TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023585.2.1
(635 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB641981.1|CB641981 OSJNEb01O19.r OSJNEb Oryza sativa (j... 205 2e-069
dbj|AB081950.1| Oryza sativa (japonica cultivar-group) OsPN... 214 5e-066
gb|CB671136.1|CB671136 OSJNEe04I24.r OSJNEe Oryza sativa (j... 214 7e-066
gb|CB641950.1|CB641950 OSJNEb01N22.r OSJNEb Oryza sativa (j... 214 7e-066
gb|AU091754.1|AU091754 AU091754 Rice callus Oryza sativa (j... 214 7e-066
dbj|AK111504.1| Oryza sativa (japonica cultivar-group) cDNA... 200 4e-056
dbj|AK111587.1| Oryza sativa (japonica cultivar-group) cDNA... 200 4e-056
dbj|AK111996.1| Oryza sativa (japonica cultivar-group) cDNA... 200 4e-056
ref|XM_473529.1| Oryza sativa (japonica cultivar-group), p... 200 4e-056
gb|CB644930.1|CB644930 OSJNEb06F17.f OSJNEb Oryza sativa (j... 200 4e-056
gb|CB664150.1|CB664150 OSJNEd09L10.r OSJNEd Oryza sativa (j... 200 4e-056
gb|CB670855.1|CB670855 OSJNEe04C12.r OSJNEe Oryza sativa (j... 200 7e-056
dbj|AK111500.1| Oryza sativa (japonica cultivar-group) cDNA... 189 2e-055
dbj|AK111833.1| Oryza sativa (japonica cultivar-group) cDNA... 189 2e-055
gb|CB670123.1|CB670123 OSJNEe03A22.r OSJNEe Oryza sativa (j... 198 5e-055
dbj|AK122176.1| Oryza sativa (japonica cultivar-group) cDNA... 187 8e-055
gb|CA999687.1|CA999687 S234I_A02 Rice cold stress germinati... 214 1e-053
gb|AU030923.1|AU030923 AU030923 Rice cDNA from immature lea... 148 1e-050
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 92 3e-049
dbj|AP004236.3| Oryza sativa (japonica cultivar-group) geno... 92 4e-049
dbj|AP003986.1| Oryza sativa (japonica cultivar-group) chro... 92 4e-049
gb|AACV01014478.1| Oryza sativa (japonica cultivar-group) c... 92 4e-049
gb|CB653344.1|CB653344 OSJNEc04E11.r OSJNEc Oryza sativa (j... 196 2e-048
gb|CB665755.1|CB665755 OSJNEd12F14.r OSJNEd Oryza sativa (j... 196 2e-048
dbj|AK111553.1| Oryza sativa (japonica cultivar-group) cDNA... 196 2e-048
dbj|AK112025.1| Oryza sativa (japonica cultivar-group) cDNA... 196 2e-048
gb|C29031.1|C29031 C29031 Rice callus cDNA Oryza sativa (ja... 194 6e-048
dbj|AK103279.1| Oryza sativa (japonica cultivar-group) cDNA... 194 6e-048
ref|XM_468547.1| Oryza sativa (japonica cultivar-group), mRNA 194 6e-048
ref|XM_469311.1| Oryza sativa (japonica cultivar-group), mRNA 194 8e-048
ref|NM_185035.1| Oryza sativa (japonica cultivar-group), mRNA 180 1e-047
dbj|AB081951.1| Oryza sativa (japonica cultivar-group) OsAG... 192 3e-047
gb|CF312778.1|CF312778 ABF--08-K18.g1 ABF3-overexpressing t... 162 3e-046
gb|AU183854.1|AU183854 AU183854 Rice immature leaf includin... 161 2e-044
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 92 4e-044
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 83 4e-044
dbj|AP004813.1| Oryza sativa (japonica cultivar-group) chro... 83 4e-044
dbj|AP005750.3| Oryza sativa (japonica cultivar-group) geno... 83 4e-044
gb|AACV01014978.1| Oryza sativa (japonica cultivar-group) c... 83 5e-044
dbj|AK100285.1| Oryza sativa (japonica cultivar-group) cDNA... 176 3e-042
ref|XM_476934.1| Oryza sativa (japonica cultivar-group), mRNA 176 3e-042
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 155 6e-040
ref|NT_107184.1| Oryza sativa (japonica cultivar-group) 155 7e-040
gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 ... 155 7e-040
gb|AACV01007049.1| Oryza sativa (japonica cultivar-group) c... 155 7e-040
ref|XM_468898.1| Oryza sativa (japonica cultivar-group), mRNA 155 7e-040
gb|CB667383.1|CB667383 OSJNEd14L01.f OSJNEd Oryza sativa (j... 159 4e-038
gb|AU029884.1|AU029884 AU029884 Rice cDNA from immature lea... 161 7e-038
gb|CF326855.1|CF326855 NACL--01-B17.g1 Rice callus plasmid ... 147 1e-037
ref|XM_469312.1| Oryza sativa (japonica cultivar-group), mRNA 159 2e-037
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 91 4e-037
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 91 4e-037
gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09... 91 5e-037
gb|AACV01007652.1| Oryza sativa (japonica cultivar-group) c... 91 5e-037
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 155 4e-036
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 155 4e-036
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 155 4e-036
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 86 5e-036
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 86 6e-036
gb|AACV01005685.1| Oryza sativa (japonica cultivar-group) c... 86 6e-036
dbj|AK060277.1| Oryza sativa (japonica cultivar-group) cDNA... 92 1e-035
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 79 1e-035
dbj|AP004188.3| Oryza sativa (japonica cultivar-group) geno... 79 1e-035
gb|AACV01005121.1| Oryza sativa (japonica cultivar-group) c... 79 1e-035
ref|XM_469924.1| Oryza sativa (japonica cultivar-group), mRNA 150 1e-034
dbj|AG023794.1| Oryza sativa (japonica cultivar-group) DNA,... 83 3e-034
dbj|AG207806.1| Oryza sativa (japonica cultivar-group) DNA,... 83 7e-034
dbj|AG209441.1| Oryza sativa (japonica cultivar-group) DNA,... 83 2e-033
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 116 3e-033
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 83 3e-033
dbj|AG208868.1| Oryza sativa (japonica cultivar-group) DNA,... 83 3e-033
emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromoso... 83 3e-033
gb|AACV01010310.1| Oryza sativa (japonica cultivar-group) c... 83 4e-033
dbj|AK069685.1| Oryza sativa (japonica cultivar-group) cDNA... 126 4e-033
gb|CF312777.1|CF312777 ABF--08-K18.b1 ABF3-overexpressing t... 139 3e-031
gb|AU101021.1|AU101021 AU101021 Rice callus Oryza sativa (j... 70 9e-031
gb|AACV01008101.1| Oryza sativa (japonica cultivar-group) c... 77 4e-029
gb|AU030917.1|AU030917 AU030917 Rice cDNA from immature lea... 70 2e-028
gb|CB671414.1|CB671414 OSJNEe04P24.r OSJNEe Oryza sativa (j... 128 6e-028
dbj|AK106247.1| Oryza sativa (japonica cultivar-group) cDNA... 128 6e-028
ref|XM_464271.1| Oryza sativa (japonica cultivar-group), mRNA 128 6e-028
ref|XM_478040.1| Oryza sativa (japonica cultivar-group), mRNA 96 2e-027
gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 ... 77 2e-027
gb|AACV01010482.1| Oryza sativa (japonica cultivar-group) c... 116 2e-024
ref|XM_473887.1| Oryza sativa (japonica cultivar-group), p... 116 2e-024
ref|NT_107200.1| Oryza sativa (japonica cultivar-group) 116 2e-024
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 116 2e-024
emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromoso... 116 2e-024
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 116 2e-024
gb|AACV01015319.1| Oryza sativa (japonica cultivar-group) c... 69 2e-024
dbj|AK107521.1| Oryza sativa (japonica cultivar-group) cDNA... 114 8e-024
ref|XM_473888.1| Oryza sativa (japonica cultivar-group), p... 114 8e-024
dbj|AK120766.1| Oryza sativa (japonica cultivar-group) cDNA... 114 1e-023
gb|AU225409.1|AU225409 AU225409 Oryza sativa Koshihikari pi... 112 3e-023
dbj|AP005179.4| Oryza sativa (japonica cultivar-group) geno... 69 7e-023
dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA... 105 1e-022
dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA... 105 1e-022
dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA... 105 1e-022
dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA... 105 1e-022
dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA... 105 1e-022
gb|CB663613.1|CB663613 OSJNEd08M21.r OSJNEd Oryza sativa (j... 105 1e-022
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 77 1e-022
dbj|AP005877.3| Oryza sativa (japonica cultivar-group) geno... 69 5e-022
>gb|CB641981.1|CB641981 OSJNEb01O19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01O19 3', mRNA sequence
Length = 804
Score = 205 bits (442), Expect(4) = 2e-069
Identities = 81/87 (93%), Positives = 83/87 (95%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFD YLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNL YTYARCTRSVSVVPPAY
Sbjct: 569 EFDLYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLWYTYARCTRSVSVVPPAY 390
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSN 261
YAHLAAFRARFYMEPEMSENQT+ S+
Sbjct: 389 YAHLAAFRARFYMEPEMSENQTTSKSS 309
Score = 148 bits (318), Expect(2) = 3e-041
Identities = 60/81 (74%), Positives = 65/81 (80%)
Frame = +3 / -1
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V*F+PL* CWN GNK*A SLP PLG*EQFH RRNA+ DKQPL+HLC VHTL FCC +CIL
Sbjct: 567 V*FIPL*PCWNSGNK*ASSLPRPLG*EQFHCRRNADIDKQPLVHLCTVHTLCFCCSTCIL 388
Query: 183 RTPGSIPGAVLHGTRDVGEPD 245
G + AVLHG RDVGEPD
Sbjct: 387 CASGCVSSAVLHGARDVGEPD 325
Score = 142 bits (304), Expect(2) = 5e-046
Identities = 68/81 (83%), Positives = 69/81 (85%)
Frame = -1 / +1
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRT 66
VWFSDISGSM RCA*YAGGTTETERVHRA*V QRLFV+VCISSAVKLFSSQRT
Sbjct: 325 VWFSDISGSM*NRARNAARCA*YAGGTTETERVHRA*VYQRLFVNVCISSAVKLFSSQRT 504
Query: 65 W**AGLLVPWIPA*LQR*KSN 3
W**AGLLVP IPA LQR KSN
Sbjct: 505 W**AGLLVP*IPAWLQRYKSN 567
Score = 127 bits (273), Expect(3) = 1e-042
Identities = 53/75 (70%), Positives = 56/75 (74%)
Frame = -2 / +2
Query: 226 LVPCRTAPGMLPGVRSMQEGQQKPSVCTGHKCSKGCLSVFAFRLL*NCSHPRGHGSERAY 47
L PCRTA P SMQ QQK SVCT HKC+KGCLS+ AFRL *NCSHP+G GSE AY
Sbjct: 344 LAPCRTALETQPDAHSMQVEQQKQSVCTVHKCTKGCLSMSAFRLQ*NCSHPKGRGSELAY 523
Query: 46 LFPGFQHDYRGRNQT 2
LFP FQH YRG NQT
Sbjct: 524 LFPEFQHGYRGINQT 568
Score = 119 bits (255), Expect(2) = 4e-028
Identities = 54/75 (72%), Positives = 56/75 (74%)
Frame = +2 / -3
Query: 2 SLISTSVVMLESREQVGPLTTMSSGMRTISQQTKCKH*QTTFATLMPGAHARFLLSLLHT 181
SLI TSV MLE REQVG LTT S GMRTIS QTKC+H*QTTF TLM GAHA FLL LHT
Sbjct: 568 SLIYTSVAMLEFREQVGQLTTTSFGMRTISLQTKCRH*QTTFGTLMHGAHALFLLFHLHT 389
Query: 182 THTWQHSGRGSTWNQ 226
W RGSTW+Q
Sbjct: 388 MRIWLRFERGSTWSQ 344
Score = 66.6 bits (139), Expect(2) = 5e-046
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / +1
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 232 QQ*NITLFTFSFTAGNGFTEVPFVPMELFDV 324
Score = 64.3 bits (134), Expect(4) = 2e-069
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / -2
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 323 TSKSSIGTNGTSVKPLPAVKEKVKRVMFYC* 231
Score = 58.3 bits (121), Expect(3) = 1e-042
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / +3
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 228 SSTVEHHPLHLLLHRRQWLHRGSVRPNGALRR 323
Score = 44.1 bits (90), Expect(2) = 3e-041
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / -3
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 313 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 227
Score = 29.5 bits (58), Expect(4) = 2e-069
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 479 CKILGNACIIVLVGSDACIQCSSVL 553
CK+L NACIIV+V +C+ L
Sbjct: 88 CKVLSNACIIVVVSV*KKEKCTQCL 14
Score = 29.5 bits (58), Expect(3) = 1e-042
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 321 RRLVLRHLWLH 353
Score = 29.0 bits (57), Expect(2) = 4e-028
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3 / -1
Query: 243 DVEELQWHERRLXXXXXXXXXXXXXXDVLLL 335
DVEEL W ER L DVLLL
Sbjct: 324 DVEELHWDERNLGEAIACGEGEGEEGDVLLL 232
Score = 24.9 bits (48), Expect(4) = 2e-069
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / -3
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 229 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 104
>dbj|AB081950.1| Oryza sativa (japonica cultivar-group) OsPNH1 mRNA for ZLL/PNH
homologous protein, complete cds
Length = 3548
Score = 214 bits (461), Expect(4) = 5e-066
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY
Sbjct: 2922 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 3101
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 3102 YAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 3197
Score = 150 bits (323), Expect(2) = 2e-048
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3 / +2
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V*FLPL* CWN GNK*A SLP PLG*EQFH RRNA+ DKQPLLHLC VHTL FCC +CIL
Sbjct: 2924 V*FLPL*PCWNSGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHLCTVHTLCFCCSTCIL 3103
Query: 183 RTPGSIPGAVLHGTRDVGEPD 245
G + AVLHG RDVGEPD
Sbjct: 3104 CASGCVSSAVLHGARDVGEPD 3166
Score = 146 bits (314), Expect(2) = 3e-047
Identities = 70/81 (86%), Positives = 71/81 (87%)
Frame = -1 / -2
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRT 66
VWFSDISGSM RCA*YAGGTTETERVHRA*V*QRLFV+VCISSAVKLFSSQRT
Sbjct: 3166 VWFSDISGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAVKLFSSQRT 2987
Query: 65 W**AGLLVPWIPA*LQR*KSN 3
W**AGLLVP IPA LQR*KSN
Sbjct: 2986 W**AGLLVP*IPAWLQR*KSN 2924
Score = 133 bits (284), Expect(3) = 3e-044
Identities = 55/75 (73%), Positives = 57/75 (76%)
Frame = -2 / -3
Query: 226 LVPCRTAPGMLPGVRSMQEGQQKPSVCTGHKCSKGCLSVFAFRLL*NCSHPRGHGSERAY 47
L PCRTA P SMQ QQK SVCT HKCSKGCLS+ AFRL *NCSHP+G GSE AY
Sbjct: 3147 LAPCRTALETQPDAHSMQVEQQKQSVCTVHKCSKGCLSMSAFRLQ*NCSHPKGRGSELAY 2968
Query: 46 LFPGFQHDYRGRNQT 2
LFP FQH YRGRNQT
Sbjct: 2967 LFPEFQHGYRGRNQT 2923
Score = 124 bits (265), Expect(2) = 2e-029
Identities = 56/75 (74%), Positives = 58/75 (77%)
Frame = +2 / +1
Query: 2 SLISTSVVMLESREQVGPLTTMSSGMRTISQQTKCKH*QTTFATLMPGAHARFLLSLLHT 181
SLISTSV MLE REQVG LTT S GMRTIS QTKC+H*QTTFATLM GAHA FLL LHT
Sbjct: 2923 SLISTSVAMLEFREQVGQLTTTSFGMRTISLQTKCRH*QTTFATLMHGAHALFLLFHLHT 3102
Query: 182 THTWQHSGRGSTWNQ 226
W RGSTW+Q
Sbjct: 3103 MRIWLRFERGSTWSQ 3147
Score = 66.1 bits (138), Expect(2) = 3e-047
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 3259 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 3167
Score = 65.7 bits (137), Expect(2) = 2e-048
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 3168 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 3260
Score = 58.8 bits (122), Expect(3) = 3e-044
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -1
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 3263 SSTVEHHPLHLLLHRRQWLHRGSVRPSGALRR 3168
Score = 44.1 bits (90), Expect(4) = 5e-066
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +1
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 3178 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 3264
Score = 29.5 bits (58), Expect(3) = 3e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 3170 RRLVLRHLWLH 3138
Score = 29.0 bits (57), Expect(4) = 5e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +1
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 3403 CKVLSNACIIVVV 3441
Score = 29.0 bits (57), Expect(2) = 2e-029
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3 / +2
Query: 243 DVEELQWHERRLXXXXXXXXXXXXXXDVLLL 335
DVEEL W ER L DVLLL
Sbjct: 3167 DVEELHWDERNLGEAIACGEGEGEEGDVLLL 3259
Score = 25.4 bits (49), Expect(4) = 5e-066
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / +1
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 3262 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSXASIWILSD 3387
>gb|CB671136.1|CB671136 OSJNEe04I24.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04I24 3', mRNA sequence
Length = 827
Score = 214 bits (461), Expect(4) = 7e-066
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY
Sbjct: 562 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 383
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 382 YAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 287
Score = 150 bits (323), Expect(2) = 2e-048
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3 / -1
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V*FLPL* CWN GNK*A SLP PLG*EQFH RRNA+ DKQPLLHLC VHTL FCC +CIL
Sbjct: 560 V*FLPL*PCWNSGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHLCTVHTLCFCCSTCIL 381
Query: 183 RTPGSIPGAVLHGTRDVGEPD 245
G + AVLHG RDVGEPD
Sbjct: 380 CASGCVSSAVLHGARDVGEPD 318
Score = 146 bits (314), Expect(2) = 3e-047
Identities = 70/81 (86%), Positives = 71/81 (87%)
Frame = -1 / +3
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRT 66
VWFSDISGSM RCA*YAGGTTETERVHRA*V*QRLFV+VCISSAVKLFSSQRT
Sbjct: 318 VWFSDISGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAVKLFSSQRT 497
Query: 65 W**AGLLVPWIPA*LQR*KSN 3
W**AGLLVP IPA LQR*KSN
Sbjct: 498 W**AGLLVP*IPAWLQR*KSN 560
Score = 133 bits (284), Expect(3) = 3e-044
Identities = 55/75 (73%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 226 LVPCRTAPGMLPGVRSMQEGQQKPSVCTGHKCSKGCLSVFAFRLL*NCSHPRGHGSERAY 47
L PCRTA P SMQ QQK SVCT HKCSKGCLS+ AFRL *NCSHP+G GSE AY
Sbjct: 337 LAPCRTALETQPDAHSMQVEQQKQSVCTVHKCSKGCLSMSAFRLQ*NCSHPKGRGSELAY 516
Query: 46 LFPGFQHDYRGRNQT 2
LFP FQH YRGRNQT
Sbjct: 517 LFPEFQHGYRGRNQT 561
Score = 124 bits (265), Expect(2) = 2e-029
Identities = 56/75 (74%), Positives = 58/75 (77%)
Frame = +2 / -3
Query: 2 SLISTSVVMLESREQVGPLTTMSSGMRTISQQTKCKH*QTTFATLMPGAHARFLLSLLHT 181
SLISTSV MLE REQVG LTT S GMRTIS QTKC+H*QTTFATLM GAHA FLL LHT
Sbjct: 561 SLISTSVAMLEFREQVGQLTTTSFGMRTISLQTKCRH*QTTFATLMHGAHALFLLFHLHT 382
Query: 182 THTWQHSGRGSTWNQ 226
W RGSTW+Q
Sbjct: 381 MRIWLRFERGSTWSQ 337
Score = 66.1 bits (138), Expect(2) = 3e-047
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / +3
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 225 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 317
Score = 65.7 bits (137), Expect(2) = 2e-048
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / -2
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 316 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 224
Score = 58.8 bits (122), Expect(3) = 3e-044
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / +2
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 221 SSTVEHHPLHLLLHRRQWLHRGSVRPSGALRR 316
Score = 44.1 bits (90), Expect(4) = 7e-066
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / -3
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 306 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 220
Score = 29.5 bits (58), Expect(3) = 3e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 314 RRLVLRHLWLH 346
Score = 29.0 bits (57), Expect(4) = 7e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / -3
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 81 CKVLSNACIIVVV 43
Score = 29.0 bits (57), Expect(2) = 2e-029
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3 / -1
Query: 243 DVEELQWHERRLXXXXXXXXXXXXXXDVLLL 335
DVEEL W ER L DVLLL
Sbjct: 317 DVEELHWDERNLGEAIACGEGEGEEGDVLLL 225
Score = 24.9 bits (48), Expect(4) = 7e-066
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / -3
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 222 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 97
>gb|CB641950.1|CB641950 OSJNEb01N22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01N22 3', mRNA sequence
Length = 813
Score = 214 bits (461), Expect(4) = 7e-066
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY
Sbjct: 619 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 440
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 439 YAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 344
Score = 150 bits (323), Expect(2) = 2e-048
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3 / -2
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V*FLPL* CWN GNK*A SLP PLG*EQFH RRNA+ DKQPLLHLC VHTL FCC +CIL
Sbjct: 617 V*FLPL*PCWNSGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHLCTVHTLCFCCSTCIL 438
Query: 183 RTPGSIPGAVLHGTRDVGEPD 245
G + AVLHG RDVGEPD
Sbjct: 437 CASGCVSSAVLHGARDVGEPD 375
Score = 146 bits (314), Expect(2) = 3e-047
Identities = 70/81 (86%), Positives = 71/81 (87%)
Frame = -1 / +3
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRT 66
VWFSDISGSM RCA*YAGGTTETERVHRA*V*QRLFV+VCISSAVKLFSSQRT
Sbjct: 375 VWFSDISGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAVKLFSSQRT 554
Query: 65 W**AGLLVPWIPA*LQR*KSN 3
W**AGLLVP IPA LQR*KSN
Sbjct: 555 W**AGLLVP*IPAWLQR*KSN 617
Score = 133 bits (284), Expect(3) = 3e-044
Identities = 55/75 (73%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 226 LVPCRTAPGMLPGVRSMQEGQQKPSVCTGHKCSKGCLSVFAFRLL*NCSHPRGHGSERAY 47
L PCRTA P SMQ QQK SVCT HKCSKGCLS+ AFRL *NCSHP+G GSE AY
Sbjct: 394 LAPCRTALETQPDAHSMQVEQQKQSVCTVHKCSKGCLSMSAFRLQ*NCSHPKGRGSELAY 573
Query: 46 LFPGFQHDYRGRNQT 2
LFP FQH YRGRNQT
Sbjct: 574 LFPEFQHGYRGRNQT 618
Score = 124 bits (265), Expect(2) = 2e-029
Identities = 56/75 (74%), Positives = 58/75 (77%)
Frame = +2 / -1
Query: 2 SLISTSVVMLESREQVGPLTTMSSGMRTISQQTKCKH*QTTFATLMPGAHARFLLSLLHT 181
SLISTSV MLE REQVG LTT S GMRTIS QTKC+H*QTTFATLM GAHA FLL LHT
Sbjct: 618 SLISTSVAMLEFREQVGQLTTTSFGMRTISLQTKCRH*QTTFATLMHGAHALFLLFHLHT 439
Query: 182 THTWQHSGRGSTWNQ 226
W RGSTW+Q
Sbjct: 438 MRIWLRFERGSTWSQ 394
Score = 66.1 bits (138), Expect(2) = 3e-047
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / +3
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 282 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 374
Score = 65.7 bits (137), Expect(2) = 2e-048
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / -3
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 373 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 281
Score = 58.8 bits (122), Expect(3) = 3e-044
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / +2
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 278 SSTVEHHPLHLLLHRRQWLHRGSVRPSGALRR 373
Score = 44.1 bits (90), Expect(4) = 7e-066
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / -1
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 363 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 277
Score = 29.5 bits (58), Expect(3) = 3e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 371 RRLVLRHLWLH 403
Score = 29.0 bits (57), Expect(4) = 7e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 138 CKVLSNACIIVVV 100
Score = 29.0 bits (57), Expect(2) = 2e-029
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3 / -2
Query: 243 DVEELQWHERRLXXXXXXXXXXXXXXDVLLL 335
DVEEL W ER L DVLLL
Sbjct: 374 DVEELHWDERNLGEAIACGEGEGEEGDVLLL 282
Score = 24.9 bits (48), Expect(4) = 7e-066
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / -1
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 279 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 154
>gb|AU091754.1|AU091754 AU091754 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12560, mRNA sequence
Length = 714
Score = 214 bits (461), Expect(4) = 7e-066
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY
Sbjct: 136 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 315
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 316 YAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 411
Score = 150 bits (323), Expect(2) = 2e-048
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3 / +3
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V*FLPL* CWN GNK*A SLP PLG*EQFH RRNA+ DKQPLLHLC VHTL FCC +CIL
Sbjct: 138 V*FLPL*PCWNSGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHLCTVHTLCFCCSTCIL 317
Query: 183 RTPGSIPGAVLHGTRDVGEPD 245
G + AVLHG RDVGEPD
Sbjct: 318 CASGCVSSAVLHGARDVGEPD 380
Score = 146 bits (314), Expect(2) = 3e-047
Identities = 70/81 (86%), Positives = 71/81 (87%)
Frame = -1 / -2
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRT 66
VWFSDISGSM RCA*YAGGTTETERVHRA*V*QRLFV+VCISSAVKLFSSQRT
Sbjct: 380 VWFSDISGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAVKLFSSQRT 201
Query: 65 W**AGLLVPWIPA*LQR*KSN 3
W**AGLLVP IPA LQR*KSN
Sbjct: 200 W**AGLLVP*IPAWLQR*KSN 138
Score = 133 bits (284), Expect(3) = 3e-044
Identities = 55/75 (73%), Positives = 57/75 (76%)
Frame = -2 / -3
Query: 226 LVPCRTAPGMLPGVRSMQEGQQKPSVCTGHKCSKGCLSVFAFRLL*NCSHPRGHGSERAY 47
L PCRTA P SMQ QQK SVCT HKCSKGCLS+ AFRL *NCSHP+G GSE AY
Sbjct: 361 LAPCRTALETQPDAHSMQVEQQKQSVCTVHKCSKGCLSMSAFRLQ*NCSHPKGRGSELAY 182
Query: 46 LFPGFQHDYRGRNQT 2
LFP FQH YRGRNQT
Sbjct: 181 LFPEFQHGYRGRNQT 137
Score = 124 bits (265), Expect(2) = 2e-029
Identities = 56/75 (74%), Positives = 58/75 (77%)
Frame = +2 / +2
Query: 2 SLISTSVVMLESREQVGPLTTMSSGMRTISQQTKCKH*QTTFATLMPGAHARFLLSLLHT 181
SLISTSV MLE REQVG LTT S GMRTIS QTKC+H*QTTFATLM GAHA FLL LHT
Sbjct: 137 SLISTSVAMLEFREQVGQLTTTSFGMRTISLQTKCRH*QTTFATLMHGAHALFLLFHLHT 316
Query: 182 THTWQHSGRGSTWNQ 226
W RGSTW+Q
Sbjct: 317 MRIWLRFERGSTWSQ 361
Score = 66.1 bits (138), Expect(2) = 3e-047
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 473 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 381
Score = 65.7 bits (137), Expect(2) = 2e-048
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 382 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 474
Score = 58.8 bits (122), Expect(3) = 3e-044
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -1
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 477 SSTVEHHPLHLLLHRRQWLHRGSVRPSGALRR 382
Score = 44.1 bits (90), Expect(4) = 7e-066
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 392 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 478
Score = 29.5 bits (58), Expect(3) = 3e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 384 RRLVLRHLWLH 352
Score = 29.0 bits (57), Expect(4) = 7e-066
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 617 CKVLSNACIIVVV 655
Score = 29.0 bits (57), Expect(2) = 2e-029
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3 / +3
Query: 243 DVEELQWHERRLXXXXXXXXXXXXXXDVLLL 335
DVEEL W ER L DVLLL
Sbjct: 381 DVEELHWDERNLGEAIACGEGEGEEGDVLLL 473
Score = 24.9 bits (48), Expect(4) = 7e-066
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / +2
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 476 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 601
>dbj|AK111504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B21, full
insert sequence
Length = 3746
Score = 200 bits (432), Expect(2) = 4e-056
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 3152 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 3331
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE S++ + S T+ GL
Sbjct: 3332 YAHLAAFRARFYMEPETSDSGSMASGAATSRGL 3430
Score = 96.4 bits (204), Expect(2) = 7e-022
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 3387 SDVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 3208
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 3207 AGRLVPCMPAWLHR*KSN 3154
Score = 41.8 bits (85), Expect(2) = 4e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3473 VRPLPALKENVKRVMFYC* 3529
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AGRG T
Sbjct: 3525 Q*NMTRFTFSLRAGRGLT 3472
>dbj|AK111587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C01, full
insert sequence
Length = 3746
Score = 200 bits (432), Expect(2) = 4e-056
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 3067 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 3246
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE S++ + S T+ GL
Sbjct: 3247 YAHLAAFRARFYMEPETSDSGSMASGAATSRGL 3345
Score = 96.4 bits (204), Expect(2) = 7e-022
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 3302 SDVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 3123
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 3122 AGRLVPCMPAWLHR*KSN 3069
Score = 41.8 bits (85), Expect(2) = 4e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3388 VRPLPALKENVKRVMFYC* 3444
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AGRG T
Sbjct: 3440 Q*NMTRFTFSLRAGRGLT 3387
>dbj|AK111996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-A12, full
insert sequence
Length = 3641
Score = 200 bits (432), Expect(2) = 4e-056
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2969 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 3148
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE S++ + S T+ GL
Sbjct: 3149 YAHLAAFRARFYMEPETSDSGSMASGAATSRGL 3247
Score = 96.4 bits (204), Expect(2) = 7e-022
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 3204 SDVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 3025
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 3024 AGRLVPCMPAWLHR*KSN 2971
Score = 41.8 bits (85), Expect(2) = 4e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3290 VRPLPALKENVKRVMFYC* 3346
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AGRG T
Sbjct: 3342 Q*NMTRFTFSLRAGRGLT 3289
>ref|XM_473529.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3306
Score = 200 bits (432), Expect(2) = 4e-056
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2929 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 3108
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE S++ + S T+ GL
Sbjct: 3109 YAHLAAFRARFYMEPETSDSGSMASGAATSRGL 3207
Score = 96.4 bits (204), Expect(2) = 7e-022
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 3164 SDVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 2985
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 2984 AGRLVPCMPAWLHR*KSN 2931
Score = 41.8 bits (85), Expect(2) = 4e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 3250 VRPLPALKENVKRVMFYC* 3306
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AGRG T
Sbjct: 3302 Q*NMTRFTFSLRAGRGLT 3249
>gb|CB644930.1|CB644930 OSJNEb06F17.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06F17 5', mRNA sequence
Length = 788
Score = 200 bits (432), Expect(2) = 4e-056
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 644 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 465
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE S++ + S T+ GL
Sbjct: 464 YAHLAAFRARFYMEPETSDSGSMASGAATSRGL 366
Score = 96.4 bits (204), Expect(2) = 7e-022
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 409 SDVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 588
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 589 AGRLVPCMPAWLHR*KSN 642
Score = 41.8 bits (85), Expect(2) = 4e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 323 VRPLPALKENVKRVMFYC* 267
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AGRG T
Sbjct: 271 Q*NMTRFTFSLRAGRGLT 324
>gb|CB664150.1|CB664150 OSJNEd09L10.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09L10 3', mRNA sequence
Length = 771
Score = 200 bits (432), Expect(2) = 4e-056
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 653 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 474
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE S++ + S T+ GL
Sbjct: 473 YAHLAAFRARFYMEPETSDSGSMASGAATSRGL 375
Score = 96.4 bits (204), Expect(2) = 7e-022
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM R A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 418 SDVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 597
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 598 AGRLVPCMPAWLHR*KSN 651
Score = 41.8 bits (85), Expect(2) = 4e-056
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 332 VRPLPALKENVKRVMFYC* 276
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AGRG T
Sbjct: 280 Q*NMTRFTFSLRAGRGLT 333
>gb|CB670855.1|CB670855 OSJNEe04C12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C12 3', mRNA sequence
Length = 701
Score = 200 bits (432), Expect(2) = 7e-056
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 640 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 461
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE S++ + S T+ GL
Sbjct: 460 YAHLAAFRARFYMEPETSDSGSMASGAATSRGL 362
Score = 96.4 bits (204), Expect(2) = 7e-022
Identities = 51/78 (65%), Positives = 56/78 (71%)
Frame = -1 / +3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
SD+SGSM + A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 405 SDVSGSM*KRARKAAK*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 584
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 585 AGRLVPCMPAWLHR*KSN 638
Score = 40.9 bits (83), Expect(2) = 7e-056
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA KE VKRVMFYC*
Sbjct: 319 VRPLPAFKENVKRVMFYC* 263
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AGRG T
Sbjct: 267 Q*NMTRFTFSLKAGRGLT 320
>dbj|AK111500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K24, full
insert sequence
Length = 3638
Score = 189 bits (407), Expect(2) = 2e-055
Identities = 72/88 (81%), Positives = 80/88 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDF+LCSHAGI+GTSRPAHYHVLWDENNFTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2968 EFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAY 3147
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNG 264
YAHLAAFRARFYME + S++ + S G
Sbjct: 3148 YAHLAAFRARFYMESDSSDSGSMASGRG 3231
Score = 98.2 bits (208), Expect(2) = 2e-023
Identities = 51/78 (65%), Positives = 57/78 (73%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++S SM R A*YAGGT +T+RVH A*V*QRL V VC +SAVKLFSS RTW**
Sbjct: 3203 SELSDSM*KRALNAAR*A*YAGGTIDTDRVHLA*V*QRLLVRVCNASAVKLFSSHRTW** 3024
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA L + KSN
Sbjct: 3023 AGRLVPLIPAWLHKKKSN 2970
Score = 51.0 bits (105), Expect(2) = 2e-055
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +1
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 3238 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 3336
Score = 34.5 bits (69), Expect(2) = 2e-023
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1 / -1
Query: 332 Q*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
Q*N+T T S +AGRG T PP L DV
Sbjct: 3332 Q*NMTFLTLSLSAGRGLTAPPPAARVLRDV 3243
>dbj|AK111833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K18, full
insert sequence
Length = 1312
Score = 189 bits (407), Expect(2) = 2e-055
Identities = 72/88 (81%), Positives = 80/88 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDF+LCSHAGI+GTSRPAHYHVLWDENNFTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 654 EFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAY 833
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNG 264
YAHLAAFRARFYME + S++ + S G
Sbjct: 834 YAHLAAFRARFYMESDSSDSGSMASGRG 917
Score = 98.2 bits (208), Expect(2) = 2e-023
Identities = 51/78 (65%), Positives = 57/78 (73%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++S SM R A*YAGGT +T+RVH A*V*QRL V VC +SAVKLFSS RTW**
Sbjct: 889 SELSDSM*KRALNAAR*A*YAGGTIDTDRVHLA*V*QRLLVRVCNASAVKLFSSHRTW** 710
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA L + KSN
Sbjct: 709 AGRLVPLIPAWLHKKKSN 656
Score = 51.0 bits (105), Expect(2) = 2e-055
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +3
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 924 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 1022
Score = 34.5 bits (69), Expect(2) = 2e-023
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1 / -1
Query: 332 Q*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
Q*N+T T S +AGRG T PP L DV
Sbjct: 1018 Q*NMTFLTLSLSAGRGLTAPPPAARVLRDV 929
>gb|CB670123.1|CB670123 OSJNEe03A22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03A22 3', mRNA sequence
Length = 744
Score = 198 bits (426), Expect(2) = 5e-055
Identities = 77/93 (82%), Positives = 83/93 (89%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 624 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAY 445
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEPE ++ + S T+ GL
Sbjct: 444 YAHLAAFRARFYMEPETFDSGSMASGAATSRGL 346
Score = 94.1 bits (199), Expect(2) = 9e-021
Identities = 51/78 (65%), Positives = 56/78 (71%)
Frame = -1 / +2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM R A*YAGGT +TERVH A V* +LFV VC SSAV LFSS RT **
Sbjct: 389 SNVSGSM*KRARKAAR*A*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHRT*** 568
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP +PA L R*KSN
Sbjct: 569 AGRLVPCMPAWLHR*KSN 622
Score = 40.9 bits (83), Expect(2) = 5e-055
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA KE VKRVMFYC*
Sbjct: 303 VRPLPAFKENVKRVMFYC* 247
Score = 29.9 bits (59), Expect(2) = 9e-021
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T FTFS AG+G T
Sbjct: 251 Q*NMTRFTFSLKAGKGLT 304
>dbj|AK122176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L17, full
insert sequence
Length = 3644
Score = 187 bits (402), Expect(2) = 8e-055
Identities = 71/88 (80%), Positives = 79/88 (89%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDF+LCSHAGI+GTS PAHYHVLWDENNFTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2987 EFDFFLCSHAGIKGTSHPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAY 3166
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNG 264
YAHLAAFRARFYME + S++ + S G
Sbjct: 3167 YAHLAAFRARFYMESDSSDSGSMASGRG 3250
Score = 98.2 bits (208), Expect(2) = 2e-023
Identities = 51/78 (65%), Positives = 57/78 (73%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++S SM R A*YAGGT +T+RVH A*V*QRL V VC +SAVKLFSS RTW**
Sbjct: 3222 SELSDSM*KRALNAAR*A*YAGGTIDTDRVHLA*V*QRLLVRVCNASAVKLFSSHRTW** 3043
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA L + KSN
Sbjct: 3042 AGWLVPLIPAWLHKKKSN 2989
Score = 51.0 bits (105), Expect(2) = 8e-055
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +2
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 3257 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 3355
Score = 34.5 bits (69), Expect(2) = 2e-023
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1 / -3
Query: 332 Q*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
Q*N+T T S +AGRG T PP L DV
Sbjct: 3351 Q*NMTFLTLSLSAGRGLTAPPPAARVLRDV 3262
>gb|CA999687.1|CA999687 S234I_A02 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 463
Score = 214 bits (461), Expect = 1e-053
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY
Sbjct: 161 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 340
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 341 YAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 436
Score = 150 bits (323), Expect(2) = 5e-040
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3 / +1
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V*FLPL* CWN GNK*A SLP PLG*EQFH RRNA+ DKQPLLHLC VHTL FCC +CIL
Sbjct: 163 V*FLPL*PCWNSGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHLCTVHTLCFCCSTCIL 342
Query: 183 RTPGSIPGAVLHGTRDVGEPD 245
G + AVLHG RDVGEPD
Sbjct: 343 CASGCVSSAVLHGARDVGEPD 405
Score = 146 bits (314), Expect(2) = 2e-039
Identities = 70/81 (86%), Positives = 71/81 (87%)
Frame = -1 / -2
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRT 66
VWFSDISGSM RCA*YAGGTTETERVHRA*V*QRLFV+VCISSAVKLFSSQRT
Sbjct: 405 VWFSDISGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAVKLFSSQRT 226
Query: 65 W**AGLLVPWIPA*LQR*KSN 3
W**AGLLVP IPA LQR*KSN
Sbjct: 225 W**AGLLVP*IPAWLQR*KSN 163
Score = 133 bits (284), Expect(3) = 4e-036
Identities = 55/75 (73%), Positives = 57/75 (76%)
Frame = -2 / -3
Query: 226 LVPCRTAPGMLPGVRSMQEGQQKPSVCTGHKCSKGCLSVFAFRLL*NCSHPRGHGSERAY 47
L PCRTA P SMQ QQK SVCT HKCSKGCLS+ AFRL *NCSHP+G GSE AY
Sbjct: 386 LAPCRTALETQPDAHSMQVEQQKQSVCTVHKCSKGCLSMSAFRLQ*NCSHPKGRGSELAY 207
Query: 46 LFPGFQHDYRGRNQT 2
LFP FQH YRGRNQT
Sbjct: 206 LFPEFQHGYRGRNQT 162
Score = 124 bits (265), Expect(2) = 3e-028
Identities = 56/75 (74%), Positives = 58/75 (77%)
Frame = +2 / +3
Query: 2 SLISTSVVMLESREQVGPLTTMSSGMRTISQQTKCKH*QTTFATLMPGAHARFLLSLLHT 181
SLISTSV MLE REQVG LTT S GMRTIS QTKC+H*QTTFATLM GAHA FLL LHT
Sbjct: 162 SLISTSVAMLEFREQVGQLTTTSFGMRTISLQTKCRH*QTTFATLMHGAHALFLLFHLHT 341
Query: 182 THTWQHSGRGSTWNQ 226
W RGSTW+Q
Sbjct: 342 MRIWLRFERGSTWSQ 386
Score = 40.0 bits (81), Expect(2) = 2e-039
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 299 TAGRGFTKPPFVPLELFDV 243
TAG GFT+ PFVP+ELFDV
Sbjct: 462 TAGNGFTEVPFVPVELFDV 406
Score = 37.7 bits (76), Expect(2) = 5e-040
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 244 TSKSSNGTNGGLVKPLPAV 300
TSKSS GTNG VKPLPAV
Sbjct: 407 TSKSSTGTNGTSVKPLPAV 463
Score = 31.3 bits (62), Expect(3) = 4e-036
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 300 HSRQGLHQASVRAIGALRR 244
H RQ LH+ SVR GALRR
Sbjct: 463 HRRQWLHRGSVRPSGALRR 407
Score = 29.5 bits (58), Expect(3) = 4e-036
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 409 RRLVLRHLWLH 377
Score = 24.9 bits (48), Expect(2) = 3e-028
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 243 DVEELQWHERRL 278
DVEEL W ER L
Sbjct: 406 DVEELHWDERNL 441
>gb|AU030923.1|AU030923 AU030923 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60443_2Z, mRNA sequence
Length = 714
Score = 148 bits (317), Expect(3) = 1e-050
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +1 / +1
Query: 52 PAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEM 231
PAHYHVLWDENNFTAD +QTLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYME +
Sbjct: 79 PAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMESDS 258
Query: 232 SENQTSKSSNG 264
S++ + G
Sbjct: 259 SDSGSMAXGRG 291
Score = 80.3 bits (169), Expect(3) = 6e-021
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++S SM R A*YAGGT +T+RVH A*V*QRL V VC +SAVKLFSS RTW**
Sbjct: 263 SELSDSM*KRALNAAR*A*YAGGTIDTDRVHLA*V*QRLLVRVCNASAVKLFSSHRTW** 84
Query: 56 AG 51
AG
Sbjct: 83 AG 78
Score = 51.0 bits (105), Expect(3) = 1e-050
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +1
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 298 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 396
Score = 43.2 bits (88), Expect(3) = 1e-050
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRP 54
EFDF+ CSHAGI+GTSRP
Sbjct: 27 EFDFFXCSHAGIKGTSRP 80
Score = 34.5 bits (69), Expect(3) = 6e-021
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
Q*N+T T S +AGRG T PP L DV
Sbjct: 392 Q*NMTFLTLSLSAGRGLTAPPPAARVLRDV 303
Score = 27.2 bits (53), Expect(3) = 6e-021
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3 / -2
Query: 57 SGPTCSLDSSMTTEVEIKL 1
+G C+LDSSM E+KL
Sbjct: 83 AGTACALDSSMAAXEEVKL 27
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 92.3 bits (195), Expect(6) = 3e-049
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1 / +1
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 138
QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY
Sbjct: 628246 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 628347
Score = 79.0 bits (166), Expect(4) = 1e-037
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = -3 / -3
Query: 138 ISVAKVVCQCLHFVCCEIVLIPEDMVVSGPTCSLDSSMTTEVEI 7
+ VAKVVCQCLHFVC EIVLIP+D+VVS PTCSL++S T+ + +
Sbjct: 628347 VRVAKVVCQCLHFVCSEIVLIPKDVVVSWPTCSLENSHTSVISV 628216
Score = 73.0 bits (153), Expect(6) = 3e-049
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1 / +1
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VPPAYYAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 628588 VPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 628698
Score = 67.5 bits (141), Expect(4) = 2e-033
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 36 PGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHL 137
PGNK*A SLP PLG*EQFH RRNA+ DKQPLLH+
Sbjct: 628245 PGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHV 628346
Score = 66.1 bits (138), Expect(4) = 1e-037
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 628760 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 628668
Score = 65.7 bits (137), Expect(4) = 2e-033
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 628669 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 628761
Score = 44.1 bits (90), Expect(6) = 3e-049
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 628679 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 628765
Score = 42.8 bits (87), Expect(4) = 1e-037
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGT 165
VWFSDISGSM RCA*YAGGT
Sbjct: 628667 VWFSDISGSM*NRARNAARCA*YAGGT 628587
Score = 42.3 bits (86), Expect(4) = 2e-033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 171 SCILRTPGSIPGAVLHGTRDVGEPD 245
+CIL G + AVLHG RDVGEPD
Sbjct: 628593 TCILCASGCVSSAVLHGARDVGEPD 628667
Score = 29.0 bits (57), Expect(6) = 3e-049
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 628904 CKVLSNACIIVVV 628942
Score = 28.1 bits (55), Expect(4) = 1e-037
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 166 QQKPSVCTGHKCSKGC 119
QQK SVCT H C C
Sbjct: 628467 QQKQSVCTVHNCISKC 628420
Score = 26.7 bits (52), Expect(6) = 3e-049
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 133 TYARCTRSVSV 165
+YARCTRSVSV
Sbjct: 628434 SYARCTRSVSV 628466
Score = 26.3 bits (51), Expect(4) = 2e-033
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 126 LLHLCPVHTLGFC 164
L+ LC VHTL FC
Sbjct: 628427 LMQLCTVHTLCFC 628465
Score = 24.9 bits (48), Expect(6) = 3e-049
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / +2
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 628763 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 628888
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0417D05
Length = 165752
Score = 92.3 bits (195), Expect(6) = 4e-049
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1 / +3
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 138
QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY
Sbjct: 113409 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 113510
Score = 79.0 bits (166), Expect(4) = 1e-037
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = -3 / -1
Query: 138 ISVAKVVCQCLHFVCCEIVLIPEDMVVSGPTCSLDSSMTTEVEI 7
+ VAKVVCQCLHFVC EIVLIP+D+VVS PTCSL++S T+ + +
Sbjct: 113510 VRVAKVVCQCLHFVCSEIVLIPKDVVVSWPTCSLENSHTSVISV 113379
Score = 73.5 bits (154), Expect(5) = 1e-024
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -1 / -2
Query: 134 V*QRLFVSVCISSAVKLFSSQRTW**AGLLVPW 36
V*QRLFV+VCISSAVKLFSSQRTW**AGLLVPW
Sbjct: 113506 V*QRLFVNVCISSAVKLFSSQRTW**AGLLVPW 113408
Score = 73.0 bits (153), Expect(6) = 4e-049
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1 / +3
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VPPAYYAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 113751 VPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 113861
Score = 67.5 bits (141), Expect(4) = 2e-033
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / +2
Query: 36 PGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHL 137
PGNK*A SLP PLG*EQFH RRNA+ DKQPLLH+
Sbjct: 113408 PGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHV 113509
Score = 66.1 bits (138), Expect(4) = 1e-037
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 113923 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 113831
Score = 65.7 bits (137), Expect(4) = 2e-033
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 113832 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 113924
Score = 58.8 bits (122), Expect(5) = 1e-024
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -1
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 113927 SSTVEHHPLHLLLHRRQWLHRGSVRPSGALRR 113832
Score = 44.1 bits (90), Expect(6) = 4e-049
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +1
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 113842 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 113928
Score = 42.8 bits (87), Expect(4) = 1e-037
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = -1 / -2
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGT 165
VWFSDISGSM RCA*YAGGT
Sbjct: 113830 VWFSDISGSM*NRARNAARCA*YAGGT 113750
Score = 42.3 bits (86), Expect(4) = 2e-033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3 / +2
Query: 171 SCILRTPGSIPGAVLHGTRDVGEPD 245
+CIL G + AVLHG RDVGEPD
Sbjct: 113756 TCILCASGCVSSAVLHGARDVGEPD 113830
Score = 31.3 bits (62), Expect(5) = 1e-024
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 40 PGFQHDYRGRNQT 2
P FQH YRGRNQT
Sbjct: 112845 PEFQHGYRGRNQT 112807
Score = 29.5 bits (58), Expect(5) = 1e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 113834 RRLVLRHLWLH 113802
Score = 29.0 bits (57), Expect(6) = 4e-049
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +1
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 114067 CKVLSNACIIVVV 114105
Score = 28.1 bits (55), Expect(5) = 1e-024
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -1 / -3
Query: 164 TETERVHRA*V*QRLF 117
TETERVHRA*+ Q+++
Sbjct: 113628 TETERVHRA*LHQQMY 113581
Score = 28.1 bits (55), Expect(4) = 1e-037
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -1
Query: 166 QQKPSVCTGHKCSKGC 119
QQK SVCT H C C
Sbjct: 113630 QQKQSVCTVHNCISKC 113583
Score = 26.7 bits (52), Expect(6) = 4e-049
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 133 TYARCTRSVSV 165
+YARCTRSVSV
Sbjct: 113597 SYARCTRSVSV 113629
Score = 26.3 bits (51), Expect(4) = 2e-033
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +1
Query: 126 LLHLCPVHTLGFC 164
L+ LC VHTL FC
Sbjct: 113590 LMQLCTVHTLCFC 113628
Score = 24.9 bits (48), Expect(6) = 4e-049
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / +1
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 113926 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 114051
>dbj|AP003986.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone OJ1057_A09,
*** SEQUENCING IN PROGRESS ***
Length = 105649
Score = 92.3 bits (195), Expect(6) = 4e-049
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1 / -1
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 138
QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY
Sbjct: 55351 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 55250
Score = 79.0 bits (166), Expect(4) = 1e-037
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = -3 / +2
Query: 138 ISVAKVVCQCLHFVCCEIVLIPEDMVVSGPTCSLDSSMTTEVEI 7
+ VAKVVCQCLHFVC EIVLIP+D+VVS PTCSL++S T+ + +
Sbjct: 55250 VRVAKVVCQCLHFVCSEIVLIPKDVVVSWPTCSLENSHTSVISV 55381
Score = 73.5 bits (154), Expect(5) = 2e-025
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -1 / +3
Query: 134 V*QRLFVSVCISSAVKLFSSQRTW**AGLLVPW 36
V*QRLFV+VCISSAVKLFSSQRTW**AGLLVPW
Sbjct: 55254 V*QRLFVNVCISSAVKLFSSQRTW**AGLLVPW 55352
Score = 73.0 bits (153), Expect(6) = 4e-049
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1 / -1
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VPPAYYAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 55009 VPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 54899
Score = 67.5 bits (141), Expect(4) = 2e-033
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / -3
Query: 36 PGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHL 137
PGNK*A SLP PLG*EQFH RRNA+ DKQPLLH+
Sbjct: 55352 PGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHV 55251
Score = 66.1 bits (138), Expect(4) = 1e-037
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / +3
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 54837 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 54929
Score = 65.7 bits (137), Expect(4) = 2e-033
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / -1
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 54928 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 54836
Score = 58.8 bits (122), Expect(5) = 2e-025
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / +2
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 54833 SSTVEHHPLHLLLHRRQWLHRGSVRPSGALRR 54928
Score = 44.1 bits (90), Expect(6) = 4e-049
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / -2
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 54918 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 54832
Score = 42.8 bits (87), Expect(4) = 1e-037
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGT 165
VWFSDISGSM RCA*YAGGT
Sbjct: 54930 VWFSDISGSM*NRARNAARCA*YAGGT 55010
Score = 42.3 bits (86), Expect(4) = 2e-033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3 / -3
Query: 171 SCILRTPGSIPGAVLHGTRDVGEPD 245
+CIL G + AVLHG RDVGEPD
Sbjct: 55004 TCILCASGCVSSAVLHGARDVGEPD 54930
Score = 31.3 bits (62), Expect(5) = 2e-025
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 40 PGFQHDYRGRNQT 2
P FQH YRGRNQT
Sbjct: 55915 PEFQHGYRGRNQT 55953
Score = 29.5 bits (58), Expect(5) = 2e-025
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 54926 RRLVLRHLWLH 54958
Score = 29.0 bits (57), Expect(6) = 4e-049
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / -2
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 54693 CKVLSNACIIVVV 54655
Score = 28.1 bits (55), Expect(5) = 2e-025
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -1 / +1
Query: 164 TETERVHRA*V*QRLF 117
TETERVHRA*+ Q+++
Sbjct: 55132 TETERVHRA*LHQQMY 55179
Score = 28.1 bits (55), Expect(4) = 1e-037
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 166 QQKPSVCTGHKCSKGC 119
QQK SVCT H C C
Sbjct: 55130 QQKQSVCTVHNCISKC 55177
Score = 26.7 bits (52), Expect(6) = 4e-049
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 133 TYARCTRSVSV 165
+YARCTRSVSV
Sbjct: 55163 SYARCTRSVSV 55131
Score = 26.3 bits (51), Expect(4) = 2e-033
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / -2
Query: 126 LLHLCPVHTLGFC 164
L+ LC VHTL FC
Sbjct: 55170 LMQLCTVHTLCFC 55132
Score = 24.9 bits (48), Expect(6) = 4e-049
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / -2
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 54834 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 54709
>gb|AACV01014478.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014478, whole
genome shotgun sequence
Length = 23138
Score = 92.3 bits (195), Expect(6) = 4e-049
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1 / +1
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 138
QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY
Sbjct: 4792 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 4893
Score = 79.0 bits (166), Expect(4) = 1e-037
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = -3 / -3
Query: 138 ISVAKVVCQCLHFVCCEIVLIPEDMVVSGPTCSLDSSMTTEVEI 7
+ VAKVVCQCLHFVC EIVLIP+D+VVS PTCSL++S T+ + +
Sbjct: 4893 VRVAKVVCQCLHFVCSEIVLIPKDVVVSWPTCSLENSHTSVISV 4762
Score = 73.5 bits (154), Expect(5) = 8e-028
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -1 / -1
Query: 134 V*QRLFVSVCISSAVKLFSSQRTW**AGLLVPW 36
V*QRLFV+VCISSAVKLFSSQRTW**AGLLVPW
Sbjct: 4889 V*QRLFVNVCISSAVKLFSSQRTW**AGLLVPW 4791
Score = 73.0 bits (153), Expect(6) = 4e-049
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1 / +1
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VPPAYYAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 5134 VPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 5244
Score = 67.5 bits (141), Expect(4) = 2e-033
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 36 PGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHL 137
PGNK*A SLP PLG*EQFH RRNA+ DKQPLLH+
Sbjct: 4791 PGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHV 4892
Score = 66.1 bits (138), Expect(4) = 1e-037
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 5306 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 5214
Score = 65.7 bits (137), Expect(4) = 2e-033
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 5215 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 5307
Score = 58.8 bits (122), Expect(5) = 8e-028
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -3 / -3
Query: 339 SSAVEHHPFHLLLHSRQGLHQASVRAIGALRR 244
SS VEHHP HLLLH RQ LH+ SVR GALRR
Sbjct: 5310 SSTVEHHPLHLLLHRRQWLHRGSVRPSGALRR 5215
Score = 44.1 bits (90), Expect(6) = 4e-049
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 5225 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 5311
Score = 42.8 bits (87), Expect(4) = 1e-037
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGT 165
VWFSDISGSM RCA*YAGGT
Sbjct: 5213 VWFSDISGSM*NRARNAARCA*YAGGT 5133
Score = 42.3 bits (86), Expect(4) = 2e-033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 171 SCILRTPGSIPGAVLHGTRDVGEPD 245
+CIL G + AVLHG RDVGEPD
Sbjct: 5139 TCILCASGCVSSAVLHGARDVGEPD 5213
Score = 31.3 bits (62), Expect(5) = 8e-028
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 40 PGFQHDYRGRNQT 2
P FQH YRGRNQT
Sbjct: 4228 PEFQHGYRGRNQT 4190
Score = 29.5 bits (58), Expect(5) = 8e-028
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -3
Query: 249 RRLVLRHLWFH 217
RRLVLRHLW H
Sbjct: 5217 RRLVLRHLWLH 5185
Score = 29.0 bits (57), Expect(6) = 4e-049
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 479 CKILGNACIIVLV 517
CK+L NACIIV+V
Sbjct: 5450 CKVLSNACIIVVV 5488
Score = 28.1 bits (55), Expect(5) = 8e-028
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -1 / -2
Query: 164 TETERVHRA*V*QRLF 117
TETERVHRA*+ Q+++
Sbjct: 5011 TETERVHRA*LHQQMY 4964
Score = 28.1 bits (55), Expect(4) = 1e-037
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 166 QQKPSVCTGHKCSKGC 119
QQK SVCT H C C
Sbjct: 5013 QQKQSVCTVHNCISKC 4966
Score = 26.7 bits (52), Expect(6) = 4e-049
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 133 TYARCTRSVSV 165
+YARCTRSVSV
Sbjct: 4980 SYARCTRSVSV 5012
Score = 26.3 bits (51), Expect(4) = 2e-033
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 126 LLHLCPVHTLGFC 164
L+ LC VHTL FC
Sbjct: 4973 LMQLCTVHTLCFC 5011
Score = 24.9 bits (48), Expect(6) = 4e-049
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2 / +2
Query: 335 DEVTALTTIHML*LTW*GSVGD*ISFLQERRGNGMRIWIMNN 460
D T HM+ LT * G + R+G+ IWI+++
Sbjct: 5309 DWETTFNYSHMMYLTL*NFSGRDLELASFRKGSRASIWILSD 5434
>gb|CB653344.1|CB653344 OSJNEc04E11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04E11 3', mRNA sequence
Length = 825
Score = 196 bits (423), Expect = 2e-048
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 611 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAY 432
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEP+ S++ + S T GG
Sbjct: 431 YAHLAAFRARFYMEPDTSDSGSMASGAHTRGG 336
>gb|CB665755.1|CB665755 OSJNEd12F14.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12F14 3', mRNA sequence
Length = 720
Score = 196 bits (423), Expect = 2e-048
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 620 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAY 441
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEP+ S++ + S T GG
Sbjct: 440 YAHLAAFRARFYMEPDTSDSGSMASGAHTRGG 345
>dbj|AK111553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050D21, full
insert sequence
Length = 3747
Score = 196 bits (423), Expect = 2e-048
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 3057 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAY 3236
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEP+ S++ + S T GG
Sbjct: 3237 YAHLAAFRARFYMEPDTSDSGSMASGAHTRGG 3332
>dbj|AK112025.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C05, full
insert sequence
Length = 2043
Score = 196 bits (423), Expect = 2e-048
Identities = 76/92 (82%), Positives = 82/92 (89%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +QTLTNNLCYTYARCTRSVS+VPPAY
Sbjct: 1496 EFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAY 1675
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEP+ S++ + S T GG
Sbjct: 1676 YAHLAAFRARFYMEPDTSDSGSMASGAHTRGG 1771
>gb|C29031.1|C29031 C29031 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C63231_1A, mRNA sequence
Length = 334
Score = 194 bits (419), Expect = 6e-048
Identities = 75/93 (80%), Positives = 82/93 (88%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGI+GTSRPAHYHVLWDENNFTAD +Q LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 55 EFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAY 234
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEP+ S++ + S G G L
Sbjct: 235 YAHLAAFRARFYMEPDTSDSSSVVSGPGXRGPL 333
>dbj|AK103279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124L10, full
insert sequence
Length = 3432
Score = 194 bits (419), Expect = 6e-048
Identities = 75/93 (80%), Positives = 82/93 (88%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGI+GTSRPAHYHVLWDENNFTAD +Q LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2799 EFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAY 2978
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEP+ S++ + S G G L
Sbjct: 2979 YAHLAAFRARFYMEPDTSDSSSVVSGPGVRGPL 3077
Score = 93.2 bits (197), Expect(2) = 3e-022
Identities = 53/90 (58%), Positives = 60/90 (66%)
Frame = -1 / -3
Query: 272 PFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSA 93
P P L SD+SGS+ R A* AGGT +TERVH A*V*QRL V +C +SA
Sbjct: 3070 PRTPGPLTTELLSDVSGSI*KRARKAAR*A**AGGTIDTERVHLA*V*QRLLVRICNASA 2891
Query: 92 VKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
VKLFSS +T **AG LVP +PA L R*KSN
Sbjct: 2890 VKLFSSHKT***AGRLVPLMPAWLHR*KSN 2801
Score = 79.9 bits (168), Expect(2) = 6e-021
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +3 / +2
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V* LP+* CW+ G + SL C +G*+Q HS A++ +QPLLHLC VH+L C +C+L
Sbjct: 2801 V*LLPV*PCWH*GY*SSSSLSCLVG*KQLHS*CIADSYQQPLLHLCKVHSLCINCSTCLL 2980
Query: 183 RTPGSIPGAVLHGTR 227
+ G +P + L+GTR
Sbjct: 2981 CSSGCLPCSFLYGTR 3025
Score = 44.6 bits (91), Expect(2) = 6e-021
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
++ + G VKPLPA+K+ VKRVMFYC*
Sbjct: 3087 STSRTRAPGGAAVKPLPALKDSVKRVMFYC* 3179
Score = 35.9 bits (72), Expect(2) = 3e-022
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 335 QQ*NITLFTFSFTAGRGFTKPP 270
QQ*N+TLFT SF AG G T P
Sbjct: 3178 QQ*NMTLFTLSFRAGSGLTAAP 3113
>ref|XM_468547.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3430
Score = 194 bits (419), Expect = 6e-048
Identities = 75/93 (80%), Positives = 82/93 (88%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGI+GTSRPAHYHVLWDENNFTAD +Q LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2799 EFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAY 2978
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEP+ S++ + S G G L
Sbjct: 2979 YAHLAAFRARFYMEPDTSDSSSVVSGPGVRGPL 3077
Score = 93.2 bits (197), Expect(2) = 3e-022
Identities = 53/90 (58%), Positives = 60/90 (66%)
Frame = -1 / -1
Query: 272 PFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSA 93
P P L SD+SGS+ R A* AGGT +TERVH A*V*QRL V +C +SA
Sbjct: 3070 PRTPGPLTTELLSDVSGSI*KRARKAAR*A**AGGTIDTERVHLA*V*QRLLVRICNASA 2891
Query: 92 VKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
VKLFSS +T **AG LVP +PA L R*KSN
Sbjct: 2890 VKLFSSHKT***AGRLVPLMPAWLHR*KSN 2801
Score = 79.9 bits (168), Expect(2) = 6e-021
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +3 / +2
Query: 3 V*FLPL*SCWNPGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHLCPVHTLGFCCPSCIL 182
V* LP+* CW+ G + SL C +G*+Q HS A++ +QPLLHLC VH+L C +C+L
Sbjct: 2801 V*LLPV*PCWH*GY*SSSSLSCLVG*KQLHS*CIADSYQQPLLHLCKVHSLCINCSTCLL 2980
Query: 183 RTPGSIPGAVLHGTR 227
+ G +P + L+GTR
Sbjct: 2981 CSSGCLPCSFLYGTR 3025
Score = 44.6 bits (91), Expect(2) = 6e-021
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
++ + G VKPLPA+K+ VKRVMFYC*
Sbjct: 3087 STSRTRAPGGAAVKPLPALKDSVKRVMFYC* 3179
Score = 35.9 bits (72), Expect(2) = 3e-022
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFTKPP 270
QQ*N+TLFT SF AG G T P
Sbjct: 3178 QQ*NMTLFTLSFRAGSGLTAAP 3113
>ref|XM_469311.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3168
Score = 194 bits (418), Expect = 8e-048
Identities = 78/112 (69%), Positives = 87/112 (77%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH+GI+GTSRP HYHVL DEN F AD +QTLT NL YTYARCTR+VS+VPPAY
Sbjct: 2833 EFDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAY 3012
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
YAHL AFRAR+YME E S+ +S S KPLP +KE VKR MFYC*
Sbjct: 3013 YAHLGAFRARYYMEDEHSDQGSSSSVTTRTDRSTKPLPEIKENVKRFMFYC* 3168
>ref|NM_185035.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3177
Score = 180 bits (388), Expect(2) = 1e-047
Identities = 69/88 (78%), Positives = 80/88 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRP HYHVL+DEN+FTAD +Q+LTNNLCYTYARCTR+VSVVPPAY
Sbjct: 2827 EFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAY 3006
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNG 264
YAHLAAFRAR+Y+E E S+ ++ S+G
Sbjct: 3007 YAHLAAFRARYYVEGESSDGGSTPGSSG 3090
Score = 33.6 bits (67), Expect(2) = 1e-047
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+ LP +KE VK VMFYC*
Sbjct: 3121 VRQLPKIKENVKDVMFYC* 3177
>dbj|AB081951.1| Oryza sativa (japonica cultivar-group) OsAGO1 mRNA for AGO1
homologous protein, complete cds
Length = 3306
Score = 192 bits (414), Expect = 3e-047
Identities = 74/93 (79%), Positives = 82/93 (88%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGI+GTSRPAHYHVLW+ENNFTAD +Q LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 2650 EFDFYLCSHAGIKGTSRPAHYHVLWNENNFTADALQILTNNLCYTYARCTRSVSIVPPAY 2829
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGL 279
YAHLAAFRARFYMEP+ S++ + S G G L
Sbjct: 2830 YAHLAAFRARFYMEPDTSDSSSVVSGPGVRGPL 2928
Score = 90.4 bits (191), Expect(2) = 2e-021
Identities = 52/90 (57%), Positives = 59/90 (65%)
Frame = -1 / -2
Query: 272 PFVPLELFDVWFSDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSA 93
P P L SD+SGS+ R A* AGGT +TERVH A*V*QRL V +C +SA
Sbjct: 2921 PRTPGPLTTELLSDVSGSI*KRARKAAR*A**AGGTIDTERVHLA*V*QRLLVRICNASA 2742
Query: 92 VKLFSSQRTW**AGLLVPWIPA*LQR*KSN 3
VKLFS +T **AG LVP +PA L R*KSN
Sbjct: 2741 VKLFSFHKT***AGRLVPLMPAWLHR*KSN 2652
Score = 35.9 bits (72), Expect(2) = 2e-021
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFTKPP 270
QQ*N+TLFT SF AG G T P
Sbjct: 3029 QQ*NMTLFTLSFRAGSGLTAAP 2964
>gb|CF312778.1|CF312778 ABF--08-K18.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--08-K18, mRNA sequence
Length = 661
Score = 162 bits (348), Expect(2) = 3e-046
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +1 / -3
Query: 10 FYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAH 189
FYLCSHAGIQGT RPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAYYAH
Sbjct: 611 FYLCSHAGIQGTGRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAH 432
Query: 190 LAAFR 204
LAAFR
Sbjct: 431 LAAFR 417
Score = 47.3 bits (97), Expect(2) = 3e-046
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1 / -2
Query: 187 HLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
HL + R ++ ++ +Q +S+ V+PLPA+KE VKRVMFYC*
Sbjct: 390 HLTVDQWRVELQRAVAFHQCVRSARVAGNVAVRPLPALKENVKRVMFYC* 241
>gb|AU183854.1|AU183854 AU183854 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50133, mRNA sequence
Length = 445
Score = 161 bits (347), Expect(2) = 2e-044
Identities = 63/78 (80%), Positives = 69/78 (88%)
Frame = +1 / +3
Query: 46 SRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEP 225
SRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEP
Sbjct: 3 SRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 182
Query: 226 EMSENQTSKSSNGTNGGL 279
E S++ + S T+ GL
Sbjct: 183 ETSDSGSMASGAATSRGL 236
Score = 41.8 bits (85), Expect(2) = 2e-044
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KE VKRVMFYC*
Sbjct: 279 VRPLPALKENVKRVMFYC* 335
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 92.3 bits (195), Expect(4) = 2e-043
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +1 / +1
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 138
QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY
Sbjct: 4503856 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTY 4503957
Score = 82.6 bits (174), Expect(5) = 4e-044
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1 / +3
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVLWDENNFTAD +QTLTNNLCYT
Sbjct: 11891133 GTSRPAHYHVLWDENNFTADALQTLTNNLCYT 11891228
Score = 79.0 bits (166), Expect(4) = 1e-037
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = -3 / -3
Query: 138 ISVAKVVCQCLHFVCCEIVLIPEDMVVSGPTCSLDSSMTTEVEI 7
+ VAKVVCQCLHFVC EIVLIP+D+VVS PTCSL++S T+ + +
Sbjct: 4503957 VRVAKVVCQCLHFVCSEIVLIPKDVVVSWPTCSLENSHTSVISV 4503826
Score = 73.0 bits (153), Expect(4) = 2e-043
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1 / +1
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
VPPAYYAHLAAFRARFYMEPEMSENQT+ S+ G
Sbjct: 4504198 VPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTNG 4504308
Score = 67.5 bits (141), Expect(4) = 2e-033
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 36 PGNK*ARSLPCPLG*EQFHSRRNANTDKQPLLHL 137
PGNK*A SLP PLG*EQFH RRNA+ DKQPLLH+
Sbjct: 4503855 PGNK*ASSLPRPLG*EQFHCRRNADIDKQPLLHV 4503956
Score = 66.1 bits (138), Expect(4) = 1e-037
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFTKPPFVPLELFDV 243
QQ*NITLFTFSFTAG GFT+ PFVP+ELFDV
Sbjct: 4504370 QQ*NITLFTFSFTAGNGFTEVPFVPVELFDV 4504278
Score = 65.7 bits (137), Expect(4) = 2e-033
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1 / +1
Query: 244 TSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
TSKSS GTNG VKPLPAVKEKVKRVMFYC*
Sbjct: 4504279 TSKSSTGTNGTSVKPLPAVKEKVKRVMFYC* 4504371
Score = 57.0 bits (118), Expect(5) = 4e-044
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 148 TRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNG 264
T VPPAYYAHLAAFRARFYME + S++ + S G
Sbjct: 11891447 TNFAVAVPPAYYAHLAAFRARFYMESDSSDSGSMASGRG 11891563
Score = 51.0 bits (105), Expect(5) = 4e-044
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +2
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 11891570 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 11891668
Score = 44.1 bits (90), Expect(4) = 2e-043
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 254 APMARTEAW*SPCLL*RRR*KG*CSTADE 340
AP+ RTE *S CL *RRR*+G*CST D+
Sbjct: 4504289 APLGRTEPR*SHCLR*RRR*RG*CSTVDD 4504375
Score = 42.8 bits (87), Expect(4) = 1e-037
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 245 VWFSDISGSMXXXXXXXXRCA*YAGGT 165
VWFSDISGSM RCA*YAGGT
Sbjct: 4504277 VWFSDISGSM*NRARNAARCA*YAGGT 4504197
Score = 42.3 bits (86), Expect(4) = 2e-033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 171 SCILRTPGSIPGAVLHGTRDVGEPD 245
+CIL G + AVLHG RDVGEPD
Sbjct: 4504203 TCILCASGCVSSAVLHGARDVGEPD 4504277
Score = 35.0 bits (70), Expect(5) = 4e-044
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAH 60
EFDF+LCSHAGI+ + H
Sbjct: 11891006 EFDFFLCSHAGIKVNNNERH 11891065
Score = 29.9 bits (59), Expect(5) = 4e-044
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 118 NNLCYTYARCTRSVSV 165
N+L +YARCTRSVS+
Sbjct: 11891305 NHLLCSYARCTRSVSI 11891352
Score = 28.1 bits (55), Expect(4) = 1e-037
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 166 QQKPSVCTGHKCSKGC 119
QQK SVCT H C C
Sbjct: 4504077 QQKQSVCTVHNCISKC 4504030
Score = 26.7 bits (52), Expect(4) = 2e-043
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 133 TYARCTRSVSV 165
+YARCTRSVSV
Sbjct: 4504044 SYARCTRSVSV 4504076
Score = 26.3 bits (51), Expect(4) = 2e-033
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 126 LLHLCPVHTLGFC 164
L+ LC VHTL FC
Sbjct: 4504037 LMQLCTVHTLCFC 4504075
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 82.6 bits (174), Expect(5) = 4e-044
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1 / +1
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVLWDENNFTAD +QTLTNNLCYT
Sbjct: 198001 GTSRPAHYHVLWDENNFTADALQTLTNNLCYT 198096
Score = 57.0 bits (118), Expect(5) = 4e-044
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +3
Query: 148 TRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNG 264
T VPPAYYAHLAAFRARFYME + S++ + S G
Sbjct: 198315 TNFAVAVPPAYYAHLAAFRARFYMESDSSDSGSMASGRG 198431
Score = 51.0 bits (105), Expect(5) = 4e-044
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +3
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 198438 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 198536
Score = 35.0 bits (70), Expect(5) = 4e-044
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAH 60
EFDF+LCSHAGI+ + H
Sbjct: 197874 EFDFFLCSHAGIKVNNNERH 197933
Score = 29.9 bits (59), Expect(5) = 4e-044
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 118 NNLCYTYARCTRSVSV 165
N+L +YARCTRSVS+
Sbjct: 198173 NHLLCSYARCTRSVSI 198220
>dbj|AP004813.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0459E03,
*** SEQUENCING IN PROGRESS ***
Length = 159290
Score = 82.6 bits (174), Expect(5) = 4e-044
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1 / +1
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVLWDENNFTAD +QTLTNNLCYT
Sbjct: 3184 GTSRPAHYHVLWDENNFTADALQTLTNNLCYT 3279
Score = 57.0 bits (118), Expect(5) = 4e-044
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +3
Query: 148 TRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNG 264
T VPPAYYAHLAAFRARFYME + S++ + S G
Sbjct: 3498 TNFAVAVPPAYYAHLAAFRARFYMESDSSDSGSMASGRG 3614
Score = 51.0 bits (105), Expect(5) = 4e-044
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +3
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 3621 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 3719
Score = 35.0 bits (70), Expect(5) = 4e-044
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAH 60
EFDF+LCSHAGI+ + H
Sbjct: 3057 EFDFFLCSHAGIKVNNNERH 3116
Score = 29.9 bits (59), Expect(5) = 4e-044
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 118 NNLCYTYARCTRSVSV 165
N+L +YARCTRSVS+
Sbjct: 3356 NHLLCSYARCTRSVSI 3403
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0069C14
Length = 150579
Score = 82.6 bits (174), Expect(5) = 4e-044
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1 / +1
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVLWDENNFTAD +QTLTNNLCYT
Sbjct: 59203 GTSRPAHYHVLWDENNFTADALQTLTNNLCYT 59298
Score = 57.0 bits (118), Expect(5) = 4e-044
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +3
Query: 148 TRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNG 264
T VPPAYYAHLAAFRARFYME + S++ + S G
Sbjct: 59517 TNFAVAVPPAYYAHLAAFRARFYMESDSSDSGSMASGRG 59633
Score = 51.0 bits (105), Expect(5) = 4e-044
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +3
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 59640 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 59738
Score = 35.0 bits (70), Expect(5) = 4e-044
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAH 60
EFDF+LCSHAGI+ + H
Sbjct: 59076 EFDFFLCSHAGIKVNNNERH 59135
Score = 29.9 bits (59), Expect(5) = 4e-044
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 118 NNLCYTYARCTRSVSV 165
N+L +YARCTRSVS+
Sbjct: 59375 NHLLCSYARCTRSVSI 59422
>gb|AACV01014978.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014978, whole
genome shotgun sequence
Length = 24257
Score = 82.6 bits (174), Expect(5) = 5e-044
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1 / -1
Query: 40 GTSRPAHYHVLWDENNFTADEMQTLTNNLCYT 135
GTSRPAHYHVLWDENNFTAD +QTLTNNLCYT
Sbjct: 12035 GTSRPAHYHVLWDENNFTADALQTLTNNLCYT 11940
Score = 57.0 bits (118), Expect(5) = 5e-044
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / -3
Query: 148 TRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNG 264
T VPPAYYAHLAAFRARFYME + S++ + S G
Sbjct: 11721 TNFAVAVPPAYYAHLAAFRARFYMESDSSDSGSMASGRG 11605
Score = 51.0 bits (105), Expect(5) = 5e-044
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / -3
Query: 238 NQTSKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
+ TS+S+ GG V+PLPA+K+ VK VMFYC*
Sbjct: 11598 SSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC* 11500
Score = 35.0 bits (70), Expect(5) = 5e-044
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAH 60
EFDF+LCSHAGI+ + H
Sbjct: 12162 EFDFFLCSHAGIKVNNNERH 12103
Score = 29.9 bits (59), Expect(5) = 5e-044
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 118 NNLCYTYARCTRSVSV 165
N+L +YARCTRSVS+
Sbjct: 11863 NHLLCSYARCTRSVSI 11816
>dbj|AK100285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075D23, full
insert sequence
Length = 3414
Score = 176 bits (378), Expect = 3e-042
Identities = 71/101 (70%), Positives = 78/101 (77%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRP HYHVL DEN F+AD++Q LT NLCYTYARCTRSVSVVPPAY
Sbjct: 2893 EFDFYLCSHAGIQGTSRPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAY 3072
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVK 303
YAHLAAFRAR+Y EP + +S S G PAV+
Sbjct: 3073 YAHLAAFRARYYDEPPAMDGASSVGSGGNQAAAGGQPPAVR 3195
>ref|XM_476934.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3414
Score = 176 bits (378), Expect = 3e-042
Identities = 71/101 (70%), Positives = 78/101 (77%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRP HYHVL DEN F+AD++Q LT NLCYTYARCTRSVSVVPPAY
Sbjct: 2893 EFDFYLCSHAGIQGTSRPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAY 3072
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVK 303
YAHLAAFRAR+Y EP + +S S G PAV+
Sbjct: 3073 YAHLAAFRARYYDEPPAMDGASSVGSGGNQAAAGGQPPAVR 3195
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 155 bits (333), Expect(2) = 6e-040
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G +GTSRP HYHVLWDENNF +DE+Q L +NLCYT+ARCTR VS+VPPAY
Sbjct: 5712414 EFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAY 5712593
Query: 181 YAHLAAFRARFYME 222
YAHLAA+R R Y+E
Sbjct: 5712594 YAHLAAYRGRLYLE 5712635
Score = 32.7 bits (65), Expect(2) = 6e-040
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP +++ VKR+MFYC*
Sbjct: 5712681 PLPKLRDNVKRLMFYC* 5712731
>ref|NT_107184.1| Oryza sativa (japonica cultivar-group)
Length = 1122777
Score = 155 bits (333), Expect(2) = 7e-040
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G +GTSRP HYHVLWDENNF +DE+Q L +NLCYT+ARCTR VS+VPPAY
Sbjct: 826244 EFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAY 826423
Query: 181 YAHLAAFRARFYME 222
YAHLAA+R R Y+E
Sbjct: 826424 YAHLAAYRGRLYLE 826465
Score = 32.7 bits (65), Expect(2) = 7e-040
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP +++ VKR+MFYC*
Sbjct: 826511 PLPKLRDNVKRLMFYC* 826561
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete
sequence
Length = 171437
Score = 155 bits (333), Expect(2) = 7e-040
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = +1 / -3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G +GTSRP HYHVLWDENNF +DE+Q L +NLCYT+ARCTR VS+VPPAY
Sbjct: 97764 EFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAY 97585
Query: 181 YAHLAAFRARFYME 222
YAHLAA+R R Y+E
Sbjct: 97584 YAHLAAYRGRLYLE 97543
Score = 32.7 bits (65), Expect(2) = 7e-040
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1 / -3
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP +++ VKR+MFYC*
Sbjct: 97497 PLPKLRDNVKRLMFYC* 97447
>gb|AACV01007049.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007049, whole
genome shotgun sequence
Length = 9695
Score = 155 bits (333), Expect(2) = 7e-040
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G +GTSRP HYHVLWDENNF +DE+Q L +NLCYT+ARCTR VS+VPPAY
Sbjct: 4401 EFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAY 4580
Query: 181 YAHLAAFRARFYME 222
YAHLAA+R R Y+E
Sbjct: 4581 YAHLAAYRGRLYLE 4622
Score = 32.7 bits (65), Expect(2) = 7e-040
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP +++ VKR+MFYC*
Sbjct: 4668 PLPKLRDNVKRLMFYC* 4718
>ref|XM_468898.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3165
Score = 155 bits (333), Expect(2) = 7e-040
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G +GTSRP HYHVLWDENNF +DE+Q L +NLCYT+ARCTR VS+VPPAY
Sbjct: 2848 EFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAY 3027
Query: 181 YAHLAAFRARFYME 222
YAHLAA+R R Y+E
Sbjct: 3028 YAHLAAYRGRLYLE 3069
Score = 32.7 bits (65), Expect(2) = 7e-040
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 286 PLPAVKEKVKRVMFYC* 336
PLP +++ VKR+MFYC*
Sbjct: 3115 PLPKLRDNVKRLMFYC* 3165
>gb|CB667383.1|CB667383 OSJNEd14L01.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14L01 5', mRNA sequence
Length = 338
Score = 159 bits (341), Expect(2) = 4e-038
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +1 / +2
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFY 216
+ T RPAHYHVLWDEN FTA E+QTLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFY
Sbjct: 20 RATRRPAHYHVLWDENKFTAHELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY 199
Query: 217 MEPEMSENQTSKSSNGTNGGL 279
MEPE S++ + S T+ GL
Sbjct: 200 MEPETSDSGSMASGAATSRGL 262
Score = 22.6 bits (43), Expect(2) = 4e-038
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKV 312
V+PLPA+KE V
Sbjct: 305 VRPLPALKENV 337
>gb|AU029884.1|AU029884 AU029884 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50118_1A, mRNA sequence
Length = 328
Score = 161 bits (347), Expect(2) = 7e-038
Identities = 63/78 (80%), Positives = 69/78 (88%)
Frame = +1 / +3
Query: 46 SRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEP 225
SRPAHYHVLWDEN FTADE+QTLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEP
Sbjct: 3 SRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 182
Query: 226 EMSENQTSKSSNGTNGGL 279
E S++ + S T+ GL
Sbjct: 183 ETSDSGSMASGAATSRGL 236
Score = 18.9 bits (35), Expect(2) = 7e-038
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1 / +2
Query: 298 VKEKVKRVMFYC* 336
+ K + VMFYC*
Sbjct: 290 LSRKREXVMFYC* 328
>gb|CF326855.1|CF326855 NACL--01-B17.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--01-B17, mRNA sequence
Length = 533
Score = 147 bits (315), Expect(2) = 1e-037
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = +1 / -2
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFY 216
QGTSRP HYHVL+DEN+FTAD +Q+LTNNLCYTYARCTR+VSVVPPAYY HLAAFRAR+Y
Sbjct: 532 QGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYVHLAAFRARYY 353
Query: 217 MEPEMSENQTSKSSNG 264
+E E S+ ++ S+G
Sbjct: 352 VEGESSDGGSTPGSSG 305
Score = 33.6 bits (67), Expect(2) = 1e-037
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+ LP +KE VK VMFYC*
Sbjct: 274 VRQLPKIKENVKDVMFYC* 218
>ref|XM_469312.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2688
Score = 159 bits (342), Expect = 2e-037
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH+GIQGTS P HY+VL+DENNF+AD +QTLT +LCYTYARCTRSVS+VPP Y
Sbjct: 2332 EFDFYLCSHSGIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVY 2511
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNG 273
YAHLAA RAR Y+E + S S++ G
Sbjct: 2512 YAHLAASRARHYLEEGSLPDHGSSSASAAGG 2604
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,451,033,255
Number of Sequences: 438736
Number of extensions: 68249332
Number of successful extensions: 311835
Number of sequences better than 1.0e-020: 127
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 138928072401
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)