjct: 10341460 LRTCSRRGGRRCCSAWGW*WRPRA*SRRSWSCWTA*RRRGTWGSA 10341326
Score = 95.0 bits (201), Expect(2) = 4e-037
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -1 / +3
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
H AEPQ+P+RRHAV+H Q RDQA GRH+HPQALQH RPPRRLQVRR
Sbjct: 10341318 HREAEPQVPLRRHAVQHDQERRDQARGRHHHPQALQHRRPPRRLQVRR 10341461
Score = 88.6 bits (187), Expect(2) = 8e-032
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG
Sbjct: 10345036 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCG 10345167
Score = 88.6 bits (187), Expect(2) = 2e-021
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = +1 / -3
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
PHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 10341458 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 10341327
Score = 83.5 bits (176), Expect(2) = 4e-037
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 10341175 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 10341327
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 34/53 (64%), Positives = 35/53 (66%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
SSS RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ GS
Sbjct: 10345195 SSSHAIRTYRRTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRGS 10345037
Score = 72.1 bits (151), Expect(2) = 8e-032
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 10344892 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 10345050
Score = 66.1 bits (138), Expect(2) = 5e-033
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -3
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 10341323 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 10341174
Score = 51.9 bits (107), Expect(2) = 3e-022
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -3
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 10345049 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 10344891
Score = 36.8 bits (74), Expect(2) = 2e-021
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2 / -1
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR ++RWCA S+ +A T G P AP+ AP C RTP P
Sbjct: 10341349 RRGTWGSASRWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 10341188
Score = 28.1 bits (55), Expect(2) = 1e-022
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 10341191 RTVQGSAGRRRRTRWR*SWR 10341250
>ref|NT_107198.1| Oryza sativa (japonica cultivar-group)
Length = 632744
Score = 101 bits (215), Expect(2) = 1e-022
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -2 / +1
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 283306 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 283485
Query: 263 VGYKCG 246
VGYKCG
Sbjct: 283486 VGYKCG 283503
Score = 98.7 bits (209), Expect(2) = 5e-033
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2 / -2
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
LRTCSRRGGR CCSAWGW*WRP A*SR+ W C TA*RR G+WGSA
Sbjct: 283504 LRTCSRRGGRRCCSAWGW*WRPRA*SRRSWSCWTA*RRRGTWGSA 283370
Score = 95.0 bits (201), Expect(2) = 4e-037
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -1 / +3
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
H AEPQ+P+RRHAV+H Q RDQA GRH+HPQALQH RPPRRLQVRR
Sbjct: 283362 HREAEPQVPLRRHAVQHDQERRDQARGRHHHPQALQHRRPPRRLQVRR 283505
Score = 88.6 bits (187), Expect(2) = 2e-021
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = +1 / -1
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
PHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 283502 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 283371
Score = 88.6 bits (187), Expect(2) = 8e-032
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG
Sbjct: 287081 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCG 287212
Score = 83.5 bits (176), Expect(2) = 4e-037
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 283219 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 283371
Score = 76.2 bits (160), Expect(2) = 4e-022
Identities = 34/53 (64%), Positives = 35/53 (66%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
SSS RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ GS
Sbjct: 287240 SSSHAIRTYRRTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRGS 287082
Score = 72.1 bits (151), Expect(2) = 8e-032
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 286937 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 287095
Score = 66.1 bits (138), Expect(2) = 5e-033
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -1
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 283367 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 283218
Score = 51.9 bits (107), Expect(2) = 4e-022
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -3
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 287094 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 286936
Score = 36.8 bits (74), Expect(2) = 2e-021
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2 / -2
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR ++RWCA S+ +A T G P AP+ AP C RTP P
Sbjct: 283393 RRGTWGSASRWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 283232
Score = 28.1 bits (55), Expect(2) = 1e-022
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 283235 RTVQGSAGRRRRTRWR*SWR 283294
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
complete sequence
Length = 116952
Score = 101 bits (215), Expect(2) = 1e-022
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -2 / +1
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 63301 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 63480
Query: 263 VGYKCG 246
VGYKCG
Sbjct: 63481 VGYKCG 63498
Score = 98.7 bits (209), Expect(2) = 5e-033
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2 / -3
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
LRTCSRRGGR CCSAWGW*WRP A*SR+ W C TA*RR G+WGSA
Sbjct: 63499 LRTCSRRGGRRCCSAWGW*WRPRA*SRRSWSCWTA*RRRGTWGSA 63365
Score = 95.0 bits (201), Expect(2) = 4e-037
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -1 / +3
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
H AEPQ+P+RRHAV+H Q RDQA GRH+HPQALQH RPPRRLQVRR
Sbjct: 63357 HREAEPQVPLRRHAVQHDQERRDQARGRHHHPQALQHRRPPRRLQVRR 63500
Score = 88.6 bits (187), Expect(2) = 8e-032
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG
Sbjct: 67076 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCG 67207
Score = 88.6 bits (187), Expect(2) = 2e-021
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = +1 / -2
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
PHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 63497 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 63366
Score = 83.5 bits (176), Expect(2) = 4e-037
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 63214 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 63366
Score = 76.2 bits (160), Expect(2) = 4e-022
Identities = 34/53 (64%), Positives = 35/53 (66%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
SSS RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ GS
Sbjct: 67235 SSSHAIRTYRRTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRGS 67077
Score = 72.1 bits (151), Expect(2) = 8e-032
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 66932 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 67090
Score = 66.1 bits (138), Expect(2) = 5e-033
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -2
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 63362 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 63213
Score = 51.9 bits (107), Expect(2) = 4e-022
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -1
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 67089 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 66931
Score = 36.8 bits (74), Expect(2) = 2e-021
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2 / -3
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR ++RWCA S+ +A T G P AP+ AP C RTP P
Sbjct: 63388 RRGTWGSASRWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 63227
Score = 28.1 bits (55), Expect(2) = 1e-022
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 63230 RTVQGSAGRRRRTRWR*SWR 63289
>emb|AL606451.1|OSJN00006 Oryza sativa (japonica cultivar-group) chromosome 4 clone OJ1217_H10,
*** SEQUENCING IN PROGRESS ***
Length = 84487
Score = 101 bits (215), Expect(2) = 1e-022
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -2 / +2
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 83300 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 83479
Query: 263 VGYKCG 246
VGYKCG
Sbjct: 83480 VGYKCG 83497
Score = 98.7 bits (209), Expect(2) = 5e-033
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2 / -3
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
LRTCSRRGGR CCSAWGW*WRP A*SR+ W C TA*RR G+WGSA
Sbjct: 83498 LRTCSRRGGRRCCSAWGW*WRPRA*SRRSWSCWTA*RRRGTWGSA 83364
Score = 95.0 bits (201), Expect(2) = 4e-037
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -1 / +1
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
H AEPQ+P+RRHAV+H Q RDQA GRH+HPQALQH RPPRRLQVRR
Sbjct: 83356 HREAEPQVPLRRHAVQHDQERRDQARGRHHHPQALQHRRPPRRLQVRR 83499
Score = 88.6 bits (187), Expect(2) = 2e-021
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = +1 / -2
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
PHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 83496 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 83365
Score = 83.5 bits (176), Expect(2) = 4e-037
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +2
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 83213 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 83365
Score = 66.1 bits (138), Expect(2) = 5e-033
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -2
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 83361 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 83212
Score = 36.8 bits (74), Expect(2) = 2e-021
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2 / -3
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR ++RWCA S+ +A T G P AP+ AP C RTP P
Sbjct: 83387 RRGTWGSASRWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 83226
Score = 28.1 bits (55), Expect(2) = 1e-022
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 83229 RTVQGSAGRRRRTRWR*SWR 83288
>gb|AACV01009713.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009713, whole
genome shotgun sequence
Length = 19998
Score = 101 bits (215), Expect(2) = 1e-022
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -2 / +2
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D + + C + QSP CLCAVMLS T R AGIKPEVAITIPKRCN+ADRP
Sbjct: 3776 AAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRP 3955
Query: 263 VGYKCG 246
VGYKCG
Sbjct: 3956 VGYKCG 3973
Score = 98.7 bits (209), Expect(2) = 5e-033
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2 / -2
Query: 245 LRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
LRTCSRRGGR CCSAWGW*WRP A*SR+ W C TA*RR G+WGSA
Sbjct: 3974 LRTCSRRGGRRCCSAWGW*WRPRA*SRRSWSCWTA*RRRGTWGSA 3840
Score = 95.0 bits (201), Expect(2) = 4e-037
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = -1 / +1
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRR 244
H AEPQ+P+RRHAV+H Q RDQA GRH+HPQALQH RPPRRLQVRR
Sbjct: 3832 HREAEPQVPLRRHAVQHDQERRDQARGRHHHPQALQHRRPPRRLQVRR 3975
Score = 88.6 bits (187), Expect(2) = 2e-021
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = +1 / -1
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
PHL*PTGRSAMLQRLGMVMATSGLIPA L V DSMTA R LGLC
Sbjct: 3972 PHL*PTGRSAMLQRLGMVMATSGLIPAFLVVLDSMTAQRHLGLC 3841
Score = 88.6 bits (187), Expect(2) = 8e-032
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG
Sbjct: 7550 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCG 7681
Score = 83.5 bits (176), Expect(2) = 4e-037
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +2
Query: 527 VIAGVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
V A A G GECG D++AL++APC SAA DP+STP+S CC+AVHTIG+
Sbjct: 3689 VAAAAADGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK 3841
Score = 76.2 bits (160), Expect(2) = 4e-022
Identities = 34/53 (64%), Positives = 35/53 (66%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
SSS RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ GS
Sbjct: 7709 SSSHAIRTYRRTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRGS 7551
Score = 72.1 bits (151), Expect(2) = 8e-032
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 7406 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 7564
Score = 66.1 bits (138), Expect(2) = 5e-033
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -1
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPAIT 528
PMVCTA Q L GVD GS AA+ HGA SA LS PHSP P A A T
Sbjct: 3837 PMVCTAVQHPLDGVDLGSLAADAHGASFSAILSGGVAPHSPAPSAAAAAT 3688
Score = 51.9 bits (107), Expect(2) = 4e-022
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -1
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 7563 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 7405
Score = 36.8 bits (74), Expect(2) = 2e-021
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2 / -2
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRTPPXHAP 514
RR ++RWCA S+ +A T G P AP+ AP C RTP P
Sbjct: 3863 RRGTWGSASRWCAPPCSTRSTASTWGPWPPTRTAPASAPSCPAASPRTPLHRPP 3702
Score = 28.1 bits (55), Expect(2) = 1e-022
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 511 RMARGSAGEPPPTGWR*GWR 452
R +GSAG T WR* WR
Sbjct: 3705 RTVQGSAGRRRRTRWR*SWR 3764
>dbj|AK062916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H02, full
insert sequence
Length = 590
Score = 155 bits (333), Expect = 3e-036
Identities = 57/93 (61%), Positives = 75/93 (80%)
Frame = -2 / +1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC +A +P++ +CC+ V +IG++P CLCAVMLS TAR+
Sbjct: 154 GAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARS 333
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 228
AG+KP VA+TIPKRC +A+RP+GYKCG YTLP*
Sbjct: 334 AGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP* 432
Score = 112 bits (240), Expect = 2e-023
Identities = 56/92 (60%), Positives = 58/92 (63%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
G V PHL*P GR AM QRLGMVMAT+GL PA AV DSMTAHR LG PM+ T QQL
Sbjct: 428 GRVYGPHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLGFRPMLRTCAQQLG 249
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G A HGA LSAT S PHSP P
Sbjct: 248 GTAARGFCVAAAHGASLSATWSTGTRPHSPAP 153
>dbj|AK105208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H09, full
insert sequence
Length = 702
Score = 155 bits (333), Expect = 3e-036
Identities = 57/93 (61%), Positives = 75/93 (80%)
Frame = -2 / +1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC +A +P++ +CC+ V +IG++P CLCAVMLS TAR+
Sbjct: 154 GAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARS 333
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 228
AG+KP VA+TIPKRC +A+RP+GYKCG YTLP*
Sbjct: 334 AGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP* 432
Score = 112 bits (240), Expect = 2e-023
Identities = 56/92 (60%), Positives = 58/92 (63%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
G V PHL*P GR AM QRLGMVMAT+GL PA AV DSMTAHR LG PM+ T QQL
Sbjct: 428 GRVYGPHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLGFRPMLRTCAQQLG 249
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G A HGA LSAT S PHSP P
Sbjct: 248 GTAARGFCVAAAHGASLSATWSTGTRPHSPAP 153
>ref|XM_472425.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 372
Score = 98.2 bits (208), Expect(2) = 7e-035
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 231
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG YTLP
Sbjct: 211 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLP 357
Score = 82.6 bits (174), Expect(2) = 3e-024
Identities = 35/53 (66%), Positives = 37/53 (69%)
Frame = +2 / -3
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
S + AAC RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ GS
Sbjct: 370 SPAGWAACKRRTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRGS 212
Score = 72.1 bits (151), Expect(2) = 7e-035
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 67 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 225
Score = 51.9 bits (107), Expect(2) = 3e-024
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -2
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 224 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 66
>gb|CV721235.1|CV721235 YBH--03-G09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-G09, mRNA sequence
Length = 454
Score = 98.2 bits (208), Expect(2) = 1e-034
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 231
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG YTLP
Sbjct: 269 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLP 415
Score = 84.9 bits (179), Expect(2) = 1e-024
Identities = 37/61 (60%), Positives = 40/61 (65%)
Frame = +2 / -3
Query: 194 TRTVSLTTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWG 373
TR + S + AAC RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ G
Sbjct: 452 TRPSYVVISPAGWAACKRRTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRG 273
Query: 374 S 376
S
Sbjct: 272 S 270
Score = 72.1 bits (151), Expect(2) = 1e-034
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 125 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 283
Score = 51.9 bits (107), Expect(2) = 1e-024
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -2
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 282 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 124
>gb|CV721634.1|CV721634 YBH--04-M15.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-M15, mRNA sequence
Length = 450
Score = 98.2 bits (208), Expect(2) = 1e-034
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 231
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG YTLP
Sbjct: 281 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLP 427
Score = 82.6 bits (174), Expect(2) = 5e-024
Identities = 35/53 (66%), Positives = 37/53 (69%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
S + AAC RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ GS
Sbjct: 440 SPAGWAACKRRTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRGS 282
Score = 72.1 bits (151), Expect(2) = 1e-034
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 137 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 295
Score = 51.9 bits (107), Expect(2) = 5e-024
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -1
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 294 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 136
>gb|AU182670.1|AU182670 AU182670 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20278, mRNA sequence
Length = 443
Score = 149 bits (319), Expect = 3e-034
Identities = 59/66 (89%), Positives = 62/66 (93%)
Frame = -2 / +2
Query: 416 PTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYT 237
P+SSCCSAVHTIG SPSCLCAVMLS TAR AGIKPEVAITIPKRCNMADRPVGYKCGDYT
Sbjct: 2 PSSSCCSAVHTIGXSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYT 181
Query: 236 LP*LMK 219
LP* ++
Sbjct: 182 LP*PLR 199
Score = 144 bits (310), Expect(2) = 8e-034
Identities = 53/64 (82%), Positives = 56/64 (87%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWG ARWCA
Sbjct: 200 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGXARWCAPP 21
Query: 398 SSSC 409
SSSC
Sbjct: 20 SSSC 9
Score = 131 bits (281), Expect(2) = 1e-029
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQLL
Sbjct: 186 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQLL 7
Query: 412 VG 417
G
Sbjct: 6 DG 1
Score = 127 bits (273), Expect = 6e-028
Identities = 54/66 (81%), Positives = 57/66 (86%)
Frame = -1 / +1
Query: 417 ADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLH 238
A +QLLL AHHRA PQLPVRR AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRRLH
Sbjct: 1 AVEQLLLGGAHHRAXPQLPVRRDAVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRRLH 180
Query: 237 AALADE 220
AAL E
Sbjct: 181 AALTLE 198
Score = 22.1 bits (42), Expect(2) = 8e-034
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3 / -1
Query: 3 FFFFFFLYERNGTYLTY 53
FFFFFF + + L Y
Sbjct: 440 FFFFFFFFFNLSSKLLY 390
Score = 21.2 bits (40), Expect(2) = 1e-029
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / -2
Query: 3 FFFFFFL 23
FFFFFFL
Sbjct: 433 FFFFFFL 413
>gb|AU184419.1|AU184419 AU184419 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2228, mRNA sequence
Length = 454
Score = 148 bits (317), Expect = 5e-034
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = -2 / +1
Query: 410 SSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 231
SSCCSAVHTIGQSPSCLCAVMLS TAR AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP
Sbjct: 1 SSCCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 180
Query: 230 *LMK 219
* ++
Sbjct: 181 *PLR 192
Score = 146 bits (314), Expect = 1e-033
Identities = 54/64 (84%), Positives = 57/64 (89%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQR 397
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA*SR+PW C TA RRTGSWGSARWCA
Sbjct: 193 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRRPWPCWTASRRTGSWGSARWCAPP 14
Query: 398 SSSC 409
SSSC
Sbjct: 13 SSSC 2
Score = 129 bits (276), Expect = 2e-028
Identities = 54/63 (85%), Positives = 56/63 (88%)
Frame = -1 / +3
Query: 408 QLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAAL 229
QLLL AHHRAEPQLPVRR AV+H QG RDQAGGRH+HPQALQHGRPPRRLQVRRLHAAL
Sbjct: 3 QLLLGGAHHRAEPQLPVRRDAVQHGQGRRDQAGGRHHHPQALQHGRPPRRLQVRRLHAAL 182
Query: 228 ADE 220
E
Sbjct: 183 TLE 191
Score = 128 bits (274), Expect = 5e-028
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQL 408
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+TAHRQLGLCPMVCTAEQQL
Sbjct: 179 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITAHRQLGLCPMVCTAEQQL 3
>gb|CV720933.1|CV720933 YBH--02-F09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--02-F09, mRNA sequence
Length = 452
Score = 93.2 bits (197), Expect(2) = 4e-033
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYT 237
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG YT
Sbjct: 311 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYT 451
Score = 78.5 bits (165), Expect(2) = 8e-023
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +2 / -1
Query: 236 ACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
AC RTCSRRGG CSAWGW*W PPA* R +C TA RRTG+ GS
Sbjct: 452 ACKRRTCSRRGGWRVCSAWGW*WPPPA*RRSASQCWTAARRTGTRGS 312
Score = 72.1 bits (151), Expect(2) = 4e-033
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 167 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 325
Score = 51.9 bits (107), Expect(2) = 8e-023
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -3
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 324 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 166
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 144 bits (310), Expect = 5e-033
Identities = 52/87 (59%), Positives = 70/87 (80%)
Frame = -2 / -1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC +A +P++ +CC+ V +IG++P CLCAVMLS TAR+
Sbjct: 36558594 GAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARS 36558415
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCG 246
AG+KP VA+TIPKRC +A+RP+GYKCG
Sbjct: 36558414 AGVKPAVAMTIPKRCAIANRPIGYKCG 36558334
Score = 110 bits (235), Expect = 1e-022
Identities = 54/87 (62%), Positives = 56/87 (64%)
Frame = +1 / +2
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*P GR AM QRLGMVMAT+GL PA AV DSMTAHR LG PM+ T QQL
Sbjct: 36558335 PHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLGFRPMLRTCAQQLGGTAAR 36558514
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXP 507
G A HGA LSAT S PHSP P
Sbjct: 36558515 GFCVAAAHGASLSATWSTGTRPHSPAP 36558595
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 144 bits (310), Expect = 5e-033
Identities = 52/87 (59%), Positives = 70/87 (80%)
Frame = -2 / -1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC +A +P++ +CC+ V +IG++P CLCAVMLS TAR+
Sbjct: 11005977 GAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARS 11005798
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCG 246
AG+KP VA+TIPKRC +A+RP+GYKCG
Sbjct: 11005797 AGVKPAVAMTIPKRCAIANRPIGYKCG 11005717
Score = 110 bits (235), Expect = 1e-022
Identities = 54/87 (62%), Positives = 56/87 (64%)
Frame = +1 / +2
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*P GR AM QRLGMVMAT+GL PA AV DSMTAHR LG PM+ T QQL
Sbjct: 11005718 PHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLGFRPMLRTCAQQLGGTAAR 11005897
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXP 507
G A HGA LSAT S PHSP P
Sbjct: 11005898 GFCVAAAHGASLSATWSTGTRPHSPAP 11005978
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0005H10
Length = 142885
Score = 144 bits (310), Expect = 5e-033
Identities = 52/87 (59%), Positives = 70/87 (80%)
Frame = -2 / -1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC +A +P++ +CC+ V +IG++P CLCAVMLS TAR+
Sbjct: 129763 GAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARS 129584
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCG 246
AG+KP VA+TIPKRC +A+RP+GYKCG
Sbjct: 129583 AGVKPAVAMTIPKRCAIANRPIGYKCG 129503
Score = 110 bits (235), Expect = 1e-022
Identities = 54/87 (62%), Positives = 56/87 (64%)
Frame = +1 / +3
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*P GR AM QRLGMVMAT+GL PA AV DSMTAHR LG PM+ T QQL
Sbjct: 129504 PHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLGFRPMLRTCAQQLGGTAAR 129683
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXP 507
G A HGA LSAT S PHSP P
Sbjct: 129684 GFCVAAAHGASLSATWSTGTRPHSPAP 129764
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 144 bits (310), Expect = 5e-033
Identities = 52/87 (59%), Positives = 70/87 (80%)
Frame = -2 / -1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC +A +P++ +CC+ V +IG++P CLCAVMLS TAR+
Sbjct: 36477924 GAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARS 36477745
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCG 246
AG+KP VA+TIPKRC +A+RP+GYKCG
Sbjct: 36477744 AGVKPAVAMTIPKRCAIANRPIGYKCG 36477664
Score = 110 bits (235), Expect = 1e-022
Identities = 54/87 (62%), Positives = 56/87 (64%)
Frame = +1 / +2
Query: 247 PHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDC 426
PHL*P GR AM QRLGMVMAT+GL PA AV DSMTAHR LG PM+ T QQL
Sbjct: 36477665 PHL*PMGRLAMAQRLGMVMATAGLTPALRAVFDSMTAHRHLGFRPMLRTCAQQLGGTAAR 36477844
Query: 427 GSSAAEMHGAILSATLSAEALPHSPXP 507
G A HGA LSAT S PHSP P
Sbjct: 36477845 GFCVAAAHGASLSATWSTGTRPHSPAP 36477925
>gb|CV721396.1|CV721396 YBH--03-P10.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-P10, mRNA sequence
Length = 453
Score = 88.6 bits (187), Expect(2) = 9e-032
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCG 246
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RPVGYKCG
Sbjct: 277 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCG 408
Score = 75.3 bits (158), Expect(2) = 8e-022
Identities = 31/43 (72%), Positives = 32/43 (74%)
Frame = +2 / -3
Query: 248 RTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGS 376
RTCSRRGG CSAWGW*W PPA* R RC TA RRTG+ GS
Sbjct: 406 RTCSRRGGWRVCSAWGW*WPPPA*RRSASRCWTAARRTGTRGS 278
Score = 72.1 bits (151), Expect(2) = 9e-032
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 133 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 291
Score = 51.9 bits (107), Expect(2) = 8e-022
Identities = 27/53 (50%), Positives = 27/53 (50%)
Frame = +1 / -2
Query: 358 HRQLGLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCAT 516
H L PM TA Q G GS AA HGA SAT SA LPH P CAT
Sbjct: 290 HAWLWCVPMSRTAAQHAAGGRAPGSCAAFAHGASFSATFSAGVLPHLPAACAT 132
>gb|AU183328.1|AU183328 AU183328 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61684, mRNA sequence
Length = 438
Score = 137 bits (294), Expect = 8e-031
Identities = 54/59 (91%), Positives = 54/59 (91%)
Frame = -2 / +2
Query: 404 CCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 228
CCSAVHTIGQSP CLC VMLS TAR AGI PEVAITIPKRCNMADRPVGYKCGDYTLP*
Sbjct: 2 CCSAVHTIGQSPXCLCXVMLSNTARVAGIXPEVAITIPKRCNMADRPVGYKCGDYTLP* 178
Score = 132 bits (283), Expect(2) = 1e-029
Identities = 48/58 (82%), Positives = 50/58 (86%)
Frame = +2 / -2
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSS 403
+AACNLRTCSRRGGRPCCSAWGW*WRPP *SR+PW C TA R TG WGSARWCA SS
Sbjct: 176 KAACNLRTCSRRGGRPCCSAWGW*WRPPX*SRRPWPCWTASRXTGXWGSARWCAPPSS 3
Score = 122 bits (261), Expect(2) = 2e-026
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQ 405
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAV DS+T HRQ GLCPMVCTAEQQ
Sbjct: 174 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPATLAVLDSITXHRQXGLCPMVCTAEQQ 1
Score = 119 bits (254), Expect = 3e-025
Identities = 49/59 (83%), Positives = 51/59 (86%)
Frame = -1 / +1
Query: 405 LLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAAL 229
LLL AHHRAEP LPV R AV+H QG RDQ GGRH+HPQALQHGRPPRRLQVRRLHAAL
Sbjct: 1 LLLGGAHHRAEPXLPVXRDAVQHGQGRRDQXGGRHHHPQALQHGRPPRRLQVRRLHAAL 177
Score = 20.8 bits (39), Expect(2) = 1e-029
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3 / -1
Query: 3 FFFFFFLYERNGTYLTY 53
FFFFFF + +Y
Sbjct: 420 FFFFFFFXGKQAFVYSY 370
Score = 19.4 bits (36), Expect(2) = 2e-026
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / -2
Query: 3 FFFFFF 20
FFFFFF
Sbjct: 416 FFFFFF 399
>gb|C99088.1|C99088 C99088 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4433_1A, mRNA sequence
Length = 249
Score = 98.2 bits (208), Expect(3) = 1e-029
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = -2 / +3
Query: 500 GECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPS 366
GECG SADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQ P+
Sbjct: 12 GECGXXSADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQXPA 146
Score = 81.7 bits (172), Expect(3) = 4e-027
Identities = 33/44 (75%), Positives = 35/44 (79%)
Frame = +1 / -3
Query: 370 GLCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSP 501
G CPMVCTAEQQLL G DCGSSAA+ HGA SAT SA+ PHSP
Sbjct: 142 GXCPMVCTAEQQLLDGADCGSSAADTHGASRSATRSADXXPHSP 11
Score = 44.6 bits (91), Expect(3) = 4e-027
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / -3
Query: 263 RGGRPCCSAWGW*WR 307
RGGR CCSAWGW*WR
Sbjct: 247 RGGRXCCSAWGW*WR 203
Score = 38.6 bits (78), Expect(3) = 1e-029
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2 / +1
Query: 308 VAITIPKRCNMADRPV 261
VAITIPKRCN ADRPV
Sbjct: 202 VAITIPKRCNXADRPV 249
Score = 33.6 bits (67), Expect(3) = 4e-027
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1 / -1
Query: 310 SGLIPAALAVPDSMTAHRQLG 372
SGLIPA LAV +TA RQLG
Sbjct: 201 SGLIPATLAVXXXITAXRQLG 139
Score = 31.8 bits (63), Expect(3) = 1e-029
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -1 / +1
Query: 369 QLPVRRHAVRHRQGCRDQAG 310
QLPVRR H QG RDQ G
Sbjct: 142 QLPVRRDXXXHGQGRRDQXG 201
>gb|AU183333.1|AU183333 AU183333 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61773, mRNA sequence
Length = 439
Score = 93.2 bits (197), Expect(2) = 2e-028
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPW 334
+S +AACNLRTCSRRGGRPCCSAWGW*WRPPA S +PW
Sbjct: 210 ASRVKAACNLRTCSRRGGRPCCSAWGW*WRPPAXSXRPW 94
Score = 79.4 bits (167), Expect(2) = 9e-026
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = -1 / +2
Query: 333 QGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
QG D AGGRH+HPQALQHGRPPRRLQVRRLHAAL E
Sbjct: 95 QGRXDXAGGRHHHPQALQHGRPPRRLQVRRLHAALTLE 208
Score = 73.5 bits (154), Expect(2) = 5e-021
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALA 336
GSV*SPHL*PTGRSAMLQRLGMVMATSG IPA LA
Sbjct: 196 GSV*SPHL*PTGRSAMLQRLGMVMATSGXIPATLA 92
Score = 60.6 bits (126), Expect(2) = 9e-026
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -2 / +2
Query: 413 TSSCCSAVHTIGQSPSCLCAVMLSGTAR 330
+SSCCSAVHTIGQSPSCLC VMLS T +
Sbjct: 14 SSSCCSAVHTIGQSPSCLCPVMLSNTGQ 97
Score = 55.6 bits (115), Expect(2) = 2e-028
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1 / -2
Query: 337 VPDSMTAHRQLGLCPMVCTAEQQLL 411
V DS+T HRQLGLCPMVCTAEQQLL
Sbjct: 90 VLDSITGHRQLGLCPMVCTAEQQLL 16
Score = 50.6 bits (104), Expect(2) = 5e-021
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +2 / -3
Query: 329 PWRCRTA*RRTGSWGSARWCAQRSSSC 409
P C TA R TGSWGSARWCA SSSC
Sbjct: 98 PGPCWTASRGTGSWGSARWCAPPSSSC 18
>gb|CV721865.1|CV721865 YBH--05-J14.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--05-J14, mRNA sequence
Length = 392
Score = 72.1 bits (151), Expect(2) = 6e-027
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLC 357
VAH G+CG+ A++VAL++APC AA DP + P ++CC+AV IG S C
Sbjct: 133 VAHAAGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHAC 291
Score = 71.6 bits (150), Expect(2) = 6e-027
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
QS +CLCAV+LS T R +G+KPEVAITIPKRC +A+RP
Sbjct: 277 QSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRP 390
>gb|AU064186.1|AU064186 AU064186 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4182_1A, mRNA sequence
Length = 319
Score = 110 bits (234), Expect(2) = 1e-024
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -2 / +2
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPS 366
G A G GECGR SADRVALR+APC+SAADDPQS P+SSCCSAVHTIGQSP+
Sbjct: 146 GAAEGAGECGRXSADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPA 298
Score = 25.8 bits (50), Expect(2) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +1
Query: 371 PSCLCAVML 345
PSCLCAVML
Sbjct: 292 PSCLCAVML 318
>gb|CD670686.1|CD670686 OsMR101 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 500
Score = 112 bits (240), Expect = 2e-023
Identities = 43/90 (47%), Positives = 58/90 (64%)
Frame = -2 / +1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC +A +P++ +CC+ V +IG++P CLCA MLS TAR+
Sbjct: 190 GAGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAAMLSNTARS 369
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCGDYT 237
AG+KP VA+TIP P YT
Sbjct: 370 AGVKPAVAMTIPSPAPSPTAPSATNVAPYT 459
>gb|AACV01002674.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002674, whole
genome shotgun sequence
Length = 36918
Score = 111 bits (237), Expect = 6e-023
Identities = 45/87 (51%), Positives = 58/87 (66%)
Frame = -2 / +2
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC + +P + A +P CLCAVMLS TAR+
Sbjct: 22304 GAGECGRVPVDQVALKLAPCAAGHAEPARRGAAQLLRAGAQHRANPKCLCAVMLSNTARS 22483
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCG 246
AG+KP VA+TIPK +A+RP+GYKCG
Sbjct: 22484 AGVKPAVAMTIPKGWAIANRPIGYKCG 22564
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 111 bits (237), Expect = 6e-023
Identities = 45/87 (51%), Positives = 58/87 (66%)
Frame = -2 / -1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC + +P + A +P CLCAVMLS TAR+
Sbjct: 10759987 GAGECGRVPVDQVALKLAPCAAGHAEPARRGAAQLLRAGAQHRANPKCLCAVMLSNTARS 10759808
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCG 246
AG+KP VA+TIPK +A+RP+GYKCG
Sbjct: 10759807 AGVKPAVAMTIPKGWAIANRPIGYKCG 10759727
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 111 bits (237), Expect = 6e-023
Identities = 45/87 (51%), Positives = 58/87 (66%)
Frame = -2 / -1
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G GECGR D+VAL++APC + +P + A +P CLCAVMLS TAR+
Sbjct: 35961708 GAGECGRVPVDQVALKLAPCAAGHAEPARRGAAQLLRAGAQHRANPKCLCAVMLSNTARS 35961529
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCG 246
AG+KP VA+TIPK +A+RP+GYKCG
Sbjct: 35961528 AGVKPAVAMTIPKGWAIANRPIGYKCG 35961448
>gb|D24434.1|D24434 RICR1885A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1885_2A, mRNA sequence
Length = 337
Score = 98.7 bits (209), Expect(2) = 6e-022
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -2 / +1
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPS 366
G A G GECGRASADR ALR+APC+SA DDP S P+SSCCS VHTIG P+
Sbjct: 142 GAAEGAGECGRASADRXALRLAPCVSAXDDPXSAPSSSCCSXVHTIGXXPA 294
Score = 28.1 bits (55), Expect(2) = 6e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 371 PSCLCAVMLSGTARAA 324
PSCL AVMLS TA A
Sbjct: 288 PSCLXAVMLSNTAXVA 335
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,117,757,365
Number of Sequences: 438736
Number of extensions: 79139110
Number of successful extensions: 2224235
Number of sequences better than 1.0e-020: 66
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 107147140806
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)